Query         gi|254780807|ref|YP_003065220.1| glucose-inhibited division protein B [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 168
No_of_seqs    118 out of 2055
Neff          6.0 
Searched_HMMs 23785
Date          Mon May 30 12:46:32 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780807.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1xdz_A Methyltransferase GIDB; 100.0       0       0  317.1  15.4  156    9-167     6-167 (240)
  2 1jsx_A Glucose-inhibited divis 100.0       0       0  311.7  12.3  152   11-167     6-158 (207)
  3 3g89_A Ribosomal RNA small sub 100.0       0       0  306.1  14.9  158    6-167    14-177 (249)
  4 3mgg_A Methyltransferase; NYSG  98.6 1.1E-07 4.7E-12   63.9   8.5   95   69-166    35-134 (276)
  5 3e05_A Precorrin-6Y C5,15-meth  98.6 2.7E-07 1.1E-11   61.7   9.7   96   69-167    38-135 (204)
  6 2o57_A Putative sarcosine dime  98.6 6.3E-07 2.6E-11   59.6  11.3  106   57-166    68-179 (297)
  7 2gpy_A O-methyltransferase; st  98.6 2.4E-07   1E-11   62.0   8.6   94   70-166    53-152 (233)
  8 3evz_A Methyltransferase; NYSG  98.5 2.4E-07   1E-11   62.0   7.5   80   65-147    49-129 (230)
  9 2p8j_A S-adenosylmethionine-de  98.5 2.5E-07   1E-11   61.9   7.4   94   69-166    21-120 (209)
 10 3gu3_A Methyltransferase; alph  98.5 4.3E-07 1.8E-11   60.6   8.0   95   69-166    20-118 (284)
 11 3kkz_A Uncharacterized protein  98.5 4.5E-07 1.9E-11   60.4   7.6  100   63-166    38-142 (267)
 12 3a27_A TYW2, uncharacterized p  98.4 7.4E-07 3.1E-11   59.2   7.9   98   65-166   113-211 (272)
 13 3hm2_A Precorrin-6Y C5,15-meth  98.4 2.1E-06 8.8E-11   56.6   9.5   94   71-167    25-120 (178)
 14 1xxl_A YCGJ protein; structura  98.4 1.4E-06   6E-11   57.5   8.4  104   58-166     5-116 (239)
 15 2b3t_A Protein methyltransfera  98.4 1.9E-06 7.8E-11   56.9   9.0  120   19-148    45-183 (276)
 16 1or8_A Protein arginine N-meth  98.4   2E-06 8.2E-11   56.7   9.0   92   70-166    56-156 (340)
 17 1nv8_A HEMK protein; class I a  98.4 1.8E-06 7.4E-11   57.0   8.7  127   13-148    52-199 (284)
 18 3b3f_A Histone-arginine methyl  98.4 2.3E-06 9.7E-11   56.3   9.1   90   71-166    46-143 (341)
 19 3lpm_A Putative methyltransfer  98.3 1.6E-06 6.9E-11   57.2   7.9   86   58-147    33-125 (259)
 20 1ve3_A Hypothetical protein PH  98.3 1.8E-06 7.7E-11   56.9   8.0   96   66-166    33-134 (227)
 21 3dlc_A Putative S-adenosyl-L-m  98.3 1.6E-06 6.7E-11   57.2   7.7   92   71-166    43-140 (219)
 22 1dus_A MJ0882; hypothetical pr  98.3 1.7E-06 7.2E-11   57.1   7.7  101   56-166    41-149 (194)
 23 3dh0_A SAM dependent methyltra  98.3 1.9E-06 7.8E-11   56.9   7.7   95   69-166    35-135 (219)
 24 1vl5_A Unknown conserved prote  98.3 2.7E-06 1.1E-10   55.9   8.5   92   70-166    36-132 (260)
 25 3c3p_A Methyltransferase; NP_9  98.3 3.4E-06 1.4E-10   55.4   8.7   95   70-166    55-152 (210)
 26 2fyt_A Protein arginine N-meth  98.3 7.1E-06   3E-10   53.5   9.8   91   71-166    64-163 (340)
 27 1l3i_A Precorrin-6Y methyltran  98.3 6.3E-06 2.7E-10   53.8   9.4   92   70-166    32-126 (192)
 28 2h00_A Methyltransferase 10 do  98.3 1.5E-06 6.2E-11   57.4   6.0   91   55-148    48-147 (254)
 29 3gnl_A Uncharacterized protein  98.2 5.8E-06 2.4E-10   54.0   8.8   97   65-165    15-116 (244)
 30 3fpf_A Mtnas, putative unchara  98.2 8.7E-06 3.7E-10   53.0   9.7   91   70-166   121-214 (298)
 31 2pjd_A Ribosomal RNA small sub  98.2 2.4E-06 9.9E-11   56.3   6.6   73   71-148   196-268 (343)
 32 2ozv_A Hypothetical protein AT  98.2 2.6E-06 1.1E-10   56.0   6.7  114   51-167    14-163 (260)
 33 2qm3_A Predicted methyltransfe  98.2 8.5E-06 3.6E-10   53.1   9.2   78   71-152   172-252 (373)
 34 3mti_A RRNA methylase; SAM-dep  98.2   8E-06 3.4E-10   53.2   9.0   80   65-149    16-97  (185)
 35 3dmg_A Probable ribosomal RNA   98.2 1.4E-05 5.8E-10   51.8  10.0  106   56-166   216-332 (381)
 36 1dl5_A Protein-L-isoaspartate   98.2 4.5E-06 1.9E-10   54.7   7.4   81   69-151    73-154 (317)
 37 3kr9_A SAM-dependent methyltra  98.2 7.9E-06 3.3E-10   53.3   8.6   99   64-165     8-110 (225)
 38 3bus_A REBM, methyltransferase  98.2 1.6E-05 6.8E-10   51.5  10.1   94   69-166    59-158 (273)
 39 3m70_A Tellurite resistance pr  98.2 6.8E-06 2.9E-10   53.6   8.2   90   71-166   120-215 (286)
 40 3f4k_A Putative methyltransfer  98.2 7.3E-06 3.1E-10   53.4   8.1   97   66-166    41-142 (257)
 41 2yxd_A Probable cobalt-precorr  98.2 2.1E-05 8.7E-10   50.8  10.4   88   69-162    33-121 (183)
 42 1y8c_A S-adenosylmethionine-de  98.2   2E-05 8.4E-10   50.9  10.2  124   26-166     3-134 (246)
 43 1g6q_1 HnRNP arginine N-methyl  98.2 1.5E-05 6.3E-10   51.6   9.5   91   71-166    38-137 (328)
 44 3dr5_A Putative O-methyltransf  98.2 1.6E-05 6.6E-10   51.5   9.6   95   70-166    55-155 (221)
 45 3b3j_A Histone-arginine methyl  98.1 9.9E-06 4.2E-10   52.7   8.4   75   71-151   158-234 (480)
 46 3l8d_A Methyltransferase; stru  98.1 6.4E-06 2.7E-10   53.8   6.8   93   66-166    48-145 (242)
 47 2nxc_A L11 mtase, ribosomal pr  98.1 1.1E-05 4.5E-10   52.5   7.8   78   68-151   117-194 (254)
 48 3grz_A L11 mtase, ribosomal pr  98.1 4.9E-06   2E-10   54.4   6.1   77   68-150    57-134 (205)
 49 1sui_A Caffeoyl-COA O-methyltr  98.1 3.5E-05 1.5E-09   49.5  10.0   96   70-167    78-183 (247)
 50 2i6g_A Putative methyltransfer  98.1 2.6E-05 1.1E-09   50.3   9.2  109   51-166     6-127 (199)
 51 1jg1_A PIMT;, protein-L-isoasp  98.1 1.1E-05 4.5E-10   52.5   7.2   78   70-151    90-168 (235)
 52 2esr_A Methyltransferase; stru  98.1 1.1E-05 4.8E-10   52.3   7.3   74   71-148    31-107 (177)
 53 3fzg_A 16S rRNA methylase; met  98.0 8.4E-06 3.5E-10   53.1   6.4   81   65-150    43-124 (200)
 54 2yqz_A Hypothetical protein TT  98.0 3.2E-05 1.3E-09   49.8   8.5   91   71-166    39-133 (263)
 55 3g5l_A Putative S-adenosylmeth  98.0 2.6E-05 1.1E-09   50.2   8.1   89   71-166    44-137 (253)
 56 1wy7_A Hypothetical protein PH  98.0   3E-05 1.3E-09   49.9   8.3  102   39-149    19-120 (207)
 57 3lcv_B Sisomicin-gentamicin re  98.0 1.6E-05 6.5E-10   51.5   6.7   80   67-150   128-207 (281)
 58 2ex4_A Adrenal gland protein A  98.0 2.3E-05 9.8E-10   50.5   7.5   93   70-166    78-177 (241)
 59 1xtp_A LMAJ004091AAA; SGPP, st  98.0 1.7E-05 7.1E-10   51.3   6.7   89   71-166    93-189 (254)
 60 3gdh_A Trimethylguanosine synt  98.0   3E-05 1.3E-09   49.9   7.9   74   70-149    77-152 (241)
 61 2yxe_A Protein-L-isoaspartate   98.0 2.5E-05   1E-09   50.4   7.4   81   70-152    76-157 (215)
 62 2avd_A Catechol-O-methyltransf  97.9 8.3E-05 3.5E-09   47.3   9.9   95   70-166    68-171 (229)
 63 3dtn_A Putative methyltransfer  97.9 1.7E-05 7.3E-10   51.3   6.3   95   67-166    40-140 (234)
 64 3c3y_A Pfomt, O-methyltransfer  97.9   5E-05 2.1E-09   48.6   8.5   95   70-166    69-173 (237)
 65 2frn_A Hypothetical protein PH  97.9 3.5E-05 1.5E-09   49.5   7.6   96   66-166   120-217 (278)
 66 3lec_A NADB-rossmann superfami  97.9   7E-05   3E-09   47.7   9.1   99   65-166    15-117 (230)
 67 3g5t_A Trans-aconitate 3-methy  97.9 4.3E-05 1.8E-09   49.0   7.8   95   69-166    34-141 (299)
 68 1wzn_A SAM-dependent methyltra  97.9 8.3E-05 3.5E-09   47.3   9.2   90   71-166    41-137 (252)
 69 2avn_A Ubiquinone/menaquinone   97.9 3.1E-05 1.3E-09   49.8   6.9   91   66-166    49-144 (260)
 70 2fca_A TRNA (guanine-N(7)-)-me  97.9 0.00012 5.1E-09   46.4   9.6   92   72-166    39-145 (213)
 71 2hnk_A SAM-dependent O-methylt  97.8 9.6E-05   4E-09   47.0   8.6   95   70-166    59-173 (239)
 72 3bkx_A SAM-dependent methyltra  97.8 0.00014 5.7E-09   46.1   9.4   95   69-166    41-151 (275)
 73 1nkv_A Hypothetical protein YJ  97.8 4.7E-05   2E-09   48.8   6.9   92   70-166    35-132 (256)
 74 1ws6_A Methyltransferase; stru  97.8 7.3E-05 3.1E-09   47.7   7.6   76   68-148    38-117 (171)
 75 3jwg_A HEN1, methyltransferase  97.8 7.5E-05 3.2E-09   47.6   7.6   93   71-166    29-133 (219)
 76 2pwy_A TRNA (adenine-N(1)-)-me  97.8 7.4E-05 3.1E-09   47.6   7.4   94   69-166    94-190 (258)
 77 2p35_A Trans-aconitate 2-methy  97.8 8.1E-05 3.4E-09   47.4   7.5   89   70-166    32-124 (259)
 78 3jwh_A HEN1; methyltransferase  97.8 0.00012 5.2E-09   46.3   8.4   93   71-166    29-133 (217)
 79 3bkw_A MLL3908 protein, S-aden  97.8   5E-05 2.1E-09   48.6   6.3   89   71-166    43-136 (243)
 80 3d2l_A SAM-dependent methyltra  97.8 0.00012 4.9E-09   46.5   8.1   92   68-166    30-129 (243)
 81 2yvl_A TRMI protein, hypotheti  97.8 0.00012 5.1E-09   46.4   8.2  113   48-166    57-182 (248)
 82 2pbf_A Protein-L-isoaspartate   97.7 0.00011 4.5E-09   46.7   7.7   85   68-152    77-173 (227)
 83 2kw5_A SLR1183 protein; struct  97.7 0.00017   7E-09   45.6   8.6   91   71-166    29-123 (202)
 84 2pxx_A Uncharacterized protein  97.7 4.7E-05   2E-09   48.7   5.6   80   66-151    37-117 (215)
 85 1wxx_A TT1595, hypothetical pr  97.7   7E-05 2.9E-09   47.8   6.4   91   71-166   209-317 (382)
 86 2gs9_A Hypothetical protein TT  97.7 0.00013 5.6E-09   46.2   7.6  101   53-166    20-124 (211)
 87 2fk8_A Methoxy mycolic acid sy  97.7  0.0005 2.1E-08   42.8  10.5   92   69-167    88-187 (318)
 88 1yb2_A Hypothetical protein TA  97.7 8.5E-05 3.6E-09   47.3   6.4   93   69-166   108-203 (275)
 89 3iv6_A Putative Zn-dependent a  97.7 4.3E-05 1.8E-09   49.0   4.8   80   67-151    41-120 (261)
 90 1o54_A SAM-dependent O-methylt  97.7 0.00016 6.8E-09   45.7   7.7  116   45-166    76-205 (277)
 91 3eey_A Putative rRNA methylase  97.7 0.00014 5.9E-09   46.0   7.4   80   65-147    16-99  (197)
 92 3duw_A OMT, O-methyltransferas  97.6 0.00048   2E-08   42.9   9.4   96   70-167    57-160 (223)
 93 1i9g_A Hypothetical protein RV  97.6 0.00027 1.1E-08   44.4   8.0   92   70-165    98-194 (280)
 94 3cbg_A O-methyltransferase; cy  97.6 0.00034 1.4E-08   43.8   8.5   95   70-166    71-174 (232)
 95 1i1n_A Protein-L-isoaspartate   97.6 0.00029 1.2E-08   44.2   7.7   81   68-151    74-161 (226)
 96 1yzh_A TRNA (guanine-N(7)-)-me  97.5 0.00057 2.4E-08   42.5   9.1   92   72-166    42-148 (214)
 97 1vlm_A SAM-dependent methyltra  97.5  0.0004 1.7E-08   43.4   8.4   82   70-166    46-131 (219)
 98 1zx0_A Guanidinoacetate N-meth  97.5 0.00026 1.1E-08   44.5   7.3   93   70-166    59-162 (236)
 99 3ege_A Putative methyltransfer  97.5 0.00029 1.2E-08   44.2   7.6   98   55-166    22-123 (261)
100 3hem_A Cyclopropane-fatty-acyl  97.5 0.00064 2.7E-08   42.2   9.3   92   69-167    70-176 (302)
101 3ocj_A Putative exported prote  97.5 9.1E-05 3.8E-09   47.1   5.0   95   68-166   115-219 (305)
102 3mb5_A SAM-dependent methyltra  97.5 0.00041 1.7E-08   43.3   8.0   93   69-166    91-186 (255)
103 3frh_A 16S rRNA methylase; met  97.5 0.00023 9.6E-09   44.8   6.7   76   70-152   104-179 (253)
104 1nt2_A Fibrillarin-like PRE-rR  97.4 0.00057 2.4E-08   42.5   8.1   93   69-166    55-153 (210)
105 2p7i_A Hypothetical protein; p  97.4 0.00044 1.8E-08   43.2   7.5   87   71-166    42-133 (250)
106 1ne2_A Hypothetical protein TA  97.4 0.00034 1.4E-08   43.8   6.8   91   44-147    26-116 (200)
107 1fbn_A MJ fibrillarin homologu  97.4 0.00039 1.6E-08   43.5   7.0   94   69-166    72-170 (230)
108 2aot_A HMT, histamine N-methyl  97.4   0.001 4.2E-08   41.1   9.1   95   71-166    52-164 (292)
109 1vbf_A 231AA long hypothetical  97.4 0.00029 1.2E-08   44.2   6.3   77   69-151    68-144 (231)
110 2as0_A Hypothetical protein PH  97.4 0.00043 1.8E-08   43.2   7.2   96   67-166   213-327 (396)
111 3id6_C Fibrillarin-like rRNA/T  97.4 0.00069 2.9E-08   42.0   7.9   94   69-166    74-173 (232)
112 3hnr_A Probable methyltransfer  97.4 0.00052 2.2E-08   42.8   7.2   87   71-166    45-137 (220)
113 3lbf_A Protein-L-isoaspartate   97.4 0.00068 2.8E-08   42.1   7.6   77   70-151    76-153 (210)
114 1r18_A Protein-L-isoaspartate(  97.4 0.00034 1.4E-08   43.8   6.0   85   68-152    81-174 (227)
115 3lcc_A Putative methyl chlorid  97.4 0.00023 9.7E-09   44.8   5.1   75   71-151    66-142 (235)
116 2fhp_A Methylase, putative; al  97.3 0.00076 3.2E-08   41.8   7.7   86   70-159    43-137 (187)
117 3g07_A 7SK snRNA methylphospha  97.3  0.0001 4.3E-09   46.8   3.2   54   69-125    44-97  (292)
118 3ccf_A Cyclopropane-fatty-acyl  97.3 0.00036 1.5E-08   43.6   5.9   86   71-166    57-146 (279)
119 3h2b_A SAM-dependent methyltra  97.3  0.0012 5.2E-08   40.6   8.5   87   71-166    41-133 (203)
120 3m33_A Uncharacterized protein  97.3 0.00021 8.9E-09   45.0   4.6  120   20-158     5-127 (226)
121 2fpo_A Methylase YHHF; structu  97.3 0.00057 2.4E-08   42.5   6.7   86   71-160    54-144 (202)
122 3dli_A Methyltransferase; PSI-  97.3  0.0015 6.3E-08   40.1   8.7   90   65-166    35-132 (240)
123 3hvi_A Catechol O-methyltransf  97.3  0.0019 8.1E-08   39.4   9.1   95   70-166    57-162 (221)
124 3e23_A Uncharacterized protein  97.3 0.00084 3.5E-08   41.5   7.1   89   67-166    39-133 (211)
125 1im8_A YECO; methyltransferase  97.2  0.0012 5.1E-08   40.6   7.9   97   67-166    54-158 (244)
126 1kpg_A CFA synthase;, cyclopro  97.2  0.0013 5.5E-08   40.4   8.0  110   49-166    43-160 (287)
127 2yx1_A Hypothetical protein MJ  97.2  0.0011 4.4E-08   41.0   7.5   89   69-166   193-283 (336)
128 3c0k_A UPF0064 protein YCCW; P  97.2  0.0017 7.3E-08   39.7   8.5   92   71-166   220-331 (396)
129 1ri5_A MRNA capping enzyme; me  97.2  0.0012 5.1E-08   40.6   7.7  101   62-166    55-166 (298)
130 1g8a_A Fibrillarin-like PRE-rR  97.2 0.00098 4.1E-08   41.1   6.8   94   69-166    71-170 (227)
131 3i9f_A Putative type 11 methyl  97.1 0.00092 3.9E-08   41.3   6.2   84   71-166    17-104 (170)
132 3bzb_A Uncharacterized protein  97.1  0.0014 6.1E-08   40.2   7.2  110   52-165    53-191 (281)
133 1xva_A Glycine N-methyltransfe  97.1 0.00054 2.3E-08   42.6   4.9  102   56-166    45-166 (292)
134 3g2m_A PCZA361.24; SAM-depende  97.1 0.00087 3.7E-08   41.4   5.6   74   69-148    80-157 (299)
135 3ou2_A SAM-dependent methyltra  97.1  0.0014 5.9E-08   40.2   6.6   88   69-166    44-138 (218)
136 2ipx_A RRNA 2'-O-methyltransfe  97.0  0.0033 1.4E-07   38.1   8.4   93   69-166    75-174 (233)
137 1p91_A Ribosomal RNA large sub  97.0  0.0019   8E-08   39.5   7.0   73   70-149    84-156 (269)
138 3e8s_A Putative SAM dependent   97.0  0.0003 1.2E-08   44.1   2.8   88   70-166    51-144 (227)
139 3mcz_A O-methyltransferase; ad  97.0  0.0045 1.9E-07   37.3   8.7   76   71-150   179-257 (352)
140 3bxo_A N,N-dimethyltransferase  97.0  0.0015 6.5E-08   40.0   6.2   90   67-166    36-133 (239)
141 3cc8_A Putative methyltransfer  97.0  0.0014 5.9E-08   40.2   6.0   87   70-166    31-122 (230)
142 3cgg_A SAM-dependent methyltra  96.9  0.0018 7.5E-08   39.6   6.4   91   67-166    42-139 (195)
143 2b78_A Hypothetical protein SM  96.7  0.0064 2.7E-07   36.4   7.5   94   69-166   210-323 (385)
144 2r3s_A Uncharacterized protein  96.7  0.0044 1.9E-07   37.3   6.6   75   71-150   165-241 (335)
145 1x19_A CRTF-related protein; m  96.7   0.011 4.8E-07   35.0   8.6   74   71-150   190-265 (359)
146 2vdv_E TRNA (guanine-N(7)-)-me  96.6   0.003 1.3E-07   38.3   5.4   73   72-147    50-134 (246)
147 2ip2_A Probable phenazine-spec  96.6  0.0025   1E-07   38.8   4.7   90   71-166   167-264 (334)
148 2igt_A SAM dependent methyltra  96.5   0.014 5.7E-07   34.5   8.3   93   70-167   152-265 (332)
149 3i53_A O-methyltransferase; CO  96.5   0.018 7.4E-07   33.9   8.7   90   71-166   169-266 (332)
150 3dp7_A SAM-dependent methyltra  96.5  0.0038 1.6E-07   37.7   5.3   93   70-166   178-279 (363)
151 1nw3_A Histone methyltransfera  96.5   0.013 5.4E-07   34.7   7.9   86   70-158   154-251 (416)
152 3ckk_A TRNA (guanine-N(7)-)-me  96.4  0.0059 2.5E-07   36.6   6.0   75   71-148    46-130 (235)
153 1qzz_A RDMB, aclacinomycin-10-  96.4   0.005 2.1E-07   37.0   5.5   75   71-151   182-258 (374)
154 2f8l_A Hypothetical protein LM  96.4   0.052 2.2E-06   31.2  10.5   76   70-148   129-208 (344)
155 2zfu_A Nucleomethylin, cerebra  96.3  0.0053 2.2E-07   36.9   5.3   77   68-166    64-143 (215)
156 3dxy_A TRNA (guanine-N(7)-)-me  96.3  0.0085 3.6E-07   35.7   6.3   81   71-154    34-118 (218)
157 3bt7_A TRNA (uracil-5-)-methyl  96.2   0.018 7.5E-07   33.9   7.3   77   71-152   213-309 (369)
158 2b25_A Hypothetical protein; s  96.1   0.018 7.5E-07   33.9   6.8  101   61-165    93-210 (336)
159 1u2z_A Histone-lysine N-methyl  96.0   0.021 8.8E-07   33.4   7.1   85   70-157   241-339 (433)
160 1uwv_A 23S rRNA (uracil-5-)-me  96.0   0.051 2.1E-06   31.2   9.0   72   71-147   286-362 (433)
161 3ggd_A SAM-dependent methyltra  96.0   0.014 5.8E-07   34.5   6.1   91   68-166    53-155 (245)
162 3ofk_A Nodulation protein S; N  96.0  0.0094 3.9E-07   35.5   5.0   87   71-166    51-146 (216)
163 2a14_A Indolethylamine N-methy  95.9   0.014 5.7E-07   34.6   5.6   51   70-124    54-104 (263)
164 2i62_A Nicotinamide N-methyltr  95.8  0.0098 4.1E-07   35.4   4.4   68   53-124    36-105 (265)
165 2b9e_A NOL1/NOP2/SUN domain fa  95.7   0.032 1.4E-06   32.4   7.0   77   71-149   102-182 (309)
166 2dul_A N(2),N(2)-dimethylguano  95.7   0.083 3.5E-06   30.0   8.9   93   71-166    47-156 (378)
167 3gjy_A Spermidine synthase; AP  95.7   0.036 1.5E-06   32.1   7.0   92   55-153    70-171 (317)
168 3gwz_A MMCR; methyltransferase  95.7   0.045 1.9E-06   31.5   7.5   74   71-150   202-277 (369)
169 3ll7_A Putative methyltransfer  95.6   0.042 1.8E-06   31.7   7.3   75   68-147    90-169 (410)
170 2ift_A Putative methylase HI07  95.5   0.054 2.3E-06   31.1   7.4   85   56-147    41-131 (201)
171 3p2e_A 16S rRNA methylase; met  95.4   0.047   2E-06   31.4   7.0   65   72-139    25-94  (225)
172 1tw3_A COMT, carminomycin 4-O-  95.1   0.066 2.8E-06   30.6   6.9   75   71-151   183-259 (360)
173 3gru_A Dimethyladenosine trans  95.0    0.12 4.9E-06   29.1   7.9   72   70-147    49-120 (295)
174 1pjz_A Thiopurine S-methyltran  94.8   0.024   1E-06   33.1   3.9   91   70-165    21-131 (203)
175 3m6w_A RRNA methylase; rRNA me  94.7    0.14 5.8E-06   28.7   7.6   77   71-149   101-178 (464)
176 1ixk_A Methyltransferase; open  94.6    0.18 7.6E-06   28.0   8.0   77   71-149   118-195 (315)
177 3bgv_A MRNA CAP guanine-N7 met  94.3   0.083 3.5E-06   30.0   5.7   92   70-165    33-146 (313)
178 2jjq_A Uncharacterized RNA met  94.2    0.14 5.8E-06   28.7   6.7   74   71-152   290-367 (425)
179 1mjf_A Spermidine synthase; sp  94.2    0.28 1.2E-05   26.9   8.2   98   52-155    58-166 (281)
180 2h1r_A Dimethyladenosine trans  93.9    0.19 8.1E-06   27.9   6.9   71   70-147    41-112 (299)
181 1sqg_A SUN protein, FMU protei  93.8    0.15 6.3E-06   28.5   6.3   76   71-149   246-323 (429)
182 2frx_A Hypothetical protein YE  93.3     0.4 1.7E-05   26.1   7.8   77   71-149   117-195 (479)
183 3ndi_A Methyltransferase; S-ad  93.2    0.13 5.6E-06   28.8   5.2  104   54-166    87-200 (416)
184 3ajd_A Putative methyltransfer  93.1     0.4 1.7E-05   26.0   7.5   77   71-149    83-164 (274)
185 1uir_A Polyamine aminopropyltr  93.0    0.29 1.2E-05   26.8   6.7   81   68-152    74-162 (314)
186 3m4x_A NOL1/NOP2/SUN family pr  92.7    0.42 1.8E-05   26.0   7.1   77   71-149   105-183 (456)
187 2yui_A Anamorsin; cytokine-ind  92.4   0.079 3.3E-06   30.1   3.1   85   71-166     4-96  (182)
188 2yxl_A PH0851 protein, 450AA l  92.4    0.41 1.7E-05   26.0   6.8   77   71-149   259-338 (450)
189 2r6z_A UPF0341 protein in RSP   92.3    0.41 1.7E-05   26.0   6.7   75   71-150    83-170 (258)
190 1fp2_A Isoflavone O-methytrans  92.2    0.18 7.6E-06   28.0   4.8   67   71-151   188-256 (352)
191 2g72_A Phenylethanolamine N-me  92.1    0.25   1E-05   27.3   5.3   59   54-116    52-112 (289)
192 1qam_A ERMC' methyltransferase  91.8    0.57 2.4E-05   25.2   7.0   60   70-136    29-89  (244)
193 2gb4_A Thiopurine S-methyltran  91.8    0.58 2.4E-05   25.1   6.9   75   69-151    66-162 (252)
194 3adn_A Spermidine synthase; am  91.2     0.6 2.5E-05   25.1   6.5   82   68-153    80-169 (294)
195 2pt6_A Spermidine synthase; tr  90.8    0.68 2.9E-05   24.7   6.5   82   68-153   113-201 (321)
196 1fp1_D Isoliquiritigenin 2'-O-  90.7    0.28 1.2E-05   26.9   4.5   67   70-150   208-276 (372)
197 2oyr_A UPF0341 protein YHIQ; a  90.3    0.53 2.2E-05   25.4   5.6   70   73-147    90-170 (258)
198 1zq9_A Probable dimethyladenos  90.2    0.79 3.3E-05   24.4   6.4   61   70-135    27-89  (285)
199 3fut_A Dimethyladenosine trans  89.9    0.73 3.1E-05   24.5   6.1   52   72-130    47-98  (271)
200 2i7c_A Spermidine synthase; tr  89.7     1.1 4.5E-05   23.6   7.8   82   68-153    75-163 (283)
201 2vdw_A Vaccinia virus capping   89.6     0.3 1.3E-05   26.8   3.9   75   71-149    48-137 (302)
202 2b2c_A Spermidine synthase; be  89.1     1.2   5E-05   23.3   6.9   82   68-153   105-193 (314)
203 1iy9_A Spermidine synthase; ro  88.1     1.4 5.9E-05   22.9   7.0   82   68-153    72-160 (275)
204 2o07_A Spermidine synthase; st  88.1     1.3 5.6E-05   23.0   6.3   98   51-154    77-181 (304)
205 1kyz_A COMT, caffeic acid 3-O-  87.0    0.38 1.6E-05   26.2   3.0   68   70-151   199-268 (365)
206 2qfm_A Spermine synthase; sper  85.6     1.9 8.1E-05   22.1   6.8   93   53-152   173-278 (364)
207 1vjt_A Alpha-glucosidase; TM07  85.6     1.9 8.2E-05   22.1   6.9   71   74-148    14-95  (483)
208 1qyr_A KSGA, high level kasuga  85.2    0.82 3.4E-05   24.3   4.0   65   58-134    12-78  (252)
209 3lst_A CALO1 methyltransferase  84.8    0.45 1.9E-05   25.7   2.5   87   70-165   183-277 (348)
210 1zg3_A Isoflavanone 4'-O-methy  84.8     1.3 5.4E-05   23.1   4.8   67   71-151   193-261 (358)
211 1u8x_X Maltose-6'-phosphate gl  83.5     2.4  0.0001   21.5   7.9   74   72-149    28-110 (472)
212 1inl_A Spermidine synthase; be  83.1     2.5 0.00011   21.5   7.3   82   68-153    87-175 (296)
213 1yub_A Ermam, rRNA methyltrans  78.9    0.14 5.8E-06   28.7  -1.9   59   70-136    28-88  (245)
214 3htx_A HEN1; HEN1, small RNA m  76.4     4.2 0.00018   20.2   6.3   75   71-150   721-805 (950)
215 1up7_A 6-phospho-beta-glucosid  76.2     4.2 0.00018   20.1   7.0   72   75-150     5-82  (417)
216 3jyo_A Quinate/shikimate dehyd  75.4     4.4 0.00019   20.0   5.1   70   45-120   104-173 (283)
217 1i4w_A Mitochondrial replicati  73.6     4.9 0.00021   19.7   5.8   73   56-133    41-115 (353)
218 2cmg_A Spermidine synthase; tr  72.7    0.41 1.7E-05   26.0  -0.8   81   68-154    69-152 (262)
219 2qe6_A Uncharacterized protein  72.1     2.5  0.0001   21.5   3.0   74   73-150    79-166 (274)
220 1obb_A Maltase, alpha-glucosid  71.4     5.6 0.00023   19.4   7.3   55   74-128     5-66  (480)
221 2ih2_A Modification methylase   70.7     1.9   8E-05   22.1   2.2   67   71-148    39-105 (421)
222 1xj5_A Spermidine synthase 1;   67.2     6.9 0.00029   18.9   8.8   82   68-153   117-206 (334)
223 3ftd_A Dimethyladenosine trans  63.9       8 0.00034   18.5   4.4   58   70-135    30-88  (249)
224 3iyl_W VP1; non-enveloped viru  59.5     4.3 0.00018   20.1   2.3   64   71-147   827-895 (1299)
225 3btn_A Antizyme inhibitor 1; T  57.4      10 0.00043   17.9   3.9   64   16-86    167-240 (448)
226 2py6_A Methyltransferase FKBM;  56.7      11 0.00045   17.8   5.3   52   71-123   226-277 (409)
227 1s6y_A 6-phospho-beta-glucosid  55.7      11 0.00047   17.7   7.4   75   73-151     8-93  (450)
228 1ej6_A Lambda2; icosahedral, n  54.0     7.6 0.00032   18.7   2.8   64   71-147   821-888 (1289)
229 1d5t_A Guanine nucleotide diss  50.3     4.5 0.00019   20.0   1.1   41   21-61    134-180 (433)
230 2bcg_G Secretory pathway GDP d  49.5     4.8  0.0002   19.8   1.2   21   21-41    142-162 (453)
231 2bi7_A UDP-galactopyranose mut  45.5     7.2  0.0003   18.8   1.6   25  139-165   224-248 (384)
232 1dcf_A ETR1 protein; beta-alph  43.6      18 0.00074   16.6   6.5   27  140-167   104-130 (136)
233 3dou_A Ribosomal RNA large sub  42.3     7.3 0.00031   18.8   1.2   72   66-153    20-103 (191)
234 3h7a_A Short chain dehydrogena  41.7      19 0.00079   16.4   4.0  134   19-165    63-228 (252)
235 1v0j_A UDP-galactopyranose mut  39.4     7.7 0.00033   18.6   0.9   21  138-160   234-254 (399)
236 3lkd_A Type I restriction-modi  39.2      21 0.00086   16.2   6.2   76   70-147   220-303 (542)
237 3lad_A Dihydrolipoamide dehydr  38.7      11 0.00046   17.8   1.6   49   72-123   180-236 (476)
238 3hdq_A UDP-galactopyranose mut  38.2       9 0.00038   18.2   1.1   38  124-164   234-272 (397)
239 1i8t_A UDP-galactopyranose mut  38.1      11 0.00048   17.7   1.6   27   37-63    117-143 (367)
240 3bwc_A Spermidine synthase; SA  36.4      23 0.00096   15.9   7.2   83   68-154    92-182 (304)
241 1ej0_A FTSJ; methyltransferase  33.3      12 0.00052   17.4   1.2   72   66-151    17-98  (180)
242 2nyu_A Putative ribosomal RNA   32.7      13 0.00055   17.3   1.2   17   67-83     18-34  (196)
243 2p41_A Type II methyltransfera  31.6      13 0.00055   17.3   1.1   91   68-166    79-183 (305)
244 3opn_A Putative hemolysin; str  31.2      20 0.00084   16.2   2.0   93   64-167    30-130 (232)
245 2oo0_A ODC, ornithine decarbox  29.8      30  0.0012   15.3   3.7   63   17-86    178-250 (471)
246 3evf_A RNA-directed RNA polyme  28.5      16 0.00066   16.9   1.0   92   68-166    71-175 (277)
247 2kyg_C Protein CBFA2T1; protei  27.9      13 0.00054   17.4   0.5   10   75-84      2-11  (38)
248 2okc_A Type I restriction enzy  27.8      32  0.0013   15.1   3.9   74   71-147   171-259 (445)
249 3ic5_A Putative saccharopine d  27.6      32  0.0014   15.0   4.6   71   73-149     6-77  (118)
250 1nvt_A Shikimate 5'-dehydrogen  27.6      32  0.0014   15.0   4.5   67   45-119   105-171 (287)
251 3eld_A Methyltransferase; flav  27.3      17 0.00071   16.6   1.0   13   71-83     81-93  (300)
252 3giw_A Protein of unknown func  26.9      18 0.00076   16.5   1.1   58   73-133    80-141 (277)
253 3fef_A Putative glucosidase LP  26.2      34  0.0014   14.9   6.4   73   73-149     6-83  (450)
254 3lkz_A Non-structural protein   25.0      20 0.00084   16.3   1.0   15   69-83     92-106 (321)
255 2plw_A Ribosomal RNA methyltra  24.9      20 0.00084   16.2   1.0   17   67-83     18-34  (201)
256 2wa2_A Non-structural protein   23.5      22 0.00093   16.0   1.0   92   70-166    81-183 (276)
257 2b9w_A Putative aminooxidase;   23.4      23 0.00099   15.8   1.2   16  141-158   246-261 (424)
258 2oxt_A Nucleoside-2'-O-methylt  23.1      23 0.00097   15.9   1.1   88   69-165    72-174 (265)
259 1rp0_A ARA6, thiazole biosynth  22.9      27  0.0011   15.5   1.4   32   75-108    42-73  (284)
260 3gmb_A 2-methyl-3-hydroxypyrid  22.9      27  0.0011   15.5   1.4   35   71-108    46-80  (415)
261 2zzc_A Thioredoxin reductase 1  22.4      41  0.0017   14.5   2.5   48   57-107   189-236 (513)
262 3nrn_A Uncharacterized protein  22.2      27  0.0012   15.4   1.3   17  141-159   231-247 (421)
263 3gcz_A Polyprotein; flavivirus  22.0      25   0.001   15.7   1.0   89   69-166    88-191 (282)
264 2jah_A Clavulanic acid dehydro  21.4      43  0.0018   14.3   6.5   44   70-123   132-175 (247)
265 3grp_A 3-oxoacyl-(acyl carrier  21.3      43  0.0018   14.3   4.0   44   71-124   151-194 (266)
266 3o8q_A Shikimate 5-dehydrogena  21.1      43  0.0018   14.3   6.9   70   45-120   103-172 (281)
267 2dam_A ETEA protein; KIAA0887,  20.3      45  0.0019   14.2   3.3   35   18-62     11-48  (67)
268 3ka7_A Oxidoreductase; structu  20.1      31  0.0013   15.1   1.3   10  140-149   239-248 (425)

