HHsearch results for GI: 254780807 and protein with PDBid: 2dul_A
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferase; tRNA modification enzyme, guanine 26, N(2),N(2)- dimethyltransferase; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=95.67 E-value=0.083 Score=30.01 Aligned_cols=93 Identities=13% Similarity=0.076 Sum_probs=71.1
Q ss_pred CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC----------------EEEECHHHH
Q ss_conf 3443111114677335656522755466347875000038999999999738980----------------998042665
Q gi|254780807|r 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----------------KVFACRIQE 134 (168)
Q Consensus 71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~----------------~vi~~r~e~ 134 (168)
.+.+++|..||.|.=||-.|.-.+- .+|+++|.+..-+..++.-++..++.+ .+.+..+..
T Consensus 47 ~~~~iLD~~sasG~r~iRya~E~~~---~~V~~nDi~~~A~~~i~~N~~~N~~~~~~~~~~~~~~~~~~~~~~~~~Da~~ 123 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPA---EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANR 123 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSC---SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHH
T ss_conf 9998999788722999999985899---8899996998999999999997086533433343322455436752112788
Q ss_pred H-HHCCCCCCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 3-3124798699991479989999984885206
Q gi|254780807|r 135 A-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166 (168)
Q Consensus 135 ~-~~~~~~~d~v~sRA~a~l~~ll~~~~pllk~ 166 (168)
+ .+....||+|--=.|++...+++-+..-++.
T Consensus 124 ~~~~~~~~~DvIDiDPfGsp~pfldsA~~a~~~ 156 (378)
T 2dul_A 124 LMAERHRYFHFIDLDPFGSPMEFLDTALRSAKR 156 (378)
T ss_dssp HHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEE
T ss_pred HHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 987447877433138999818999999997055