HHsearch alignment for GI: 254780807 and conserved domain: TIGR00536
>TIGR00536 hemK_fam methyltransferase, HemK family; InterPro: IPR004556 The gene hemK from Escherichia coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase . Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity . Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both Escherichia coli and Haemophilus influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain.; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=95.32 E-value=0.076 Score=31.49 Aligned_cols=73 Identities=16% Similarity=0.285 Sum_probs=58.8
Q ss_pred CCCEEECCCCCHHHHHHHHCCC--CCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHH-HHHCCC-CCCEEE
Q ss_conf 4311111467733565652275--5466347875000038999999999738980--998042665-331247-986999
Q gi|254780807|r 73 SIWIDLGSGGGFPGIITSIQLS--SIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQE-APQMIT-TCDVIS 146 (168)
Q Consensus 73 ~~ilDiGSGaGfPGi~laI~~p--~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~-~~~~~~-~~d~v~ 146 (168)
T Consensus 128 ~~~~d~~~g~g~~~~~~~~~~~pc~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 204 (311)
T TIGR00536 128 LHILDLGTGSGCIALALAYEFPPCNAE---VIAVDLSPDALALAEENAEKLGLEGRVELLQSDLLEPLPGLGGPKLDLLV 204 (311)
T ss_pred CHHHHCCCCCHHHHHHHHHCCCCCCCE---EEEECCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCEEEEE
T ss_conf 011101456315666554304666622---66411223678888876776432012001011244433203665223664
Q ss_pred EC
Q ss_conf 91
Q gi|254780807|r 147 AR 148 (168)
Q Consensus 147 sR 148 (168)
T Consensus 205 ~~ 206 (311)
T TIGR00536 205 SN 206 (311)
T ss_pred CC
T ss_conf 58