No 1  
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=100.00  E-value=0  Score=317.09  Aligned_cols=156  Identities=24%  Similarity=0.433  Sum_probs=143.2

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC--CCCCCEEECCCCCHHH
Q ss_conf             85136666417999899999999999999846321304308999998986463564310012--3443111114677335
Q gi|254780807|r    9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGGFPG   86 (168)
Q Consensus         9 ~~~~~~l~~~~~ls~eq~~~l~~y~~ll~~~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~--~~~~ilDiGSGaGfPG   86 (168)
                      -+...+-..++.+|++|+++|..|+++|.+||+++||||+++.+++|.+||+||++++.+++  ...+++||||||||||
T Consensus         6 ~l~~~l~~~g~~~s~~~~~~l~~y~~lL~~~N~~~NLt~~~~~~~i~~~Hi~DSl~~~~~i~~~~~~~ilDiGSGaGfPG   85 (240)
T 1xdz_A            6 EFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPS   85 (240)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHSCCCSCCSHHHHHHHTHHHHHGGGGTSCGGGCCEEEEECSSSCTTH
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH
T ss_conf             99999998599999999999999999999847847788639989999988997799998754356886987259998278


Q ss_pred             HHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHH---HCCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf             656522755466347875000038999999999738980-99804266533---12479869999147998999998488
Q gi|254780807|r   87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFP  162 (168)
Q Consensus        87 i~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~---~~~~~~d~v~sRA~a~l~~ll~~~~p  162 (168)
                      |||||++|+.+   |||+||++||++||++++.+|+|+| +++++|+|+..   +++.+||+||||||++++.+++++.|
T Consensus        86 i~LaI~~p~~~---v~Lves~~KK~~FL~~v~~~L~L~nv~v~~~R~E~~~~~~~~~~~fD~v~sRAva~l~~ll~~~~~  162 (240)
T 1xdz_A           86 LPIKICFPHLH---VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLP  162 (240)
T ss_dssp             HHHHHHCTTCE---EEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECCSCHHHHHHHHGG
T ss_pred             HHHHHHCCCCC---CEEEECHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHH
T ss_conf             99998678754---188755687789999999983888737873046550322123566656986100576889999998


Q ss_pred             HHCCC
Q ss_conf             52067
Q gi|254780807|r  163 WLYQK  167 (168)
Q Consensus       163 llk~k  167 (168)
                      ++++.
T Consensus       163 ~lk~~  167 (240)
T 1xdz_A          163 LVKKN  167 (240)
T ss_dssp             GEEEE
T ss_pred             HCCCC
T ss_conf             62789


No 2  
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=100.00  E-value=0  Score=311.72  Aligned_cols=152  Identities=24%  Similarity=0.373  Sum_probs=139.2

Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHH
Q ss_conf             13666641799989999999999999984632130430899999898646356431001234431111146773356565
Q gi|254780807|r   11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS   90 (168)
Q Consensus        11 ~~~~l~~~~~ls~eq~~~l~~y~~ll~~~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~la   90 (168)
                      ...+-..++.+|++|.++|..|+++|.+||+++||||+++.+++|.|||+||++++++++ +.+++|+||||||||||||
T Consensus         6 ~~~l~~~g~~ls~~q~~~l~~y~~~l~~~N~~~NLt~~~~~~~~~~~Hi~DSl~~~~~~~-~~~ilDiGsGaG~PGi~la   84 (207)
T 1jsx_A            6 SLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQ-GERFIDVGTGPGLPGIPLS   84 (207)
T ss_dssp             HHHHHTTTCCCCHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHGGGCC-SSEEEEETCTTTTTHHHHH
T ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHC-CCEEEECCCCCCCHHHHHH
T ss_conf             999998399999999999999999999967955558779989999999999998876423-8879861699861547898


Q ss_pred             HCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf             22755466347875000038999999999738980-998042665331247986999914799899999848852067
Q gi|254780807|r   91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK  167 (168)
Q Consensus        91 I~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~sRA~a~l~~ll~~~~pllk~k  167 (168)
                      |++|+.+   ++|+||++||++||++++++|+|+| +++++|+|+... ..+||+||||||++++.+++|+.|++++.
T Consensus        85 I~~p~~~---~~Lve~~~Kk~~fL~~~~~~L~L~nv~v~~~R~e~~~~-~~~fD~v~sRAva~~~~ll~~~~~llk~~  158 (207)
T 1jsx_A           85 IVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHLPGEQ  158 (207)
T ss_dssp             HHCTTSE---EEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC-CSCEEEEECSCSSSHHHHHHHHTTSEEEE
T ss_pred             HHCCCCE---EEEEECHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCC-CCCHHHHHHHHCCCHHHHHHHHHHHCCCC
T ss_conf             7488508---99970658899999999997399873045213453144-43232555643358999999999854899


No 3  
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=100.00  E-value=0  Score=306.07  Aligned_cols=158  Identities=26%  Similarity=0.364  Sum_probs=141.7

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCC--CCCCCEEECCCCC
Q ss_conf             68885136666417999899999999999999846321304308999998986463564310012--3443111114677
Q gi|254780807|r    6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGG   83 (168)
Q Consensus         6 ~n~~~~~~~l~~~~~ls~eq~~~l~~y~~ll~~~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~--~~~~ilDiGSGaG   83 (168)
                      ..+++.+..-..++.+++ |+++|..|+++|.+||+++||||+++.+++|.|||+||+++.++..  .+.+++|||||||
T Consensus        14 ~~~~l~~~~~~lg~~~~~-q~~~l~~y~~lL~~wN~~~NLt~~~~~~~~~~rHilDSl~i~~~~~~~~~~~vlDiGSGaG   92 (249)
T 3g89_A           14 GRALLLEGGKALGLDLKP-HLEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAG   92 (249)
T ss_dssp             HHHHHHHHHHHHTCCCGG-GHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTT
T ss_pred             HHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
T ss_conf             999999999983998389-9999999999999855553220458989999999999998753146778978984269999


Q ss_pred             HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHH---HCCCCCCEEEECCCCCHHHHHHH
Q ss_conf             335656522755466347875000038999999999738980-99804266533---12479869999147998999998
Q gi|254780807|r   84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEY  159 (168)
Q Consensus        84 fPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~---~~~~~~d~v~sRA~a~l~~ll~~  159 (168)
                      ||||||||++|+.+   ||||||++||++||++++++|+|+| +|+++|+|++.   .+...||+||||||++++.++++
T Consensus        93 ~PGipLAI~~p~~~---v~LvEs~~KK~~FL~~v~~~LgL~Nv~vi~~R~E~~~~~~~~~~~fD~v~aRAva~l~~ll~~  169 (249)
T 3g89_A           93 FPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSEL  169 (249)
T ss_dssp             TTHHHHHHHCTTCE---EEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESSCCHHHHHHH
T ss_pred             CCEEEEEEECCCCE---EEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHH
T ss_conf             64057878369832---999808278999999999982999845887787870433123555005765552549999998


Q ss_pred             HHHHHCCC
Q ss_conf             48852067
Q gi|254780807|r  160 SFPWLYQK  167 (168)
Q Consensus       160 ~~pllk~k  167 (168)
                      +.|++++.
T Consensus       170 ~~~~lk~~  177 (249)
T 3g89_A          170 LLPFLEVG  177 (249)
T ss_dssp             HGGGEEEE
T ss_pred             HHHHCCCC
T ss_conf             64431679


No 4  
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.65  E-value=1.1e-07  Score=63.92  Aligned_cols=95  Identities=17%  Similarity=0.092  Sum_probs=77.6

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             12344311111467733565652275546634787500003899999999973898-09980426653312479869999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      ++.+.+|+|||+|.|.....++=.+|..   +|+.+|.+..-....+....+.+.+ .++..+.+++++-..++||+|+|
T Consensus        35 ~~pg~rVLDiGcG~G~~~~~la~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~sfD~V~~  111 (276)
T 3mgg_A           35 YPPGAKVLEAGCGIGAQTVILAKNNPDA---EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFV  111 (276)
T ss_dssp             CCTTCEEEETTCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCCCCHHH
T ss_conf             9999989995585889999999879997---8999979567632222112211556642153352320477788121111


Q ss_pred             CC----CCCHHHHHHHHHHHHCC
Q ss_conf             14----79989999984885206
Q gi|254780807|r  148 RA----LADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA----~a~l~~ll~~~~pllk~  166 (168)
                      +.    +.+...++.-..+.||+
T Consensus       112 ~~~l~~~~d~~~~l~~~~rvLkp  134 (276)
T 3mgg_A          112 CFVLEHLQSPEEALKSLKKVLKP  134 (276)
T ss_dssp             ESCGGGCSCHHHHHHHHHHHEEE
T ss_pred             HHHHHHCHHHHHHHHHHHHHCCC
T ss_conf             12463130599999999997480


No 5  
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxylating); porphyrin metabolism, S-adenosyl-methionine, structural genomics; 1.80A {Geobacter metallireducens gs-15}
Probab=98.61  E-value=2.7e-07  Score=61.68  Aligned_cols=96  Identities=16%  Similarity=0.127  Sum_probs=77.3

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEE
Q ss_conf             123443111114677335656522755466347875000038999999999738980-9980426653312479869999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      ++.+..++|+|+|.|.-++.+|...|+-   .|+.+|.+...+...++-+++++..+ +++++...+.......||.|+.
T Consensus        38 l~pg~~VLDiG~GsG~la~~~a~~~~~~---~V~aiD~~~~~~~~a~~n~~~~g~~~~~~~~g~~~~~~~~~~~~D~i~i  114 (204)
T 3e05_A           38 LQDDLVMWDIGAGSASVSIEASNLMPNG---RIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFI  114 (204)
T ss_dssp             CCTTCEEEEETCTTCHHHHHHHHHCTTS---EEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEE
T ss_pred             CCCCCEEEEEEEEHHHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEE
T ss_conf             9993999998310789999999978996---7999949999999999999981998589973453234543578769999


Q ss_pred             CCC-CCHHHHHHHHHHHHCCC
Q ss_conf             147-99899999848852067
Q gi|254780807|r  148 RAL-ADLDTLLEYSFPWLYQK  167 (168)
Q Consensus       148 RA~-a~l~~ll~~~~pllk~k  167 (168)
                      -.. ..+..+++.+...|++.
T Consensus       115 ~~~~~~~~~~l~~~~~~L~pG  135 (204)
T 3e05_A          115 GGSGGMLEEIIDAVDRRLKSE  135 (204)
T ss_dssp             SCCTTCHHHHHHHHHHHCCTT
T ss_pred             CCCCCCHHHHHHHHHHHCCCC
T ss_conf             065523589999999854899


No 6  
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.60  E-value=6.3e-07  Score=59.60  Aligned_cols=106  Identities=13%  Similarity=0.036  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHH
Q ss_conf             86463564310012344311111467733565652275546634787500003899999999973898--0998042665
Q gi|254780807|r   57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQE  134 (168)
Q Consensus        57 rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~  134 (168)
                      .++++-+.....++.+.+|+|||+|.|.+.+.+|-.+    +..|+.+|.+..-+...++...+.++.  ++++++.+++
T Consensus        68 ~~~~~~l~~~~~l~~~~~VLDiGCG~G~~~~~la~~~----g~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~  143 (297)
T 2o57_A           68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE  143 (297)
T ss_dssp             HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS
T ss_pred             HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHC----CCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
T ss_conf             9999999984698999989998899998999999963----985999967427788887644320567662278612225


Q ss_pred             HHHCCCCCCEEEECC----CCCHHHHHHHHHHHHCC
Q ss_conf             331247986999914----79989999984885206
Q gi|254780807|r  135 APQMITTCDVISARA----LADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       135 ~~~~~~~~d~v~sRA----~a~l~~ll~~~~pllk~  166 (168)
                      ++-..+.||.|+|..    +..+..++.-+...||+
T Consensus       144 l~~~~~~fD~V~~~~~l~h~~d~~~~l~~~~r~Lkp  179 (297)
T 2o57_A          144 IPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKP  179 (297)
T ss_dssp             CSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred             CCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHCCC
T ss_conf             676665110999857244237999999999997198


No 7  
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: MSE; 1.90A {Bacillus halodurans c-125}
Probab=98.58  E-value=2.4e-07  Score=62.03  Aligned_cols=94  Identities=13%  Similarity=0.171  Sum_probs=78.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHH-HH--CCCCCCE
Q ss_conf             2344311111467733565652275546634787500003899999999973898--09980426653-31--2479869
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEA-PQ--MITTCDV  144 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~-~~--~~~~~d~  144 (168)
                      .++.+|++||||.|+.++.+|-..|+-   .|+.+|.+.+.....++..++.|++  ++++.+++.+. +.  ....||+
T Consensus        53 ~~~~~VLEIGtg~G~Stl~la~~~p~~---~v~tiD~~~~~~~~A~~~~~~~gl~~~I~~~~gda~d~l~~l~~~~~fD~  129 (233)
T 2gpy_A           53 AAPARILEIGTAIGYSAIRMAQALPEA---TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDV  129 (233)
T ss_dssp             HCCSEEEEECCTTSHHHHHHHHHCTTC---EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred             HCCCEEEEEECCCCHHHHHHHHHCCCC---EEEEEEECHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCE
T ss_conf             589989996112129999999878997---79999704899999999999974212112653328777775113577628


Q ss_pred             EEECCC-CCHHHHHHHHHHHHCC
Q ss_conf             999147-9989999984885206
Q gi|254780807|r  145 ISARAL-ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       145 v~sRA~-a~l~~ll~~~~pllk~  166 (168)
                      |...|- ......++.+.++|++
T Consensus       130 ifiD~~k~~~~~~~~~~~~lL~~  152 (233)
T 2gpy_A          130 LFIDAAKGQYRRFFDMYSPMVRP  152 (233)
T ss_dssp             EEEEGGGSCHHHHHHHHGGGEEE
T ss_pred             EEECCCHHHHHHHHHHHHHHCCC
T ss_conf             99727667689999999834288


No 8  
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research center for structural genomics, protein structure initiative, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.53  E-value=2.4e-07  Score=61.96  Aligned_cols=80  Identities=11%  Similarity=0.087  Sum_probs=63.0

Q ss_pred             HHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHH-HHCCCCCC
Q ss_conf             31001234431111146773356565227554663478750000389999999997389809980426653-31247986
Q gi|254780807|r   65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQMITTCD  143 (168)
Q Consensus        65 ~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~-~~~~~~~d  143 (168)
                      ...+.+.+.+|+|+|||+|.-++.+|-.+|+.+   |+.+|-++.-+...+.-++..+++..+........ +...++||
T Consensus        49 ~~~~~~~~~~vLDig~G~G~~~~~~a~~~~~~~---v~~vDi~~~~~~~a~~n~~~~~~~~~i~~~~~~~~~~~~~~~fD  125 (230)
T 3evz_A           49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCK---VTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFD  125 (230)
T ss_dssp             HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCE---EEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEE
T ss_pred             HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCE---EEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCC
T ss_conf             984578989899940744399999999779987---99998863112467766886066517998521101213576524


Q ss_pred             EEEE
Q ss_conf             9999
Q gi|254780807|r  144 VISA  147 (168)
Q Consensus       144 ~v~s  147 (168)
                      +|+|
T Consensus       126 ~Iv~  129 (230)
T 3evz_A          126 VIFS  129 (230)
T ss_dssp             EEEE
T ss_pred             EEEE
T ss_conf             8998


No 9  
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1, methyltransferase domain, structural genomics; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.52  E-value=2.5e-07  Score=61.95  Aligned_cols=94  Identities=12%  Similarity=0.091  Sum_probs=69.9

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             12344311111467733565652275546634787500003899999999973898099804266533124798699991
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+++|+|+|+|.|...+.++.-    ++.+|+.+|-+.+-+...++...+.+++++++++.+++++-..+.||+|+|+
T Consensus        21 ~~~~~~VLDiGcG~G~~~~~~~~~----~~~~v~gvD~S~~~i~~a~~~~~~~~~~v~~~~~d~~~l~~~~~sfD~I~s~   96 (209)
T 2p8j_A           21 SNLDKTVLDCGAGGDLPPLSIFVE----DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSY   96 (209)
T ss_dssp             SSSCSEEEEESCCSSSCTHHHHHH----TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEEC
T ss_pred             CCCCCEEEEEECCCCHHHHHHHHH----CCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCHHHHH
T ss_conf             069898999727889999999985----8998999959799999998622035743653002022368543423388876


Q ss_pred             CCCC------HHHHHHHHHHHHCC
Q ss_conf             4799------89999984885206
Q gi|254780807|r  149 ALAD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a~------l~~ll~~~~pllk~  166 (168)
                      .+-.      +...++-....||+
T Consensus        97 ~~l~h~~~~~~~~~l~~~~r~Lkp  120 (209)
T 2p8j_A           97 GTIFHMRKNDVKEAIDEIKRVLKP  120 (209)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred             HHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             678728847899999999987585


No 10 
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.30A {Bacillus cereus atcc 14579} PDB: 2gh1_A
Probab=98.49  E-value=4.3e-07  Score=60.56  Aligned_cols=95  Identities=17%  Similarity=0.182  Sum_probs=75.6

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             12344311111467733565652275546634787500003899999999973898099804266533124798699991
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      .+++.+|+|+|+|.|.-++.+|=..|.  +..|+.+|.++.-+...++.....+++++.+++.+++++- ..+||+|+++
T Consensus        20 ~~~~~~ILDiGcG~G~~~~~la~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~V~~~   96 (284)
T 3gu3_A           20 ITKPVHIVDYGCGYGYLGLVLMPLLPE--GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDKYDIAICH   96 (284)
T ss_dssp             CCSCCEEEEETCTTTHHHHHHTTTSCT--TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSCEEEEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCC--CCEEEEECCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCC-CCCEEEEEEH
T ss_conf             699897999548798999999985779--9889998498999999998666414200120011124798-9975799886


Q ss_pred             CC----CCHHHHHHHHHHHHCC
Q ss_conf             47----9989999984885206
Q gi|254780807|r  149 AL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~----a~l~~ll~~~~pllk~  166 (168)
                      .+    .++..+++-....||+
T Consensus        97 ~~l~h~~d~~~~l~~~~~~Lkp  118 (284)
T 3gu3_A           97 AFLLHMTTPETMLQKMIHSVKK  118 (284)
T ss_dssp             SCGGGCSSHHHHHHHHHHTEEE
T ss_pred             HHHHCCCCHHHHHHHHHHHCCC
T ss_conf             4765678899999999998388


No 11 
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A
Probab=98.47  E-value=4.5e-07  Score=60.42  Aligned_cols=100  Identities=13%  Similarity=0.127  Sum_probs=74.5

Q ss_pred             HHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCC
Q ss_conf             64310012344311111467733565652275546634787500003899999999973898--0998042665331247
Q gi|254780807|r   63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMIT  140 (168)
Q Consensus        63 l~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~  140 (168)
                      +...+-.+.+.+|+|||+|.|.-.+.+|=..+    ..|+.+|.++.-+.+.++-..+.++.  ++++++.+++++-..+
T Consensus        38 l~~l~~l~~~~~VLDIGCG~G~~~~~lA~~~~----~~V~giD~s~~~l~~a~~~~~~~~l~~~v~~~~~d~~~l~~~~~  113 (267)
T 3kkz_A           38 LSFIDNLTEKSLIADIGCGTGGQTMVLAGHVT----GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNE  113 (267)
T ss_dssp             HTTCCCCCTTCEEEEETCTTCHHHHHHHTTCS----SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred             HHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC----CEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCC
T ss_conf             98172799999899962789799999997479----98999979731658988732323444331001001235677888


Q ss_pred             CCCEEEECCCC---CHHHHHHHHHHHHCC
Q ss_conf             98699991479---989999984885206
Q gi|254780807|r  141 TCDVISARALA---DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       141 ~~d~v~sRA~a---~l~~ll~~~~pllk~  166 (168)
                      +||.|+|.++.   +.+..+.-...+||+
T Consensus       114 ~FD~I~s~~~l~~~~~~~~l~~i~r~Lkp  142 (267)
T 3kkz_A          114 ELDLIWSEGAIYNIGFERGLNEWRKYLKK  142 (267)
T ss_dssp             CEEEEEESSCGGGTCHHHHHHHHGGGEEE
T ss_pred             CEEEEEECHHHHHCCHHHHHHHHHHHCCC
T ss_conf             46689740437838989999999996597


No 12 
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.43  E-value=7.4e-07  Score=59.17  Aligned_cols=98  Identities=13%  Similarity=0.133  Sum_probs=76.5

Q ss_pred             HHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCC
Q ss_conf             3100123443111114677335656522755466347875000038999999999738980-998042665331247986
Q gi|254780807|r   65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCD  143 (168)
Q Consensus        65 ~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d  143 (168)
                      +...+..+..++|+|+|.|.-+|++|-..+..   .|+.+|.++..+.++++-++..++++ .++++.+.++. ...+||
T Consensus       113 i~~~v~~ge~VlDl~aG~G~~~i~~ak~~~~~---~V~aiDinp~av~~l~~N~~~N~v~n~~~i~~D~r~~~-~~~~fD  188 (272)
T 3a27_A          113 MAFISNENEVVVDMFAGIGYFTIPLAKYSKPK---LVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE-LKDVAD  188 (272)
T ss_dssp             HHTSCCTTCEEEETTCTTTTTHHHHHHHTCCS---EEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-CTTCEE
T ss_pred             HHHCCCCCCEEEEECCCCCHHHHHHHHCCCCE---EEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC-CCCCCC
T ss_conf             87345899999993786588999987506950---99999599999999999999849997599927765345-578888


Q ss_pred             EEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             99991479989999984885206
Q gi|254780807|r  144 VISARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       144 ~v~sRA~a~l~~ll~~~~pllk~  166 (168)
                      .|+.-.......+++.+.++|++
T Consensus       189 ~Vimn~p~~s~~fl~~a~~~lk~  211 (272)
T 3a27_A          189 RVIMGYVHKTHKFLDKTFEFLKD  211 (272)
T ss_dssp             EEEECCCSSGGGGHHHHHHHEEE
T ss_pred             EEEECCCCCHHHHHHHHHHHCCC
T ss_conf             99978951279999999996289


No 13 
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.39  E-value=2.1e-06  Score=56.58  Aligned_cols=94  Identities=12%  Similarity=-0.008  Sum_probs=78.0

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHH-HHCCCCCCEEEEC
Q ss_conf             3443111114677335656522755466347875000038999999999738980-9980426653-3124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-PQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~-~~~~~~~d~v~sR  148 (168)
                      .+.+++|+|+|.|.-++.++-..|..   .|+.+|.+...+...++-..+.++.+ ++++..+.+. ......+|.+..-
T Consensus        25 pg~~vLDiGcG~G~~a~~~a~~~~~~---~V~avD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  101 (178)
T 3hm2_A           25 PHETLWDIGGGSGSIAIEWLRSTPQT---TAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG  101 (178)
T ss_dssp             TTEEEEEESTTTTHHHHHHHTTSSSE---EEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCCCEEEEC
T ss_conf             97999997668888999999968977---698850899999999999998199978999943620022467888899992


Q ss_pred             CCCCHHHHHHHHHHHHCCC
Q ss_conf             4799899999848852067
Q gi|254780807|r  149 ALADLDTLLEYSFPWLYQK  167 (168)
Q Consensus       149 A~a~l~~ll~~~~pllk~k  167 (168)
                      ...+++.+++-+.+.||+.
T Consensus       102 ~~~~~~~~l~~~~~~LkpG  120 (178)
T 3hm2_A          102 GGLTAPGVFAAAWKRLPVG  120 (178)
T ss_dssp             C-TTCTTHHHHHHHTCCTT
T ss_pred             CCCCHHHHHHHHHHHCCCC
T ss_conf             7335799999999847998


No 14 
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.38  E-value=1.4e-06  Score=57.55  Aligned_cols=104  Identities=16%  Similarity=0.151  Sum_probs=76.8

Q ss_pred             HHHHHHHHH-HC--CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHH
Q ss_conf             646356431-00--123443111114677335656522755466347875000038999999999738980-99804266
Q gi|254780807|r   58 HVEDSLRVF-QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ  133 (168)
Q Consensus        58 Hi~DSl~~~-~~--~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e  133 (168)
                      |--+|+.+. ..  ++.+.+|+|||+|.|.-...+|=.     ...|+.||.++.-+...+.-....++++ .++++.++
T Consensus         5 ~~~~~~~~l~~~~~~~pg~rVLDiGCGtG~~~~~la~~-----~~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~d~~   79 (239)
T 1xxl_A            5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY-----VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE   79 (239)
T ss_dssp             -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-----SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf             01658999999858999898999588685999999970-----9979999799999999998654305654000102223


Q ss_pred             HHHHCCCCCCEEEECCCC----CHHHHHHHHHHHHCC
Q ss_conf             533124798699991479----989999984885206
Q gi|254780807|r  134 EAPQMITTCDVISARALA----DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       134 ~~~~~~~~~d~v~sRA~a----~l~~ll~~~~pllk~  166 (168)
                      +++-...+||+|+|..+-    .+..+++-..+.||+
T Consensus        80 ~l~~~d~~fD~v~~~~~l~~~~d~~~~l~ei~r~Lkp  116 (239)
T 1xxl_A           80 SLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQ  116 (239)
T ss_dssp             BCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred             CCCCCCCCEEEEHHCCCHHCCCCHHHHHHHHHHHCCC
T ss_conf             5688887365302045122246899999999998083


No 15 
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.38  E-value=1.9e-06  Score=56.87  Aligned_cols=120  Identities=15%  Similarity=0.127  Sum_probs=80.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHH-------------CCC-----CCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECC
Q ss_conf             799989999999999999984-------------632-----13043089999989864635643100123443111114
Q gi|254780807|r   19 YNVSRETLEKLEYFYFLFLKW-------------SKK-----INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS   80 (168)
Q Consensus        19 ~~ls~eq~~~l~~y~~ll~~~-------------N~~-----~NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGS   80 (168)
                      ..+++++.+++....+...+-             +..     -=|+=+-+.|.+.+ ..+.     .....+.+++|+||
T Consensus        45 ~~l~~~~~~~~~~~~~rr~~g~PlqYI~G~~~F~g~~f~v~~~vlIPRpeTE~lv~-~~l~-----~~~~~~~~ilDlgt  118 (276)
T 2b3t_A           45 TQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVE-QALA-----RLPEQPCRILDLGT  118 (276)
T ss_dssp             CBCCHHHHHHHHHHHHHHHTTCCHHHHSCEEEETTEEEECCTTSCCCCTTHHHHHH-HHHH-----HSCSSCCEEEEETC
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCCEEEECCCCCCCCCHHHHHHH-HHHH-----HCCCCCCEEEEECC
T ss_conf             88999999999999999986996679738237879278758877069976999999-9987-----51457861764146


Q ss_pred             CCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             67733565652275546634787500003899999999973898-099804266533124798699991
Q gi|254780807|r   81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        81 GaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      |.|.=|+.+|..+|+.+   |+.+|-+.+-+...++-++.++++ +.++++..-+... ..+||+|+|-
T Consensus       119 GsG~I~i~la~~~p~~~---v~a~Dis~~Al~~A~~Na~~~~~~~v~~~~~D~~~~~~-~~~fDlIvsN  183 (276)
T 2b3t_A          119 GTGAIALALASERPDCE---IIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA-GQQFAMIVSN  183 (276)
T ss_dssp             TTSHHHHHHHHHCTTSE---EEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT-TCCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCCE---EEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC-CCCEEEEEEC
T ss_conf             53299999998689875---88641766889999999997499877999757643367-8841578856


No 16 
>1or8_A Protein arginine N-methyltransferase 1; protein arginine methylation, adoMet-dependent methylation, transferase; HET: SAH; 2.35A {Rattus norvegicus} SCOP: c.66.1.6 PDB: 1orh_A* 1ori_A*
Probab=98.38  E-value=2e-06  Score=56.74  Aligned_cols=92  Identities=18%  Similarity=0.247  Sum_probs=69.7

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             2344311111467733565652275546634787500003899999999973898--09980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      .+++.|+|+|+|.|+.++..|-.    ...+|+.+|.++ -+...++++...++.  +++++++++++.-..++||+|+|
T Consensus        56 ~~~~~VLDiG~G~G~ls~~aa~~----Ga~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~~~~~~~~l~~~~~~~Dvivs  130 (340)
T 1or8_A           56 FKDKVVLDVGSGTGILCMFAAKA----GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIIS  130 (340)
T ss_dssp             HTTCEEEEETCTTSHHHHHHHHT----TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHC----CCCEEEEECCHH-HHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCEEEE
T ss_conf             59497999837887999999980----898899964619-9999999999728783279997313430378653107997


Q ss_pred             CCC-----C--CHHHHHHHHHHHHCC
Q ss_conf             147-----9--989999984885206
Q gi|254780807|r  148 RAL-----A--DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA~-----a--~l~~ll~~~~pllk~  166 (168)
                      --+     .  .++.++....++|++
T Consensus       131 E~~~~~l~~e~~l~~~~~a~~rlLkp  156 (340)
T 1or8_A          131 EWMGYCLFYESMLNTVLHARDKWLAP  156 (340)
T ss_dssp             CCCBBTBTBTCCHHHHHHHHHHHEEE
T ss_pred             EECHHCCCCHHHHHHHHHHHHHHCCC
T ss_conf             50101044067789999999962778


No 17 
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.37  E-value=1.8e-06  Score=56.99  Aligned_cols=127  Identities=13%  Similarity=0.124  Sum_probs=82.3

Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHHH-------------CCCC-----CEEEECCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             666641799989999999999999984-------------6321-----3043089999989864635643100123443
Q gi|254780807|r   13 NYLLNTYNVSRETLEKLEYFYFLFLKW-------------SKKI-----NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI   74 (168)
Q Consensus        13 ~~l~~~~~ls~eq~~~l~~y~~ll~~~-------------N~~~-----NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~   74 (168)
                      .++++...++.++.+++....+...+-             +..+     =|+=+-+.| .+...+++..    .......
T Consensus        52 ~l~~~~~~l~~~~~~~~~~li~rR~~g~Pl~YI~G~~~F~g~~f~V~~~VLIPRpeTE-~Lve~~~~~~----~~~~~~~  126 (284)
T 1nv8_A           52 DLFLKDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETE-ELVELALELI----RKYGIKT  126 (284)
T ss_dssp             GGCCSSCCCCHHHHHHHHHHHHHHHTTCCHHHHHTEEEETTEEEECCTTSCCCCTTHH-HHHHHHHHHH----HHHTCCE
T ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCEEEECCEEEEEECCCCCCCCHHH-HHHHHHHHHH----HCCCCCE
T ss_conf             9823778899999999999999997699788930242796838998166412887589-9999888765----0378867


Q ss_pred             CEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHHH-HHCCCCCCEEEEC
Q ss_conf             111114677335656522755466347875000038999999999738980--9980426653-3124798699991
Q gi|254780807|r   75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEA-PQMITTCDVISAR  148 (168)
Q Consensus        75 ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~~-~~~~~~~d~v~sR  148 (168)
                      ++|+|||+|.=|+.+| -+|+.   .|+.+|.+.+-+...++-++++++.+  .++++...+. +....+||+|+|-
T Consensus       127 vlDlgtGSG~I~isla-~~p~~---~V~avDiS~~Al~vA~~Na~~~~~~~~~~~~~~d~~~~~~~~~~~fDlIVSN  199 (284)
T 1nv8_A          127 VADIGTGSGAIGVSVA-KFSDA---IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSN  199 (284)
T ss_dssp             EEEESCTTSHHHHHHH-HHSSC---EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEEC
T ss_pred             EEEEECCHHHHHHHHH-HHHCC---CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEC
T ss_conf             9986046059887676-52014---5167639799999999999844898629999632100141126753089967


No 18 
>3b3f_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, catalytic domain, alternative splicing, chromatin regulator; HET: SAH; 2.20A {Rattus norvegicus} PDB: 3b3g_A 2v74_B* 2v7e_A
Probab=98.36  E-value=2.3e-06  Score=56.32  Aligned_cols=90  Identities=14%  Similarity=0.203  Sum_probs=66.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      +++.|+|||+|.|+-++..|-.    ....|+.+|++. -+...++.+++.++.  +++++++++++. ..+++|+|+|-
T Consensus        46 ~~~~VLDiGcG~G~ls~~aa~~----Ga~~V~~~e~s~-~~~~~~~~~~~n~~~~~I~~i~~~~~~l~-l~~~~Dvivse  119 (341)
T 3b3f_A           46 KDKIVLDVGCGSGILSFFAAQA----GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LPEQVDIIISE  119 (341)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHT----TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSCEEEEECC
T ss_pred             CCCEEEEECCCCCHHHHHHHHC----CCCEEEEEECCH-HHHHHHHHHHHCCCCCCCEEEEEEHHHCC-CCCCCCEEEEE
T ss_conf             9798999666853999999976----999899997909-99999999998599864007960366525-67663379875


Q ss_pred             CCCC------HHHHHHHHHHHHCC
Q ss_conf             4799------89999984885206
Q gi|254780807|r  149 ALAD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a~------l~~ll~~~~pllk~  166 (168)
                      -+..      +...+..+.++||+
T Consensus       120 ~~~~~l~~E~~~~~l~~ar~~Lkp  143 (341)
T 3b3f_A          120 PMGYMLFNERMLESYLHAKKYLKP  143 (341)
T ss_dssp             CCBTTBTTTSHHHHHHHGGGGEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             011124442146679999973578


No 19 
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.34  E-value=1.6e-06  Score=57.20  Aligned_cols=86  Identities=14%  Similarity=0.196  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHCCC---CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHH
Q ss_conf             6463564310012---344311111467733565652275546634787500003899999999973898--09980426
Q gi|254780807|r   58 HVEDSLRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRI  132 (168)
Q Consensus        58 Hi~DSl~~~~~~~---~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~  132 (168)
                      --.|++.+..+..   .+.+++|+|+|.|.-++.+|- +++   ..|+.||.++.-+...++-++..++.  ++++++.+
T Consensus        33 ~~~D~~lLa~~~~~~~~~~~vLDlG~G~G~~~l~la~-~~~---~~v~~vDi~~~~~~~A~~N~~~n~l~~~v~~~~~D~  108 (259)
T 3lpm_A           33 FSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLST-RTK---AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDL  108 (259)
T ss_dssp             CCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHT-TCC---CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCG
T ss_pred             CCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHH-CCC---CEEEEEECCHHHHHHHHHHHHHCCCCHHHEEEEHHH
T ss_conf             6217999998850866799799972585899999986-789---889999998999999999998607330112330011


