HHsearch results for GI: 254780807 and protein with PDBid: 1dus_A
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.32 E-value=1.7e-06 Score=57.07 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC---EEEECHH
Q ss_conf 9864635643100123443111114677335656522755466347875000038999999999738980---9980426
Q gi|254780807|r 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG---KVFACRI 132 (168)
Q Consensus 56 ~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~---~vi~~r~ 132 (168)
.+.+++.+. ...+++++|+|+|.|..++.+|=.. ..++.+|-+..-+...++-++..++++ +++++.+
T Consensus 41 t~~Ll~~l~----~~~~~~vLDiGcG~G~~~~~la~~~-----~~v~~iDis~~~i~~a~~n~~~~~l~~~~i~~~~~D~ 111 (194)
T 1dus_A 41 TKILVENVV----VDKDDDILDLGCGYGVIGIALADEV-----KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL 111 (194)
T ss_dssp HHHHHHHCC----CCTTCEEEEETCTTSHHHHHHGGGS-----SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST
T ss_pred HHHHHHHCC----CCCCCEEEEECCCCCHHHHHHHHHC-----CEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCH
T ss_conf 999998289----8899949995696429999999738-----8479982636788999999998199986199998736
Q ss_pred HHHHHCCCCCCEEEECCC-----CCHHHHHHHHHHHHCC
Q ss_conf 653312479869999147-----9989999984885206
Q gi|254780807|r 133 QEAPQMITTCDVISARAL-----ADLDTLLEYSFPWLYQ 166 (168)
Q Consensus 133 e~~~~~~~~~d~v~sRA~-----a~l~~ll~~~~pllk~ 166 (168)
.+... ..+||+|++-.. ..+..+++-+...||+
T Consensus 112 ~~~~~-~~~fD~Ii~~~~~~~~~~~~~~~l~~~~~~Lkp 149 (194)
T 1dus_A 112 YENVK-DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKD 149 (194)
T ss_dssp TTTCT-TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEE
T ss_pred HHHCC-CCCCCEEEECCCHHCCCHHHHHHHHHHHHHCCC
T ss_conf 76335-677439999952211615679999999996096