RPSBLAST alignment for GI: 254780806 and conserved domain: COG4963

>gnl|CDD|34570 COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion]. Length = 366

 Score = 48.8 bits (116), Expect = 1e-06
 Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 16/179 (8%)

Query: 4   KKSRIITIANQKGGVGKTTTAINLSTALAA-IGENVLLIDLD-PQGNASTGLGIELYDRK 61
           ++ R +     KGGVG +T A NL+  LA   G  VLL+DLD   G A+  L  +     
Sbjct: 102 QQGRELAFLGAKGGVGTSTLAHNLAKGLAILSGAAVLLVDLDLQGGTAALYLDQDP---A 158

Query: 62  YSSYDLLIEEKNINQILIQTA----IPNLSIIPSTMDLLGIEMILGGEKDRLFRLDKALS 117
           +   + + + + ++Q+L+ +        L ++ +  +L     +  G  +R       L 
Sbjct: 159 FGIAEAVKQPERLDQVLLDSLLTRLASGLKLLAAPTELAKNYDLKTGAVER-------LL 211

Query: 118 VQLTSDFSYIFLDCPPSFNLLTMNAMAAADSILVPLQCEFFALEGLSQLLETVEEVRRT 176
             L   F ++ +D P  +   T   ++ +D I++  +    +L    +LL+ ++ +R  
Sbjct: 212 DLLRGSFDFVVVDLPNIWTDWTRQVLSGSDEIVIVAEPSLASLRNAKELLDELKRLRPN 270