Q ss_pred             HHHHHC--CCCCCEEEE
Q ss_conf             653312--479869999
Q gi|254780807|r  133 QEAPQM--ITTCDVISA  147 (168)
Q Consensus       133 e~~~~~--~~~~d~v~s  147 (168)
                      .++...  .++||+|++
T Consensus       109 ~~~~~~~~~~~fD~Iv~  125 (259)
T 3lpm_A          109 KKITDLIPKERADIVTC  125 (259)
T ss_dssp             GGGGGTSCTTCEEEEEE
T ss_pred             HHHHHCCCCCCCCEEEE
T ss_conf             10001035542547885


No 20 
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.33  E-value=1.8e-06  Score=56.91  Aligned_cols=96  Identities=11%  Similarity=-0.035  Sum_probs=72.5

Q ss_pred             HHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEE
Q ss_conf             10012344311111467733565652275546634787500003899999999973898099804266533124798699
Q gi|254780807|r   66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI  145 (168)
Q Consensus        66 ~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v  145 (168)
                      .++++++.+|+|||+|.|.=.+++|=     .+..|+.+|.+..-+...++-....+.+...+++.+++++-..+.||+|
T Consensus        33 ~~~~~~~~rVLDiGCG~G~~~~~la~-----~~~~v~g~D~s~~~l~~ak~~~~~~~~~~~~~~~d~~~l~~~~~sfD~V  107 (227)
T 1ve3_A           33 MKYMKKRGKVLDLACGVGGFSFLLED-----YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYV  107 (227)
T ss_dssp             HHSCCSCCEEEEETCTTSHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEE
T ss_pred             HHHCCCCCEEEEECCCCCHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf             98479989799986888899999996-----5998999967504689999988752765333346533488767705899


Q ss_pred             EECCCCC------HHHHHHHHHHHHCC
Q ss_conf             9914799------89999984885206
Q gi|254780807|r  146 SARALAD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       146 ~sRA~a~------l~~ll~~~~pllk~  166 (168)
                      +|..+-.      +..+++-+...||+
T Consensus       108 ~~~~~l~~~~~~d~~~~l~~~~r~Lkp  134 (227)
T 1ve3_A          108 IFIDSIVHFEPLELNQVFKEVRRVLKP  134 (227)
T ss_dssp             EEESCGGGCCHHHHHHHHHHHHHHEEE
T ss_pred             EEEHHHHHCCHHHHHHHHHHHHHHCCC
T ss_conf             860017729876899999999998380


No 21 
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; NP_988299.1, structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.33  E-value=1.6e-06  Score=57.24  Aligned_cols=92  Identities=17%  Similarity=0.182  Sum_probs=71.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ++++++|+|+|.|...+.+|=. +.   .+|+.+|.++.-+...++.+...++.  .+++++.+++.+-..++||+|+|.
T Consensus        43 ~~~~VLDiGcG~G~~~~~la~~-~~---~~v~giD~s~~~l~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~fD~V~~~  118 (219)
T 3dlc_A           43 TAGTCIDIGSGPGALSIALAKQ-SD---FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSR  118 (219)
T ss_dssp             CEEEEEEETCTTSHHHHHHHHH-SE---EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHH-CC---CEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEEEC
T ss_conf             9993999627585999999953-69---9899997978999999874442166664000136533567544555299984


Q ss_pred             CC----CCHHHHHHHHHHHHCC
Q ss_conf             47----9989999984885206
Q gi|254780807|r  149 AL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~----a~l~~ll~~~~pllk~  166 (168)
                      .+    ..+..+++-+.+.||+
T Consensus       119 ~~l~h~~d~~~~l~~~~r~Lkp  140 (219)
T 3dlc_A          119 GSVFFWEDVATAFREIYRILKS  140 (219)
T ss_dssp             SCGGGCSCHHHHHHHHHHHEEE
T ss_pred             CHHHHCCCHHHHHHHHHHHCCC
T ss_conf             4167458999999999998580


No 22 
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.32  E-value=1.7e-06  Score=57.07  Aligned_cols=101  Identities=13%  Similarity=0.144  Sum_probs=70.3

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC---EEEECHH
Q ss_conf             9864635643100123443111114677335656522755466347875000038999999999738980---9980426
Q gi|254780807|r   56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG---KVFACRI  132 (168)
Q Consensus        56 ~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~---~vi~~r~  132 (168)
                      .+.+++.+.    ...+++++|+|+|.|..++.+|=..     ..++.+|-+..-+...++-++..++++   +++++.+
T Consensus        41 t~~Ll~~l~----~~~~~~vLDiGcG~G~~~~~la~~~-----~~v~~iDis~~~i~~a~~n~~~~~l~~~~i~~~~~D~  111 (194)
T 1dus_A           41 TKILVENVV----VDKDDDILDLGCGYGVIGIALADEV-----KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL  111 (194)
T ss_dssp             HHHHHHHCC----CCTTCEEEEETCTTSHHHHHHGGGS-----SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST
T ss_pred             HHHHHHHCC----CCCCCEEEEECCCCCHHHHHHHHHC-----CEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCH
T ss_conf             999998289----8899949995696429999999738-----8479982636788999999998199986199998736


Q ss_pred             HHHHHCCCCCCEEEECCC-----CCHHHHHHHHHHHHCC
Q ss_conf             653312479869999147-----9989999984885206
Q gi|254780807|r  133 QEAPQMITTCDVISARAL-----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       133 e~~~~~~~~~d~v~sRA~-----a~l~~ll~~~~pllk~  166 (168)
                      .+... ..+||+|++-..     ..+..+++-+...||+
T Consensus       112 ~~~~~-~~~fD~Ii~~~~~~~~~~~~~~~l~~~~~~Lkp  149 (194)
T 1dus_A          112 YENVK-DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKD  149 (194)
T ss_dssp             TTTCT-TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEE
T ss_pred             HHHCC-CCCCCEEEECCCHHCCCHHHHHHHHHHHHHCCC
T ss_conf             76335-677439999952211615679999999996096


No 23 
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.32  E-value=1.9e-06  Score=56.86  Aligned_cols=95  Identities=19%  Similarity=0.099  Sum_probs=74.0

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CEEEECHHHHHHHCCCCCCEEE
Q ss_conf             123443111114677335656522-75546634787500003899999999973898-0998042665331247986999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      ++.+.+|+|+|+|.|.-...+|=. .|+   ..|+.+|.+...+...++-+.+.++. +..+.+.+++++-..+.||+|+
T Consensus        35 l~~g~~VLDiGcG~G~~~~~la~~~~~~---~~v~giD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~  111 (219)
T 3dh0_A           35 LKEGMTVLDVGTGAGFYLPYLSKMVGEK---GKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIF  111 (219)
T ss_dssp             CCTTCEEEESSCTTCTTHHHHHHHHTTT---CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCCC---EEEEEEEEHHHHHHHHHHHHHHHHCCEEHHHHHHHHCCCCCCCCEEEHH
T ss_conf             8993999998788887799999750898---3999985003778899997676402210010003332775555421357


Q ss_pred             ECCC----CCHHHHHHHHHHHHCC
Q ss_conf             9147----9989999984885206
Q gi|254780807|r  147 ARAL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       147 sRA~----a~l~~ll~~~~pllk~  166 (168)
                      +..+    ......++-..+.||+
T Consensus       112 ~~~~l~~~~d~~~~l~ei~rvLkp  135 (219)
T 3dh0_A          112 MAFTFHELSEPLKFLEELKRVAKP  135 (219)
T ss_dssp             EESCGGGCSSHHHHHHHHHHHEEE
T ss_pred             HCCHHHHCCCHHHHHHHHHHHCCC
T ss_conf             314042077999999999998683


No 24 
>1vl5_A Unknown conserved protein BH2331; 10174951, hypothetical protein, structural genomics, JCSG, protein structure initiative, PSI; HET: MSE; 1.95A {Bacillus halodurans c-125} SCOP: c.66.1.41
Probab=98.31  E-value=2.7e-06  Score=55.92  Aligned_cols=92  Identities=10%  Similarity=0.094  Sum_probs=71.8

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             2344311111467733565652275546634787500003899999999973898-099804266533124798699991
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      +.+.+|+|||+|.|.....++=.     ...|+.+|.++.-+...++-....++. .+++++.+++++-..++||.|+++
T Consensus        36 ~~~~~VLDiGcG~G~~~~~la~~-----~~~v~g~D~s~~~~~~a~~~~~~~g~~~i~~~~~d~~~l~~~~~sfD~V~~~  110 (260)
T 1vl5_A           36 KGNEEVLDVATGGGHVANAFAPF-----VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCR  110 (260)
T ss_dssp             CSCCEEEEETCTTCHHHHHHGGG-----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHH-----CCEEEEEECCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE
T ss_conf             99299999546471999999972-----9969999899999998661222245665247751123578777855799870


Q ss_pred             CC----CCHHHHHHHHHHHHCC
Q ss_conf             47----9989999984885206
Q gi|254780807|r  149 AL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~----a~l~~ll~~~~pllk~  166 (168)
                      .+    ..+..++.-....||+
T Consensus       111 ~~l~h~~d~~~~l~~~~r~LkP  132 (260)
T 1vl5_A          111 IAAHHFPNPASFVSEAYRVLKK  132 (260)
T ss_dssp             SCGGGCSCHHHHHHHHHHHEEE
T ss_pred             CCHHHCCCHHHHHHHHHHHCCC
T ss_conf             2255268999999999974285


No 25 
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.90A {Geobacter sulfurreducens pca}
Probab=98.30  E-value=3.4e-06  Score=55.37  Aligned_cols=95  Identities=13%  Similarity=0.062  Sum_probs=77.3

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             2344311111467733565652275546634787500003899999999973898--09980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      .++++|++||||.|+=.+-+|-..|+  .++++.+|.++..+...++..++.++.  ++++++.+.+......+||+|+.
T Consensus        55 ~~~~~ILEiGtg~G~st~~la~~~~~--~g~v~~id~~~~~~~~ar~~~~~~g~~~~i~~~~gda~~~~~~~~~fDlifi  132 (210)
T 3c3p_A           55 KQPQLVVVPGDGLGCASWWFARAISI--SSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFM  132 (210)
T ss_dssp             HCCSEEEEESCGGGHHHHHHHTTSCT--TCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEE
T ss_pred             HCCCEEEEEECCCHHHHHHHHHHCCC--CEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCEEEE
T ss_conf             68098999508143999999997556--8199999775103789998798729873267861345430223688678998


Q ss_pred             CCC-CCHHHHHHHHHHHHCC
Q ss_conf             147-9989999984885206
Q gi|254780807|r  148 RAL-ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA~-a~l~~ll~~~~pllk~  166 (168)
                      -|- ......++.+.++|++
T Consensus       133 D~~~~~~~~~~~~~~~~L~p  152 (210)
T 3c3p_A          133 DCDVFNGADVLERMNRCLAK  152 (210)
T ss_dssp             ETTTSCHHHHHHHHGGGEEE
T ss_pred             CCCHHHHHHHHHHHHHHCCC
T ss_conf             57566679999998604487


No 26 
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 1f3l_A*
Probab=98.27  E-value=7.1e-06  Score=53.51  Aligned_cols=91  Identities=15%  Similarity=0.177  Sum_probs=64.5

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             34431111146773356565227554663478750000389999999997389--8099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      +++.|+|||+|.|+-++.+|-.    ...+|+.+|.++. .....+.+++.++  ++++++++++++.....+||+|+|-
T Consensus        64 ~~k~VLDlGcGtG~ls~~aA~~----Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~d~~~l~~~~~~~D~ivse  138 (340)
T 2fyt_A           64 KDKVVLDVGCGTGILSMFAAKA----GAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISE  138 (340)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHT----TCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEEC
T ss_pred             CCCEEEEECCCCCHHHHHHHHC----CCCEEEEEECCHH-HHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCCCCEEEEE
T ss_conf             9698999327747999999975----9988999809899-9999999997454775168981488764764667689996


Q ss_pred             CCCC-------HHHHHHHHHHHHCC
Q ss_conf             4799-------89999984885206
Q gi|254780807|r  149 ALAD-------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a~-------l~~ll~~~~pllk~  166 (168)
                      -+..       +..++.....+||+
T Consensus       139 ~~~~~~~~e~~~~~l~~~~~r~Lkp  163 (340)
T 2fyt_A          139 WMGYFLLFESMLDSVLYAKNKYLAK  163 (340)
T ss_dssp             CCBTTBTTTCHHHHHHHHHHHHEEE
T ss_pred             CCCEECCCHHHHHHHHHHHHHCCCC
T ss_conf             3210045547789999999724699


No 27 
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.26  E-value=6.3e-06  Score=53.79  Aligned_cols=92  Identities=16%  Similarity=0.106  Sum_probs=72.5

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CC-EEEECHHHHHHHCCCCCCEEEE
Q ss_conf             234431111146773356565227554663478750000389999999997389-80-9980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG-KVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~-~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      ..+.+++|+|+|.|.=++.  ++.+   ..+|+.+|.+...+...++.++++++ ++ +++++.+.+.......||.|++
T Consensus        32 ~~g~~VLDiGcG~G~~s~~--la~~---~~~V~avD~~~~~~~~a~~~~~~~gl~~~v~~~~gd~~~~~~~~~~~D~v~~  106 (192)
T 1l3i_A           32 GKNDVAVDVGCGTGGVTLE--LAGR---VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVV  106 (192)
T ss_dssp             CTTCEEEEESCTTSHHHHH--HHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEE
T ss_pred             CCCCEEEEEECCHHHHHHH--HHHC---CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCCCEEEE
T ss_conf             9979999983870499999--9843---9999999906288999999999809998889998862105300088688999


Q ss_pred             CC-CCCHHHHHHHHHHHHCC
Q ss_conf             14-79989999984885206
Q gi|254780807|r  148 RA-LADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA-~a~l~~ll~~~~pllk~  166 (168)
                      -. ...+..+++.+...||+
T Consensus       107 ~~~~~~~~~~l~~~~~~Lkp  126 (192)
T 1l3i_A          107 GGSGGELQEILRIIKDKLKP  126 (192)
T ss_dssp             SCCTTCHHHHHHHHHHTEEE
T ss_pred             ECCHHHHHHHHHHHHHHCCC
T ss_conf             18034699999999996799


No 28 
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.25  E-value=1.5e-06  Score=57.43  Aligned_cols=91  Identities=15%  Similarity=0.099  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHHCCC-CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECH
Q ss_conf             8986463564310012-3443111114677335656522755466347875000038999999999738980--998042
Q gi|254780807|r   55 WIRHVEDSLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACR  131 (168)
Q Consensus        55 ~~rHi~DSl~~~~~~~-~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r  131 (168)
                      |..+|.|-|......+ ...+++|+|||+|.=++.||-.+|+++   ++.+|-+..-+..-++-++..+++.  .+++..
T Consensus        48 y~~~i~dlL~~~~~~~~~~~~~lDiGtGsg~I~~~L~~~~~~~~---~~~~Di~~~al~~A~~N~~~n~l~~~i~~~~~~  124 (254)
T 2h00_A           48 YIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWY---FLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP  124 (254)
T ss_dssp             HHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCE---EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred             HHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCE---EEEEECCHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf             99999999705466667775489956787899999999779975---999989999999999999983876522456523


Q ss_pred             HHH-H-----HHCCCCCCEEEEC
Q ss_conf             665-3-----3124798699991
Q gi|254780807|r  132 IQE-A-----PQMITTCDVISAR  148 (168)
Q Consensus       132 ~e~-~-----~~~~~~~d~v~sR  148 (168)
                      ... +     .....+||+|+|=
T Consensus       125 ~~~~i~~~~~~~~~~~fD~iv~N  147 (254)
T 2h00_A          125 QKTLLMDALKEESEIIYDFCMCN  147 (254)
T ss_dssp             TTCSSTTTSTTCCSCCBSEEEEC
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             27767666666436765499936


No 29 
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.24  E-value=5.8e-06  Score=54.02  Aligned_cols=97  Identities=12%  Similarity=-0.026  Sum_probs=68.2

Q ss_pred             HHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCC
Q ss_conf             310012344311111467733565652275546634787500003899999999973898--099804266533124798
Q gi|254780807|r   65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTC  142 (168)
Q Consensus        65 ~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~  142 (168)
                      ++.+++.+.+++|||||.|+=++.++-..+.   .+|+.+|-++.-+.-.++-+++.++.  .+++.+...+.......+
T Consensus        15 ia~~v~~g~~vlDiGcg~G~l~~~l~~~~~~---~~V~avDi~~~~l~~A~~n~~~~gl~~~I~~~~~D~~~~~~~~~~~   91 (244)
T 3gnl_A           15 VASYITKNERIADIGSDHAYLPCFAVKNQTA---SFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAI   91 (244)
T ss_dssp             HHTTCCSSEEEEEETCSTTHHHHHHHHTTSE---EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCC
T ss_pred             HHHHCCCCCEEEEECCCHHHHHHHHHHCCCC---CEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCC
T ss_conf             9965899998999718648999999980999---8899963889999999999998299986799988750432155787


Q ss_pred             CEEEECCCCCHHH---HHHHHHHHHC
Q ss_conf             6999914799899---9998488520
Q gi|254780807|r  143 DVISARALADLDT---LLEYSFPWLY  165 (168)
Q Consensus       143 d~v~sRA~a~l~~---ll~~~~pllk  165 (168)
                      |.++.-.. ....   +++-..+.|+
T Consensus        92 d~~viag~-g~~~i~~il~~~~~~l~  116 (244)
T 3gnl_A           92 DTIVIAGM-GGTLIRTILEEGAAKLA  116 (244)
T ss_dssp             CEEEEEEE-CHHHHHHHHHHTGGGGT
T ss_pred             CEEEECCC-CHHHHHHHHHHHHHHHC
T ss_conf             68998488-88999999999899707


No 30 
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein, transferase; HET: TNA MTA; 1.66A {Methanothermobacterthermautotrophicus} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A*
Probab=98.24  E-value=8.7e-06  Score=52.99  Aligned_cols=91  Identities=18%  Similarity=0.165  Sum_probs=68.7

Q ss_pred             CCCCCCEEECCCCC-HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEE-
Q ss_conf             23443111114677-335656522755466347875000038999999999738980-998042665331247986999-
Q gi|254780807|r   70 PYPSIWIDLGSGGG-FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS-  146 (168)
Q Consensus        70 ~~~~~ilDiGSGaG-fPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~-  146 (168)
                      +.+.+|+|||||.| +..+.+| -+|.   .+|+.||.+...+..-++.++.+++++ +++++.+...+.  .+||+|+ 
T Consensus       121 ~~g~rVLdiGcG~g~~t~~~~a-~~~g---~~V~gIDisp~~~~~Ar~~~~~~g~~~v~~~~gD~~~l~~--~~fDvV~v  194 (298)
T 3fpf_A          121 RRGERAVFIGGGPLPLTGILLS-HVYG---MRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDG--LEFDVLMV  194 (298)
T ss_dssp             CTTCEEEEECCCSSCHHHHHHH-HTTC---CEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGG--CCCSEEEE
T ss_pred             CCCCEEEEEECCCHHHHHHHHH-HCCC---CEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC--CCCCEEEE
T ss_conf             9999899960685699999998-5689---9899996999999999997986499508999735544789--99898998


Q ss_pred             ECCCCCHHHHHHHHHHHHCC
Q ss_conf             91479989999984885206
Q gi|254780807|r  147 ARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       147 sRA~a~l~~ll~~~~pllk~  166 (168)
                      +..+.+...+++-..+.+++
T Consensus       195 a~~v~~~~~vl~~l~r~Lkp  214 (298)
T 3fpf_A          195 AALAEPKRRVFRNIHRYVDT  214 (298)
T ss_dssp             CTTCSCHHHHHHHHHHHCCT
T ss_pred             CCCCCCHHHHHHHHHHHCCC
T ss_conf             98773799999999986698


No 31 
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.23  E-value=2.4e-06  Score=56.28  Aligned_cols=73  Identities=18%  Similarity=0.282  Sum_probs=62.2

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ..++++|+|+|+|.-++.++-..|+.+   |+++|.+..-+...+.-....++++.++.+..-+  ....+||.|++-
T Consensus       196 ~~~~VLDlGcG~G~l~~~la~~~p~~~---v~~vD~s~~al~~ar~n~~~n~l~~~~~~~d~~~--~~~~~fD~Iv~N  268 (343)
T 2pjd_A          196 TKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAANGVEGEVFASNVFS--EVKGRFDMIISN  268 (343)
T ss_dssp             CCSBCCBTTCTTSHHHHHHHHHCTTCB---CEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT--TCCSCEEEEEEC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCCCCE---EEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHH--CCCCCCCEEEEC
T ss_conf             898299932527799999999789978---9999899999999999999849937999644012--266554589988


No 32 
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175, PSI-2; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.22  E-value=2.6e-06  Score=56.05  Aligned_cols=114  Identities=17%  Similarity=0.199  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHHHHHHHCCC--CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHH---HCC--
Q ss_conf             99998986463564310012--34431111146773356565227554663478750000389999999997---389--
Q gi|254780807|r   51 VEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK---TAA--  123 (168)
Q Consensus        51 ~~~~~~rHi~DSl~~~~~~~--~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~---L~L--  123 (168)
                      -+..|-|-=+|++.+..+++  .+.+++|+|||.|.-++.+|--.|..   .|+.+|..+.-+...++-++.   .++  
T Consensus        14 ~~~~~yR~~~DavLLAa~~~~~~~~rVLDlG~G~G~i~l~La~r~~~~---~v~gvEi~~~~~~lAr~N~~ln~~~~~~~   90 (260)
T 2ozv_A           14 RENLYFQGHMDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLEKA---EVTLYERSQEMAEFARRSLELPDNAAFSA   90 (260)
T ss_dssp             ---------CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTE---EEEEEESSHHHHHHHHHHTTSGGGTTTGG
T ss_pred             CCCCEECCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             876778775279999723688898999995436769999999858998---89999899999999999999865443323


Q ss_pred             CCEEEECHHHH-----HHH--CCCCCCEEEEC----------------------CCCCHHHHHHHHHHHHCCC
Q ss_conf             80998042665-----331--24798699991----------------------4799899999848852067
Q gi|254780807|r  124 RGKVFACRIQE-----APQ--MITTCDVISAR----------------------ALADLDTLLEYSFPWLYQK  167 (168)
Q Consensus       124 ~~~vi~~r~e~-----~~~--~~~~~d~v~sR----------------------A~a~l~~ll~~~~pllk~k  167 (168)
                      +.+++++.+..     ...  ..++||+|++-                      ....+..+++.+..+||++
T Consensus        91 ri~~~~~Di~~~~~~~~~~~~~~~~fD~VvsNPPY~~~~~~~~~~~~~~~a~~~~~~~l~~~i~~a~~lLkpg  163 (260)
T 2ozv_A           91 RIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSG  163 (260)
T ss_dssp             GEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEE
T ss_pred             CCEEEECHHHCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC
T ss_conf             5358963321322123443313676267986698446665668776778877504688999999999972889


No 33 
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.21  E-value=8.5e-06  Score=53.06  Aligned_cols=78  Identities=9%  Similarity=0.134  Sum_probs=60.6

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHH-HH-HCCCCCCEEEE
Q ss_conf             3443111114677335656522755466347875000038999999999738980-998042665-33-12479869999
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-AP-QMITTCDVISA  147 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~-~~-~~~~~~d~v~s  147 (168)
                      .+.+|+|+|+|.|- ++.++...+..   .|+.+|.++..+.+.++.++++|+++ +++++.+.+ ++ ...++||+|++
T Consensus       172 ~g~~vldlg~g~g~-~l~~~l~~~~~---~V~~vDi~~~~l~~a~~~a~~~g~~~i~~~~~d~~~~~~~~~~~~fD~v~~  247 (373)
T 2qm3_A          172 ENKDIFVLGDDDLT-SIALMLSGLPK---RIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFIT  247 (373)
T ss_dssp             TTCEEEEESCTTCH-HHHHHHHTCCS---EEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred             CCCEEEEEECCCHH-HHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCEEEE
T ss_conf             89979999799249-99999976999---899997979999999999998199743998530866324540788898998


Q ss_pred             CCCCC
Q ss_conf             14799
Q gi|254780807|r  148 RALAD  152 (168)
Q Consensus       148 RA~a~  152 (168)
                      -.--.
T Consensus       248 dpp~~  252 (373)
T 2qm3_A          248 DPPET  252 (373)
T ss_dssp             CCCSS
T ss_pred             CCCCC
T ss_conf             99986


No 34 
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus}
Probab=98.21  E-value=8e-06  Score=53.20  Aligned_cols=80  Identities=9%  Similarity=-0.015  Sum_probs=63.4

Q ss_pred             HHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHH-CCCCC
Q ss_conf             3100123443111114677335656522755466347875000038999999999738980-998042665331-24798
Q gi|254780807|r   65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ-MITTC  142 (168)
Q Consensus        65 ~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~-~~~~~  142 (168)
                      +.++++++..|+|+|+|.|.-++.||  .|.   .+|+.+|-++..+...++-+++.++++ +++++..+++.. ....+
T Consensus        16 l~~~l~~~~~VLD~gcG~G~~t~~LA--~~~---~~V~aiDis~~al~~a~~n~~~~~l~nv~~~~~~~~~l~~~~~~~~   90 (185)
T 3mti_A           16 LAEVLDDESIVVDATMGNGNDTAFLA--GLS---KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPI   90 (185)
T ss_dssp             HHTTCCTTCEEEESCCTTSHHHHHHH--TTS---SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCE
T ss_pred             HHHHCCCCCEEEEEEEECCHHHHHHH--HCC---CEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCC
T ss_conf             99658999999999638889999998--269---9899758987888789999998299848999936777555135666


Q ss_pred             CEEEECC
Q ss_conf             6999914
Q gi|254780807|r  143 DVISARA  149 (168)
Q Consensus       143 d~v~sRA  149 (168)
                      |.++...
T Consensus        91 ~~v~~~~   97 (185)
T 3mti_A           91 RAAIFNL   97 (185)
T ss_dssp             EEEEEEE
T ss_pred             CEEEEEC
T ss_conf             5699952


No 35 
>3dmg_A Probable ribosomal RNA small subunit methyltransferase; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.19  E-value=1.4e-05  Score=51.83  Aligned_cols=106  Identities=14%  Similarity=0.044  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHH--HCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHH
Q ss_conf             98646356431--0012344311111467733565652275546634787500003899999999973898099804266
Q gi|254780807|r   56 IRHVEDSLRVF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ  133 (168)
Q Consensus        56 ~rHi~DSl~~~--~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e  133 (168)
                      .+..++.+.-.  .....+++|+|+|+|.|.-++.++-..     ..++.+|.+..-+...++.....++++.++.....
T Consensus       216 s~~ll~~l~~~~~~~~~~g~~VLDlGcG~G~~~~~la~~~-----~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~  290 (381)
T 3dmg_A          216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG-----AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVD  290 (381)
T ss_dssp             HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTT-----CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTT
T ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHCC-----CEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             9999998787526668999989999601048889767519-----88741469999999999999982997388530100


Q ss_pred             HHHHCCCCCCEEEECCCC---------CHHHHHHHHHHHHCC
Q ss_conf             533124798699991479---------989999984885206
Q gi|254780807|r  134 EAPQMITTCDVISARALA---------DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       134 ~~~~~~~~~d~v~sRA~a---------~l~~ll~~~~pllk~  166 (168)
                      +......+||+|++-..-         ....+++-+...||+
T Consensus       291 ~~~~~~~~fD~Iv~n~~~h~~~~~~~~~~~~~l~~~~~~Lkp  332 (381)
T 3dmg_A          291 EALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRP  332 (381)
T ss_dssp             TTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEE
T ss_pred             CCCCCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             144667986899989324533436889999999999987584


No 36 
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.19  E-value=4.5e-06  Score=54.66  Aligned_cols=81  Identities=16%  Similarity=0.142  Sum_probs=64.2

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEE
Q ss_conf             123443111114677335656522755466347875000038999999999738980-9980426653312479869999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      ++.+.+++|||||.|.-...+|-....  ...|+.+|.....+...++..++++++| +++++.+.+......+||.|++
T Consensus        73 l~~g~~VLeIGtGtGy~aa~la~~~~~--~~~V~~iE~~~~l~~~A~~~l~~~g~~nv~~~~gD~~~g~~~~~~fD~Iiv  150 (317)
T 1dl5_A           73 LDKGMRVLEIGGGTGYNAAVMSRVVGE--KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFV  150 (317)
T ss_dssp             CCTTCEEEEECCTTSHHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCEEEE
T ss_conf             999998999179764768999886188--867999957817899999989973578739998955758877899419999


Q ss_pred             CCCC
Q ss_conf             1479
Q gi|254780807|r  148 RALA  151 (168)
Q Consensus       148 RA~a  151 (168)
                      -|..
T Consensus       151 ~~~~  154 (317)
T 1dl5_A          151 TVGV  154 (317)
T ss_dssp             CSBB
T ss_pred             CCCH
T ss_conf             6876


No 37 
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.19  E-value=7.9e-06  Score=53.25  Aligned_cols=99  Identities=15%  Similarity=-0.005  Sum_probs=69.7

Q ss_pred             HHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCC
Q ss_conf             4310012344311111467733565652275546634787500003899999999973898--09980426653312479
Q gi|254780807|r   64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITT  141 (168)
Q Consensus        64 ~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~  141 (168)
                      .++.+++.+.+++|||||.|.=++.++--.|.   .+|+.+|-++.-....++-+++.++.  ++++++.+.+.......
T Consensus         8 ~i~~~v~~g~~ilDiG~g~G~~~~~l~~~~~~---~~v~avDi~~~~l~~a~~n~~~~~l~~~i~~~~~D~~~~~~~~~~   84 (225)
T 3kr9_A            8 LVASFVSQGAILLDVGSDHAYLPIELVERGQI---KSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQ   84 (225)
T ss_dssp             HHHTTSCTTEEEEEETCSTTHHHHHHHHTTSE---EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGC
T ss_pred             HHHHHCCCCCEEEEECCCHHHHHHHHHHCCCC---CEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCC
T ss_conf             99955899898999618569999999980999---889971099999999999999829998779998874132203466


Q ss_pred             CCEEEECCCCCH--HHHHHHHHHHHC
Q ss_conf             869999147998--999998488520
Q gi|254780807|r  142 CDVISARALADL--DTLLEYSFPWLY  165 (168)
Q Consensus       142 ~d~v~sRA~a~l--~~ll~~~~pllk  165 (168)
                      ||.++...++..  ..+++-....++
T Consensus        85 ~d~iviag~g~~~i~~il~~~~~~l~  110 (225)
T 3kr9_A           85 VSVITIAGMGGRLIARILEEGLGKLA  110 (225)
T ss_dssp             CCEEEEEEECHHHHHHHHHHTGGGCT
T ss_pred             CCHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf             77210538778999999998899718


No 38 
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.18  E-value=1.6e-05  Score=51.46  Aligned_cols=94  Identities=14%  Similarity=0.008  Sum_probs=70.7

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-C-EEEECHHHHHHHCCCCCCEEE
Q ss_conf             12344311111467733565652275546634787500003899999999973898-0-998042665331247986999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G-KVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~-~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      ++.+.+|+|+|+|.|...+.++-..    +.+|+.+|.++.-+...+......+.. + ......+++++...++||+|+
T Consensus        59 l~~g~~VLDiGcG~G~~~~~~~~~~----~~~v~gvD~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~fD~v~  134 (273)
T 3bus_A           59 VRSGDRVLDVGCGIGKPAVRLATAR----DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVW  134 (273)
T ss_dssp             CCTTCEEEEESCTTSHHHHHHHHHS----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHC----CCEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEE
T ss_conf             8997989997897998899999845----988999978488899999999871777321001344346887777624898


Q ss_pred             ECCC----CCHHHHHHHHHHHHCC
Q ss_conf             9147----9989999984885206
Q gi|254780807|r  147 ARAL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       147 sRA~----a~l~~ll~~~~pllk~  166 (168)
                      |.-+    .....++.-....||+
T Consensus       135 ~~~~l~h~~d~~~~l~~~~r~Lkp  158 (273)
T 3bus_A          135 ALESLHHMPDRGRALREMARVLRP  158 (273)
T ss_dssp             EESCTTTSSCHHHHHHHHHTTEEE
T ss_pred             ECCCEEECCCHHHHHHHHHHHCCC
T ss_conf             646265066499999999986599


No 39 
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.18  E-value=6.8e-06  Score=53.61  Aligned_cols=90  Identities=18%  Similarity=0.176  Sum_probs=68.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECCC
Q ss_conf             34431111146773356565227554663478750000389999999997389809980426653312479869999147
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL  150 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA~  150 (168)
                      ++++|+|+|+|.|.-.+.||=  +   +..|+.+|.+..-+...++.....+++..+....+++.+ ..++||+|+|..+
T Consensus       120 ~~~~vLDiGcG~G~~~~~la~--~---g~~v~gvD~s~~~i~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~fD~I~~~~~  193 (286)
T 3m70_A          120 SPCKVLDLGCGQGRNSLYLSL--L---GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAAN-IQENYDFIVSTVV  193 (286)
T ss_dssp             CSCEEEEESCTTCHHHHHHHH--T---TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCC-CCSCEEEEEECSS
T ss_pred             CCCEEEEECCCCCHHHHHHHH--C---CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECHHHHHC-CCCCCCEEEEEEE
T ss_conf             969799983779899999985--8---997999989889999999865422662024440022110-1356757878607


Q ss_pred             CC------HHHHHHHHHHHHCC
Q ss_conf             99------89999984885206
Q gi|254780807|r  151 AD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       151 a~------l~~ll~~~~pllk~  166 (168)
                      -.      ...+++-....|++
T Consensus       194 l~~l~~~~~~~~l~~~~~~Lkp  215 (286)
T 3m70_A          194 FMFLNRERVPSIIKNMKEHTNV  215 (286)
T ss_dssp             GGGSCGGGHHHHHHHHHHTEEE
T ss_pred             EECCCHHHHHHHHHHHHHHCCC
T ss_conf             7638878999999999997298


No 40 
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron}
Probab=98.17  E-value=7.3e-06  Score=53.44  Aligned_cols=97  Identities=12%  Similarity=0.064  Sum_probs=72.5

Q ss_pred             HHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCC
Q ss_conf             10012344311111467733565652275546634787500003899999999973898--0998042665331247986
Q gi|254780807|r   66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCD  143 (168)
Q Consensus        66 ~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d  143 (168)
                      +.-.+.+.+|+|+|+|.|--.+.||=..    +.+|+.||.++.-+...++-..+.++.  ++++.+.+++++-...+||
T Consensus        41 l~~l~~~~rVLDlGCG~G~~~~~La~~~----~~~v~gvD~S~~ml~~a~~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD  116 (257)
T 3f4k_A           41 INELTDDAKIADIGCGTGGQTLFLADYV----KGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELD  116 (257)
T ss_dssp             SCCCCTTCEEEEETCTTSHHHHHHHHHC----CSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred             CCCCCCCCEEEEECCCCCHHHHHHHHHC----CCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
T ss_conf             6079997979997177979999999866----997999968456778889877643210000111303887623688521


Q ss_pred             EEEECCCC---CHHHHHHHHHHHHCC
Q ss_conf             99991479---989999984885206
Q gi|254780807|r  144 VISARALA---DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       144 ~v~sRA~a---~l~~ll~~~~pllk~  166 (168)
                      +|+|..+.   +.+..+.-....||+
T Consensus       117 ~V~~~~~l~~~~~~~~l~e~~rvLkp  142 (257)
T 3f4k_A          117 LIWSEGAIYNIGFERGMNEWSKYLKK  142 (257)
T ss_dssp             EEEEESCSCCCCHHHHHHHHHTTEEE
T ss_pred             EEEEHHHHHHCCHHHHHHHHHHHCCC
T ss_conf             89860547728989999999997085


No 41 
>2yxd_A Probable cobalt-precorrin-6Y C(15)- methyltransferase [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii DSM2661}
Probab=98.16  E-value=2.1e-05  Score=50.83  Aligned_cols=88  Identities=10%  Similarity=0.118  Sum_probs=69.8

