HHsearch results for GI: 254780807 and protein with PDBid: 1vlm_A
>1vlm_A SAM-dependent methyltransferase; possible histamine N-methyltransferase, structural genomics, JCSG, protein structure initiative, PSI; 2.20A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=97.54 E-value=0.0004 Score=43.37 Aligned_cols=82 Identities=15% Similarity=0.109 Sum_probs=55.4
Q ss_pred CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECC
Q ss_conf 23443111114677335656522755466347875000038999999999738980998042665331247986999914
Q gi|254780807|r 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149 (168)
Q Consensus 70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA 149 (168)
..+++++|+|+|.|.-..+++ .++.+|.++.-+...++ + +...+++.+++++-..++||+|++..
T Consensus 46 ~~~~~vLDiGcGtG~~~~~l~---------~~~giD~s~~~i~~a~~---~---~i~~~~~d~~~l~~~~~sfD~V~~~~ 110 (219)
T 1vlm_A 46 LPEGRGVEIGVGTGRFAVPLK---------IKIGVEPSERMAEIARK---R---GVFVLKGTAENLPLKDESFDFALMVT 110 (219)
T ss_dssp CCSSCEEEETCTTSTTHHHHT---------CCEEEESCHHHHHHHHH---T---TCEEEECBTTBCCSCTTCEEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHH---------HEEEEECCHHHHHHHHH---C---CCEEEECCHHHCCCCCCCCCEECCCC
T ss_conf 899909998586779999775---------86999499999999998---6---99899877787899878733203132
Q ss_pred CC----CHHHHHHHHHHHHCC
Q ss_conf 79----989999984885206
Q gi|254780807|r 150 LA----DLDTLLEYSFPWLYQ 166 (168)
Q Consensus 150 ~a----~l~~ll~~~~pllk~ 166 (168)
+- .+..+++=....||+
T Consensus 111 vl~~~~d~~~~l~e~~r~Lkp 131 (219)
T 1vlm_A 111 TICFVDDPERALKEAYRILKK 131 (219)
T ss_dssp CGGGSSCHHHHHHHHHHHEEE
T ss_pred CHHHHCCHHHHHHHHHHHCCC
T ss_conf 015534899999999998586