HHsearch alignment for GI: 254780807 and conserved domain: TIGR00406

>TIGR00406 prmA ribosomal protein L11 methyltransferase; InterPro: IPR004498 Ribosomal protein L11 methyltransferase (2.1.1 from EC) is required for the methylation of ribosomal protein L11. It forms a bifunctional operon in Escherichia coli with panF (pantothenate transport).; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.

Probab=97.34  E-value=0.00026  Score=45.75  Aligned_cols=90  Identities=20%  Similarity=0.141  Sum_probs=63.6

Q ss_pred             CCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECH-H-HHHHHCCCCCCEEEEC
Q ss_conf             4311111467733565652275546634787500003899999999973898--0998042-6-6533124798699991
Q gi|254780807|r   73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACR-I-QEAPQMITTCDVISAR  148 (168)
Q Consensus        73 ~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r-~-e~~~~~~~~~d~v~sR  148 (168)
T Consensus       198 ~~viD~GCGSGI----L~IAa~~LGa~~~~g~D~DP~Ave~~r~N~~lN~v~~~~~~~~~~~vPe~~~~~e~~~DViVAN  273 (330)
T TIGR00406       198 KKVIDVGCGSGI----LSIAALKLGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLENSVPELEQPIEGKADVIVAN  273 (330)
T ss_pred             CEEEEECCCHHH----HHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEC
T ss_conf             547871267178----9999997512311221377289999997687458864576432057875345322566757880


Q ss_pred             CCCCH-HHHHHHHHHHHCC
Q ss_conf             47998-9999984885206
Q gi|254780807|r  149 ALADL-DTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a~l-~~ll~~~~pllk~  166 (168)
T Consensus       274 iLA~vi~~L~p~~~~L~~~  292 (330)
T TIGR00406       274 ILAEVIKELYPQFSRLVKP  292 (330)
T ss_pred             CHHHHHHHHHHHHHHHCCC
T ss_conf             0245787641355131068