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEE
Q ss_conf             123443111114677335656522755466347875000038999999999738980-9980426653312479869999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      +..+..++|+|+|.|.-++.+|-.     ..+|+.+|.++..+.-.++-.++.+++| +++++.+++.-. ..+||.++.
T Consensus        33 l~~~~~VlDlg~G~G~~si~la~~-----~~~V~ave~~~~~i~~a~~n~~~~gv~nv~~i~g~a~~~l~-~~~~D~v~i  106 (183)
T 2yxd_A           33 LNKDDVVVDVGCGSGGMTVEIAKR-----CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLD-KLEFNKAFI  106 (183)
T ss_dssp             CCTTCEEEEESCCCSHHHHHHHTT-----SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGG-GCCCSEEEE
T ss_pred             CCCCCEEEEEECCCCHHHHHHHHH-----CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH-CCCCCEEEE
T ss_conf             989499999617476999998873-----89999997989999999999997689987999464565640-699894998


Q ss_pred             CCCCCHHHHHHHHHH
Q ss_conf             147998999998488
Q gi|254780807|r  148 RALADLDTLLEYSFP  162 (168)
Q Consensus       148 RA~a~l~~ll~~~~p  162 (168)
                      =+-.++..+++...+
T Consensus       107 g~~~~~~~~l~~~~~  121 (183)
T 2yxd_A          107 GGTKNIEKIIEILDK  121 (183)
T ss_dssp             CSCSCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCC
T ss_conf             998709999998542


No 42 
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.50A {Clostridium acetobutylicum atcc 824} SCOP: c.66.1.43
Probab=98.16  E-value=2e-05  Score=50.90  Aligned_cols=124  Identities=11%  Similarity=0.043  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEH
Q ss_conf             99999999999984632130430899999898646356431001234431111146773356565227554663478750
Q gi|254780807|r   26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE  105 (168)
Q Consensus        26 ~~~l~~y~~ll~~~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lve  105 (168)
                      .+.+..|++.+..++.        +. +-|...+.+.+.-  ....+.+|+|+|+|.|--.++||=.     +..++.+|
T Consensus         3 Y~~~a~~Yd~l~~~~~--------~y-~~~~~~~~~~~~~--~~~~~~~iLDlGCGtG~~~~~l~~~-----g~~v~gvD   66 (246)
T 1y8c_A            3 YNKFAHIYDKLIRADV--------DY-KKWSDFIIEKCVE--NNLVFDDYLDLACGTGNLTENLCPK-----FKNTWAVD   66 (246)
T ss_dssp             HHHHHHHHHHHTTCSC--------CH-HHHHHHHHHHHHT--TTCCTTEEEEETCTTSTTHHHHGGG-----SSEEEEEC
T ss_pred             HHHHHHHHHHHHCCCC--------CH-HHHHHHHHHHHHH--HCCCCCEEEEEECCCCHHHHHHHHC-----CCEEEEEE
T ss_conf             7789999999842899--------88-9999999999997--3899892999807462999999974-----99599996


Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEEC--CC---CCHHH---HHHHHHHHHCC
Q ss_conf             0003899999999973898099804266533124798699991--47---99899---99984885206
Q gi|254780807|r  106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR--AL---ADLDT---LLEYSFPWLYQ  166 (168)
Q Consensus       106 s~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sR--A~---a~l~~---ll~~~~pllk~  166 (168)
                      .++.-+...+.-....+++++++++.+.+++. .++||+|++=  ++   .+.+.   ++.-+...||+
T Consensus        67 ~S~~ml~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~~~~~l~~i~~~Lkp  134 (246)
T 1y8c_A           67 LSQEMLSEAENKFRSQGLKPRLACQDISNLNI-NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKE  134 (246)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEE
T ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHC-CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf             74999998763112234432223466777510-334122412102221368878999999999997499


No 43 
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer, dimer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.15  E-value=1.5e-05  Score=51.64  Aligned_cols=91  Identities=14%  Similarity=0.203  Sum_probs=67.0

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      +++.|+|||+|.|+-++..|=.    ....|+.+|.+. .+...++.+++.++.  ++++++++++++....+||+|+|-
T Consensus        38 ~~~~VLDiGcGtG~ls~~aa~~----Ga~~V~a~d~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~D~vvse  112 (328)
T 1g6q_1           38 KDKIVLDVGCGTGILSMFAAKH----GAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISE  112 (328)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHT----CCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEEC
T ss_pred             CCCEEEEECCCCCHHHHHHHHC----CCCEEEEEECHH-HHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCEEEEE
T ss_conf             9799999789977999999971----999899995979-99999999987387623899971210055776664299997


Q ss_pred             CC-------CCHHHHHHHHHHHHCC
Q ss_conf             47-------9989999984885206
Q gi|254780807|r  149 AL-------ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~-------a~l~~ll~~~~pllk~  166 (168)
                      -+       ..+..++....++|++
T Consensus       113 ~~~~~~~~e~~~~~~~~a~~~~Lkp  137 (328)
T 1g6q_1          113 WMGYFLLYESMMDTVLYARDHYLVE  137 (328)
T ss_dssp             CCBTTBSTTCCHHHHHHHHHHHEEE
T ss_pred             ECCEECCCCCHHHHHHHHHHHCCCC
T ss_conf             3320304652106789998713488


No 44 
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.15  E-value=1.6e-05  Score=51.50  Aligned_cols=95  Identities=12%  Similarity=0.210  Sum_probs=77.7

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC---CEEEECHHHH-HHHC-CCCCCE
Q ss_conf             2344311111467733565652275546634787500003899999999973898---0998042665-3312-479869
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR---GKVFACRIQE-APQM-ITTCDV  144 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~---~~vi~~r~e~-~~~~-~~~~d~  144 (168)
                      ..+.+++++|||+|.=++-+|-..|.  .++++-||.....+...++..++.|+.   ++++.+++.+ ++.. .++||+
T Consensus        55 ~~~~~vlEiGt~~G~stl~la~al~~--~g~l~tIE~~~e~~~~Ar~~~~~ag~~~~rv~~i~gda~e~L~~l~~~~fDl  132 (221)
T 3dr5_A           55 NGSTGAIAITPAAGLVGLYILNGLAD--NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQL  132 (221)
T ss_dssp             TTCCEEEEESTTHHHHHHHHHHHSCT--TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHCCC--CCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCE
T ss_conf             38998999728057999999984799--9789999899999999999999668876246773277899878743478777


Q ss_pred             EEECCC-CCHHHHHHHHHHHHCC
Q ss_conf             999147-9989999984885206
Q gi|254780807|r  145 ISARAL-ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       145 v~sRA~-a~l~~ll~~~~pllk~  166 (168)
                      |+.-|- ......++.+.++|++
T Consensus       133 VfiD~~k~~y~~~~~~~~~lLkp  155 (221)
T 3dr5_A          133 VFGQVSPMDLKALVDAAWPLLRR  155 (221)
T ss_dssp             EEECCCTTTHHHHHHHHHHHEEE
T ss_pred             EEECCCHHHHHHHHHHHHHHCCC
T ss_conf             99758867718999998632558


No 45 
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, alternative splicing; 2.55A {Rattus norvegicus}
Probab=98.15  E-value=9.9e-06  Score=52.68  Aligned_cols=75  Identities=16%  Similarity=0.264  Sum_probs=58.4

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      .++.|+|||+|.|+-++-.|-+-    ..+|+.+|.+. -+...++.++..++.  ++++++++|++. ..+++|+|+|-
T Consensus       158 ~~kvVLDvGcGtGiLs~~AA~aG----A~kV~avE~S~-~a~~A~~~v~~Ngl~d~I~vi~g~~e~l~-lpe~vDvIVSE  231 (480)
T 3b3j_A          158 KDKIVLDVGCGSGILSFFAAQAG----ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LPEQVDIIISE  231 (480)
T ss_dssp             TTCEEEEESCSTTHHHHHHHHTT----CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSCEEEEECC
T ss_pred             CCCEEEEECCCCCHHHHHHHHCC----CCEEEEECCHH-HHHHHHHHHHHCCCCCCEEEEECCHHHCC-CCCCCCEEEEE
T ss_conf             98989996888369999999859----98899990959-99999999997499861689975276567-67666789998


Q ss_pred             CCC
Q ss_conf             479
Q gi|254780807|r  149 ALA  151 (168)
Q Consensus       149 A~a  151 (168)
                      -+.
T Consensus       232 ~mg  234 (480)
T 3b3j_A          232 PMG  234 (480)
T ss_dssp             CCH
T ss_pred             CCC
T ss_conf             322


No 46 
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.70A {Bacillus thuringiensis}
Probab=98.11  E-value=6.4e-06  Score=53.76  Aligned_cols=93  Identities=13%  Similarity=0.001  Sum_probs=65.9

Q ss_pred             HHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC-CCCEEEECHHHHHHHCCCCCCE
Q ss_conf             100123443111114677335656522755466347875000038999999999738-9809980426653312479869
Q gi|254780807|r   66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        66 ~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~-L~~~vi~~r~e~~~~~~~~~d~  144 (168)
                      ..+++++.+|+|+|+|.|.-...||=.     +..|+.+|.+..-+...+   ++.. .+.+.+++.+++++-..++||+
T Consensus        48 ~~~l~~~~~VLDiGcG~G~~~~~l~~~-----~~~v~giD~s~~~l~~a~---~~~~~~~~~~~~~~~~~l~~~~~~fD~  119 (242)
T 3l8d_A           48 EQYVKKEAEVLDVGCGDGYGTYKLSRT-----GYKAVGVDISEVMIQKGK---ERGEGPDLSFIKGDLSSLPFENEQFEA  119 (242)
T ss_dssp             HHHSCTTCEEEEETCTTSHHHHHHHHT-----TCEEEEEESCHHHHHHHH---TTTCBTTEEEEECBTTBCSSCTTCEEE
T ss_pred             HHHCCCCCEEEEECCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf             985899697999658885999999964-----998999979746679987---503444222223443567888785689


Q ss_pred             EEECCC----CCHHHHHHHHHHHHCC
Q ss_conf             999147----9989999984885206
Q gi|254780807|r  145 ISARAL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       145 v~sRA~----a~l~~ll~~~~pllk~  166 (168)
                      |+|+.+    .++..+++-....||+
T Consensus       120 i~~~~~l~hi~d~~~~l~~~~r~Lkp  145 (242)
T 3l8d_A          120 IMAINSLEWTEEPLRALNEIKRVLKS  145 (242)
T ss_dssp             EEEESCTTSSSCHHHHHHHHHHHEEE
T ss_pred             EEEECHHHHCCCHHHHHHHHHHHCCC
T ss_conf             85500288447999999999998584


No 47 
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransferase posttranslational modification; 1.59A {Thermus thermophilus HB8} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.10  E-value=1.1e-05  Score=52.46  Aligned_cols=78  Identities=17%  Similarity=0.176  Sum_probs=61.1

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             01234431111146773356565227554663478750000389999999997389809980426653312479869999
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      +...+.+++|+|+|.|.-++.++-.     +.+|+.+|-.+.-+...++-++..++++.++.+..++... .++||+|+|
T Consensus       117 ~~~~g~~VLDvGcGsGiLsi~aak~-----G~~V~aiDid~~av~~a~~N~~~N~v~~~~~~~~~~~~~~-~~~fDlIva  190 (254)
T 2nxc_A          117 HLRPGDKVLDLGTGSGVLAIAAEKL-----GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP-FGPFDLLVA  190 (254)
T ss_dssp             HCCTTCEEEEETCTTSHHHHHHHHT-----TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG-GCCEEEEEE
T ss_pred             HCCCCCEEEEECCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHCCC-CCCCCEEEE
T ss_conf             1799798999717778889999845-----9989999887278899999899709944999874345164-578668999


Q ss_pred             CCCC
Q ss_conf             1479
Q gi|254780807|r  148 RALA  151 (168)
Q Consensus       148 RA~a  151 (168)
                      -.++
T Consensus       191 Ni~~  194 (254)
T 2nxc_A          191 NLYA  194 (254)
T ss_dssp             ECCH
T ss_pred             EEEH
T ss_conf             8100


No 48 
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, NYSGXRC, structural genomics; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.10  E-value=4.9e-06  Score=54.45  Aligned_cols=77  Identities=14%  Similarity=0.086  Sum_probs=56.9

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEE
Q ss_conf             0123443111114677335656522755466347875000038999999999738980-998042665331247986999
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      ....+.+|+|+|+|.|.-++-+|-..+    ..|+.+|-+..-+...++-++..++.+ .........  ...++||+|+
T Consensus        57 ~~~~~~~VLDlGcGsG~~~~~~ak~g~----~~V~~iDis~~al~~A~~N~~~n~~~~~~~~~~~~~~--~~~~~fD~Iv  130 (205)
T 3grz_A           57 AMVKPLTVADVGTGSGILAIAAHKLGA----KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIV  130 (205)
T ss_dssp             HCSSCCEEEEETCTTSHHHHHHHHTTC----SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEE
T ss_pred             CCCCCCEEEEEECCHHHHHHHHHHCCC----CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHH--CCCCCCCEEE
T ss_conf             479959999995262299999987599----6899998989999999999997376676887343444--0455568999


Q ss_pred             ECCC
Q ss_conf             9147
Q gi|254780807|r  147 ARAL  150 (168)
Q Consensus       147 sRA~  150 (168)
                      |--+
T Consensus       131 ani~  134 (205)
T 3grz_A          131 ANIL  134 (205)
T ss_dssp             EESC
T ss_pred             ECCC
T ss_conf             8587


No 49 
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.07  E-value=3.5e-05  Score=49.51  Aligned_cols=96  Identities=9%  Similarity=0.041  Sum_probs=79.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHH-HH------CCC
Q ss_conf             2344311111467733565652275546634787500003899999999973898--09980426653-31------247
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEA-PQ------MIT  140 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~-~~------~~~  140 (168)
                      .++++++.|||+.|+=++-+|...|+  .+.++.+|.....+.+-+...++.++.  ++++.+++.+. ++      ...
T Consensus        78 ~~ak~iLEIGT~~GySal~~a~al~~--~g~l~tie~~~~~~~~Ar~~~~~ag~~~kI~~~~g~A~e~L~~l~~~~~~~~  155 (247)
T 1sui_A           78 INAKNTMEIGVYTGYSLLATALAIPE--DGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG  155 (247)
T ss_dssp             TTCCEEEEECCGGGHHHHHHHHHSCT--TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred             HCCCEEEEEECCCCHHHHHHHHHCCC--CCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCC
T ss_conf             49977999632158999999985854--6369998517787899999998620145058994428999999985313477


Q ss_pred             CCCEEEECC-CCCHHHHHHHHHHHHCCC
Q ss_conf             986999914-799899999848852067
Q gi|254780807|r  141 TCDVISARA-LADLDTLLEYSFPWLYQK  167 (168)
Q Consensus       141 ~~d~v~sRA-~a~l~~ll~~~~pllk~k  167 (168)
                      .||+|..-| -......++.+.++|++.
T Consensus       156 ~fDfIFIDadK~~Y~~y~e~~~~LLr~G  183 (247)
T 1sui_A          156 SYDFIFVDADKDNYLNYHKRLIDLVKVG  183 (247)
T ss_dssp             CBSEEEECSCSTTHHHHHHHHHHHBCTT
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHHCCCC
T ss_conf             6447996388888899999997344798


No 50 
>2i6g_A Putative methyltransferase; 16420133, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MLY; 1.90A {Salmonella typhimurium LT2} SCOP: c.66.1.44
Probab=98.07  E-value=2.6e-05  Score=50.28  Aligned_cols=109  Identities=13%  Similarity=0.112  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHH------HHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99998986463------564310012344311111467733565652275546634787500003899999999973898
Q gi|254780807|r   51 VEDFWIRHVED------SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR  124 (168)
Q Consensus        51 ~~~~~~rHi~D------Sl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~  124 (168)
                      .++.|.+|..-      .+.....+. +++++|||+|.|.=.+.+|=.     +..|+.+|.+..-+...+....+.+++
T Consensus         6 ~~~~~~~~y~~~~~~~~~~~~~~~l~-pgrVLDiGcG~G~~~~~la~~-----g~~v~gvD~s~~~l~~a~~~~~~~~~~   79 (199)
T 2i6g_A            6 DENYFTEXYGLTRTHSDVLAAAXVVA-PGRTLDLGCGNGRNSLYLAAN-----GYDVTAWDXNPASMANLERIXAAEGLD   79 (199)
T ss_dssp             SHHHHHHHHCBCCCCHHHHHHHTTSC-SCEEEEETCTTSHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHCCCC-CCCEEEECCCCCHHHHHHHHC-----CCEEEEEECCCHHHHHHHHHHHHCCCC
T ss_conf             77876652377853899999843789-896899858897899999854-----998999958718999999864213764


Q ss_pred             C-EEEECHHHHHHHCCCCCCEEEECCCCC------HHHHHHHHHHHHCC
Q ss_conf             0-998042665331247986999914799------89999984885206
Q gi|254780807|r  125 G-KVFACRIQEAPQMITTCDVISARALAD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       125 ~-~vi~~r~e~~~~~~~~~d~v~sRA~a~------l~~ll~~~~pllk~  166 (168)
                      + +......+..+. ..+||+|++..+-.      ...++.-....|++
T Consensus        80 ~~~~~~~d~~~~~~-~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~L~p  127 (199)
T 2i6g_A           80 NLQTDLVDLNTLTF-DGEYDFILSTVVMMFLEAQTIPGLIANMQRCTXP  127 (199)
T ss_dssp             TEEEEECCTTTCCC-CCCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEE
T ss_pred             CHHHHHEECCCCCC-CCCEEEEEECCCHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             10010000002466-8753199981214509988999999999998387


No 51 
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.06  E-value=1.1e-05  Score=52.46  Aligned_cols=78  Identities=18%  Similarity=0.157  Sum_probs=61.8

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             23443111114677335656522755466347875000038999999999738980-99804266533124798699991
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ..+.+++|||||.|+-..++|-+.    +..|+.+|..+.-+.+.++..+++++.| +++++.+.+......+||.|.+-
T Consensus        90 ~~g~~VLeIGsGtGy~ta~la~l~----g~~V~~IE~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~~fD~I~v~  165 (235)
T 1jg1_A           90 KPGMNILEVGTGSGWNAALISEIV----KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVT  165 (235)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH----CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHC----CCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEE
T ss_conf             999879994788767899999864----9739999628899999999999809971699988700166655763436761


Q ss_pred             CCC
Q ss_conf             479
Q gi|254780807|r  149 ALA  151 (168)
Q Consensus       149 A~a  151 (168)
                      |-.
T Consensus       166 ~a~  168 (235)
T 1jg1_A          166 AGA  168 (235)
T ss_dssp             SBB
T ss_pred             CCH
T ss_conf             465


No 52 
>2esr_A Methyltransferase; structural genomics, hypothetical protein, PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes MGAS10394} SCOP: c.66.1.46
Probab=98.06  E-value=1.1e-05  Score=52.34  Aligned_cols=74  Identities=16%  Similarity=0.136  Sum_probs=60.0

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHHH-HHCCCCCCEEEE
Q ss_conf             3443111114677335656522755466347875000038999999999738980--9980426653-312479869999
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEA-PQMITTCDVISA  147 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~~-~~~~~~~d~v~s  147 (168)
                      ++++|+|+|+|.|.-|+..+--    ...+|+.+|.+..-+..+++.+..+++++  +++++.+.++ .....+||+|++
T Consensus        31 ~g~~vLDl~~GsG~~~iea~~r----~a~~v~~ve~~~~a~~~~~~n~~~~~~~~~v~ii~~D~~~~l~~~~~~fDiI~~  106 (177)
T 2esr_A           31 NGGRVLDLFAGSGGLAIEAVSR----GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFL  106 (177)
T ss_dssp             CSCEEEEETCTTCHHHHHHHHT----TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEE
T ss_pred             CCCEEEECCEEHHHHHHHHHHC----CCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCEEEE
T ss_conf             9897999950379999999973----862016783428899988875765135551024531155554313467886887


Q ss_pred             C
Q ss_conf             1
Q gi|254780807|r  148 R  148 (168)
Q Consensus       148 R  148 (168)
                      =
T Consensus       107 D  107 (177)
T 2esr_A          107 D  107 (177)
T ss_dssp             C
T ss_pred             C
T ss_conf             9


No 53 
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.05  E-value=8.4e-06  Score=53.10  Aligned_cols=81  Identities=17%  Similarity=0.077  Sum_probs=64.1

Q ss_pred             HHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECH-HHHHHHCCCCCC
Q ss_conf             3100123443111114677335656522755466347875000038999999999738980998042-665331247986
Q gi|254780807|r   65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQEAPQMITTCD  143 (168)
Q Consensus        65 ~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r-~e~~~~~~~~~d  143 (168)
                      ++..++.+.+|+|+|+|.|.-.+.++=..|+.+   |+.+|-++.-+.+.++-....++.+.+.... ....+  ..+||
T Consensus        43 i~~~~~~~~~VLDiGCG~G~~~~~la~~~p~~~---v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~fD  117 (200)
T 3fzg_A           43 VFGNIKHVSSILDFGCGFNPLALYQWNENEKII---YHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVY--KGTYD  117 (200)
T ss_dssp             HHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCE---EEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHT--TSEEE
T ss_pred             HHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCE---EEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHCC--CCCCC
T ss_conf             995289998799958867877999998789978---9998599999999985102328851566510133344--78969


Q ss_pred             EEEECCC
Q ss_conf             9999147
Q gi|254780807|r  144 VISARAL  150 (168)
Q Consensus       144 ~v~sRA~  150 (168)
                      +|++..+
T Consensus       118 ~i~~~~~  124 (200)
T 3fzg_A          118 VVFLLKM  124 (200)
T ss_dssp             EEEEETC
T ss_pred             EEEECCC
T ss_conf             8987383


No 54 
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus HB8} PDB: 2yr0_A
Probab=97.99  E-value=3.2e-05  Score=49.75  Aligned_cols=91  Identities=13%  Similarity=0.139  Sum_probs=66.1

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECCC
Q ss_conf             34431111146773356565227554663478750000389999999997389809980426653312479869999147
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL  150 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA~  150 (168)
                      .+.+|+|+|+|.|.-...++  .+   +..|+.+|.+..-+...++-...++.+++++.+.+|+++-..+.||.|+|..+
T Consensus        39 ~~~~vLDiGcG~G~~t~~la--~~---~~~V~gvD~S~~~l~~a~~r~~~~~~~v~~~~~da~~l~~~~~sfD~V~~~~~  113 (263)
T 2yqz_A           39 EEPVFLELGVGTGRIALPLI--AR---GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL  113 (263)
T ss_dssp             SCCEEEEETCTTSTTHHHHH--TT---TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred             CCCEEEEECCCCCHHHHHHH--HC---CCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEEECCH
T ss_conf             99989995178869999999--66---99899998989999998740210114410222012223466761047875122


Q ss_pred             ----CCHHHHHHHHHHHHCC
Q ss_conf             ----9989999984885206
Q gi|254780807|r  151 ----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       151 ----a~l~~ll~~~~pllk~  166 (168)
                          ......++-....||+
T Consensus       114 l~~~~d~~~~l~e~~r~LkP  133 (263)
T 2yqz_A          114 WHLVPDWPKVLAEAIRVLKP  133 (263)
T ss_dssp             GGGCTTHHHHHHHHHHHEEE
T ss_pred             HHHCCCHHHHHHHHHHHCCC
T ss_conf             77558999999999998580


No 55 
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.99  E-value=2.6e-05  Score=50.23  Aligned_cols=89  Identities=17%  Similarity=0.109  Sum_probs=64.7

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHHHHHHCCCCCCEEEECC
Q ss_conf             34431111146773356565227554663478750000389999999997389-80998042665331247986999914
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA  149 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e~~~~~~~~~d~v~sRA  149 (168)
                      ++.+|+|||+|.|..+..++=..+    ..|+.+|-++.-+...+   ++..- +...++..+++++-..+.||+|+|..
T Consensus        44 ~g~~VLDiGcG~G~~~~~l~~~g~----~~v~giD~S~~~i~~a~---~~~~~~~~~~~~~d~~~l~~~~~~fD~V~~~~  116 (253)
T 3g5l_A           44 NQKTVLDLGCGFGWHCIYAAEHGA----KKVLGIDLSERMLTEAK---RKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSL  116 (253)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHTTC----SEEEEEESCHHHHHHHH---HHCCCTTEEEEECCGGGCCCCTTCEEEEEEES
T ss_pred             CCCEEEEECCCCCHHHHHHHHCCC----CEEEEEECCCHHHHHHH---HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             969899983778499999996499----98999948506568998---74034443222222245665675555342111


Q ss_pred             C----CCHHHHHHHHHHHHCC
Q ss_conf             7----9989999984885206
Q gi|254780807|r  150 L----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       150 ~----a~l~~ll~~~~pllk~  166 (168)
                      +    ..+..+++-....||+
T Consensus       117 ~l~~~~d~~~~l~~i~r~Lkp  137 (253)
T 3g5l_A          117 ALHYIASFDDICKKVYINLKS  137 (253)
T ss_dssp             CGGGCSCHHHHHHHHHHHEEE
T ss_pred             EEEECCCHHHHHHHHHHHCCC
T ss_conf             133148999999999997488


No 56 
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structural genomics; HET: SAH; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.66.1.32
Probab=97.98  E-value=3e-05  Score=49.86  Aligned_cols=102  Identities=16%  Similarity=0.048  Sum_probs=70.4

Q ss_pred             HCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH
Q ss_conf             46321304308999998986463564310012344311111467733565652275546634787500003899999999
Q gi|254780807|r   39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV  118 (168)
Q Consensus        39 ~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~  118 (168)
                      ++.+..|=-..|..++..+ ++--.....-+ .+.+++|+|+|.|.-|+-++-.    ....|+.+|-..+.+.++++-.
T Consensus        19 ~~p~~~l~q~~Tp~~ia~~-~~~~a~~~~dl-~g~~vlDlg~G~G~l~i~a~~~----g~~~v~~vDid~~~~~~a~~N~   92 (207)
T 1wy7_A           19 KNPKVWLEQYRTPGNAASE-LLWLAYSLGDI-EGKVVADLGAGTGVLSYGALLL----GAKEVICVEVDKEAVDVLIENL   92 (207)
T ss_dssp             SSCCGGGTCCCCCHHHHHH-HHHHHHHTTSS-TTCEEEEETCTTCHHHHHHHHT----TCSEEEEEESCHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCHHHHHH-HHHHHHHCCCC-CCCEEEECCCCCCHHHHHHHHC----CCCEEEEECCCHHHHHHHHHHH
T ss_conf             9997351137999999999-99999864987-9898999134256999999974----9986999879899999999999


Q ss_pred             HHHCCCCEEEECHHHHHHHCCCCCCEEEECC
Q ss_conf             9738980998042665331247986999914
Q gi|254780807|r  119 QKTAARGKVFACRIQEAPQMITTCDVISARA  149 (168)
Q Consensus       119 ~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA  149 (168)
                      ..+++++.++.+.++++   ..+||+|++-.
T Consensus        93 ~~~~~~~~~~~~d~~~~---~~~~D~ii~np  120 (207)
T 1wy7_A           93 GEFKGKFKVFIGDVSEF---NSRVDIVIMNP  120 (207)
T ss_dssp             GGGTTSEEEEESCGGGC---CCCCSEEEECC
T ss_pred             HHCCCCCEEEECCHHHH---HCCCCEEECCC
T ss_conf             98399827997667886---14654644488


No 57 
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.98  E-value=1.6e-05  Score=51.53  Aligned_cols=80  Identities=11%  Similarity=0.026  Sum_probs=63.7

Q ss_pred             HCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEE
Q ss_conf             00123443111114677335656522755466347875000038999999999738980998042665331247986999
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      ..++.+.+|+|+|+|.|.-.++++-..|+.   .|+.+|-+..-+.+.++-...++.++......+.... ...+||+|+
T Consensus       128 ~~~~~~~~vlD~GcG~G~~~~~l~~~~~~~---~v~g~D~s~~~i~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~  203 (281)
T 3lcv_B          128 RHLPRPNTLRDLACGLNPLAAPWMGLPAET---VYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTL  203 (281)
T ss_dssp             GGSCCCSEEEETTCTTGGGCCTTTTCCTTC---EEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEE
T ss_pred             HHCCCCCEEEEECCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHC-CCCCCCEEE
T ss_conf             648999869983898888999999749977---4999659999999999999866887389981354407-655656776


Q ss_pred             ECCC
Q ss_conf             9147
Q gi|254780807|r  147 ARAL  150 (168)
Q Consensus       147 sRA~  150 (168)
                      +-.+
T Consensus       204 ~~~v  207 (281)
T 3lcv_B          204 LLKT  207 (281)
T ss_dssp             ETTC
T ss_pred             EHHH
T ss_conf             5344


No 58 
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.97  E-value=2.3e-05  Score=50.51  Aligned_cols=93  Identities=18%  Similarity=0.138  Sum_probs=67.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             2344311111467733565652275546634787500003899999999973898-099804266533124798699991
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      +...+++|+|+|.|-....++--.    ...|+.+|.++.-+...++-....+.. ++++++.+++++....+||+|++.
T Consensus        78 ~~~~~vLDiGcG~G~~~~~ll~~~----~~~v~~vD~s~~~l~~ar~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~I~~~  153 (241)
T 2ex4_A           78 TGTSCALDCGAGIGRITKRLLLPL----FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQ  153 (241)
T ss_dssp             CCCSEEEEETCTTTHHHHHTTTTT----CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCEEEEC
T ss_conf             788769990157078699999705----9989999999999999998776504663489957888715775783189964


Q ss_pred             CCCC------HHHHHHHHHHHHCC
Q ss_conf             4799------89999984885206
Q gi|254780807|r  149 ALAD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a~------l~~ll~~~~pllk~  166 (168)
                      .+-.      +..+++-+...||+
T Consensus       154 ~vl~hl~d~~~~~~l~~~~~~Lkp  177 (241)
T 2ex4_A          154 WVIGHLTDQHLAEFLRRCKGSLRP  177 (241)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred             CCHHCCCCHHHHHHHHHHHHHCCC
T ss_conf             651047567889999999983199


No 59 
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative, SAM-dependent methyltransferase; HET: SAI; 1.94A {Leishmania major strain friedlin} SCOP: c.66.1.42
Probab=97.96  E-value=1.7e-05  Score=51.33  Aligned_cols=89  Identities=18%  Similarity=0.056  Sum_probs=60.8

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CC-EEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             34431111146773356565227554663478750000389999999997389-80-99804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG-KVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~-~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+++|+|+|.|.....++.-..    ..|++||.+..-+..   +.+.+.- .+ ..++..++++.....+||+|++.
T Consensus        93 ~~~~vLDiGcG~G~~t~~ll~~~~----~~V~~vD~s~~~l~~---a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~  165 (254)
T 1xtp_A           93 GTSRALDCGAGIGRITKNLLTKLY----ATTDLLEPVKHMLEE---AKRELAGMPVGKFILASMETATLPPNTYDLIVIQ  165 (254)
T ss_dssp             CCSEEEEETCTTTHHHHHTHHHHC----SEEEEEESCHHHHHH---HHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCC----CEEEEEECCHHHHHH---HHHCCCCCCEEEEEECCHHHCCCCCCCCCEEEEE
T ss_conf             897389966788599999998639----858999198899999---8640157742799977875688877763467642


Q ss_pred             CCCC------HHHHHHHHHHHHCC
Q ss_conf             4799------89999984885206
Q gi|254780807|r  149 ALAD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a~------l~~ll~~~~pllk~  166 (168)
                      .+..      +..+++-+...|++
T Consensus       166 ~~l~hl~d~~~~~~l~~~~~~Lkp  189 (254)
T 1xtp_A          166 WTAIYLTDADFVKFFKHCQQALTP  189 (254)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred             EEHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             110047614578999999998189


No 60 
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.96  E-value=3e-05  Score=49.91  Aligned_cols=74  Identities=15%  Similarity=0.026  Sum_probs=61.1

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             2344311111467733565652275546634787500003899999999973898--09980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      ..+.+++|+|+|.|--++.+|-.     +..|+.||.+...+...++-++..++.  ++++++.+.++.. ..+||+|++
T Consensus        77 ~~~~~vlD~gcG~G~~~~~la~~-----~~~v~~iD~s~~~i~~a~~n~~~~~~~~~i~~~~~D~~~~~~-~~~~D~i~~  150 (241)
T 3gdh_A           77 FKCDVVVDAFCGVGGNTIQFALT-----GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-FLKADVVFL  150 (241)
T ss_dssp             SCCSEEEETTCTTSHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG-GCCCSEEEE
T ss_pred             CCCCEEEECCCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH-CCCCEEEEE
T ss_conf             89998999378736889999967-----998999989778889999999984998743999764866414-378449998


Q ss_pred             CC
Q ss_conf             14
Q gi|254780807|r  148 RA  149 (168)
Q Consensus       148 RA  149 (168)
                      -.
T Consensus       151 ~p  152 (241)
T 3gdh_A          151 SP  152 (241)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             37


No 61 
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, structural genomics; 2.00A {Methanocaldococcus jannaschii DSM2661}
Probab=97.96  E-value=2.5e-05  Score=50.40  Aligned_cols=81  Identities=19%  Similarity=0.153  Sum_probs=63.1

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             23443111114677335656522755466347875000038999999999738980-99804266533124798699991
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ..+.+++|||||.|+-.-++|-+-.+  ...|+.+|..+.-+.+.++...+++.+| .++++...+......+||.|..-
T Consensus        76 ~~g~~VLeIGtGsGY~ta~la~l~g~--~g~V~~iE~~~~l~~~a~~~l~~~~~~nv~~~~gd~~~g~~~~~~fD~I~v~  153 (215)
T 2yxe_A           76 KPGMKVLEIGTGCGYHAAVTAEIVGE--DGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTT  153 (215)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEES
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEE
T ss_conf             99988998278841999999998488--8718999528899999999998615664499988865575346886489994


Q ss_pred             CCCC
Q ss_conf             4799
Q gi|254780807|r  149 ALAD  152 (168)
Q Consensus       149 A~a~  152 (168)
                      |-.+
T Consensus       154 ~~~~  157 (215)
T 2yxe_A          154 AAGP  157 (215)
T ss_dssp             SBBS
T ss_pred             CCCH
T ss_conf             5610


No 62 
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.94  E-value=8.3e-05  Score=47.33  Aligned_cols=95  Identities=18%  Similarity=0.136  Sum_probs=76.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHH-HHH-----CCCC
Q ss_conf             2344311111467733565652275546634787500003899999999973898--0998042665-331-----2479
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQE-APQ-----MITT  141 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~-~~~-----~~~~  141 (168)
                      -+.++++.||||.|+=++-+|-..|+  .++++.+|...+.+.+-+...++.++.  ++++.+.+.+ +++     ...+
T Consensus        68 ~~~k~vLEiGt~~GySal~lA~al~~--~g~v~tie~~~~~~~~Ar~~~~~ag~~~~i~~~~g~a~e~l~~l~~~~~~~~  145 (229)
T 2avd_A           68 IQAKKALDLGTFTGYSALALALALPA--DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT  145 (229)
T ss_dssp             TTCCEEEEECCTTSHHHHHHHTTSCT--TCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred             HCCCEEEEEECCCCHHHHHHHHCCCC--CCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCC
T ss_conf             49978999844468999999943799--9789999574659999999999769988569999500456777764135777


Q ss_pred             CCEEEECCC-CCHHHHHHHHHHHHCC
Q ss_conf             869999147-9989999984885206
Q gi|254780807|r  142 CDVISARAL-ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       142 ~d~v~sRA~-a~l~~ll~~~~pllk~  166 (168)
                      ||+|..-|- ......++++.++|++
T Consensus       146 fD~iFiDa~k~~y~~~~~~~~~lL~~  171 (229)
T 2avd_A          146 FDVAVVDADKENCSAYYERCLQLLRP  171 (229)
T ss_dssp             EEEEEECSCSTTHHHHHHHHHHHEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf             21899438877779999999965589


No 63 
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.93  E-value=1.7e-05  Score=51.27  Aligned_cols=95  Identities=14%  Similarity=0.172  Sum_probs=64.4

Q ss_pred             HCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEE
Q ss_conf             00123443111114677335656522755466347875000038999999999738980998042665331247986999
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      ....++.+|+|||+|.|.-...++=.+|..   .++.+|.++.-+...++-.. -+.++.++++.+++.+ ..++||+|+
T Consensus        40 ~~~~~~~~VLDiGcG~G~~~~~l~~~~~~~---~v~giD~s~~~l~~A~~~~~-~~~~v~~~~~D~~~~~-~~~~fD~I~  114 (234)
T 3dtn_A           40 SVDTENPDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFR-GNLKVKYIEADYSKYD-FEEKYDMVV  114 (234)
T ss_dssp             CCSCSSCEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTC-SCTTEEEEESCTTTCC-CCSCEEEEE
T ss_pred             HCCCCCCEEEEECCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHH-CCCCEEEEEEECCCCC-CCCCHHHHH
T ss_conf             356999959998176859999999988996---89999585045789998630-2776247742001345-445513455


