HHsearch results for GI: 254780807 and protein with PDBid: 3g89_A
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=100.00 E-value=0 Score=306.07 Aligned_cols=158 Identities=26% Similarity=0.364 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC--CCCCCEEECCCCC
Q ss_conf 68885136666417999899999999999999846321304308999998986463564310012--3443111114677
Q gi|254780807|r 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGG 83 (168)
Q Consensus 6 ~n~~~~~~~l~~~~~ls~eq~~~l~~y~~ll~~~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~--~~~~ilDiGSGaG 83 (168)
..+++.+..-..++.+++ |+++|..|+++|.+||+++||||+++.+++|.|||+||+++.++.. .+.+++|||||||
T Consensus 14 ~~~~l~~~~~~lg~~~~~-q~~~l~~y~~lL~~wN~~~NLt~~~~~~~~~~rHilDSl~i~~~~~~~~~~~vlDiGSGaG 92 (249)
T 3g89_A 14 GRALLLEGGKALGLDLKP-HLEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAG 92 (249)
T ss_dssp HHHHHHHHHHHHTCCCGG-GHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTT
T ss_pred HHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
T ss_conf 999999999983998389-9999999999999855553220458989999999999998753146778978984269999
Q ss_pred HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHH---HCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 335656522755466347875000038999999999738980-99804266533---12479869999147998999998
Q gi|254780807|r 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEY 159 (168)
Q Consensus 84 fPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~---~~~~~~d~v~sRA~a~l~~ll~~ 159 (168)
||||||||++|+.+ ||||||++||++||++++++|+|+| +|+++|+|++. .+...||+||||||++++.++++
T Consensus 93 ~PGipLAI~~p~~~---v~LvEs~~KK~~FL~~v~~~LgL~Nv~vi~~R~E~~~~~~~~~~~fD~v~aRAva~l~~ll~~ 169 (249)
T 3g89_A 93 FPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSEL 169 (249)
T ss_dssp TTHHHHHHHCTTCE---EEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESSCCHHHHHHH
T ss_pred CCEEEEEEECCCCE---EEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHH
T ss_conf 64057878369832---999808278999999999982999845887787870433123555005765552549999998
Q ss_pred HHHHHCCC
Q ss_conf 48852067
Q gi|254780807|r 160 SFPWLYQK 167 (168)
Q Consensus 160 ~~pllk~k 167 (168)
+.|++++.
T Consensus 170 ~~~~lk~~ 177 (249)
T 3g89_A 170 LLPFLEVG 177 (249)
T ss_dssp HGGGEEEE
T ss_pred HHHHCCCC
T ss_conf 64431679