HHsearch alignment for GI: 254780807 and conserved domain: PRK03522
>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed.
Probab=95.68 E-value=0.065 Score=31.86 Aligned_cols=72 Identities=13% Similarity=0.015 Sum_probs=56.8
Q ss_pred CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHH-HCCCCCCEEEE
Q ss_conf 3443111114677335656522755466347875000038999999999738980-99804266533-12479869999
Q gi|254780807|r 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-QMITTCDVISA 147 (168)
Q Consensus 71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~-~~~~~~d~v~s 147 (168)
T Consensus 233 ~~~~vlDlycG~G~~sl~lA~~-----~~~V~gvE~~~~av~~A~~na~~ngi~nv~f~~~d~~~~~~~~~~~~d~vvv 306 (375)
T PRK03522 233 PPKSMWDLFCGVGGFGLHCATP-----DMQLTGIEISAEAIACAKQSAAELGLTNVQFQALDSTQFATAQGEVPELVLV 306 (375)
T ss_pred CCCEEEEECCCCCHHHHHHHHC-----CCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCEEEE
T ss_conf 8978999657853888987641-----7889999845999999999999869987699973778887634568978998