Q ss_pred             ECCC----CCH--HHHHHHHHHHHCC
Q ss_conf             9147----998--9999984885206
Q gi|254780807|r  147 ARAL----ADL--DTLLEYSFPWLYQ  166 (168)
Q Consensus       147 sRA~----a~l--~~ll~~~~pllk~  166 (168)
                      ++.+    .+.  ..++.-+..+|++
T Consensus       115 ~~~~l~~l~~~~~~~~l~~~~~~Lkp  140 (234)
T 3dtn_A          115 SALSIHHLEDEDKKELYKRSYSILKE  140 (234)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             57778708938899879999976589


No 64 
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.92  E-value=5e-05  Score=48.58  Aligned_cols=95  Identities=12%  Similarity=0.065  Sum_probs=77.6

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHH-HH------CCC
Q ss_conf             2344311111467733565652275546634787500003899999999973898--09980426653-31------247
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEA-PQ------MIT  140 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~-~~------~~~  140 (168)
                      .++++++.||||.|+=++-+|-..|+  ++.++-+|.......+-++..++.|+.  +.++.+.+.+. +.      ...
T Consensus        69 ~~~k~vLEiGT~~GyStl~la~al~~--~g~v~tie~~~~~~~~A~~~~~~ag~~~~i~~~~g~a~e~l~~l~~~~~~~~  146 (237)
T 3c3y_A           69 VNAKKTIEVGVFTGYSLLLTALSIPD--DGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG  146 (237)
T ss_dssp             TTCCEEEEECCTTSHHHHHHHHHSCT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred             HCCCEEEEEECCCCHHHHHHHHHCCC--CCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCC
T ss_conf             39988999705257899999974899--8489999602676899999999849981389996220000178887403577


Q ss_pred             CCCEEEECC-CCCHHHHHHHHHHHHCC
Q ss_conf             986999914-79989999984885206
Q gi|254780807|r  141 TCDVISARA-LADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       141 ~~d~v~sRA-~a~l~~ll~~~~pllk~  166 (168)
                      +||+|..-| -......++++.|+|++
T Consensus       147 ~fD~IFiDadk~~y~~y~e~~~~lL~~  173 (237)
T 3c3y_A          147 SYDFGFVDADKPNYIKYHERLMKLVKV  173 (237)
T ss_dssp             CEEEEEECSCGGGHHHHHHHHHHHEEE
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf             765899728888899999999865489


No 65 
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} SCOP: c.66.1.47 PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.91  E-value=3.5e-05  Score=49.48  Aligned_cols=96  Identities=11%  Similarity=0.089  Sum_probs=72.4

Q ss_pred             HHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCC
Q ss_conf             10012344311111467733565652275546634787500003899999999973898--0998042665331247986
Q gi|254780807|r   66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCD  143 (168)
Q Consensus        66 ~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d  143 (168)
                      ...+..+.+++|+|+|.|.=++++|-. +   ...|+.+|.++.-+.++++-++..++.  ++++++.+.++.. ...||
T Consensus       120 ~~~~~~g~~VlDl~aG~G~~~l~~a~~-~---~~~V~avD~n~~a~~~~~~N~~~n~~~~~v~~~~~D~~~~~~-~~~~D  194 (278)
T 2frn_A          120 AKVAKPDELVVDMFAGIGHLSLPIAVY-G---KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIAD  194 (278)
T ss_dssp             HHHCCTTCEEEETTCTTTTTHHHHHHH-T---CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEE
T ss_pred             HHHCCCCCEEEECCCCCCHHHHHHHHH-C---CCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCC-CCCCC
T ss_conf             965369988999177051999999997-4---986999979999999999999980999848999681999446-66886


Q ss_pred             EEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             99991479989999984885206
Q gi|254780807|r  144 VISARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       144 ~v~sRA~a~l~~ll~~~~pllk~  166 (168)
                      .|+.=-......+++-+.++|++
T Consensus       195 ~Vim~~p~~~~~~l~~a~~~lk~  217 (278)
T 2frn_A          195 RILMGYVVRTHEFIPKALSIAKD  217 (278)
T ss_dssp             EEEECCCSSGGGGHHHHHHHEEE
T ss_pred             EEEECCCCCHHHHHHHHHHHCCC
T ss_conf             99989985269999999996689


No 66 
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.91  E-value=7e-05  Score=47.75  Aligned_cols=99  Identities=14%  Similarity=-0.021  Sum_probs=65.7

Q ss_pred             HHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCC
Q ss_conf             310012344311111467733565652275546634787500003899999999973898--099804266533124798
Q gi|254780807|r   65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTC  142 (168)
Q Consensus        65 ~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~  142 (168)
                      ++.+++.+.+++|||||.|+=++-++-..+..   +|+.+|-++.-+...++-+++.++.  ++++.+..-+.......+
T Consensus        15 ia~~v~~g~~vlDIG~g~G~l~i~l~~~~~~~---~viavDi~~~~l~~A~~n~~~~gl~~~I~~~~~Dgl~~~~~~e~~   91 (230)
T 3lec_A           15 VANYVPKGARLLDVGSDHAYLPIFLLQMGYCD---FAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNI   91 (230)
T ss_dssp             HHTTSCTTEEEEEETCSTTHHHHHHHHTTCEE---EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCC
T ss_pred             HHHHCCCCCEEEEECCCHHHHHHHHHHCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf             99658998999995286499999999839998---799930999999999999998399875799988754100455541


Q ss_pred             C-EEEECCCCC-HHHHHHHHHHHHCC
Q ss_conf             6-999914799-89999984885206
Q gi|254780807|r  143 D-VISARALAD-LDTLLEYSFPWLYQ  166 (168)
Q Consensus       143 d-~v~sRA~a~-l~~ll~~~~pllk~  166 (168)
                      | +++|---+. +..+++-....++.
T Consensus        92 d~iiiag~g~~~i~~Il~~~~~~l~~  117 (230)
T 3lec_A           92 DTITICGMGGRLIADILNNDIDKLQH  117 (230)
T ss_dssp             CEEEEEEECHHHHHHHHHHTGGGGTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf             27864287588999999999986488


No 67 
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.90  E-value=4.3e-05  Score=49.00  Aligned_cols=95  Identities=9%  Similarity=0.057  Sum_probs=66.8

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC---CCEEEECHHHHHHH------C
Q ss_conf             123443111114677335656522-7554663478750000389999999997389---80998042665331------2
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAA---RGKVFACRIQEAPQ------M  138 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L---~~~vi~~r~e~~~~------~  138 (168)
                      ..++.+|+|||+|.|...+.||=. .|.   .+|+.+|.++.-+...++...+.+.   +++...+++|+...      .
T Consensus        34 ~~~~~~VLDiGCGtG~~t~~la~~~~~~---~~V~gvD~S~~mi~~a~~~~~~~~~~~~~v~~~~~dae~~~~~~~~~~~  110 (299)
T 3g5t_A           34 DGERKLLVDVGCGPGTATLQMAQELKPF---EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVD  110 (299)
T ss_dssp             CSCCSEEEEETCTTTHHHHHHHHHSSCC---SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTT
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCCC---CEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCCCCCCCC
T ss_conf             7899969998260889999999964999---8799985988999999999986366753246898337765442123466


Q ss_pred             CCCCCEEEECCCCC---HHHHHHHHHHHHCC
Q ss_conf             47986999914799---89999984885206
Q gi|254780807|r  139 ITTCDVISARALAD---LDTLLEYSFPWLYQ  166 (168)
Q Consensus       139 ~~~~d~v~sRA~a~---l~~ll~~~~pllk~  166 (168)
                      .+.||+|+|..+-.   .+..++-..+.||+
T Consensus       111 ~~~fD~V~~~~~~h~~d~~~~l~e~~r~Lkp  141 (299)
T 3g5t_A          111 KQKIDMITAVECAHWFDFEKFQRSAYANLRK  141 (299)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHEEE
T ss_pred             CCCCCEEEEECCEECCCHHHHHHHHHHHHHC
T ss_conf             5565478870036315617899999999523


No 68 
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.66.1.43
Probab=97.89  E-value=8.3e-05  Score=47.34  Aligned_cols=90  Identities=16%  Similarity=0.114  Sum_probs=66.8

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEEC-C
Q ss_conf             344311111467733565652275546634787500003899999999973898099804266533124798699991-4
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR-A  149 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sR-A  149 (168)
                      +..+|+|+|+|.|.-.+.++=.     +..++.+|.+++-+...++-..+.+++.+++++.+++++. ..+||.|++- +
T Consensus        41 ~~~~ILDiGcGtG~~~~~l~~~-----g~~v~gvD~s~~ml~~a~~~~~~~~~~~~~~~~d~~~l~~-~~~fD~V~~~~~  114 (252)
T 1wzn_A           41 EVRRVLDLACGTGIPTLELAER-----GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-KNEFDAVTMFFS  114 (252)
T ss_dssp             CCCEEEEETCTTCHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-CSCEEEEEECSS
T ss_pred             CCCEEEEECCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCHHHCCC-CCCCCEEEEECC
T ss_conf             9898999547586999999976-----9989999746889999999776428752368655420566-777548999615


Q ss_pred             C---CC---HHHHHHHHHHHHCC
Q ss_conf             7---99---89999984885206
Q gi|254780807|r  150 L---AD---LDTLLEYSFPWLYQ  166 (168)
Q Consensus       150 ~---a~---l~~ll~~~~pllk~  166 (168)
                      +   .+   +...+.-....|++
T Consensus       115 ~~~~~~~~~~~~~l~~~~~~Lkp  137 (252)
T 1wzn_A          115 TIMYFDEEDLRKLFSKVAEALKP  137 (252)
T ss_dssp             GGGGSCHHHHHHHHHHHHHHEEE
T ss_pred             CHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             11128878999999999997697


No 69 
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=97.89  E-value=3.1e-05  Score=49.82  Aligned_cols=91  Identities=16%  Similarity=0.192  Sum_probs=63.1

Q ss_pred             HHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEE
Q ss_conf             10012344311111467733565652275546634787500003899999999973898099804266533124798699
Q gi|254780807|r   66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI  145 (168)
Q Consensus        66 ~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v  145 (168)
                      -++.+.+.+|+|+|+|.|.-...+|=.     +..|+.+|.++.-+...+   + -+.. .++++++++++-..++||+|
T Consensus        49 ~~~~~~~~~VLDiGCGtG~~~~~la~~-----g~~v~giD~S~~ml~~Ak---~-~~~~-~~~~~~~~~l~~~~~~fD~I  118 (260)
T 2avn_A           49 EEYLKNPCRVLDLGGGTGKWSLFLQER-----GFEVVLVDPSKEMLEVAR---E-KGVK-NVVEAKAEDLPFPSGAFEAV  118 (260)
T ss_dssp             HHHCCSCCEEEEETCTTCHHHHHHHTT-----TCEEEEEESCHHHHHHHH---H-HTCS-CEEECCTTSCCSCTTCEEEE
T ss_pred             HHHCCCCCEEEEECCCCCHHHHHHHHC-----CCEEEEEECHHHHHHHHH---H-HCCC-CCCCCHHHHCCCCCCCCCHH
T ss_conf             985799698999899998889999861-----998999935237889998---8-3632-20001575088864673565


Q ss_pred             EEC--C---CCCHHHHHHHHHHHHCC
Q ss_conf             991--4---79989999984885206
Q gi|254780807|r  146 SAR--A---LADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       146 ~sR--A---~a~l~~ll~~~~pllk~  166 (168)
                      +|-  +   +.++..++.-....||+
T Consensus       119 is~~~vl~hi~d~~~~l~~i~r~Lk~  144 (260)
T 2avn_A          119 LALGDVLSYVENKDKAFSEIRRVLVP  144 (260)
T ss_dssp             EECSSHHHHCSCHHHHHHHHHHHEEE
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf             50577741677899999999997398


No 70 
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.86  E-value=0.00012  Score=46.37  Aligned_cols=92  Identities=14%  Similarity=0.004  Sum_probs=72.2

Q ss_pred             CCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHH--CCCCCCEEEEC
Q ss_conf             443111114677335656522755466347875000038999999999738980-998042665331--24798699991
Q gi|254780807|r   72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ--MITTCDVISAR  148 (168)
Q Consensus        72 ~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~--~~~~~d~v~sR  148 (168)
                      ...++|||+|.|---+-+|-.+|+..   ++.+|.+.+.+.....-+.+.+++| .++++.++++.+  ....+|.|..=
T Consensus        39 ~p~vLEIGcG~G~~~~~lA~~~p~~~---~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~da~~l~~~~~~~~~d~v~i~  115 (213)
T 2fca_A           39 NPIHIEVGTGKGQFISGMAKQNPDIN---YIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN  115 (213)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHCTTSE---EEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred             CCEEEEEECCCCHHHHHHHHHCCCCC---EEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCEEEEEEE
T ss_conf             95299980358899999998689982---899983599999999999983885446784365887751377643588871


Q ss_pred             CCCCH------------HHHHHHHHHHHCC
Q ss_conf             47998------------9999984885206
Q gi|254780807|r  149 ALADL------------DTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a~l------------~~ll~~~~pllk~  166 (168)
                      -.-|+            +.+++.....||+
T Consensus       116 fpdPw~k~~h~krRl~~~~~l~~i~r~Lkp  145 (213)
T 2fca_A          116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGK  145 (213)
T ss_dssp             SCCCCCSGGGGGGSTTSHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             356553100003654218999999983799


No 71 
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.83  E-value=9.6e-05  Score=46.96  Aligned_cols=95  Identities=11%  Similarity=0.058  Sum_probs=77.1

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHH-HHHC--------
Q ss_conf             2344311111467733565652275546634787500003899999999973898--0998042665-3312--------
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQE-APQM--------  138 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~-~~~~--------  138 (168)
                      .+.++++.|||+.|+-++-+|-..|+  ++.++-+|...+++..-++..++.|+.  ++++.+++-+ ++..        
T Consensus        59 ~~ak~iLEiGT~~GySal~lA~al~~--~g~v~tie~~~~~~~~A~~~~~~ag~~~~I~~~~g~A~e~L~~L~~~~~~~~  136 (239)
T 2hnk_A           59 SGAKRIIEIGTFTGYSSLCFASALPE--DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS  136 (239)
T ss_dssp             HTCSEEEEECCTTCHHHHHHHHHSCT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred             HCCCEEEEEECCCCHHHHHHHHHCCC--CCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHCCCCCC
T ss_conf             29977999725458899999971787--8868999453888999999999879962599996168999999884523332


Q ss_pred             --------CCCCCEEEECCCCC-HHHHHHHHHHHHCC
Q ss_conf             --------47986999914799-89999984885206
Q gi|254780807|r  139 --------ITTCDVISARALAD-LDTLLEYSFPWLYQ  166 (168)
Q Consensus       139 --------~~~~d~v~sRA~a~-l~~ll~~~~pllk~  166 (168)
                              .++||+|+--|-.+ ....++++.++|++
T Consensus       137 ~~~~~~~~~~~fD~IFiDa~K~~Y~~y~~~~~~lL~~  173 (239)
T 2hnk_A          137 WASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKP  173 (239)
T ss_dssp             GGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEE
T ss_pred             CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCC
T ss_conf             1100124677756899937877759999999997279


No 72 
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase- like protein, methyltransferase domain; 1.85A {Lactobacillus casei atcc 334}
Probab=97.82  E-value=0.00014  Score=46.10  Aligned_cols=95  Identities=15%  Similarity=0.003  Sum_probs=67.6

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCC-CCCCCCEEEEEHHHHH------HHHHHHHHHHHHCC-CC-EEEECHHHH---HH
Q ss_conf             1234431111146773356565227-5546634787500003------89999999997389-80-998042665---33
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQL-SSIEGGLVNLIESKNK------KASFLRYVVQKTAA-RG-KVFACRIQE---AP  136 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~-p~~~~~~v~Lves~~K------K~~FL~~~~~~L~L-~~-~vi~~r~e~---~~  136 (168)
                      ++.+.+|+|+|+|.|.....+|=.. |+   .+|+.||.+.-      -+...+.-..+.++ ++ ++..+.+++   .+
T Consensus        41 i~pG~rVLDiGCG~G~~t~~la~~~g~~---~~V~gvD~s~~~~~~~~~l~~A~~~~~~~~~~~~i~~~~~d~~~~~~lp  117 (275)
T 3bkx_A           41 VKPGEKILEIGCGQGDLSAVLADQVGSS---GHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP  117 (275)
T ss_dssp             CCTTCEEEEESCTTSHHHHHHHHHHCTT---CEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHCCC---CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHCCCC
T ss_conf             7986989996653885789999983877---7523476777776666899999999885577774010200154402476


Q ss_pred             HCCCCCCEEEECCC----CCHHHHHHHHHHHHCC
Q ss_conf             12479869999147----9989999984885206
Q gi|254780807|r  137 QMITTCDVISARAL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       137 ~~~~~~d~v~sRA~----a~l~~ll~~~~pllk~  166 (168)
                      -..++||.|+|+.+    .+....++....+||+
T Consensus       118 ~~~~sFD~V~~~~~l~~~~d~~~~l~~~~rvLkp  151 (275)
T 3bkx_A          118 IADQHFDRVVLAHSLWYFASANALALLFKNMAAV  151 (275)
T ss_dssp             GTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTT
T ss_pred             CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf             4457626897801633289999999999997687


No 73 
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.81  E-value=4.7e-05  Score=48.77  Aligned_cols=92  Identities=14%  Similarity=0.007  Sum_probs=68.5

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             2344311111467733565652275546634787500003899999999973898--09980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      +.+.+|+|||+|.|-..+.++-. +   +..++.||.+..-+...+..+.+.|+.  ++++.+.+++.. ....||.|++
T Consensus        35 ~pg~rVLDiGcG~G~~~~~la~~-~---~~~v~gvD~s~~~l~~a~~~~~~~gl~~~v~~~~~d~~~~~-~~~~fD~v~~  109 (256)
T 1nkv_A           35 KPGTRILDLGSGSGEMLCTWARD-H---GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-ANEKCDVAAC  109 (256)
T ss_dssp             CTTCEEEEETCTTCHHHHHHHHH-T---CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-CSSCEEEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHH-C---CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC-CCCCEEEEEE
T ss_conf             99999999858888899999986-4---99899998983677899886776065544441136364505-6784469999


Q ss_pred             CCC----CCHHHHHHHHHHHHCC
Q ss_conf             147----9989999984885206
Q gi|254780807|r  148 RAL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA~----a~l~~ll~~~~pllk~  166 (168)
                      ..+    .+...+++-....||+
T Consensus       110 ~~~~~~~~~~~~~l~~~~r~Lkp  132 (256)
T 1nkv_A          110 VGATWIAGGFAGAEELLAQSLKP  132 (256)
T ss_dssp             ESCGGGTSSSHHHHHHHTTSEEE
T ss_pred             ECCEECCCCHHHHHHHHHHHCCC
T ss_conf             74410268999999999997393


No 74 
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus HB8} SCOP: c.66.1.46
Probab=97.80  E-value=7.3e-05  Score=47.67  Aligned_cols=76  Identities=20%  Similarity=0.187  Sum_probs=58.9

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHH----HHCCCCCC
Q ss_conf             01234431111146773356565227554663478750000389999999997389809980426653----31247986
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITTCD  143 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~----~~~~~~~d  143 (168)
                      ...++++|+|+|+|.|--|+..+-     .+.+++.+|.+...+..+++-++.+++++.++...+...    .....+||
T Consensus        38 ~~~~~~~vLDl~~G~G~~~i~a~~-----~ga~vv~vD~~~~ai~~~~~N~~~~g~~~~v~~~~~d~~~~~~~~~~~~fD  112 (171)
T 1ws6_A           38 RYPRRGRFLDPFAGSGAVGLEAAS-----EGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFT  112 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHHHHHH-----TTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEE
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHH-----CCCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCEE
T ss_conf             457979899962067899999998-----089530060687899999987886066555999778987555553388557


Q ss_pred             EEEEC
Q ss_conf             99991
Q gi|254780807|r  144 VISAR  148 (168)
Q Consensus       144 ~v~sR  148 (168)
                      +|++=
T Consensus       113 lI~~D  117 (171)
T 1ws6_A          113 VAFMA  117 (171)
T ss_dssp             EEEEC
T ss_pred             EEEEC
T ss_conf             99987


No 75 
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.79  E-value=7.5e-05  Score=47.59  Aligned_cols=93  Identities=12%  Similarity=0.061  Sum_probs=65.5

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC------CEEEECHHHHHHHCCCCCCE
Q ss_conf             344311111467733565652275546634787500003899999999973898------09980426653312479869
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR------GKVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~------~~vi~~r~e~~~~~~~~~d~  144 (168)
                      .+++|+|+|+|.|.....|+-..+..   .|+.+|.+..-+...++.....++.      ........++.+....+||+
T Consensus        29 ~~~rVLDvGCG~G~~~~~La~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~  105 (219)
T 3jwg_A           29 NAKKVIDLGCGEGNLLSLLLKDKSFE---QITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDA  105 (219)
T ss_dssp             TCCEEEEETCTTCHHHHHHHTSTTCC---EEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSE
T ss_pred             CCCEEEEEECCCCHHHHHHHHHCCCC---EEEECCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHCCHHCCCCCE
T ss_conf             84989998187899999999838974---563225999999999998655044123200100011453325000365545


Q ss_pred             EEECCCCC------HHHHHHHHHHHHCC
Q ss_conf             99914799------89999984885206
Q gi|254780807|r  145 ISARALAD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       145 v~sRA~a~------l~~ll~~~~pllk~  166 (168)
                      |++..+-.      +..+++....++++
T Consensus       106 i~~~~vl~hl~~~~~~~~l~~~~~ll~p  133 (219)
T 3jwg_A          106 ATVIEVIEHLDENRLQAFEKVLFEFTRP  133 (219)
T ss_dssp             EEEESCGGGCCHHHHHHHHHHHHTTTCC
T ss_pred             EHHHHHHHHCCHHHHHHHHHHHHHHCCC
T ss_conf             6275569718958999999999973789


No 76 
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus HB27}
Probab=97.78  E-value=7.4e-05  Score=47.61  Aligned_cols=94  Identities=15%  Similarity=0.096  Sum_probs=68.4

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CC-EEEECHHHHHHHCCCCCCEE
Q ss_conf             123443111114677335656522-7554663478750000389999999997389-80-99804266533124798699
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG-KVFACRIQEAPQMITTCDVI  145 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~-~vi~~r~e~~~~~~~~~d~v  145 (168)
                      +..+.+++|+|||.|.-.+.+|-. .|+   ..|+.+|.++..+...++-++..++ ++ .++...+++.......||.|
T Consensus        94 i~pG~~VLEiG~GsG~lt~~lA~~v~~~---g~V~~~d~~~~~~~~A~~n~~~~~~~~~v~~~~~d~~~~~~~~~~~d~v  170 (258)
T 2pwy_A           94 LAPGMRVLEAGTGSGGLTLFLARAVGEK---GLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGV  170 (258)
T ss_dssp             CCTTCEEEEECCTTSHHHHHHHHHHCTT---SEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEE
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHCCCC---CEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCCCEE
T ss_conf             8999999987770679999999972887---3899984899999999999998089985568836578855556432389


Q ss_pred             EECCCCCHHHHHHHHHHHHCC
Q ss_conf             991479989999984885206
Q gi|254780807|r  146 SARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       146 ~sRA~a~l~~ll~~~~pllk~  166 (168)
                      +.-.-.|+. .++-+.+.||+
T Consensus       171 ~ld~p~p~~-~l~~~~~~LKp  190 (258)
T 2pwy_A          171 ALDLMEPWK-VLEKAALALKP  190 (258)
T ss_dssp             EEESSCGGG-GHHHHHHHEEE
T ss_pred             EECCCCHHH-HHHHHHHHCCC
T ss_conf             964889999-99999986678


No 77 
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltransferase, structural genomics, PSI-2, protein structure initiative; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.77  E-value=8.1e-05  Score=47.41  Aligned_cols=89  Identities=15%  Similarity=0.105  Sum_probs=63.1

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECC
Q ss_conf             23443111114677335656522755466347875000038999999999738980998042665331247986999914
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA  149 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA  149 (168)
                      ..+.+|+|||+|.|--...|+=-+|.   ..|+.+|.+..-+   +.+.+. .-+..+....+++++. .++||.|+|++
T Consensus        32 ~~~~rVLDiGCGtG~~t~~la~~~~~---~~v~gvD~S~~ml---~~A~~~-~~~v~~~~~d~~~~~~-~~~fD~V~s~~  103 (259)
T 2p35_A           32 ERVLNGYDLGCGPGNSTELLTDRYGV---NVITGIDSDDDML---EKAADR-LPNTNFGKADLATWKP-AQKADLLYANA  103 (259)
T ss_dssp             SCCSSEEEETCTTTHHHHHHHHHHCT---TSEEEEESCHHHH---HHHHHH-STTSEEEECCTTTCCC-SSCEEEEEEES
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHCCC---CEEEEEECCHHHH---HHHHHH-CCCCCCEEEEHHHCCC-CCCCCEECCCC
T ss_conf             89898999816286999999987899---8799998987999---999972-5663120142421243-54555641201


Q ss_pred             C----CCHHHHHHHHHHHHCC
Q ss_conf             7----9989999984885206
Q gi|254780807|r  150 L----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       150 ~----a~l~~ll~~~~pllk~  166 (168)
                      +    ..+..++.-....||+
T Consensus       104 ~l~~~~d~~~~l~~~~~~Lkp  124 (259)
T 2p35_A          104 VFQWVPDHLAVLSQLMDQLES  124 (259)
T ss_dssp             CGGGSTTHHHHHHHHGGGEEE
T ss_pred             EEEECCCHHHHHHHHHHHCCC
T ss_conf             577468889999999985399


No 78 
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.77  E-value=0.00012  Score=46.33  Aligned_cols=93  Identities=13%  Similarity=0.078  Sum_probs=64.7

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC------CCEEEECHHHHHHHCCCCCCE
Q ss_conf             34431111146773356565227554663478750000389999999997389------809980426653312479869
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA------RGKVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L------~~~vi~~r~e~~~~~~~~~d~  144 (168)
                      ...+|+|+|+|.|..+..|+=..|..   .|+.+|.+..-+..-++-....++      +........++.+....+||+
T Consensus        29 ~~~rVLDvGcG~G~~~~~l~~~~~~~---~v~gvD~s~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~  105 (217)
T 3jwh_A           29 NARRVIDLGCGQGNLLKILLKDSFFE---QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDA  105 (217)
T ss_dssp             TCCEEEEETCTTCHHHHHHHHCTTCS---EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSE
T ss_pred             CCCEEEEEECCCCHHHHHHHHHCCCC---EEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCHHCCCCCCE
T ss_conf             83989998188879999999847652---252103899999999998876245311222210012664344000476565


Q ss_pred             EEECCCC---C---HHHHHHHHHHHHCC
Q ss_conf             9991479---9---89999984885206
Q gi|254780807|r  145 ISARALA---D---LDTLLEYSFPWLYQ  166 (168)
Q Consensus       145 v~sRA~a---~---l~~ll~~~~pllk~  166 (168)
                      |++.-+-   +   ...+++....+|+.
T Consensus       106 I~~~~vl~hl~~~~~~~~l~~~~~~Lkp  133 (217)
T 3jwh_A          106 ATVIEVIEHLDLSRLGAFERVLFEFAQP  133 (217)
T ss_dssp             EEEESCGGGCCHHHHHHHHHHHHTTTCC
T ss_pred             EEEEHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             5010338718978999999999986589


No 79 
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1, methyltransferase domain, structural genomics; HET: MSE; 1.60A {Mesorhizobium loti MAFF303099}
Probab=97.76  E-value=5e-05  Score=48.62  Aligned_cols=89  Identities=13%  Similarity=0.035  Sum_probs=63.6

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHHHHHHCCCCCCEEEECC
Q ss_conf             34431111146773356565227554663478750000389999999997389-80998042665331247986999914
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA  149 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e~~~~~~~~~d~v~sRA  149 (168)
                      ++.+|+|||+|.|.....++-. +.   ..|+.+|.++.   ++.++.+...- .+..+++.+++.+-..+.||+|++..
T Consensus        43 ~g~rVLDiGCG~G~~~~~l~~~-~~---~~V~gvD~S~~---~l~~a~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~  115 (243)
T 3bkw_A           43 GGLRIVDLGCGFGWFCRWAHEH-GA---SYVLGLDLSEK---MLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSL  115 (243)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHT-TC---SEEEEEESCHH---HHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEES
T ss_pred             CCCEEEEECCCCCHHHHHHHHC-CC---CEEEEECCHHH---HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             8899999788898999999975-98---78999875798---99999861344433310023344665543454565513


Q ss_pred             C----CCHHHHHHHHHHHHCC
Q ss_conf             7----9989999984885206
Q gi|254780807|r  150 L----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       150 ~----a~l~~ll~~~~pllk~  166 (168)
                      +    ..+...++-....||+
T Consensus       116 ~l~~~~d~~~~l~ei~r~Lkp  136 (243)
T 3bkw_A          116 ALHYVEDVARLFRTVHQALSP  136 (243)
T ss_dssp             CGGGCSCHHHHHHHHHHHEEE
T ss_pred             EEEECCCHHHHHHHHHHHCCC
T ss_conf             676168999999999998385


No 80 
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.76  E-value=0.00012  Score=46.51  Aligned_cols=92  Identities=12%  Similarity=0.084  Sum_probs=65.9

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             01234431111146773356565227554663478750000389999999997389809980426653312479869999
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      .++++.+|+|+|+|.|-....+|   +   +..|+.+|.++.-+...++-..+.+.+++++++.+++++. ..+||.+++
T Consensus        30 ~~~~~~~VLD~GCG~G~~~~~la---~---~~~v~giD~s~~~l~~a~~~~~~~~~~i~~~~~d~~~~~~-~~~~d~v~~  102 (243)
T 3d2l_A           30 QVEPGKRIADIGCGTGTATLLLA---D---HYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELEL-PEPVDAITI  102 (243)
T ss_dssp             HSCTTCEEEEESCTTCHHHHHHT---T---TSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCC-SSCEEEEEE
T ss_pred             HCCCCCEEEEECCCCCHHHHHHH---H---CCEEEEEECCHHHHHHHHHHHHHCCCEEEECCCCHHCCCC-CCCCCCHHH
T ss_conf             68999999996887879999986---1---8579999885188999887653012023310120000112-434343134


Q ss_pred             C-----CCCC---HHHHHHHHHHHHCC
Q ss_conf             1-----4799---89999984885206
Q gi|254780807|r  148 R-----ALAD---LDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 R-----A~a~---l~~ll~~~~pllk~  166 (168)
                      -     .+.+   +..+++-....||+
T Consensus       103 ~~~s~~~l~~~~~~~~~l~~i~~~Lkp  129 (243)
T 3d2l_A          103 LCDSLNYLQTEADVKQTFDSAARLLTD  129 (243)
T ss_dssp             CTTGGGGCCSHHHHHHHHHHHHHHEEE
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHCCC
T ss_conf             332211156715778999999976488


No 81 
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural genomics, NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus VF5}
Probab=97.75  E-value=0.00012  Score=46.39  Aligned_cols=113  Identities=17%  Similarity=0.104  Sum_probs=77.8

Q ss_pred             ECCHHHHHHHHHH---------HHHHHHHC--CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHH
Q ss_conf             0899999898646---------35643100--123443111114677335656522755466347875000038999999
Q gi|254780807|r   48 SSTVEDFWIRHVE---------DSLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY  116 (168)
Q Consensus        48 ~~~~~~~~~rHi~---------DSl~~~~~--~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~  116 (168)
                      +-+..++|.+.+-         |+.++...  +..+.+++|+|||.|.-.+.||=.     ...|+-+|.++..+...++
T Consensus        57 ~p~~~d~~~~~~~r~~qiiypkD~~~Ii~~l~i~pG~rVLEiGtGsG~lt~~La~~-----~g~v~t~e~~e~~~~~A~~  131 (248)
T 2yvl_A           57 RPTLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-----AGEVWTFEAVEEFYKTAQK  131 (248)
T ss_dssp             CCCHHHHHHHTSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-----SSEEEEECSCHHHHHHHHH
T ss_pred             CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHC-----CCEEEEECCCHHHHHHHHH
T ss_conf             79808998454888874067899999999828999997997374311999999860-----7879998288999999999


Q ss_pred             HHHHHCC-CC-EEEECHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             9997389-80-99804266533124798699991479989999984885206
Q gi|254780807|r  117 VVQKTAA-RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       117 ~~~~L~L-~~-~vi~~r~e~~~~~~~~~d~v~sRA~a~l~~ll~~~~pllk~  166 (168)
                      -.++.++ ++ ++++..+.+..-....||.|+.-.-.|+.. ++-+.+.||+
T Consensus       132 n~~~~g~~~nv~~~~~D~~~~~~~~~~fD~V~ld~p~p~~~-l~~~~~~LKp  182 (248)
T 2yvl_A          132 NLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVREPWHY-LEKVHKSLME  182 (248)
T ss_dssp             HHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSSCGGGG-HHHHHHHBCT
T ss_pred             HHHHHCCCCCEEEEECCHHHCCCCCCCCCEEEEECCCHHHH-HHHHHHHCCC
T ss_conf             89970057705999912221432458789999917876888-9999984288


No 82 
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta- aspartate methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum 3D7}
Probab=97.74  E-value=0.00011  Score=46.69  Aligned_cols=85  Identities=20%  Similarity=0.245  Sum_probs=59.3

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCC--CCCEEEEEHHHHHHHHHHHHHHHH-----HCCCC-EEEECHHHHH----
Q ss_conf             01234431111146773356565227554--663478750000389999999997-----38980-9980426653----
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSI--EGGLVNLIESKNKKASFLRYVVQK-----TAARG-KVFACRIQEA----  135 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~--~~~~v~Lves~~KK~~FL~~~~~~-----L~L~~-~vi~~r~e~~----  135 (168)
                      .++.+.+++|||||.|+-...+|-+-..+  ...+|+.+|..+.-+.+-++..++     ++++| +++++.+.+.    
T Consensus        77 ~l~~g~~VLeIGtGsGY~ta~la~~~~~l~~~~g~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~gd~~~~~~~g  156 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE  156 (227)
T ss_dssp             TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred             HCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCC
T ss_conf             47998869983799739999999997652245653899970599999999999851044415575899977732012557


Q ss_pred             HHCCCCCCEEEECCCCC
Q ss_conf             31247986999914799
Q gi|254780807|r  136 PQMITTCDVISARALAD  152 (168)
Q Consensus       136 ~~~~~~~d~v~sRA~a~  152 (168)
                      .....+||.|..-|-.+
T Consensus       157 ~~~~~pfD~I~v~~a~~  173 (227)
T 2pbf_A          157 KKELGLFDAIHVGASAS  173 (227)
T ss_dssp             HHHHCCEEEEEECSBBS
T ss_pred             CCCCCCCCEEEEEECHH
T ss_conf             87678824799940435


No 83 
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.73  E-value=0.00017  Score=45.57  Aligned_cols=91  Identities=10%  Similarity=0.029  Sum_probs=66.0

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECCC
Q ss_conf             34431111146773356565227554663478750000389999999997389809980426653312479869999147
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL  150 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA~  150 (168)
                      .+++++|+|+|.|--.+.||=     .+..|+.+|.+..-+...++...+.++++.++...+++.+.....||.+++--.
T Consensus        29 ~~~~vLDlGcG~G~~~~~la~-----~G~~V~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~d~~~~~~~  103 (202)
T 2kw5_A           29 PQGKILCLAEGEGRNACFLAS-----LGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC  103 (202)
T ss_dssp             CSSEEEECCCSCTHHHHHHHT-----TTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC
T ss_pred             CCCCEEEECCCCCHHHHHHHH-----CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCEEEEEEEEE
T ss_conf             989399983778999999998-----699146777789999999998887199558998226338998895999851578


