RPSBLAST alignment for GI: 254780806 and conserved domain: TIGR01005
>gnl|CDD|130078 TIGR01005, eps_transp_fam, exopolysaccharide transport protein family. The model describes the exopolysaccharide transport protein family in bacteria. The transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed atleast seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export. Length = 754
Score = 43.5 bits (102), Expect = 6e-05
Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 25/198 (12%)
Query: 1 MEEKKSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDR 60
+ ++ + +GK+ N + +A+ G+ LLID D + A + + +
Sbjct: 541 KSVAEPEVVETQRPRPVLGKSDIEANAAALIASGGKRALLIDADGRKAALSQILVA--RE 598
Query: 61 KYSSYDLLIEEKNINQILIQTAIPNLSIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQL 120
DLL +++ L + +L ++ S + GI +L +F +L +
Sbjct: 599 VSGLLDLLAGLRSLLLDLTASGAASLPMLDSGLFPHGITELLASP--AMF----SLVIHA 652
Query: 121 TSDFSYIFLDCPPSFNLLTMNAMAAAD--SILVPLQCEFFALEGLSQLLETVEEVRRTVN 178
+ +D + M AA +I++ L + VE R
Sbjct: 653 RLYSDCVVVDVGT---ADPVRDMRAAARLAIIMLLVTAY----DRV----VVECGRADAQ 701
Query: 179 S----ALDIQGIILTMFD 192
++ G+ L M D
Sbjct: 702 GISRLNGEVTGVFLNMLD 719