HHsearch alignment for GI: 254780807 and conserved domain: TIGR02081

>TIGR02081 metW methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells . .
Probab=95.54  E-value=0.005  Score=38.28  Aligned_cols=89  Identities=20%  Similarity=0.261  Sum_probs=54.0

Q ss_pred             HHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCC--C-----CEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHH
Q ss_conf             3564310012344311111467733565652275546--6-----34787500003899999999973898099804266
Q gi|254780807|r   61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE--G-----GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ  133 (168)
Q Consensus        61 DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~--~-----~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e  133 (168)
T Consensus         3 Dl~~I~~~Ip~GSRVLDLGCGdG---~LL~~L~d~k~v~GPPttehRL~G~Eid~~~---v~Ac~~R-Gv--~VIq~Dld   73 (205)
T TIGR02081         3 DLELILDLIPPGSRVLDLGCGDG---ELLALLRDEKQVRGPPTTEHRLYGIEIDQDG---VLACVAR-GV--SVIQGDLD   73 (205)
T ss_pred             HHHHHHHHCCCCCEEEEECCCCH---HHHHHHHHHCCCCCCCCCCCEEEEEEECHHH---HHHHHHC-CC--CEECCCCC
T ss_conf             57889861688873641016887---8999999743789888712000102345445---9999862-52--01300600


Q ss_pred             H-HHHC-CCCCCEEE----ECCCCCHHHHHH
Q ss_conf             5-3312-47986999----914799899999
Q gi|254780807|r  134 E-APQM-ITTCDVIS----ARALADLDTLLE  158 (168)
Q Consensus       134 ~-~~~~-~~~~d~v~----sRA~a~l~~ll~  158 (168)
T Consensus        74 ~GL~~F~D~~FD~ViLsQTLQa~~Np~~iL~  104 (205)
T TIGR02081        74 EGLEAFPDKSFDYVILSQTLQATRNPEEILD  104 (205)
T ss_pred             CCCCCCCCCCCCEEEECHHHHHHHCHHHHHH
T ss_conf             3401167887662542135664225689998