Q ss_pred             -CCHH---HHHHHHHHHHCC
Q ss_conf             -9989---999984885206
Q gi|254780807|r  151 -ADLD---TLLEYSFPWLYQ  166 (168)
Q Consensus       151 -a~l~---~ll~~~~pllk~  166 (168)
                       .+.+   .++.-....||+
T Consensus       104 ~~~~~~~~~~l~~~~~~Lkp  123 (202)
T 2kw5_A          104 HLPSSLRQQLYPKVYQGLKP  123 (202)
T ss_dssp             CCCHHHHHHHHHHHHTTCCS
T ss_pred             ECCHHHHHHHHHHHHHHCCC
T ss_conf             53788999999999998197


No 84 
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.72  E-value=4.7e-05  Score=48.74  Aligned_cols=80  Identities=8%  Similarity=-0.062  Sum_probs=54.6

Q ss_pred             HHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHHHHHHCCCCCCE
Q ss_conf             1001234431111146773356565227554663478750000389999999997389-809980426653312479869
Q gi|254780807|r   66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        66 ~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e~~~~~~~~~d~  144 (168)
                      ..+++.+.+|+|||+|.|.-+..|+-.    ....|+.||-++.-+...+...  -+. +...+...+++++-....||+
T Consensus        37 ~~~l~~~~~iLDiGCG~G~~~~~L~~~----g~~~v~giD~s~~~i~~~~~~~--~~~~~~~~~~~D~~~l~~~~~sFD~  110 (215)
T 2pxx_A           37 EPELRPEDRILVLGCGNSALSYELFLG----GFPNVTSVDYSSVVVAAMQACY--AHVPQLRWETMDVRKLDFPSASFDV  110 (215)
T ss_dssp             GGGCCTTCCEEEETCTTCSHHHHHHHT----TCCCEEEEESCHHHHHHHHHHT--TTCTTCEEEECCTTSCCSCSSCEEE
T ss_pred             HHHCCCCCEEEEECCCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHH--CCCCEEEEECCCCCCCCCCCCCEEE
T ss_conf             963899998999637777999999984----8983999827625667999983--4786354321454457789997789


Q ss_pred             EEECCCC
Q ss_conf             9991479
Q gi|254780807|r  145 ISARALA  151 (168)
Q Consensus       145 v~sRA~a  151 (168)
                      |+++++-
T Consensus       111 Vi~~~~l  117 (215)
T 2pxx_A          111 VLEKGTL  117 (215)
T ss_dssp             EEEESHH
T ss_pred             EEECCCH
T ss_conf             9999745


No 85 
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus HB8} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.71  E-value=7e-05  Score=47.76  Aligned_cols=91  Identities=9%  Similarity=-0.042  Sum_probs=68.5

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHH----HHCCCCCCEE
Q ss_conf             3443111114677335656522755466347875000038999999999738980-9980426653----3124798699
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA----PQMITTCDVI  145 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~----~~~~~~~d~v  145 (168)
                      .+.+|+|+|+|.|.-++.+|-.     +..|+.+|.+++.+...++-.+..++++ +++++.+.+.    .....+||+|
T Consensus       209 ~g~~VLDl~~g~G~~s~~~a~~-----~~~V~~vD~s~~al~~a~~n~~~ng~~~~~~~~~D~~~~l~~~~~~~~~fD~V  283 (382)
T 1wxx_A          209 RGERALDVFSYAGGFALHLALG-----FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLV  283 (382)
T ss_dssp             CEEEEEEETCTTTHHHHHHHHH-----EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEECCCCCCHHHHHHHHC-----CCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCEE
T ss_conf             6980410467787799999846-----77267204639999999999997286886678601777777778626799869


Q ss_pred             EECC-------------CCCHHHHHHHHHHHHCC
Q ss_conf             9914-------------79989999984885206
Q gi|254780807|r  146 SARA-------------LADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       146 ~sRA-------------~a~l~~ll~~~~pllk~  166 (168)
                      +.-+             ......++..+.++|++
T Consensus       284 ilDpP~~~~~~~~~~~~~~~y~~l~~~a~~lL~p  317 (382)
T 1wxx_A          284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKE  317 (382)
T ss_dssp             EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEE
T ss_pred             EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             9827211589889999999999999999986798


No 86 
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA; HET: SAH; 2.60A {Thermus thermophilus HB8}
Probab=97.69  E-value=0.00013  Score=46.15  Aligned_cols=101  Identities=18%  Similarity=0.109  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHH
Q ss_conf             99898646356431001234431111146773356565227554663478750000389999999997389809980426
Q gi|254780807|r   53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI  132 (168)
Q Consensus        53 ~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~  132 (168)
                      ..+.++..+.+  -.+++.+.+++|||+|.|..    +..+|..   .|+.+|.+..-   ++.+.+ ..-+...++..+
T Consensus        20 ~~~~~~~~~~~--~~~l~~g~~iLDiGCG~G~~----~~~l~~~---~v~g~D~s~~~---l~~A~~-~~~~~~~~~~~~   86 (211)
T 2gs9_A           20 AYVIAEEERAL--KGLLPPGESLLEVGAGTGYW----LRRLPYP---QKVGVEPSEAM---LAVGRR-RAPEATWVRAWG   86 (211)
T ss_dssp             HHHHHHHHHHH--HTTCCCCSEEEEETCTTCHH----HHHCCCS---EEEEECCCHHH---HHHHHH-HCTTSEEECCCT
T ss_pred             HHHHHHHHHHH--HHHCCCCCEEEEECCCCHHH----HHHCCCC---CEEEEECCHHH---HHHHHH-CCCCCEEEECCH
T ss_conf             78999999999--98579999899989986099----9973768---68998389999---998763-366520343423


Q ss_pred             HHHHHCCCCCCEEEECCCC----CHHHHHHHHHHHHCC
Q ss_conf             6533124798699991479----989999984885206
Q gi|254780807|r  133 QEAPQMITTCDVISARALA----DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       133 e~~~~~~~~~d~v~sRA~a----~l~~ll~~~~pllk~  166 (168)
                      ++++-..+.||+|++..+-    .+...+.-....||+
T Consensus        87 ~~l~~~~~~fD~V~~~~~l~h~~d~~~~l~~i~r~LkP  124 (211)
T 2gs9_A           87 EALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRP  124 (211)
T ss_dssp             TSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEE
T ss_pred             HCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC
T ss_conf             11788756422798754787248999999999998388


No 87 
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold; HET: SAM; 2.00A {Mycobacterium tuberculosis H37RV} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.69  E-value=0.0005  Score=42.83  Aligned_cols=92  Identities=12%  Similarity=0.075  Sum_probs=67.3

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHHHHHCCCCCCEEE
Q ss_conf             123443111114677335656522755466347875000038999999999738980--998042665331247986999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      ++.+.+|+|||+|-|-+.+-+|-..+    ..|+.++-+..-+...++.+.+.++++  .+.....++   ...+||.|+
T Consensus        88 l~~g~rVLDIGCG~G~~a~~~a~~~g----~~v~gi~is~~q~~~a~~~~~~~gl~~~~~~~~~d~~~---~~~~fD~i~  160 (318)
T 2fk8_A           88 LKPGMTLLDIGCGWGTTMRRAVERFD----VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED---FAEPVDRIV  160 (318)
T ss_dssp             CCTTCEEEEESCTTSHHHHHHHHHHC----CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG---CCCCCSEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCHHH---HCCCCCEEE
T ss_conf             99999898978873699999998369----63899989999999999998763874100165410655---037876352


Q ss_pred             ECCCC------CHHHHHHHHHHHHCCC
Q ss_conf             91479------9899999848852067
Q gi|254780807|r  147 ARALA------DLDTLLEYSFPWLYQK  167 (168)
Q Consensus       147 sRA~a------~l~~ll~~~~pllk~k  167 (168)
                      |-.+-      .++.+++-+..+||+-
T Consensus       161 si~~~eh~~~~~~~~~f~~~~r~LkpG  187 (318)
T 2fk8_A          161 SIEAFEHFGHENYDDFFKRCFNIMPAD  187 (318)
T ss_dssp             EESCGGGTCGGGHHHHHHHHHHHSCTT
T ss_pred             EHHHHHHCCCHHHHHHHHHHHHHCCCC
T ss_conf             046888605311899999999763868


No 88 
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum dsm 1728} SCOP: c.66.1.13
Probab=97.68  E-value=8.5e-05  Score=47.26  Aligned_cols=93  Identities=9%  Similarity=-0.006  Sum_probs=66.5

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CC-EEEECHHHHHHHCCCCCCEE
Q ss_conf             123443111114677335656522-7554663478750000389999999997389-80-99804266533124798699
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG-KVFACRIQEAPQMITTCDVI  145 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~-~vi~~r~e~~~~~~~~~d~v  145 (168)
                      +..+.+|+|+|+|.|.-.+.+|=+ .|+   ..|+.+|.++..+...++-.++.+. ++ ++++..+.+... ...||.|
T Consensus       108 i~PG~rVLEiG~GsG~lt~~LA~~v~~~---g~V~~vD~~e~~~~~A~~n~~~~~~~~nV~~~~~Di~e~~~-~~~fD~V  183 (275)
T 1yb2_A          108 LRPGMDILEVGVGSGNMSSYILYALNGK---GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS-DQMYDAV  183 (275)
T ss_dssp             CCTTCEEEEECCTTSHHHHHHHHHHTTS---SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC-SCCEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCCC---CEEEEEECCHHHHHHHHHHHHHHCCCCCCHHEEHHHHHCCC-CCCCCCE
T ss_conf             9997989995771878999999860899---58999908899999999867763156752111011221024-4423305


Q ss_pred             EECCCCCHHHHHHHHHHHHCC
Q ss_conf             991479989999984885206
Q gi|254780807|r  146 SARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       146 ~sRA~a~l~~ll~~~~pllk~  166 (168)
                      +.-.-.|+ ..++.+...||+
T Consensus       184 ~ld~p~p~-~~l~~~~~~LKp  203 (275)
T 1yb2_A          184 IADIPDPW-NHVQKIASMMKP  203 (275)
T ss_dssp             EECCSCGG-GSHHHHHHTEEE
T ss_pred             EEECCCHH-HHHHHHHHHCCC
T ss_conf             87056899-999999975688


No 89 
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, protein structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides 2}
Probab=97.67  E-value=4.3e-05  Score=49.00  Aligned_cols=80  Identities=10%  Similarity=0.021  Sum_probs=59.8

Q ss_pred             HCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEE
Q ss_conf             00123443111114677335656522755466347875000038999999999738980998042665331247986999
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      .-+..+.+|+|||+|.|.-...++-     .+..|+.+|.+..-+...++-....+........++++.+.....||.|+
T Consensus        41 ~~~~pg~~vLdvGcG~G~~~~~l~~-----~g~~v~g~D~S~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~Vv  115 (261)
T 3iv6_A           41 ENIVPGSTVAVIGASTRFLIEKALE-----RGASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVL  115 (261)
T ss_dssp             TTCCTTCEEEEECTTCHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEE
T ss_pred             HCCCCCCEEEEECCCCCHHHHHHHH-----CCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCCEEE
T ss_conf             1799999799988978889999996-----79989997778999999999746405653302122532334578846899


Q ss_pred             ECCCC
Q ss_conf             91479
Q gi|254780807|r  147 ARALA  151 (168)
Q Consensus       147 sRA~a  151 (168)
                      |..+-
T Consensus       116 ~~~~~  120 (261)
T 3iv6_A          116 NDRLI  120 (261)
T ss_dssp             EESCG
T ss_pred             ECCHH
T ss_conf             81378


No 90 
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomics, JCSG, PSI, protein structure initiative; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.66  E-value=0.00016  Score=45.67  Aligned_cols=116  Identities=16%  Similarity=0.061  Sum_probs=78.0

Q ss_pred             EEEECCHHHHHHHHHH---------HHHHHHHC--CCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHH
Q ss_conf             0430899999898646---------35643100--123443111114677335656522-75546634787500003899
Q gi|254780807|r   45 LVSSSTVEDFWIRHVE---------DSLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKAS  112 (168)
Q Consensus        45 Lts~~~~~~~~~rHi~---------DSl~~~~~--~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~  112 (168)
                      .+-+-+.+++. .++-         |+..++..  +..+.+++|+|+|.|.-.+.+|=. .|+   +.|+.+|.++..+.
T Consensus        76 ~v~~pt~~d~~-~~~~r~~qiiypkD~~~Ii~~ldi~pG~~VLDiG~GsG~lt~~lA~~v~~~---g~V~~~D~~~~~~~  151 (277)
T 1o54_A           76 YILIPSLIDEI-MNMKRRTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSS---GKVFAYEKREEFAK  151 (277)
T ss_dssp             EEECCCHHHHH-HTCCC-CCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTT---CEEEEECCCHHHHH
T ss_pred             EEECCCHHHHH-HCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCC---EEEEEEECCHHHHH
T ss_conf             99679989999-518888622688999999998089999989976888279999999851898---09999968899999


Q ss_pred             HHHHHHHHHCC-CC-EEEECHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             99999997389-80-99804266533124798699991479989999984885206
Q gi|254780807|r  113 FLRYVVQKTAA-RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       113 FL~~~~~~L~L-~~-~vi~~r~e~~~~~~~~~d~v~sRA~a~l~~ll~~~~pllk~  166 (168)
                      ..++-.++.++ ++ ++.+..+.+... ...||.|+.-.-. +...++.+...||+
T Consensus       152 ~A~~n~~~~gl~~~v~~~~~D~~~~~~-~~~~D~V~ld~p~-p~~~l~~~~~~LKp  205 (277)
T 1o54_A          152 LAESNLTKWGLIERVTIKVRDISEGFD-EKDVDALFLDVPD-PWNYIDKCWEALKG  205 (277)
T ss_dssp             HHHHHHHHTTCGGGEEEECCCGGGCCS-CCSEEEEEECCSC-GGGTHHHHHHHEEE
T ss_pred             HHHHHHHHCCCCCCEEEEECCCCCCCC-CCCCCEEECCCCC-HHHHHHHHHHHCCC
T ss_conf             999989974998767999686224444-4454102217899-89999999973589


No 91 
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics, protein structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.66  E-value=0.00014  Score=46.02  Aligned_cols=80  Identities=9%  Similarity=-0.026  Sum_probs=59.3

Q ss_pred             HHHCCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CC-EEEECHHHHHHHC-CC
Q ss_conf             3100123443111114677335656522-7554663478750000389999999997389-80-9980426653312-47
Q gi|254780807|r   65 VFQLHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG-KVFACRIQEAPQM-IT  140 (168)
Q Consensus        65 ~~~~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~-~vi~~r~e~~~~~-~~  140 (168)
                      +..+++++.+|+|+|+|.|--++.+|=. .|.   .+|+.+|-+++.+.-.++-..+++. ++ +++++..++++.. ..
T Consensus        16 l~~~ik~G~~VLDlGcG~G~~t~~la~~~~~~---~~V~giDis~~~l~~ar~~~~~~g~~~~v~~~~~d~~~~~~~~~~   92 (197)
T 3eey_A           16 IKMFVKEGDTVVDATCGNGNDTAFLASLVGEN---GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDC   92 (197)
T ss_dssp             HHHHCCTTCEEEESCCTTSHHHHHHHHHHCTT---CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCS
T ss_pred             HHHHCCCCCEEEEEEEECCHHHHHHHHHHCCC---EEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCC
T ss_conf             99858999999999204889999999983898---199999738899899999999839987789998586760121577


Q ss_pred             CCCEEEE
Q ss_conf             9869999
Q gi|254780807|r  141 TCDVISA  147 (168)
Q Consensus       141 ~~d~v~s  147 (168)
                      .+|.++.
T Consensus        93 ~~~~~~~   99 (197)
T 3eey_A           93 PVKAVMF   99 (197)
T ss_dssp             CEEEEEE
T ss_pred             CCCEEEE
T ss_conf             6430465


No 92 
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.60  E-value=0.00048  Score=42.91  Aligned_cols=96  Identities=19%  Similarity=0.190  Sum_probs=73.1

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHH-HH----HCCCCC
Q ss_conf             23443111114677335656522755466347875000038999999999738980--998042665-33----124798
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQE-AP----QMITTC  142 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~-~~----~~~~~~  142 (168)
                      .++++|++||||.|+=.+-+|-..|+-  ++++.+|.....+...++...+.++..  ..+.+...+ ++    +...+|
T Consensus        57 ~~pk~ILEiGt~~G~St~~la~al~~~--g~i~tie~~~~~~~~a~~~~~~~g~~~~i~~~~~~~~d~l~~L~~~~~~~f  134 (223)
T 3duw_A           57 QGARNILEIGTLGGYSTIWLARGLSSG--GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPF  134 (223)
T ss_dssp             HTCSEEEEECCTTSHHHHHHHTTCCSS--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred             HCCCEEEEEECCCCHHHHHHHHHCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCE
T ss_conf             499889998344278999999748888--859999448888999999999849976466873452367777650578766


Q ss_pred             CEEEECCC-CCHHHHHHHHHHHHCCC
Q ss_conf             69999147-99899999848852067
Q gi|254780807|r  143 DVISARAL-ADLDTLLEYSFPWLYQK  167 (168)
Q Consensus       143 d~v~sRA~-a~l~~ll~~~~pllk~k  167 (168)
                      |+|..-|- ......++.+.++|++-
T Consensus       135 D~ifiD~~~~~~~~~~~~~~~lLrpG  160 (223)
T 3duw_A          135 DFIFIDADKQNNPAYFEWALKLSRPG  160 (223)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHTCCTT
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCCC
T ss_conf             59999657466899999998225899


No 93 
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, PSI, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.60  E-value=0.00027  Score=44.40  Aligned_cols=92  Identities=15%  Similarity=0.072  Sum_probs=65.7

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHH---CCCC-EEEECHHHHHHHCCCCCCE
Q ss_conf             23443111114677335656522-75546634787500003899999999973---8980-9980426653312479869
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKT---AARG-KVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L---~L~~-~vi~~r~e~~~~~~~~~d~  144 (168)
                      ..+.+|+|+|||.|.-.+.||=+ .|+   ++|+.+|.+++.+...++-.+..   ..+| .++++.+.+..-....||.
T Consensus        98 ~PG~~VLE~GtGsG~lT~~LAr~vgp~---G~V~t~D~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~~~fD~  174 (280)
T 1i9g_A           98 FPGARVLEAGAGSGALTLSLLRAVGPA---GQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDR  174 (280)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHCTT---SEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEE
T ss_pred             CCCCEEEEEEECCHHHHHHHHHHHCCC---EEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCE
T ss_conf             999989992276159999999974998---59999958999999999855543157886299995551225566788786


Q ss_pred             EEECCCCCHHHHHHHHHHHHC
Q ss_conf             999147998999998488520
Q gi|254780807|r  145 ISARALADLDTLLEYSFPWLY  165 (168)
Q Consensus       145 v~sRA~a~l~~ll~~~~pllk  165 (168)
                      |+.-.-.|+..+- -+.+.||
T Consensus       175 VflDlp~P~~~l~-~~~~~Lk  194 (280)
T 1i9g_A          175 AVLDMLAPWEVLD-AVSRLLV  194 (280)
T ss_dssp             EEEESSCGGGGHH-HHHHHEE
T ss_pred             EEECCCCHHHHHH-HHHHHCC
T ss_conf             8972788899999-9998447


No 94 
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.59  E-value=0.00034  Score=43.80  Aligned_cols=95  Identities=14%  Similarity=0.152  Sum_probs=76.1

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHH-HHHC-----CCC
Q ss_conf             2344311111467733565652275546634787500003899999999973898--0998042665-3312-----479
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQE-APQM-----ITT  141 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~-~~~~-----~~~  141 (168)
                      .+.++++.|||+.|+-++-+|-..|.  .+.++.+|...++...-+...++.|+.  .+++.+.+-+ ++..     ..+
T Consensus        71 ~~ak~iLEiGT~~GyStl~lA~al~~--~g~v~tiE~~~~~~~~A~~~~~~ag~~~~i~~~~g~a~e~l~~l~~~~~~~~  148 (232)
T 3cbg_A           71 TGAKQVLEIGVFRGYSALAMALQLPP--DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPE  148 (232)
T ss_dssp             HTCCEEEEECCTTSHHHHHHHTTSCT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred             HCCCEEEEEECCCCHHHHHHHHHCCC--CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCC
T ss_conf             49978999843438999999985899--8589999767414899999999869986289996258999999973256776


Q ss_pred             CCEEEECCCC-CHHHHHHHHHHHHCC
Q ss_conf             8699991479-989999984885206
Q gi|254780807|r  142 CDVISARALA-DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       142 ~d~v~sRA~a-~l~~ll~~~~pllk~  166 (168)
                      ||+|..-|-. .....++++.|+|++
T Consensus       149 fD~iFiDadK~~y~~y~~~~~~lLr~  174 (232)
T 3cbg_A          149 FDLIFIDADKRNYPRYYEIGLNLLRR  174 (232)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHTEEE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf             01899608888899999999998367


No 95 
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.55  E-value=0.00029  Score=44.21  Aligned_cols=81  Identities=17%  Similarity=0.019  Sum_probs=58.9

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-----C-CEEEECHHHHHHHCCC
Q ss_conf             0123443111114677335656522-7554663478750000389999999997389-----8-0998042665331247
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAA-----R-GKVFACRIQEAPQMIT  140 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-----~-~~vi~~r~e~~~~~~~  140 (168)
                      .++++.+|+|||||.|+-...+|-+ -|.   ..|+.+|....-+.+.++..++.++     . ..++.+...+......
T Consensus        74 ~~~pg~~VLdiG~GsGy~ta~la~lvg~~---g~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gd~~~~~~~~~  150 (226)
T 1i1n_A           74 QLHEGAKALDVGSGSGILTACFARMVGCT---GKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEA  150 (226)
T ss_dssp             TSCTTCEEEEETCTTSHHHHHHHHHHCTT---CEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGC
T ss_pred             HCCCCCEEEEECCCCCHHHHHHHHHCCCC---CEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCC
T ss_conf             08999989997788899999999970888---649998688999999999986548643102346799656456665567


Q ss_pred             CCCEEEECCCC
Q ss_conf             98699991479
Q gi|254780807|r  141 TCDVISARALA  151 (168)
Q Consensus       141 ~~d~v~sRA~a  151 (168)
                      +||.|..-|-.
T Consensus       151 ~fD~I~~~~~~  161 (226)
T 1i1n_A          151 PYDAIHVGAAA  161 (226)
T ss_dssp             CEEEEEECSBB
T ss_pred             CEEEEEECCCH
T ss_conf             60168752677


No 96 
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S- adenosylmethionine-dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.54  E-value=0.00057  Score=42.51  Aligned_cols=92  Identities=16%  Similarity=0.050  Sum_probs=70.3

Q ss_pred             CCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHC--CCCCCEEEEC
Q ss_conf             443111114677335656522755466347875000038999999999738980-9980426653312--4798699991
Q gi|254780807|r   72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM--ITTCDVISAR  148 (168)
Q Consensus        72 ~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~--~~~~d~v~sR  148 (168)
                      ...++|||+|.|-=.+-+|-.+|+..   ++.+|.+.+.+.....-+.+.+++| .++++.++++.+.  ...+|.|..-
T Consensus        42 ~p~iLEIGcG~G~~~~~lA~~~P~~~---~igiD~~~~~v~~a~~~~~~~~l~Nv~~~~~da~~l~~~~~~~~~d~v~~~  118 (214)
T 1yzh_A           42 NPIHVEVGSGKGAFVSGMAKQNPDIN---YIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLN  118 (214)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHCTTSE---EEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred             CCCEEEEEEECCHHHHHHHHHCCCCC---EEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCEEEEEECC
T ss_conf             97189994108699999999789997---797407788899999999983998644552369887421257743111124


Q ss_pred             CCCCH------------HHHHHHHHHHHCC
Q ss_conf             47998------------9999984885206
Q gi|254780807|r  149 ALADL------------DTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a~l------------~~ll~~~~pllk~  166 (168)
                      ---|+            +.+++.....||+
T Consensus       119 fPdPwpK~rh~krRli~~~fl~~~~r~Lkp  148 (214)
T 1yzh_A          119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPE  148 (214)
T ss_dssp             SCCCCCSGGGGGGSTTSHHHHHHHHHHSCT
T ss_pred             CCCCCCHHHHHHHHHCCHHHHHHHHHHCCC
T ss_conf             678662011131553107899999997488


No 97 
>1vlm_A SAM-dependent methyltransferase; possible histamine N-methyltransferase, structural genomics, JCSG, protein structure initiative, PSI; 2.20A {Thermotoga maritima MSB8} SCOP: c.66.1.41
Probab=97.54  E-value=0.0004  Score=43.37  Aligned_cols=82  Identities=15%  Similarity=0.109  Sum_probs=55.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECC
Q ss_conf             23443111114677335656522755466347875000038999999999738980998042665331247986999914
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA  149 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA  149 (168)
                      ..+++++|+|+|.|.-..+++         .++.+|.++.-+...++   +   +...+++.+++++-..++||+|++..
T Consensus        46 ~~~~~vLDiGcGtG~~~~~l~---------~~~giD~s~~~i~~a~~---~---~i~~~~~d~~~l~~~~~sfD~V~~~~  110 (219)
T 1vlm_A           46 LPEGRGVEIGVGTGRFAVPLK---------IKIGVEPSERMAEIARK---R---GVFVLKGTAENLPLKDESFDFALMVT  110 (219)
T ss_dssp             CCSSCEEEETCTTSTTHHHHT---------CCEEEESCHHHHHHHHH---T---TCEEEECBTTBCCSCTTCEEEEEEES
T ss_pred             CCCCEEEEECCCCCHHHHHHH---------HEEEEECCHHHHHHHHH---C---CCEEEECCHHHCCCCCCCCCEECCCC
T ss_conf             899909998586779999775---------86999499999999998---6---99899877787899878733203132


Q ss_pred             CC----CHHHHHHHHHHHHCC
Q ss_conf             79----989999984885206
Q gi|254780807|r  150 LA----DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       150 ~a----~l~~ll~~~~pllk~  166 (168)
                      +-    .+..+++=....||+
T Consensus       111 vl~~~~d~~~~l~e~~r~Lkp  131 (219)
T 1vlm_A          111 TICFVDDPERALKEAYRILKK  131 (219)
T ss_dssp             CGGGSSCHHHHHHHHHHHEEE
T ss_pred             CHHHHCCHHHHHHHHHHHCCC
T ss_conf             015534899999999998586


No 98 
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} SCOP: c.66.1.16 PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.54  E-value=0.00026  Score=44.49  Aligned_cols=93  Identities=11%  Similarity=-0.002  Sum_probs=62.8

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHH--HHCCCCCCEEEE
Q ss_conf             234431111146773356565227554663478750000389999999997389809980426653--312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~--~~~~~~~d~v~s  147 (168)
                      ..+.+|+|||+|.|.-..-++=..|    ..++.||.++.-+...++-....+.++.++..++++.  ......||.|..
T Consensus        59 ~~g~rVLeiG~G~G~~a~~la~~~~----~~vt~id~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~~  134 (236)
T 1zx0_A           59 SKGGRVLEVGFGMAIAASKVQEAPI----DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY  134 (236)
T ss_dssp             TTCEEEEEECCTTSHHHHHHHTSCE----EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHHCCC----CEEEEEECCHHHHHHHHHHHHHCCCCCCEEECHHHHHHCCCCCCCCCCEEE
T ss_conf             4898499988885099999997299----779998089899999999887558862023200887620122356674452


Q ss_pred             CCCC---------CHHHHHHHHHHHHCC
Q ss_conf             1479---------989999984885206
Q gi|254780807|r  148 RALA---------DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA~a---------~l~~ll~~~~pllk~  166 (168)
                      =++.         ....+++-..++||+
T Consensus       135 D~~~~~~~~~~~~~~~~~~~~~~RvLkP  162 (236)
T 1zx0_A          135 DTYPLSEETWHTHQFNFIKNHAFRLLKP  162 (236)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred             CCEEECCCEECCCCHHHHHHHHHHEECC
T ss_conf             1162012201023468888998620678


No 99 
>3ege_A Putative methyltransferase from antibiotic biosynthesis pathway; YP_324569.1, structural genomics; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.54  E-value=0.00029  Score=44.22  Aligned_cols=98  Identities=13%  Similarity=0.100  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHH
Q ss_conf             89864635643100123443111114677335656522755466347875000038999999999738980998042665
Q gi|254780807|r   55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE  134 (168)
Q Consensus        55 ~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~  134 (168)
                      +.+.+++.+.    .+.+.+|+|||+|.|.-...|+=     .+..|+.+|.+..-+..   +  +-.-+.+++.+.+++
T Consensus        22 ~~~~~~~~l~----l~~~~~vLDvGcG~G~~~~~l~~-----~~~~v~gvD~s~~~~~~---a--~~~~~~~~~~~d~~~   87 (261)
T 3ege_A           22 IVNAIINLLN----LPKGSVIADIGAGTGGYSVALAN-----QGLFVYAVEPSIVMRQQ---A--VVHPQVEWFTGYAEN   87 (261)
T ss_dssp             HHHHHHHHHC----CCTTCEEEEETCTTSHHHHHHHT-----TTCEEEEECSCHHHHHS---S--CCCTTEEEECCCTTS
T ss_pred             HHHHHHHHCC----CCCCCEEEEECCCCCHHHHHHHH-----CCCEEEEEECCCCCCCC---C--CCCCCHHHHHHHHHH
T ss_conf             9999999659----99969999964888899999997-----69989999744531210---0--012210133344543


Q ss_pred             HHHCCCCCCEEEECCC----CCHHHHHHHHHHHHCC
Q ss_conf             3312479869999147----9989999984885206
Q gi|254780807|r  135 APQMITTCDVISARAL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       135 ~~~~~~~~d~v~sRA~----a~l~~ll~~~~pllk~  166 (168)
                      ++-....||+|++..+    ..+...+.-....||+
T Consensus        88 l~~~~~~fD~v~~~~~l~~~~d~~~~l~e~~r~Lkp  123 (261)
T 3ege_A           88 LALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIRD  123 (261)
T ss_dssp             CCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBCS
T ss_pred             CCCCCCCCCEEEECCHHHHCCCHHHHHHHHHHHCCC
T ss_conf             025676013775401277468999999999998281


No 100
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} PDB: 1kpi_A*
Probab=97.54  E-value=0.00064  Score=42.22  Aligned_cols=92  Identities=13%  Similarity=0.057  Sum_probs=68.0

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHHHHHCCCCCCEEE
Q ss_conf             123443111114677335656522755466347875000038999999999738980--998042665331247986999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      +..+.+|+|||+|=|=|.+=+|--++    ..|+.++.+..-+.+.++-+++.++..  .+.....   ....++||.|+
T Consensus        70 l~~g~rVLDiGCGwG~~a~~~a~~~g----~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~~~~~d~---~~~~~~fD~iv  142 (302)
T 3hem_A           70 LEPGMTLLDIGCGWGSTMRHAVAEYD----VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW---EEFDEPVDRIV  142 (302)
T ss_dssp             CCTTCEEEEETCTTSHHHHHHHHHHC----CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCG---GGCCCCCSEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCC----CEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCC---CCCCCCCCEEE
T ss_conf             99989898857885399999999869----838998377889999999998740021233444043---23478867553


Q ss_pred             ECC----CCC---------HHHHHHHHHHHHCCC
Q ss_conf             914----799---------899999848852067
Q gi|254780807|r  147 ARA----LAD---------LDTLLEYSFPWLYQK  167 (168)
Q Consensus       147 sRA----~a~---------l~~ll~~~~pllk~k  167 (168)
                      |--    |.+         +..+++-+..+||+.
T Consensus       143 Sie~~EHv~~~~~~~~~~~~~~~f~~i~~~LkPg  176 (302)
T 3hem_A          143 SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD  176 (302)
T ss_dssp             EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT
T ss_pred             EEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
T ss_conf             1156887312210126889999999999856998


No 101
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=97.54  E-value=9.1e-05  Score=47.10  Aligned_cols=95  Identities=9%  Similarity=-0.028  Sum_probs=65.2

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHHHHHCCCCCCE
Q ss_conf             0123443111114677335656522-755466347875000038999999999738980--9980426653312479869
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~~~~~~~~~d~  144 (168)
                      .++.+.+|+|||+|.|-..+.|+-. .|+.   +|+.+|.+..-+...+.-+...++.+  ..+++.+++++. ...||.
T Consensus       115 ~l~~g~~vLDvGcG~G~~~~~l~~~~~p~~---~v~gvD~S~~~l~~A~~~~~~~~l~~~~~~~~~d~~~l~~-~~~~d~  190 (305)
T 3ocj_A          115 HLRPGCVVASVPCGWMSELLALDYSACPGV---QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT-REGYDL  190 (305)
T ss_dssp             HCCTTCEEEETTCTTCHHHHTSCCTTCTTC---EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC-CSCEEE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC-CCCCCE
T ss_conf             099959999944747699999999718995---8999979888999997530220123222332000887424-664017


Q ss_pred             EEECCCC----CH---HHHHHHHHHHHCC
Q ss_conf             9991479----98---9999984885206
Q gi|254780807|r  145 ISARALA----DL---DTLLEYSFPWLYQ  166 (168)
Q Consensus       145 v~sRA~a----~l---~~ll~~~~pllk~  166 (168)
                      |++-.+.    +.   ..++.-....||+
T Consensus       191 iv~~~~~~~~~~~~~~~~~l~~~~~~Lkp  219 (305)
T 3ocj_A          191 LTSNGLNIYEPDDARVTELYRRFWQALKP  219 (305)
T ss_dssp             EECCSSGGGCCCHHHHHHHHHHHHHHEEE
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             99813421378466667789999854488


No 102
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.51  E-value=0.00041  Score=43.34  Aligned_cols=93  Identities=13%  Similarity=-0.002  Sum_probs=66.8

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-C-EEEECHHHHHHHCCCCCCEE
Q ss_conf             123443111114677335656522-75546634787500003899999999973898-0-99804266533124798699
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G-KVFACRIQEAPQMITTCDVI  145 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~-~vi~~r~e~~~~~~~~~d~v  145 (168)
                      +..+.+++|+|+|.|.-.+.+|=. .|+   ++|+.+|.++..+...++-.+..++. + ++....+.+.. ....||.|
T Consensus        91 i~pG~rVLd~G~GsG~lt~~lar~~~~~---G~V~~~D~~~~~~~~A~~n~~~~gl~~~v~~~~~D~~~~~-~~~~~D~V  166 (255)
T 3mb5_A           91 ISPGDFIVEAGVGSGALTLFLANIVGPE---GRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI-EEENVDHV  166 (255)
T ss_dssp             CCTTCEEEEECCTTSHHHHHHHHHHCTT---SEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC-CCCSEEEE
T ss_pred             CCCCCEEEECCCCCHHHHHHHHHHCCCC---CEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCHHCCC-CCCCCCEE
T ss_conf             8989989988866279999999743889---7799834999999999999997199814999946110355-55656579


Q ss_pred             EECCCCCHHHHHHHHHHHHCC
Q ss_conf             991479989999984885206
Q gi|254780807|r  146 SARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       146 ~sRA~a~l~~ll~~~~pllk~  166 (168)
                      +.-.-.|+ ..++-+.+.||+
T Consensus       167 ~ld~p~p~-~~l~~~~~~Lkp  186 (255)
T 3mb5_A          167 ILDLPQPE-RVVEHAAKALKP  186 (255)
T ss_dssp             EECSSCGG-GGHHHHHHHEEE
T ss_pred             EEECCCHH-HHHHHHHHHCCC
T ss_conf             99668567-899999985689


No 103
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.51  E-value=0.00023  Score=44.80  Aligned_cols=76  Identities=11%  Similarity=-0.029  Sum_probs=58.2

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECC
Q ss_conf             23443111114677335656522755466347875000038999999999738980998042665331247986999914
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA  149 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA  149 (168)
                      ..+.+|+|+|+|.|.=.++++   |   +..|+.+|-+..-+.+.+......++++......+.+.+. ..+||+|++-.
T Consensus       104 ~~~~~VLDlGCG~G~l~~~~~---~---~~~v~gvD~s~~~l~~ar~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~  176 (253)
T 3frh_A          104 ETPRRVLDIACGLNPLALYER---G---IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP-AEAGDLALIFK  176 (253)
T ss_dssp             CCCSEEEEETCTTTHHHHHHT---T---CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC-CCBCSEEEEES
T ss_pred             CCCCEEEEECCCCCHHHHHHC---C---CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCHHHCCC-CCCCCHHHHHC
T ss_conf             999859996788889999976---8---9838999797999999999999829970488556222457-76744105424


