HHsearch alignment for GI: 254780807 and conserved domain: pfam01170

>pfam01170 UPF0020 Putative RNA methylase family UPF0020. This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains.

Probab=90.72  E-value=1.5  Score=24.06  Aligned_cols=76  Identities=11%  Similarity=0.055  Sum_probs=54.8

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHHHHHCCCCCCEEE
Q ss_conf             123443111114677335656522755466347875000038999999999738980--998042665331247986999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~~~~~~~~~d~v~  146 (168)
T Consensus        26 ~~~g~~vlDP~CGSGtilIEAa~~~~~~~---~~G~Did~~~v~~A~~N~~~~g~~~~i~~~~~D~~~l~~~~~~~d~Iv  102 (171)
T pfam01170        26 WKPGDPLLDPFCGSGTILIEAALMGANVA---LYGSDIDRRMVRGARINAEAAGVGDKIEFVQADAADLPLLNGSVDTIV  102 (171)
T ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHCCCC---CEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCEEEE
T ss_conf             99999788689987899999999613589---536758799999999999982899846999766653879878831899


Q ss_pred             E
Q ss_conf             9
Q gi|254780807|r  147 A  147 (168)
Q Consensus       147 s  147 (168)
T Consensus       103 ~  103 (171)
T pfam01170       103 T  103 (171)
T ss_pred             E
T ss_conf             8