HHsearch results for GI: 254780807 and protein with PDBid: 1qam_A

>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A

Probab=91.84  E-value=0.57  Score=25.15  Aligned_cols=60  Identities=17%  Similarity=0.078  Sum_probs=41.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHHHHH
Q ss_conf             234431111146773356565227554663478750000389999999997389-8099804266533
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP  136 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e~~~  136 (168)
                      ..+..+++||.|.|-=-..|+-.     ...|++||..++-+..|++-  ..+. +.+++++.+-++.
T Consensus        29 ~~~d~VlEIGpG~G~LT~~L~~~-----~~~v~avEiD~~l~~~L~~~--~~~~~n~~ii~~D~l~~~   89 (244)
T 1qam_A           29 NEHDNIFEIGSGKGHFTLELVQR-----CNFVTAIEIDHKLCKTTENK--LVDHDNFQVLNKDILQFK   89 (244)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHH-----SSEEEEECSCHHHHHHHHHH--TTTCCSEEEECCCGGGCC
T ss_pred             CCCCEEEEECCCCCHHHHHHHHC-----CCCEEEEEECHHHHHHHHHH--HCCCCCEEEEECHHHCCC
T ss_conf             99997999738871999999855-----58306998530177999974--144776577300122256