Q ss_pred             CCC
Q ss_conf             799
Q gi|254780807|r  150 LAD  152 (168)
Q Consensus       150 ~a~  152 (168)
                      +-.
T Consensus       177 vl~  179 (253)
T 3frh_A          177 LLP  179 (253)
T ss_dssp             CHH
T ss_pred             HHH
T ss_conf             486


No 104
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, coiled coil, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus dsm 4304} SCOP: c.66.1.3
Probab=97.45  E-value=0.00057  Score=42.50  Aligned_cols=93  Identities=14%  Similarity=0.099  Sum_probs=61.1

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHH---HHHCCCCCCEE
Q ss_conf             123443111114677335656522755466347875000038999999999738980998042665---33124798699
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE---APQMITTCDVI  145 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~---~~~~~~~~d~v  145 (168)
                      ++.+.+|+|+|+|.|.....+|=..++   +.|+.||.++..+..+++.+.+.+. ...+...+..   .+.....+|++
T Consensus        55 ikpg~~VLDlG~GtG~~~~~la~~~~~---g~V~avD~s~~~i~~a~~~a~~~~n-~~~i~~~~~~~~~~~~~~~~v~~i  130 (210)
T 1nt2_A           55 LRGDERVLYLGAASGTTVSHLADIVDE---GIIYAVEYSAKPFEKLLELVRERNN-IIPLLFDASKPWKYSGIVEKVDLI  130 (210)
T ss_dssp             CCSSCEEEEETCTTSHHHHHHHHHTTT---SEEEEECCCHHHHHHHHHHHHHCSS-EEEECSCTTCGGGTTTTCCCEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHHCCC-EEEEEECCCCCCCCCCCCCEEEEE
T ss_conf             899899999568888889999974369---8599996999999999977864897-079994056741122433213588


Q ss_pred             EECCCCC---HHHHHHHHHHHHCC
Q ss_conf             9914799---89999984885206
Q gi|254780807|r  146 SARALAD---LDTLLEYSFPWLYQ  166 (168)
Q Consensus       146 ~sRA~a~---l~~ll~~~~pllk~  166 (168)
                      .+ .++-   ...++.-+.++||+
T Consensus       131 ~~-~~~~~~~~~~~l~~~~~~LKp  153 (210)
T 1nt2_A          131 YQ-DIAQKNQIEILKANAEFFLKE  153 (210)
T ss_dssp             EE-CCCSTTHHHHHHHHHHHHEEE
T ss_pred             EE-ECCCHHHHHHHHHHHHHHHCC
T ss_conf             72-023615689999999985158


No 105
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.45  E-value=0.00044  Score=43.16  Aligned_cols=87  Identities=18%  Similarity=0.168  Sum_probs=58.4

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECCC
Q ss_conf             34431111146773356565227554663478750000389999999997389809980426653312479869999147
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL  150 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA~  150 (168)
                      .+++|+|||+|.|.-...++=..     ..++.+|.++.-+.+.+   ++++-+..++++.+++... .++||+|++..+
T Consensus        42 ~~~~VLDiGCG~G~~~~~l~~~~-----~~v~giD~s~~~l~~a~---~~~~~~~~~~~~~~~~~~~-~~~fD~I~~~~v  112 (250)
T 2p7i_A           42 RPGNLLELGSFKGDFTSRLQEHF-----NDITCVEASEEAISHAQ---GRLKDGITYIHSRFEDAQL-PRRYDNIVLTHV  112 (250)
T ss_dssp             CSSCEEEESCTTSHHHHHHTTTC-----SCEEEEESCHHHHHHHH---HHSCSCEEEEESCGGGCCC-SSCEEEEEEESC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHC-----CEEEEEECCHHHHHHHH---HHHHCCCCEEECCHHHCCC-CCCCCHHHHHHH
T ss_conf             99939999289879999999509-----97999967168888999---8630354202022221266-556657886424


Q ss_pred             C----CHHHHHH-HHHHHHCC
Q ss_conf             9----9899999-84885206
Q gi|254780807|r  151 A----DLDTLLE-YSFPWLYQ  166 (168)
Q Consensus       151 a----~l~~ll~-~~~pllk~  166 (168)
                      -    .+..+++ +...+|++
T Consensus       113 leh~~dp~~~L~~i~~~~Lk~  133 (250)
T 2p7i_A          113 LEHIDDPVALLKRINDDWLAE  133 (250)
T ss_dssp             GGGCSSHHHHHHHHHHTTEEE
T ss_pred             HHHCCCHHHHHHHHHHHHCCC
T ss_conf             640689999999999960299


No 106
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.43  E-value=0.00034  Score=43.77  Aligned_cols=91  Identities=11%  Similarity=-0.046  Sum_probs=58.1

Q ss_pred             CEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
Q ss_conf             30430899999898646356431001234431111146773356565227554663478750000389999999997389
Q gi|254780807|r   44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA  123 (168)
Q Consensus        44 NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L  123 (168)
                      .|=-..|+.++-.+ ++.-+....-+ .+++|+|+|+|.|.=|+.++..-+    .+|+.+|....-+.-.++    .--
T Consensus        26 ~leQY~t~~~iaa~-~~~~~~~~gd~-~Gk~VLDlGcGtG~l~i~a~~~ga----~~V~~vDid~~a~~~a~~----N~~   95 (200)
T 1ne2_A           26 YLEQYPTDASTAAY-FLIEIYNDGNI-GGRSVIDAGTGNGILACGSYLLGA----ESVTAFDIDPDAIETAKR----NCG   95 (200)
T ss_dssp             ----CCCCHHHHHH-HHHHHHHHTSS-BTSEEEEETCTTCHHHHHHHHTTB----SEEEEEESCHHHHHHHHH----HCT
T ss_pred             CCCCCCCCHHHHHH-HHHHHHHCCCC-CCCEEEECCCCHHHHHHHHHHCCC----CEEEEEECCHHHHHHHHH----HHH
T ss_conf             71007998899999-99999866998-939899875751099999996799----879675089999999999----898


Q ss_pred             CCEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             809980426653312479869999
Q gi|254780807|r  124 RGKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus       124 ~~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      +++++++++++++   .+||+|++
T Consensus        96 ~~~~~~~d~~~~~---~~fD~Vi~  116 (200)
T 1ne2_A           96 GVNFMVADVSEIS---GKYDTWIM  116 (200)
T ss_dssp             TSEEEECCGGGCC---CCEEEEEE
T ss_pred             HCCCEEEEHHHCC---CCCCEEEE
T ss_conf             5785376521057---75488987


No 107
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.43  E-value=0.00039  Score=43.48  Aligned_cols=94  Identities=14%  Similarity=0.015  Sum_probs=58.1

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHC-CCCCCEEEE
Q ss_conf             1234431111146773356565227554663478750000389999999997389809980426653312-479869999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM-ITTCDVISA  147 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~-~~~~d~v~s  147 (168)
                      ++.+.+|+|+|+|.|....-+|=..|+   +.|+.||.++.-+..+++.+++.+. ...+...+...... ...+++.++
T Consensus        72 ikpg~~VLDlGcGtG~~~~~la~~~~~---G~V~aVDiSp~mi~~a~~~a~~~~n-i~~i~~d~~~~~~~~~~~~~vd~i  147 (230)
T 1fbn_A           72 IKRDSKILYLGASAGTTPSHVADIADK---GIVYAIEYAPRIMRELLDACAEREN-IIPILGDANKPQEYANIVEKVDVI  147 (230)
T ss_dssp             CCTTCEEEEESCCSSHHHHHHHHHTTT---SEEEEEESCHHHHHHHHHHTTTCTT-EEEEECCTTCGGGGTTTSCCEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCCCCCEEEEE
T ss_conf             799999999679779899999975899---6599997998999999987764487-317984135864235666359999


Q ss_pred             CC-CC---CHHHHHHHHHHHHCC
Q ss_conf             14-79---989999984885206
Q gi|254780807|r  148 RA-LA---DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA-~a---~l~~ll~~~~pllk~  166 (168)
                      -+ +.   ....++.-+..+||+
T Consensus       148 ~~~~~~~~~~~~~l~~~~~~LKp  170 (230)
T 1fbn_A          148 YEDVAQPNQAEILIKNAKWFLKK  170 (230)
T ss_dssp             EECCCSTTHHHHHHHHHHHHEEE
T ss_pred             EEECCCHHHHHHHHHHHHHHCCC
T ss_conf             71012427899999998864589


No 108
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.43  E-value=0.001  Score=41.08  Aligned_cols=95  Identities=14%  Similarity=0.135  Sum_probs=62.4

Q ss_pred             CCCCCEEECCCCCHHHHHHHHC----CCCCCCCEEEEEHHHHHHHHHHHHHHHHHC-CCC---EEEECHHHHH------H
Q ss_conf             3443111114677335656522----755466347875000038999999999738-980---9980426653------3
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQ----LSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARG---KVFACRIQEA------P  136 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~----~p~~~~~~v~Lves~~KK~~FL~~~~~~L~-L~~---~vi~~r~e~~------~  136 (168)
                      .+.+|+|||+|.|.-..+++=.    +|.. ...++.||.+..-+...++...... +++   ......+|+.      +
T Consensus        52 ~~~~VLdiGcG~G~~~~~il~~l~~~~~~~-~~~~~~vD~s~~~l~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (292)
T 2aot_A           52 SEIKILSIGGGAGEIDLQILSKVQAQYPGV-CINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK  130 (292)
T ss_dssp             SEEEEEEETCTTSHHHHHHHHHHHHHSTTC-EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHCCCC-CCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCHHHCC
T ss_conf             998699987979977899999888744787-7759999898899999999988741335530110235165404422155


Q ss_pred             HCCCCCCEEEECCC----CCHHHHHHHHHHHHCC
Q ss_conf             12479869999147----9989999984885206
Q gi|254780807|r  137 QMITTCDVISARAL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       137 ~~~~~~d~v~sRA~----a~l~~ll~~~~pllk~  166 (168)
                      ....+||+|+|..+    .++...+.-...+|++
T Consensus       131 ~~~~~fD~I~~~~~l~~~~d~~~~l~~~~~~Lkp  164 (292)
T 2aot_A          131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGT  164 (292)
T ss_dssp             TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEE
T ss_pred             CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             6789867999768044310399999999997087


No 109
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly, inter-subunit disulfide bridge; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.42  E-value=0.00029  Score=44.22  Aligned_cols=77  Identities=13%  Similarity=0.053  Sum_probs=53.8

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             12344311111467733565652275546634787500003899999999973898099804266533124798699991
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      +..+.+++|||||.|+-...+|-+-     .+|+.+|....-+.+.++..... -+++++++..........+||.|+.-
T Consensus        68 l~~g~~VLeIG~GsGy~ta~La~l~-----~~V~~vE~~~~~~~~A~~~~~~~-~nv~~~~gDg~~g~~~~~pfD~Iiv~  141 (231)
T 1vbf_A           68 LHKGQKVLEIGTGIGYYTALIAEIV-----DKVVSVEINEKMYNYASKLLSYY-NNIKLILGDGTLGYEEEKPYDRVVVW  141 (231)
T ss_dssp             CCTTCEEEEECCTTSHHHHHHHHHS-----SEEEEEESCHHHHHHHHHHHTTC-SSEEEEESCGGGCCGGGCCEEEEEES
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHC-----CEEEEECCCHHHHHHHHHHHCCC-CEEEEEECCHHCCCCCCCCEEEEEEC
T ss_conf             9997989997798778899999856-----78767628999999999874068-62689866320287346985799985


Q ss_pred             CCC
Q ss_conf             479
Q gi|254780807|r  149 ALA  151 (168)
Q Consensus       149 A~a  151 (168)
                      |..
T Consensus       142 ~~~  144 (231)
T 1vbf_A          142 ATA  144 (231)
T ss_dssp             SBB
T ss_pred             CCH
T ss_conf             757


No 110
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.42  E-value=0.00043  Score=43.18  Aligned_cols=96  Identities=9%  Similarity=-0.043  Sum_probs=66.9

Q ss_pred             HCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHH----HHCCC
Q ss_conf             0012344311111467733565652275546634787500003899999999973898--09980426653----31247
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEA----PQMIT  140 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~----~~~~~  140 (168)
                      .++..+.+++|+|+|.|--++.+|-.    ...+|+.+|.++..+...++-.+..+++  ..++.+.+.+.    .....
T Consensus       213 ~~~~~g~~VLDl~~g~G~~si~aa~~----ga~~V~~vD~s~~al~~a~~N~~~Ngl~~~~~~~~~D~~~~l~~~~~~~~  288 (396)
T 2as0_A          213 KWVQPGDRVLDVFTYTGGFAIHAAIA----GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGE  288 (396)
T ss_dssp             GGCCTTCEEEETTCTTTHHHHHHHHT----TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTC
T ss_pred             HHCCCCCEEEEECCCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCC
T ss_conf             75158976988178778889999977----99746887188889999999999839974556996629888788886078


Q ss_pred             CCCEEEECC--CCC-----------HHHHHHHHHHHHCC
Q ss_conf             986999914--799-----------89999984885206
Q gi|254780807|r  141 TCDVISARA--LAD-----------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       141 ~~d~v~sRA--~a~-----------l~~ll~~~~pllk~  166 (168)
                      +||+|++-.  |++           ...++..+.++|++
T Consensus       289 ~FD~Ii~DpP~~~~~~~~~~~~~~~y~~l~~~a~~lLkp  327 (396)
T 2as0_A          289 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKD  327 (396)
T ss_dssp             CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEE
T ss_pred             CCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             998799765121156556789999999999999955588


No 111
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O- methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, RNA-binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} PDB: 3id5_B*
Probab=97.38  E-value=0.00069  Score=42.01  Aligned_cols=94  Identities=17%  Similarity=0.031  Sum_probs=63.7

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHH-CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEE--ECHHHHHHHCCCCCCEE
Q ss_conf             12344311111467733565652-2755466347875000038999999999738980998--04266533124798699
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--ACRIQEAPQMITTCDVI  145 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI-~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi--~~r~e~~~~~~~~~d~v  145 (168)
                      ++++.+|+|+|+|.|.....+|= +-|+   +.|+.+|.++..+..+++..++.+....+.  ....++.+.....+|+|
T Consensus        74 lkpG~~VLdLG~G~G~~~~~la~~Vg~~---G~V~aVD~s~~~l~~a~~~a~~~~n~~~v~~d~~~~~~~~~~~~~vd~i  150 (232)
T 3id6_C           74 IRKGTKVLYLGAASGTTISHVSDIIELN---GKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVL  150 (232)
T ss_dssp             CCTTCEEEEETCTTSHHHHHHHHHHTTT---SEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCEEEEE
T ss_conf             8999999996771889999999971568---7699997999999999976565467763010146754537777369999


Q ss_pred             EECCCCCH---HHHHHHHHHHHCC
Q ss_conf             99147998---9999984885206
Q gi|254780807|r  146 SARALADL---DTLLEYSFPWLYQ  166 (168)
Q Consensus       146 ~sRA~a~l---~~ll~~~~pllk~  166 (168)
                      .+ .++..   ..++.-+..+||+
T Consensus       151 ~~-~~~~~~~~~~~l~~~~~~LKp  173 (232)
T 3id6_C          151 YV-DIAQPDQTDIAIYNAKFFLKV  173 (232)
T ss_dssp             EE-CCCCTTHHHHHHHHHHHHEEE
T ss_pred             EE-ECCCCCHHHHHHHHHHHHCCC
T ss_conf             98-525732199999999851589


No 112
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.38  E-value=0.00052  Score=42.75  Aligned_cols=87  Identities=15%  Similarity=0.041  Sum_probs=60.2

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECCC
Q ss_conf             34431111146773356565227554663478750000389999999997389809980426653312479869999147
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL  150 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA~  150 (168)
                      .+++|+|+|+|.|.-...++  .+   +.+++.+|.++.-+++.+   ++++-+..++++.++..+. .++||+|+|.++
T Consensus        45 ~~~~vLDiGcG~G~~~~~l~--~~---~~~v~gvD~S~~mi~~a~---~k~~~~~~~~~~d~~~~~~-~~~fD~I~~~~~  115 (220)
T 3hnr_A           45 SFGNVLEFGVGTGNLTNKLL--LA---GRTVYGIEPSREMRMIAK---EKLPKEFSITEGDFLSFEV-PTSIDTIVSTYA  115 (220)
T ss_dssp             CCSEEEEECCTTSHHHHHHH--HT---TCEEEEECSCHHHHHHHH---HHSCTTCCEESCCSSSCCC-CSCCSEEEEESC
T ss_pred             CCCEEEEECCCCCHHHHHHH--HC---CCEEEEEECCHHHHHHHH---HCCCCCCHHHHHHHHHHCC-CCCCCEEEEHHH
T ss_conf             97939997287859999999--77---998999958357789987---4256541033444544401-776488976344


Q ss_pred             CCH------HHHHHHHHHHHCC
Q ss_conf             998------9999984885206
Q gi|254780807|r  151 ADL------DTLLEYSFPWLYQ  166 (168)
Q Consensus       151 a~l------~~ll~~~~pllk~  166 (168)
                      -..      ..++.-....||+
T Consensus       116 l~h~~~~~~~~~l~~i~~~Lk~  137 (220)
T 3hnr_A          116 FHHLTDDEKNVAIAKYSQLLNK  137 (220)
T ss_dssp             GGGSCHHHHHHHHHHHHHHSCT
T ss_pred             HHHCCCHHHHHHHHHHHHHCCC
T ss_conf             8859937899999999998583


No 113
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.36  E-value=0.00068  Score=42.07  Aligned_cols=77  Identities=16%  Similarity=0.067  Sum_probs=59.3

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             23443111114677335656522755466347875000038999999999738980-99804266533124798699991
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ..+.++++||||.|+-.-++|-+-     ..++.+|....-..+-+...+.++..| .++++...+-.....+||.|..=
T Consensus        76 ~~g~~VLeIGsGtGY~tAlla~l~-----~~v~~ve~~~~~~~~a~~~~~~~~~~nv~~~~gdg~~g~~~~~pyD~Iiv~  150 (210)
T 3lbf_A           76 TPQSRVLEIGTGSGYQTAILAHLV-----QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVT  150 (210)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHS-----SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEES
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHH-----CEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEE
T ss_conf             899879996784069999999862-----832545422289999999988626667179985777677556980379996


Q ss_pred             CCC
Q ss_conf             479
Q gi|254780807|r  149 ALA  151 (168)
Q Consensus       149 A~a  151 (168)
                      |-.
T Consensus       151 ~a~  153 (210)
T 3lbf_A          151 AAP  153 (210)
T ss_dssp             SBC
T ss_pred             ECC
T ss_conf             412


No 114
>1r18_A Protein-L-isoaspartate(D-aspartate)-O- methyltransferase; isomerization, protein repair, S- adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.35  E-value=0.00034  Score=43.79  Aligned_cols=85  Identities=12%  Similarity=0.016  Sum_probs=57.9

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCC---CCEEEEEHHHHHHHHHHHHHHHH-----HCCCC-EEEECHHHHHHHC
Q ss_conf             012344311111467733565652275546---63478750000389999999997-----38980-9980426653312
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIE---GGLVNLIESKNKKASFLRYVVQK-----TAARG-KVFACRIQEAPQM  138 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~---~~~v~Lves~~KK~~FL~~~~~~-----L~L~~-~vi~~r~e~~~~~  138 (168)
                      .++.+.+++|||||.|+-.-.+|-+.....   ..+|+.+|..+.-+.+.++..++     ++..| .++++...+....
T Consensus        81 ~l~pg~~VLeIG~GtGy~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~A~~~l~~~~~~~l~~~nv~~~~~D~~~g~~~  160 (227)
T 1r18_A           81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP  160 (227)
T ss_dssp             TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG
T ss_pred             HCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHCCCCCEEEEECCCCCCCCC
T ss_conf             38999889995799779999999985331577766899994789999999999976051020566369997784557765


Q ss_pred             CCCCCEEEECCCCC
Q ss_conf             47986999914799
Q gi|254780807|r  139 ITTCDVISARALAD  152 (168)
Q Consensus       139 ~~~~d~v~sRA~a~  152 (168)
                      ..+||.|.+.|-.+
T Consensus       161 ~~~fD~I~v~~a~~  174 (227)
T 1r18_A          161 NAPYNAIHVGAAAP  174 (227)
T ss_dssp             GCSEEEEEECSCBS
T ss_pred             CCCCCEEEEEECHH
T ss_conf             56523688851155


No 115
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.35  E-value=0.00023  Score=44.76  Aligned_cols=75  Identities=9%  Similarity=-0.046  Sum_probs=54.8

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             34431111146773356565227554663478750000389999999997389--8099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ..++|+|+|+|.|.-.+.+|=     .+..|+.+|-+..-+...++-....+.  +++++++.+.+.. ....||+|+++
T Consensus        66 ~~~rVLdlGCG~G~~~~~la~-----~g~~V~giD~S~~ai~~a~~~~~~~~~~~~v~~~~~D~~~~~-~~~~fD~i~~~  139 (235)
T 3lcc_A           66 PLGRALVPGCGGGHDVVAMAS-----PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDY  139 (235)
T ss_dssp             CCEEEEEETCTTCHHHHHHCB-----TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEE
T ss_pred             CCCCEEEECCCCCHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHC-CCCCCCEEEEE
T ss_conf             999489943888789999986-----698799974669999999998764154421002325676717-55664579999


Q ss_pred             CCC
Q ss_conf             479
Q gi|254780807|r  149 ALA  151 (168)
Q Consensus       149 A~a  151 (168)
                      ++-
T Consensus       140 ~~~  142 (235)
T 3lcc_A          140 VFF  142 (235)
T ss_dssp             SST
T ss_pred             EEE
T ss_conf             871


No 116
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis V583} SCOP: c.66.1.46
Probab=97.35  E-value=0.00076  Score=41.78  Aligned_cols=86  Identities=17%  Similarity=0.028  Sum_probs=61.7

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-C-EEEECHHHHH----HHCCCCCC
Q ss_conf             2344311111467733565652275546634787500003899999999973898-0-9980426653----31247986
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G-KVFACRIQEA----PQMITTCD  143 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~-~vi~~r~e~~----~~~~~~~d  143 (168)
                      ..+.+|+|++||.|-=|+-.+-    ....+|+.||.+.+-+..+++-++.++.. + +++++.+.+.    .+...+||
T Consensus        43 ~~~~~vLDlf~GsG~~~~ea~s----rGa~~v~~Ve~~~~~~~~~~~N~~~~~~~~~~~i~~~d~~~~l~~~~~~~~~fD  118 (187)
T 2fhp_A           43 FDGGMALDLYSGSGGLAIEAVS----RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFD  118 (187)
T ss_dssp             CSSCEEEETTCTTCHHHHHHHH----TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEECCCCCCHHHHHHHH----CCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCC
T ss_conf             5999899988873789999997----588835899942467767665554202456417886107888776430267653


Q ss_pred             EEEEC---CCCCHHHHHHH
Q ss_conf             99991---47998999998
Q gi|254780807|r  144 VISAR---ALADLDTLLEY  159 (168)
Q Consensus       144 ~v~sR---A~a~l~~ll~~  159 (168)
                      +|..=   +-.....+++.
T Consensus       119 lIflDPPY~~~~~~~~l~~  137 (187)
T 2fhp_A          119 LVLLDPPYAKQEIVSQLEK  137 (187)
T ss_dssp             EEEECCCGGGCCHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHH
T ss_conf             5997898753179999999


No 117
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.34  E-value=0.0001  Score=46.79  Aligned_cols=54  Identities=9%  Similarity=0.025  Sum_probs=43.7

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             123443111114677335656522755466347875000038999999999738980
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG  125 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~  125 (168)
                      ...+.+|+|||+|.|...+-+|-.+|+.+   |+.||-+..-+...+.-++...+++
T Consensus        44 ~~~~~~vLDiGCG~G~~~i~la~~~~~~~---v~GiDis~~~i~~A~~n~~~~~~~~   97 (292)
T 3g07_A           44 WFRGRDVLDLGCNVGHLTLSIACKWGPSR---MVGLDIDSRLIHSARQNIRHYLSEE   97 (292)
T ss_dssp             GTTTSEEEEESCTTCHHHHHHHHHTCCSE---EEEEESCHHHHHHHHHTC-------
T ss_pred             CCCCCEEEEEECCCCHHHHHHHHHCCCCE---EEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf             16999599985797899999998789988---9997098899999999999830224


No 118
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase, structural genomics; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.33  E-value=0.00036  Score=43.64  Aligned_cols=86  Identities=14%  Similarity=0.047  Sum_probs=59.4

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECCC
Q ss_conf             34431111146773356565227554663478750000389999999997389809980426653312479869999147
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL  150 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA~  150 (168)
                      .+.+|+|||+|.|.-...++=     .+..|+.+|.+..-+...+   +.+ -+.....+.+++.+. ..+||+|+|..+
T Consensus        57 ~g~~VLDiGcG~G~~~~~la~-----~~~~v~giD~s~~ml~~a~---~~~-~~~~~~~~~~~~~~~-~~~fD~v~~~~~  126 (279)
T 3ccf_A           57 PGEFILDLGCGTGQLTEKIAQ-----SGAEVLGTDNAATMIEKAR---QNY-PHLHFDVADARNFRV-DKPLDAVFSNAM  126 (279)
T ss_dssp             TTCEEEEETCTTSHHHHHHHH-----TTCEEEEEESCHHHHHHHH---HHC-TTSCEEECCTTTCCC-SSCEEEEEEESC
T ss_pred             CCCEEEEECCCCCHHHHHHHH-----CCCEEEEEECHHHHHHHHH---HHC-CCCCEEEHHHCCCCC-CCCCCEEEEEEC
T ss_conf             969999935858599999996-----4998999916388999998---616-543111000001356-765538977520


Q ss_pred             ----CCHHHHHHHHHHHHCC
Q ss_conf             ----9989999984885206
Q gi|254780807|r  151 ----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       151 ----a~l~~ll~~~~pllk~  166 (168)
                          ..+..++.-....|++
T Consensus       127 l~~~~d~~~~l~~~~~~lkp  146 (279)
T 3ccf_A          127 LHWVKEPEAAIASIHQALKS  146 (279)
T ss_dssp             GGGCSCHHHHHHHHHHHEEE
T ss_pred             CCCCCCHHHHHHHHHHHCCC
T ss_conf             14567889999999997189


No 119
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.32  E-value=0.0012  Score=40.57  Aligned_cols=87  Identities=15%  Similarity=0.040  Sum_probs=58.7

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECCC
Q ss_conf             34431111146773356565227554663478750000389999999997389809980426653312479869999147
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL  150 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA~  150 (168)
                      .+++|+|+|+|.|.-...++=  .   +..|+.+|.++.-+...+   ++ .-+.++++..+++++.....||+|++..+
T Consensus        41 ~~grVLDiGcG~G~~~~~la~--~---g~~v~gvD~S~~~l~~ar---~~-~~~~~~~~~d~~~l~~~~~~fD~I~~~~v  111 (203)
T 3h2b_A           41 VDGVILDVGSGTGRWTGHLAS--L---GHQIEGLEPATRLVELAR---QT-HPSVTFHHGTITDLSDSPKRWAGLLAWYS  111 (203)
T ss_dssp             CCSCEEEETCTTCHHHHHHHH--T---TCCEEEECCCHHHHHHHH---HH-CTTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred             CCCCEEEECCCCCHHHHHHHH--C---CCEEEEEECCHHHHHHHH---HC-CCCCEEEECCCCCCCCCCCCCCEEEEECC
T ss_conf             998499973788799999997--7---996999969788999997---44-88734998621012234566668999465


Q ss_pred             C------CHHHHHHHHHHHHCC
Q ss_conf             9------989999984885206
Q gi|254780807|r  151 A------DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       151 a------~l~~ll~~~~pllk~  166 (168)
                      -      .+..+++-....||+
T Consensus       112 l~h~~~~d~~~~l~~~~~~Lkp  133 (203)
T 3h2b_A          112 LIHMGPGELPDALVALRMAVED  133 (203)
T ss_dssp             STTCCTTTHHHHHHHHHHTEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHCCC
T ss_conf             1149979999999999987689


No 120
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.31  E-value=0.00021  Score=44.98  Aligned_cols=120  Identities=15%  Similarity=0.141  Sum_probs=65.2

Q ss_pred             CCCHHHHHHHHHHH-HHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCC
Q ss_conf             99989999999999-99998463213043089999989864635643100123443111114677335656522755466
Q gi|254780807|r   20 NVSRETLEKLEYFY-FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG   98 (168)
Q Consensus        20 ~ls~eq~~~l~~y~-~ll~~~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~   98 (168)
                      +-|+|..+++..-+ ..-..|++.  +++. +.+...+..+.+      .++.+.+|+|||+|.|.-.+.|+=     .+
T Consensus         5 ~~~~~~~d~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~l~~------~l~pg~rVLDvGCGtG~~a~~La~-----~g   70 (226)
T 3m33_A            5 NHSRESYDRLARELGGYRHPWARV--LSGP-DPELTFDLWLSR------LLTPQTRVLEAGCGHGPDAARFGP-----QA   70 (226)
T ss_dssp             ---CHHHHHHHHHHTTTSCCSCCE--ESSS-CTTHHHHHHHHH------HCCTTCEEEEESCTTSHHHHHHGG-----GS
T ss_pred             HHHHHHHHHHHHHHCCCCCHHHHH--CCCC-CHHHHHHHHHHH------HCCCCCEEEEECCCCCHHHHHHHC-----CC
T ss_conf             367899999998726653536675--0598-867999999995------189999799988465864577751-----68


Q ss_pred             CEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHH-HHH-CCCCCCEEEECCCCCHHHHHH
Q ss_conf             347875000038999999999738980998042665-331-247986999914799899999
Q gi|254780807|r   99 GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQ-MITTCDVISARALADLDTLLE  158 (168)
Q Consensus        99 ~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~-~~~-~~~~~d~v~sRA~a~l~~ll~  158 (168)
                      ..|+.+|.++.-+...++   .. -+..++...+.+ ++. ....||+|+|+ +.+...+.+
T Consensus        71 ~~V~giD~S~~mi~~Ar~---~~-~~~~~~~~~~~~~lp~~~~~~FD~V~s~-~~~~~~l~e  127 (226)
T 3m33_A           71 ARWAAYDFSPELLKLARA---NA-PHADVYEWNGKGELPAGLGAPFGLIVSR-RGPTSVILR  127 (226)
T ss_dssp             SEEEEEESCHHHHHHHHH---HC-TTSEEEECCSCSSCCTTCCCCEEEEEEE-SCCSGGGGG
T ss_pred             CEEEECCCCHHHHHHHHH---HC-CCCCEEEEECCCCCCCCCCCCEEEEEEC-CCHHHHHHH
T ss_conf             689965799999999998---58-9997899746667988789964699976-899999999


No 121
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 2.05A {Escherichia coli K12} SCOP: c.66.1.46
Probab=97.31  E-value=0.00057  Score=42.49  Aligned_cols=86  Identities=15%  Similarity=0.106  Sum_probs=63.5

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHH-HHHCCCCCCEEEEC
Q ss_conf             3443111114677335656522755466347875000038999999999738980-998042665-33124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~-~~~~~~~~d~v~sR  148 (168)
                      .+.+++|+.+|.|-=||- |+-+.   ..+|+.||.+.+-+..+++-+..++.++ ++++..+.+ +.....+||+|..=
T Consensus        54 ~~~~vLDLfaGsG~lgiE-alsRG---a~~v~fVE~~~~a~~~l~~N~~~~~~~~~~ii~~d~~~~l~~~~~~fDlIflD  129 (202)
T 2fpo_A           54 VDAQCLDCFAGSGALGLE-ALSRY---AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVD  129 (202)
T ss_dssp             TTCEEEETTCTTCHHHHH-HHHTT---CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEEC
T ss_pred             CCCEEEECCCCCCHHHHH-HHCCC---CCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCCEEEEC
T ss_conf             898699888785588999-87079---98868999703335678878987463553599532456554127766689976


Q ss_pred             C---CCCHHHHHHHH
Q ss_conf             4---79989999984
Q gi|254780807|r  149 A---LADLDTLLEYS  160 (168)
Q Consensus       149 A---~a~l~~ll~~~  160 (168)
                      -   -.....+++..
T Consensus       130 PPY~~~~~~~~l~~l  144 (202)
T 2fpo_A          130 PPFRRGLLEETINLL  144 (202)
T ss_dssp             CSSSTTTHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHH
T ss_conf             998754599999999


No 122
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.29  E-value=0.0015  Score=40.07  Aligned_cols=90  Identities=14%  Similarity=0.007  Sum_probs=56.0

Q ss_pred             HHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHH-H-HHCCCCC
Q ss_conf             3100123443111114677335656522755466347875000038999999999738980998042665-3-3124798
Q gi|254780807|r   65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-A-PQMITTC  142 (168)
Q Consensus        65 ~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~-~-~~~~~~~  142 (168)
                      +.++++.+++|+|||+|.|.-.-.  +..   .+..++.+|.+.+-+.+.+.     +  ...+...+++ . +-...+|
T Consensus        35 ~i~~~~~~~~vLDiGCG~G~~~~~--l~~---~g~~v~GiD~s~~~i~~a~~-----~--~~~~~~~~~~~~~~~~~~~f  102 (240)
T 3dli_A           35 YIPYFKGCRRVLDIGCGRGEFLEL--CKE---EGIESIGVDINEDMIKFCEG-----K--FNVVKSDAIEYLKSLPDKYL  102 (240)
T ss_dssp             GGGGTTTCSCEEEETCTTTHHHHH--HHH---HTCCEEEECSCHHHHHHHHT-----T--SEEECSCHHHHHHTSCTTCB
T ss_pred             HHHCCCCCCEEEEECCCCCHHHHH--HHH---CCCEEEEEECCHHHHHHHHH-----H--CCCCHHHHHHHHCCCCCCCC
T ss_conf             752268999699973878599999--997---79959999677078788765-----1--11001006664023543476


Q ss_pred             CEEEECCCC------CHHHHHHHHHHHHCC
Q ss_conf             699991479------989999984885206
Q gi|254780807|r  143 DVISARALA------DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       143 d~v~sRA~a------~l~~ll~~~~pllk~  166 (168)
                      |+|++..+-      .+..+++-....||+
T Consensus       103 D~V~~~~vleH~~~~~~~~~l~e~~r~Lkp  132 (240)
T 3dli_A          103 DGVMISHFVEHLDPERLFELLSLCYSKMKY  132 (240)
T ss_dssp             SEEEEESCGGGSCGGGHHHHHHHHHHHBCT
T ss_pred             CEEEEECEEEECCHHHHHHHHHHHHHHCCC
T ss_conf             588762101206827899999999986084


No 123
>3hvi_A Catechol O-methyltransferase; neurotransmitter degradation, alternative initiation, catecholamine metabolism, cell membrane, cytoplasm; HET: 619; 1.20A {Rattus norvegicus} PDB: 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 2zlb_A 2zth_A* 2zvj_A* 3a7d_A* 3bwm_A* 3bwy_A* 3a7e_A*
Probab=97.27  E-value=0.0019  Score=39.43  Aligned_cols=95  Identities=19%  Similarity=0.208  Sum_probs=70.6

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHH-HH-----CCCC
Q ss_conf             2344311111467733565652275546634787500003899999999973898--09980426653-31-----2479
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEA-PQ-----MITT  141 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~-~~-----~~~~  141 (168)
                      .++++++++|||.|.-.+-+|=+.|.  .+.++.+|...+.....++.+++.++.  ++++.+.+.+. ++     ....
T Consensus        57 ~kpk~iLEiGt~~G~Stl~la~al~~--~g~v~~id~~~~~~~~ar~~~~~agl~~~I~l~~gd~~e~l~~l~~~~~~~~  134 (221)
T 3hvi_A           57 YSPSLVLELGAYCGYSAVRMARLLQP--GARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT  134 (221)
T ss_dssp             HCCSEEEEECCTTSHHHHHHHTTCCT--TCEEEEECCCHHHHHHHHHHHHHHTCTTTEEEECSCHHHHGGGHHHHHCCSC
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHCCC--CCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCC
T ss_conf             19999999714742999999985799--9789999888412589999999759977415883779999998775347653


