HHsearch results for GI: 254780807 and protein with PDBid: 3g89_A

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=100.00  E-value=0  Score=306.07  Aligned_cols=158  Identities=26%  Similarity=0.364  Sum_probs=141.7

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC--CCCCCEEECCCCC
Q ss_conf             68885136666417999899999999999999846321304308999998986463564310012--3443111114677
Q gi|254780807|r    6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGG   83 (168)
Q Consensus         6 ~n~~~~~~~l~~~~~ls~eq~~~l~~y~~ll~~~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~--~~~~ilDiGSGaG   83 (168)
                      ..+++.+..-..++.+++ |+++|..|+++|.+||+++||||+++.+++|.|||+||+++.++..  .+.+++|||||||
T Consensus        14 ~~~~l~~~~~~lg~~~~~-q~~~l~~y~~lL~~wN~~~NLt~~~~~~~~~~rHilDSl~i~~~~~~~~~~~vlDiGSGaG   92 (249)
T 3g89_A           14 GRALLLEGGKALGLDLKP-HLEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAG   92 (249)
T ss_dssp             HHHHHHHHHHHHTCCCGG-GHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTT
T ss_pred             HHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
T ss_conf             999999999983998389-9999999999999855553220458989999999999998753146778978984269999


Q ss_pred             HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHH---HCCCCCCEEEECCCCCHHHHHHH
Q ss_conf             335656522755466347875000038999999999738980-99804266533---12479869999147998999998
Q gi|254780807|r   84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEY  159 (168)
Q Consensus        84 fPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~---~~~~~~d~v~sRA~a~l~~ll~~  159 (168)
                      ||||||||++|+.+   ||||||++||++||++++++|+|+| +|+++|+|++.   .+...||+||||||++++.++++
T Consensus        93 ~PGipLAI~~p~~~---v~LvEs~~KK~~FL~~v~~~LgL~Nv~vi~~R~E~~~~~~~~~~~fD~v~aRAva~l~~ll~~  169 (249)
T 3g89_A           93 FPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSEL  169 (249)
T ss_dssp             TTHHHHHHHCTTCE---EEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESSCCHHHHHHH
T ss_pred             CCEEEEEEECCCCE---EEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHH
T ss_conf             64057878369832---999808278999999999982999845887787870433123555005765552549999998


Q ss_pred             HHHHHCCC
Q ss_conf             48852067
Q gi|254780807|r  160 SFPWLYQK  167 (168)
Q Consensus       160 ~~pllk~k  167 (168)
                      +.|++++.
T Consensus       170 ~~~~lk~~  177 (249)
T 3g89_A          170 LLPFLEVG  177 (249)
T ss_dssp             HGGGEEEE
T ss_pred             HHHHCCCC
T ss_conf             64431679