HHsearch results for GI: 254780807 and protein with PDBid: 2b3t_A
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.38 E-value=1.9e-06 Score=56.87 Aligned_cols=120 Identities=15% Similarity=0.127 Sum_probs=80.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHH-------------CCC-----CCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
Q ss_conf 799989999999999999984-------------632-----13043089999989864635643100123443111114
Q gi|254780807|r 19 YNVSRETLEKLEYFYFLFLKW-------------SKK-----INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80 (168)
Q Consensus 19 ~~ls~eq~~~l~~y~~ll~~~-------------N~~-----~NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGS 80 (168)
..+++++.+++....+...+- +.. -=|+=+-+.|.+.+ ..+. .....+.+++|+||
T Consensus 45 ~~l~~~~~~~~~~~~~rr~~g~PlqYI~G~~~F~g~~f~v~~~vlIPRpeTE~lv~-~~l~-----~~~~~~~~ilDlgt 118 (276)
T 2b3t_A 45 TQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVE-QALA-----RLPEQPCRILDLGT 118 (276)
T ss_dssp CBCCHHHHHHHHHHHHHHHTTCCHHHHSCEEEETTEEEECCTTSCCCCTTHHHHHH-HHHH-----HSCSSCCEEEEETC
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCCEEEECCCCCCCCCHHHHHHH-HHHH-----HCCCCCCEEEEECC
T ss_conf 88999999999999999986996679738237879278758877069976999999-9987-----51457861764146
Q ss_pred CCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf 67733565652275546634787500003899999999973898-099804266533124798699991
Q gi|254780807|r 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVISAR 148 (168)
Q Consensus 81 GaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~~vi~~r~e~~~~~~~~~d~v~sR 148 (168)
|.|.=|+.+|..+|+.+ |+.+|-+.+-+...++-++.++++ +.++++..-+... ..+||+|+|-
T Consensus 119 GsG~I~i~la~~~p~~~---v~a~Dis~~Al~~A~~Na~~~~~~~v~~~~~D~~~~~~-~~~fDlIvsN 183 (276)
T 2b3t_A 119 GTGAIALALASERPDCE---IIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA-GQQFAMIVSN 183 (276)
T ss_dssp TTSHHHHHHHHHCTTSE---EEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT-TCCEEEEEEC
T ss_pred CCHHHHHHHHHHCCCCE---EEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC-CCCEEEEEEC
T ss_conf 53299999998689875---88641766889999999997499877999757643367-8841578856