HHsearch alignment for GI: 254780807 and conserved domain: pfam03602

>pfam03602 Cons_hypoth95 Conserved hypothetical protein 95.
Probab=95.58  E-value=0.046  Score=32.71  Aligned_cols=89  Identities=15%  Similarity=0.139  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEE-ECHHH
Q ss_conf             89864635643100123443111114677335656522755466347875000038999999999738980998-04266
Q gi|254780807|r   55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ  133 (168)
Q Consensus        55 ~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi-~~r~e  133 (168)
T Consensus        28 vrEalFniL~~~-~~i~~~~~LDLFaGSGslgl-EAlS---RGA~~v~fvE~~~~a~~~i~~N~~~l~~~~~~~~~~~~~  102 (181)
T pfam03602        28 VREALFNILAPY-FELGGARVLDLFAGSGALGL-EALS---RGASSVVFVEKDKKAVATLKENLEALGLEGAVLRMDAAR  102 (181)
T ss_pred             HHHHHHHHHCCC-CCCCCCEEEECCCCCCHHHH-HHHH---CCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHH
T ss_conf             999999750134-55489879982787269899-9997---699889999699999999999999858997799810899


Q ss_pred             HH---HHCCCCCCEEEEC
Q ss_conf             53---3124798699991
Q gi|254780807|r  134 EA---PQMITTCDVISAR  148 (168)
Q Consensus       134 ~~---~~~~~~~d~v~sR  148 (168)
T Consensus       103 ~~~~~~~~~~~fdiIF~D  120 (181)
T pfam03602       103 ALLRLAGKGPPFDLVFLD  120 (181)
T ss_pred             HHHHHCCCCCCCCEEECC
T ss_conf             998753357888766359