Q ss_pred             CCEEEECCCCCHHH---HHHHHHHHHCC
Q ss_conf             86999914799899---99984885206
Q gi|254780807|r  142 CDVISARALADLDT---LLEYSFPWLYQ  166 (168)
Q Consensus       142 ~d~v~sRA~a~l~~---ll~~~~pllk~  166 (168)
                      ||+|..=+......   .+..+.++|++
T Consensus       135 fD~vfiD~~~~~~~~~~~~~~~~~lL~p  162 (221)
T 3hvi_A          135 LDMVFLDHWKDRYLPDTLLLEKCGLLRK  162 (221)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTTCCCT
T ss_pred             EEEEEECCCCHHCCCHHHHHHHHCCCCC
T ss_conf             2589974670202469999998488188


No 124
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.25  E-value=0.00084  Score=41.54  Aligned_cols=89  Identities=17%  Similarity=0.155  Sum_probs=57.6

Q ss_pred             HCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEE
Q ss_conf             00123443111114677335656522755466347875000038999999999738980998042665331247986999
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      ..++.+.+|+|||+|.|.....++=.     +..|+.+|.+..-+   +.+.++.+.++..  ...++.. ...+||.|+
T Consensus        39 ~~l~~~~~VLDvGCG~G~~~~~l~~~-----g~~v~gvD~s~~~i---~~a~~~~~~~~~~--~~~~~~~-~~~~fD~I~  107 (211)
T 3e23_A           39 GELPAGAKILELGCGAGYQAEAMLAA-----GFDVDATDGSPELA---AEASRRLGRPVRT--MLFHQLD-AIDAYDAVW  107 (211)
T ss_dssp             TTSCTTCEEEESSCTTSHHHHHHHHT-----TCEEEEEESCHHHH---HHHHHHHTSCCEE--CCGGGCC-CCSCEEEEE
T ss_pred             HHCCCCCEEEEECCCCCHHHHHHHHC-----CCCEEEEECCHHHH---HHHHHHCCCCCEE--EEEECCC-CCCCCCHHH
T ss_conf             61899898999868886999999975-----99232341469999---9999860886201--1220255-322331365


Q ss_pred             ECCCCC------HHHHHHHHHHHHCC
Q ss_conf             914799------89999984885206
Q gi|254780807|r  147 ARALAD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       147 sRA~a~------l~~ll~~~~pllk~  166 (168)
                      +.++-.      ...++.-...+|++
T Consensus       108 ~~~~l~~l~~~~~~~~~~~~~~~Lkp  133 (211)
T 3e23_A          108 AHACLLHVPRDELADVLKLIWRALKP  133 (211)
T ss_dssp             ECSCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             44346518978999999999997396


No 125
>1im8_A YECO; methyltransferase, adenosylhomocysteine, structural genomics, hypothetical protein, structure 2 function project, S2F; HET: SAI; 2.20A {Haemophilus influenzae rd KW20} SCOP: c.66.1.14
Probab=97.25  E-value=0.0012  Score=40.59  Aligned_cols=97  Identities=13%  Similarity=0.096  Sum_probs=64.9

Q ss_pred             HCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHHHHHCCCCCCE
Q ss_conf             00123443111114677335656522755466347875000038999999999738980--9980426653312479869
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~~~~~~~~~d~  144 (168)
                      .+.+.+.+++|+|+|.|--...++-..+. .+.+++.+|.++.-+...++-.+..+.+.  ...+..+.+.+  ..++|+
T Consensus        54 ~~~~~~~~vLDlGcGtG~~~~~l~~~~~~-~~~~v~giD~S~~ml~~A~~k~~~~~~~~~~~~~~~d~~~~~--~~~~d~  130 (244)
T 1im8_A           54 RFVTADSNVYDLGCSRGAATLSARRNINQ-PNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVE--IKNASM  130 (244)
T ss_dssp             HHCCTTCEEEEESCTTCHHHHHHHHTCCC-SSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCC--CCSEEE
T ss_pred             HHCCCCCEEEEEEECCCHHHHHHHHHCCC-CCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCE
T ss_conf             86799798999200222889998863369-980899976978999999864431065432110123210001--243212


Q ss_pred             EEECCC-C-----CHHHHHHHHHHHHCC
Q ss_conf             999147-9-----989999984885206
Q gi|254780807|r  145 ISARAL-A-----DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       145 v~sRA~-a-----~l~~ll~~~~pllk~  166 (168)
                      +++=-+ .     ....+++-....||+
T Consensus       131 i~~~~~l~~~~~~d~~~~l~~i~~~Lkp  158 (244)
T 1im8_A          131 VILNFTLQFLPPEDRIALLTKIYEGLNP  158 (244)
T ss_dssp             EEEESCGGGSCGGGHHHHHHHHHHHEEE
T ss_pred             EEEEEEEEECCHHHHHHHHHHHHHHCCC
T ss_conf             6886422305617889999999851789


No 126
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.24  E-value=0.0013  Score=40.41  Aligned_cols=110  Identities=13%  Similarity=0.028  Sum_probs=72.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--E
Q ss_conf             89999989864635643100123443111114677335656522755466347875000038999999999738980--9
Q gi|254780807|r   49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--K  126 (168)
Q Consensus        49 ~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~  126 (168)
                      .+.++. +.+-+|-+.-.--+..+.+|+|||+|-|=|.+-+|=.+    +..|+-+..+..-+.+.++-+.+.++..  .
T Consensus        43 ~tL~eA-Q~~k~~~l~~~l~l~~G~~VLDiGCG~G~~a~~~A~~~----g~~v~git~s~~q~~~a~~~~~~~~~~~~~~  117 (287)
T 1kpg_A           43 MTLQEA-QIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY----DVNVVGLTLSKNQANHVQQLVANSENLRSKR  117 (287)
T ss_dssp             CCHHHH-HHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH----CCEEEEEESCHHHHHHHHHHHHTCCCCSCEE
T ss_pred             CCHHHH-HHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHHHHHHHCCCCHHH
T ss_conf             999999-99999999997199999989996885259999999967----9846999689999999999987614540157


Q ss_pred             EEECHHHHHHHCCCCCCEEEECCC------CCHHHHHHHHHHHHCC
Q ss_conf             980426653312479869999147------9989999984885206
Q gi|254780807|r  127 VFACRIQEAPQMITTCDVISARAL------ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       127 vi~~r~e~~~~~~~~~d~v~sRA~------a~l~~ll~~~~pllk~  166 (168)
                      +.....++.   .++||.|+|=-.      .....+++-+..+||+
T Consensus       118 ~~~~d~~~~---~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkp  160 (287)
T 1kpg_A          118 VLLAGWEQF---DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPA  160 (287)
T ss_dssp             EEESCGGGC---CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHC---CCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHCCC
T ss_conf             887436641---3776405553227750747799999999974699


No 127
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 2zzm_A*
Probab=97.24  E-value=0.0011  Score=40.95  Aligned_cols=89  Identities=8%  Similarity=0.052  Sum_probs=65.5

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEE
Q ss_conf             12344311111467733565652275546634787500003899999999973898--0998042665331247986999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      ...+..++|+|+|-|-=+|+  +.    +...|+.+|.++.-+..+++-++..++.  .+++++.+.+.   ..+||.|+
T Consensus       193 ~~~~~~vlD~f~g~G~~~i~--~~----~~~~v~a~d~n~~a~~~~~~N~~~N~~~~~v~~~~~D~~~~---~~~~D~Ii  263 (336)
T 2yx1_A          193 VSLNDVVVDMFAGVGPFSIA--CK----NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV---DVKGNRVI  263 (336)
T ss_dssp             CCTTCEEEETTCTTSHHHHH--TT----TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC---CCCEEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHH--CC----CCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHC---CCCCCEEE
T ss_conf             17898899965764676653--13----55169999799999999999999829987589995753454---56874999


Q ss_pred             ECCCCCHHHHHHHHHHHHCC
Q ss_conf             91479989999984885206
Q gi|254780807|r  147 ARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       147 sRA~a~l~~ll~~~~pllk~  166 (168)
                      +=--..-..+++-+.++|++
T Consensus       264 ~~~P~~~~~~l~~a~~~l~~  283 (336)
T 2yx1_A          264 MNLPKFAHKFIDKALDIVEE  283 (336)
T ss_dssp             ECCTTTGGGGHHHHHHHEEE
T ss_pred             ECCHHHHHHHHHHHHHHHCC
T ss_conf             65804669999999998367


No 128
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.23  E-value=0.0017  Score=39.71  Aligned_cols=92  Identities=11%  Similarity=-0.014  Sum_probs=70.1

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC---CEEEECHHHHHH----HCCCCCC
Q ss_conf             344311111467733565652275546634787500003899999999973898---099804266533----1247986
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR---GKVFACRIQEAP----QMITTCD  143 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~---~~vi~~r~e~~~----~~~~~~d  143 (168)
                      .+.+++|++||.|--|+..|-.    ...+|+.||.+..-+...++-.+..+++   .++++..+.+..    ....+||
T Consensus       220 ~g~rVLdlf~~tG~~si~Aa~~----GA~~V~~vD~s~~al~~a~~N~~~Ngl~~~~~~~i~~d~~~~l~~~~~~~~~fD  295 (396)
T 3c0k_A          220 ENKRVLNCFSYTGGFAVSALMG----GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFD  295 (396)
T ss_dssp             TTCEEEEESCTTCSHHHHHHHT----TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEECCCCCCHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHCCCC
T ss_conf             9986875388668899999977----997599998989999999999998299843457894229999999987535999


Q ss_pred             EEEE-------------CCCCCHHHHHHHHHHHHCC
Q ss_conf             9999-------------1479989999984885206
Q gi|254780807|r  144 VISA-------------RALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       144 ~v~s-------------RA~a~l~~ll~~~~pllk~  166 (168)
                      +|+.             +|......++..+.++|++
T Consensus       296 ~IilDPP~f~~~~~~~~~a~~~y~~l~~~a~~lL~p  331 (396)
T 3c0k_A          296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNE  331 (396)
T ss_dssp             EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEE
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             899878322456166788999999999999987289


No 129
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.22  E-value=0.0012  Score=40.59  Aligned_cols=101  Identities=16%  Similarity=-0.030  Sum_probs=65.2

Q ss_pred             HHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEECHHHHH-HHC
Q ss_conf             5643100123443111114677335656522755466347875000038999999999738980--9980426653-312
Q gi|254780807|r   62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEA-PQM  138 (168)
Q Consensus        62 Sl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~r~e~~-~~~  138 (168)
                      +..+-.+++++.+|+|+|+|.|-.-..++=.    ....|+.+|.+..-+...++-....+.+.  ..+.+.+... ...
T Consensus        55 ~~Li~~~~~~~~~VLDlGCG~G~~~~~~~~~----~~~~v~GiD~S~~~l~~a~~r~~~~~~~~~~~f~~~d~~~~~~~~  130 (298)
T 1ri5_A           55 ACLIRLYTKRGDSVLDLGCGKGGDLLKYERA----GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDL  130 (298)
T ss_dssp             HHHHHHHCCTTCEEEEETCTTTTTHHHHHHH----TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCC
T ss_pred             HHHHHHHCCCCCEEEEECCCCCHHHHHHHHC----CCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCC
T ss_conf             9999984899598999637087899999966----998588758999999999999875288752377864565521013


Q ss_pred             CCCCCEEEECCCCC--------HHHHHHHHHHHHCC
Q ss_conf             47986999914799--------89999984885206
Q gi|254780807|r  139 ITTCDVISARALAD--------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       139 ~~~~d~v~sRA~a~--------l~~ll~~~~pllk~  166 (168)
                      ..+||+|++..+..        +..+++-....|++
T Consensus       131 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lkp  166 (298)
T 1ri5_A          131 GKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRP  166 (298)
T ss_dssp             SSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEE
T ss_pred             CCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf             777558997365444278788999999999986689


No 130
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 1pry_A
Probab=97.18  E-value=0.00098  Score=41.14  Aligned_cols=94  Identities=17%  Similarity=0.060  Sum_probs=60.9

Q ss_pred             CCCCCCCEEECCCCCHHHHHHH-HCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHH---HHHHCCCCCCE
Q ss_conf             1234431111146773356565-2275546634787500003899999999973898099804266---53312479869
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---EAPQMITTCDV  144 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~la-I~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e---~~~~~~~~~d~  144 (168)
                      +.++.+|+|+|+|.|.....+| ++-|+   +.|+.+|.++....-+++.+++.+. ...+...+.   ..+.....+|+
T Consensus        71 i~pG~~VLDlG~G~G~~~~~la~~vg~~---G~V~avD~s~~~l~~l~~~~~~~~n-i~~v~~da~~~~~~~~~~~~vd~  146 (227)
T 1g8a_A           71 IKPGKSVLYLGIASGTTASHVSDIVGWE---GKIFGIEFSPRVLRELVPIVEERRN-IVPILGDATKPEEYRALVPKVDV  146 (227)
T ss_dssp             CCTTCEEEEETTTSTTHHHHHHHHHCTT---SEEEEEESCHHHHHHHHHHHSSCTT-EEEEECCTTCGGGGTTTCCCEEE
T ss_pred             CCCCCEEEEEECCCCHHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHHCCC-CEEEEEECCCHHHCCCCCCEEEE
T ss_conf             8999999997178788999999984899---6699998999999999987876698-34999876794465445671999


Q ss_pred             EEECC--CCCHHHHHHHHHHHHCC
Q ss_conf             99914--79989999984885206
Q gi|254780807|r  145 ISARA--LADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       145 v~sRA--~a~l~~ll~~~~pllk~  166 (168)
                      +.+=-  ......++.-+..+||+
T Consensus       147 v~~~~~~~~~~~~~l~~~~~~Lkp  170 (227)
T 1g8a_A          147 IFEDVAQPTQAKILIDNAEVYLKR  170 (227)
T ss_dssp             EEECCCSTTHHHHHHHHHHHHEEE
T ss_pred             EEEEECCCCCHHHHHHHHHHHCCC
T ss_conf             997600054068999999984599


No 131
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.13  E-value=0.00092  Score=41.29  Aligned_cols=84  Identities=14%  Similarity=0.067  Sum_probs=56.1

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECCC
Q ss_conf             34431111146773356565227554663478750000389999999997389809980426653312479869999147
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL  150 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA~  150 (168)
                      ++++|+|||+|.|.-...++=.     ...|+.+|.+..-+...++     ++++........+++  ...||+|++..+
T Consensus        17 ~~~~VLDiGcG~G~~~~~l~~~-----~~~v~gvD~s~~~i~~a~~-----~~~~~~~~~~~~~l~--~~~fD~i~~~~~   84 (170)
T 3i9f_A           17 KKGVIVDYGCGNGFYCKYLLEF-----ATKLYCIDINVIALKEVKE-----KFDSVITLSDPKEIP--DNSVDFILFANS   84 (170)
T ss_dssp             CCEEEEEETCTTCTTHHHHHTT-----EEEEEEECSCHHHHHHHHH-----HCTTSEEESSGGGSC--TTCEEEEEEESC
T ss_pred             CCCEEEEEECCCCHHHHHHHHC-----CCEEEEEECCCCCCCEECC-----CCEEEEEEECCCCCC--CCCEEEEEEEEE
T ss_conf             9697999808997999999962-----9989999456420100012-----210355320012378--785789998503


Q ss_pred             ----CCHHHHHHHHHHHHCC
Q ss_conf             ----9989999984885206
Q gi|254780807|r  151 ----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       151 ----a~l~~ll~~~~pllk~  166 (168)
                          .....+++-..+.||+
T Consensus        85 l~~~~~~~~~l~~i~r~Lkp  104 (170)
T 3i9f_A           85 FHDMDDKQHVISEVKRILKD  104 (170)
T ss_dssp             STTCSCHHHHHHHHHHHEEE
T ss_pred             EECCCCHHHHHHHHHHHCCC
T ss_conf             34177999999999997587


No 132
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.79A {Cyanidioschyzon merolae strain 10D}
Probab=97.12  E-value=0.0014  Score=40.16  Aligned_cols=110  Identities=18%  Similarity=0.178  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHH-HHHHCCC------CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHH-HHHHHHHHHHHHHCC
Q ss_conf             999898646356-4310012------34431111146773356565227554663478750000-389999999997389
Q gi|254780807|r   52 EDFWIRHVEDSL-RVFQLHP------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN-KKASFLRYVVQKTAA  123 (168)
Q Consensus        52 ~~~~~rHi~DSl-~~~~~~~------~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~-KK~~FL~~~~~~L~L  123 (168)
                      .-.|-.++++|- .+..++.      .+++|+|+|+|.|+|||.+|..-..    .|+..|-.. --...++.-++..+.
T Consensus        53 ~~~~g~~lW~aa~~La~~L~~~~~~~~Gk~VLELGaGtGl~gl~aA~~ga~----~Vv~tD~~~~~~~~~l~~Nv~~N~~  128 (281)
T 3bzb_A           53 HPLWTSHVWSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGAD----QVVATDYPDPEILNSLESNIREHTA  128 (281)
T ss_dssp             ---------CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCS----EEEEEECSCHHHHHHHHHHHHTTCC
T ss_pred             CCCCCEEEHHHHHHHHHHHHHCHHHCCCCEEEEECCHHHHHHHHHHHHCCC----EEEEEECCCHHHHHHHHHHHHHHCC
T ss_conf             886564656799999999983923309982999785522999999985898----7999976967889999999998545


Q ss_pred             CC-----------EEEECHHH----HH--HHCCCCCCEEEECCC----CCHHHHHHHHHHHHC
Q ss_conf             80-----------99804266----53--312479869999147----998999998488520
Q gi|254780807|r  124 RG-----------KVFACRIQ----EA--PQMITTCDVISARAL----ADLDTLLEYSFPWLY  165 (168)
Q Consensus       124 ~~-----------~vi~~r~e----~~--~~~~~~~d~v~sRA~----a~l~~ll~~~~pllk  165 (168)
                      .+           .+......    ..  .....+||+|++=-+    ...+.|+.-...+|+
T Consensus       129 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~fDvIi~aDvvY~~~~~~~L~~ti~~lL~  191 (281)
T 3bzb_A          129 NSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLA  191 (281)
T ss_dssp             ----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBC
T ss_pred             CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf             565533346775179961356664100011236778768853001466679999999999963


No 133
>1xva_A Glycine N-methyltransferase; HET: SAM; 2.20A {Escherichia coli} SCOP: c.66.1.5 PDB: 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.10  E-value=0.00054  Score=42.63  Aligned_cols=102  Identities=11%  Similarity=0.016  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-----EEEEC
Q ss_conf             9864635643100123443111114677335656522755466347875000038999999999738980-----99804
Q gi|254780807|r   56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-----KVFAC  130 (168)
Q Consensus        56 ~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-----~vi~~  130 (168)
                      ..++.+.+..    ....+|+|+|+|.|...++||=.     +..|+.+|.+..-+...++-....+...     .+...
T Consensus        45 ~~~~~~~l~~----~~~~~vLDiGcG~G~~~~~la~~-----g~~v~gvD~s~~ml~~a~~~~~~~~~~~~~~~~~~~~~  115 (292)
T 1xva_A           45 KAWLLGLLRQ----HGCHRVLDVACGTGVDSIMLVEE-----GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA  115 (292)
T ss_dssp             HHHHHHHHHH----TTCCEEEESSCTTSHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC
T ss_pred             HHHHHHHHHH----CCCCEEEEECCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEC
T ss_conf             9999996413----18499999047884999999977-----99699998999999999999986444656313566411


Q ss_pred             HHHHH---HHCCCCCCEEEECC--C----------CCHHHHHHHHHHHHCC
Q ss_conf             26653---31247986999914--7----------9989999984885206
Q gi|254780807|r  131 RIQEA---PQMITTCDVISARA--L----------ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       131 r~e~~---~~~~~~~d~v~sRA--~----------a~l~~ll~~~~pllk~  166 (168)
                      +....   .....+||.|++-.  +          ..+..+++-+...||+
T Consensus       116 ~~~~~~~~~~~~~~fD~v~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp  166 (292)
T 1xva_A          116 NWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP  166 (292)
T ss_dssp             CGGGHHHHSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEE
T ss_pred             CCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             101244345666761399990622644588443768999999999987882


No 134
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.06  E-value=0.00087  Score=41.44  Aligned_cols=74  Identities=14%  Similarity=0.058  Sum_probs=56.4

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC----CCEEEECHHHHHHHCCCCCCE
Q ss_conf             1234431111146773356565227554663478750000389999999997389----809980426653312479869
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA----RGKVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L----~~~vi~~r~e~~~~~~~~~d~  144 (168)
                      .+.+++|+|+|+|.|.-.++||=     .+..|+.+|.+..-+...+.-..+.++    +.+++++.+++++. ..+||.
T Consensus        80 ~p~~g~vLDlGcG~G~~~~~la~-----~g~~v~gvD~s~~ml~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~  153 (299)
T 3g2m_A           80 GPVSGPVLELAAGMGRLTFPFLD-----LGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGT  153 (299)
T ss_dssp             CCCCSCEEEETCTTTTTHHHHHT-----TTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCC-CCCCCE
T ss_conf             99999799991667789999997-----799799996999999999999986476632204478603210674-555312


Q ss_pred             EEEC
Q ss_conf             9991
Q gi|254780807|r  145 ISAR  148 (168)
Q Consensus       145 v~sR  148 (168)
                      |++-
T Consensus       154 v~~~  157 (299)
T 3g2m_A          154 VVIS  157 (299)
T ss_dssp             EEEC
T ss_pred             EEEE
T ss_conf             4897


No 135
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.06  E-value=0.0014  Score=40.24  Aligned_cols=88  Identities=9%  Similarity=-0.016  Sum_probs=60.1

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEE
Q ss_conf             123443111114677335656522755466347875000038999999999738980-9980426653312479869999
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      .+.+++|+|+|+|.|.=...++-.     +..|+.+|.+..-+...    ++.++.+ +++...+++++. ..+||.|++
T Consensus        44 ~~~~~~vLDvGcG~G~~~~~la~~-----g~~v~gvD~S~~~l~~a----~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~  113 (218)
T 3ou2_A           44 GNIRGDVLELASGTGYWTRHLSGL-----ADRVTALDGSAEMIAEA----GRHGLDNVEFRQQDLFDWTP-DRQWDAVFF  113 (218)
T ss_dssp             TTSCSEEEEESCTTSHHHHHHHHH-----SSEEEEEESCHHHHHHH----GGGCCTTEEEEECCTTSCCC-SSCEEEEEE
T ss_pred             CCCCCCEEEECCCCCHHHHHHHHC-----CCEEEEEECCCHHHHHH----HHHHCCCEEECCCHHHCCCC-CCCCEEEEE
T ss_conf             688997999889887899999961-----99899997831789999----97305511100110101256-887328997


Q ss_pred             CCCCC------HHHHHHHHHHHHCC
Q ss_conf             14799------89999984885206
Q gi|254780807|r  148 RALAD------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA~a~------l~~ll~~~~pllk~  166 (168)
                      ..+..      +..+++-....||+
T Consensus       114 ~~~l~h~~~~~~~~~~~~~~r~Lkp  138 (218)
T 3ou2_A          114 AHWLAHVPDDRFEAFWESVRSAVAP  138 (218)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred             EEEHHHCCHHHHHHHHHHHHHHCCC
T ss_conf             2126648906899999999987398


No 136
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.04  E-value=0.0033  Score=38.08  Aligned_cols=93  Identities=18%  Similarity=0.091  Sum_probs=61.5

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHH---HHHHCCCCCCE
Q ss_conf             123443111114677335656522-75546634787500003899999999973898099804266---53312479869
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---EAPQMITTCDV  144 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e---~~~~~~~~~d~  144 (168)
                      ++.+.+|+|+|+|.|.....+|=. -|+   +.|+.+|.+......+++...+.. |...+...+.   ..+.....+|.
T Consensus        75 lkpG~~VLDlG~G~G~~~~~la~~vg~~---G~V~aVD~s~~~l~~a~~~a~~~~-ni~~i~~d~~~~~~~~~~~~~vd~  150 (233)
T 2ipx_A           75 IKPGAKVLYLGAASGTTVSHVSDIVGPD---GLVYAVEFSHRSGRDLINLAKKRT-NIIPVIEDARHPHKYRMLIAMVDV  150 (233)
T ss_dssp             CCTTCEEEEECCTTSHHHHHHHHHHCTT---CEEEEECCCHHHHHHHHHHHHHCT-TEEEECSCTTCGGGGGGGCCCEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHHCC-CCCEEEEECCCCHHCCCCCCEEEE
T ss_conf             9999999996576898999999985999---679999799999999999755146-664289753670111566526888


Q ss_pred             EEECCCCC---HHHHHHHHHHHHCC
Q ss_conf             99914799---89999984885206
Q gi|254780807|r  145 ISARALAD---LDTLLEYSFPWLYQ  166 (168)
Q Consensus       145 v~sRA~a~---l~~ll~~~~pllk~  166 (168)
                      +.+ .+..   ...++.-+.++||+
T Consensus       151 i~~-~~~~~~~~~~~l~~~~r~LKp  174 (233)
T 2ipx_A          151 IFA-DVAQPDQTRIVALNAHTFLRN  174 (233)
T ss_dssp             EEE-CCCCTTHHHHHHHHHHHHEEE
T ss_pred             EEC-CCCCCHHHHHHHHHHHHHCCC
T ss_conf             531-422651599999999985689


No 137
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.02  E-value=0.0019  Score=39.48  Aligned_cols=73  Identities=14%  Similarity=0.101  Sum_probs=53.7

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECC
Q ss_conf             23443111114677335656522755466347875000038999999999738980998042665331247986999914
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA  149 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA  149 (168)
                      ..+.+++|+|+|.|.-...++=.+|+..   ++.+|.+..-+...   .++ .-+...+.+.+++++-..+.||+|++..
T Consensus        84 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~---~~gvD~s~~~l~~a---~~~-~~~~~~~~~d~~~lp~~d~sfD~v~~~~  156 (269)
T 1p91_A           84 DKATAVLDIGCGEGYYTHAFADALPEIT---TFGLDVSKVAIKAA---AKR-YPQVTFCVASSHRLPFSDTSMDAIIRIY  156 (269)
T ss_dssp             TTCCEEEEETCTTSTTHHHHHHTCTTSE---EEEEESCHHHHHHH---HHH-CTTSEEEECCTTSCSBCTTCEEEEEEES
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHCCCCE---EEEEECCHHHHHHH---HHC-CCCCCCEECCHHHCCCCCCCEEEEECCC
T ss_conf             8899699968989699999998689968---99997958899999---851-7754300023421678998577874206


No 138
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genomics, JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.00  E-value=0.0003  Score=44.13  Aligned_cols=88  Identities=19%  Similarity=0.132  Sum_probs=54.3

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CE-EEECHHHH-HHHCCCCCCEEE
Q ss_conf             2344311111467733565652275546634787500003899999999973898-09-98042665-331247986999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GK-VFACRIQE-APQMITTCDVIS  146 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~~-vi~~r~e~-~~~~~~~~d~v~  146 (168)
                      ..+.+|+|+|+|.|--...++=     .+..|+.+|.++.-+...+    +.... .. +......+ .......||+|+
T Consensus        51 ~~~~~vLDiGcG~G~~~~~l~~-----~g~~v~gvD~S~~~i~~A~----~~~~~~~~~~~~~~~~~~~~~~~~~fD~V~  121 (227)
T 3e8s_A           51 RQPERVLDLGCGEGWLLRALAD-----RGIEAVGVDGDRTLVDAAR----AAGAGEVHLASYAQLAEAKVPVGKDYDLIC  121 (227)
T ss_dssp             TCCSEEEEETCTTCHHHHHHHT-----TTCEEEEEESCHHHHHHHH----HTCSSCEEECCHHHHHTTCSCCCCCEEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHHH-----CCCEEEEECCCHHHHHHHH----HHCCCCCCEEEEEECCCCCCCCCCCCCEEE
T ss_conf             8959899976898399999997-----6996999868178899999----860146512443301111224677714899


Q ss_pred             ECCC---CCHHHHHHHHHHHHCC
Q ss_conf             9147---9989999984885206
Q gi|254780807|r  147 ARAL---ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       147 sRA~---a~l~~ll~~~~pllk~  166 (168)
                      |..+   .++..++.-....||+
T Consensus       122 ~~~~l~~~d~~~~l~~~~r~Lkp  144 (227)
T 3e8s_A          122 ANFALLHQDIIELLSAMRTLLVP  144 (227)
T ss_dssp             EESCCCSSCCHHHHHHHHHTEEE
T ss_pred             EEEEEEECCHHHHHHHHHHHCCC
T ss_conf             96378608999999999998388


No 139
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=96.99  E-value=0.0045  Score=37.31  Aligned_cols=76  Identities=12%  Similarity=0.037  Sum_probs=55.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHH-HHHCCCCCCEEEE
Q ss_conf             344311111467733565652275546634787500003899999999973898--0998042665-3312479869999
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQE-APQMITTCDVISA  147 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~-~~~~~~~~d~v~s  147 (168)
                      ...+++|||.|.|.-.+-++-.+|+++   ++.+|- +--+...++.+.+.++.  ++++.+...+ .+.....||++++
T Consensus       179 ~~~~vlDvGgG~G~~~~~l~~~~p~~~---~~~~Dl-p~~~~~a~~~~~~~~l~~rv~~~~gd~~~~~~~~~~~~D~v~~  254 (352)
T 3mcz_A          179 RARTVIDLAGGHGTYLAQVLRRHPQLT---GQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVML  254 (352)
T ss_dssp             TCCEEEEETCTTCHHHHHHHHHCTTCE---EEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCCEEE---EEEEEC-HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
T ss_conf             799899988988799999997598348---999601-9999999999986388655257754411134566777636875


Q ss_pred             CCC
Q ss_conf             147
Q gi|254780807|r  148 RAL  150 (168)
Q Consensus       148 RA~  150 (168)
                      +.+
T Consensus       255 ~~v  257 (352)
T 3mcz_A          255 NDC  257 (352)
T ss_dssp             ESC
T ss_pred             CCE
T ss_conf             131


No 140
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=96.98  E-value=0.0015  Score=40.01  Aligned_cols=90  Identities=10%  Similarity=0.031  Sum_probs=59.9

Q ss_pred             HCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEE
Q ss_conf             00123443111114677335656522755466347875000038999999999738980998042665331247986999
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      .+.+++.+|+|+|+|.|.-.+++|=.     +..|+.+|.++.-+..   +.++ ..+..++++.+.+++. .++||.|+
T Consensus        36 ~~~~~~~~VLDiGcG~G~~~~~la~~-----g~~v~giD~S~~~l~~---a~~~-~~~~~~~~~d~~~~~~-~~~fD~v~  105 (239)
T 3bxo_A           36 SRTPEASSLLDVACGTGTHLEHFTKE-----FGDTAGLELSEDMLTH---ARKR-LPDATLHQGDMRDFRL-GRKFSAVV  105 (239)
T ss_dssp             HHCTTCCEEEEETCTTSHHHHHHHHH-----HSEEEEEESCHHHHHH---HHHH-CTTCEEEECCTTTCCC-SSCEEEEE
T ss_pred             HHCCCCCEEEEEECCCCHHHHHHHHC-----CCEEEEEECCHHHHHH---HHHC-CCCCCCCCCCCCCCCC-CCCCCHHE
T ss_conf             74899498999817584999999973-----9969999696788788---8633-6544223221126773-31432100


Q ss_pred             EC--C---CCCHH---HHHHHHHHHHCC
Q ss_conf             91--4---79989---999984885206
Q gi|254780807|r  147 AR--A---LADLD---TLLEYSFPWLYQ  166 (168)
Q Consensus       147 sR--A---~a~l~---~ll~~~~pllk~  166 (168)
                      +-  +   +...+   .++.-....||+
T Consensus       106 ~~~~s~~~l~~~~~~~~~l~~~~~~Lk~  133 (239)
T 3bxo_A          106 SMFSSVGYLKTTEELGAAVASFAEHLEP  133 (239)
T ss_dssp             ECTTGGGGCCSHHHHHHHHHHHHHTEEE
T ss_pred             EEHHHHHCCCCHHHHHHHHHHHHHHCCC
T ss_conf             1011012059988999999999986289


No 141
>3cc8_A Putative methyltransferase; NP_977653.1, structural genomics, joint center for structural genomics, JCSG; 1.64A {Bacillus cereus atcc 10987}
Probab=96.97  E-value=0.0014  Score=40.23  Aligned_cols=87  Identities=17%  Similarity=0.116  Sum_probs=56.7

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             23443111114677335656522755466347875000038999999999738980-99804266533124798699991
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      +++++|+|||+|.|-=...++    + .+..|+.+|.+.+-+...+     -.... .+.+..+.+.+...++||+|+|.
T Consensus        31 ~~~~~ILDIGcG~G~~~~~l~----~-~~~~v~giD~s~~~i~~a~-----~~~~~~~~~~~~~~~~~~~~~~fD~I~~~  100 (230)
T 3cc8_A           31 KEWKEVLDIGCSSGALGAAIK----E-NGTRVSGIEAFPEAAEQAK-----EKLDHVVLGDIETMDMPYEEEQFDCVIFG  100 (230)
T ss_dssp             TTCSEEEEETCTTSHHHHHHH----T-TTCEEEEEESSHHHHHHHH-----TTSSEEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred             CCCCEEEEECCCCCHHHHHHH----H-CCCEEEEEECCHHHHHHHH-----HCCCEEEEEHHHHHCCCCCCCCEEEEEEE
T ss_conf             579969995188869999999----7-5998999967256666654-----11312331010221388887863588740


Q ss_pred             CC----CCHHHHHHHHHHHHCC
Q ss_conf             47----9989999984885206
Q gi|254780807|r  149 AL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~----a~l~~ll~~~~pllk~  166 (168)
                      .+    .++..+++-....|++
T Consensus       101 ~vl~h~~d~~~~l~~i~~~Lkp  122 (230)
T 3cc8_A          101 DVLEHLFDPWAVIEKVKPYIKQ  122 (230)
T ss_dssp             SCGGGSSCHHHHHHHTGGGEEE
T ss_pred             EEEEECCCHHHHHHHHHHHCCC
T ss_conf             0555548868999999863386


No 142
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.95  E-value=0.0018  Score=39.63  Aligned_cols=91  Identities=18%  Similarity=0.085  Sum_probs=56.2

Q ss_pred             HCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEE
Q ss_conf             00123443111114677335656522755466347875000038999999999738980998042665331247986999
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS  146 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~  146 (168)
                      .+.+.+.+++|+|+|.|.-...++=.     +..|+.+|.++.-+.-.   .++. -+...+...++...-..+.||.|+
T Consensus        42 ~~~~~~~~vLDlGCG~G~~~~~l~~~-----~~~v~giD~s~~~i~~a---~~~~-~~~~~~~~~~~~~~~~~~~fD~v~  112 (195)
T 3cgg_A           42 AMAPRGAKILDAGCGQGRIGGYLSKQ-----GHDVLGTDLDPILIDYA---KQDF-PEARWVVGDLSVDQISETDFDLIV  112 (195)
T ss_dssp             HHSCTTCEEEEETCTTTHHHHHHHHT-----TCEEEEEESCHHHHHHH---HHHC-TTSEEEECCTTTSCCCCCCEEEEE
T ss_pred             HCCCCCCEEEEECCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHH---HHHC-CCCCEEECCCCCCCCCCCCCCEEE
T ss_conf             65899998999768885999999976-----99899997972778999---9730-254311024335656665325899


Q ss_pred             ECC-C---CC---HHHHHHHHHHHHCC
Q ss_conf             914-7---99---89999984885206
Q gi|254780807|r  147 ARA-L---AD---LDTLLEYSFPWLYQ  166 (168)
Q Consensus       147 sRA-~---a~---l~~ll~~~~pllk~  166 (168)
                      |.. +   -+   ...+++-....||+
T Consensus       113 ~~~~~~~~~~~~~~~~~l~~~~r~Lkp  139 (195)
T 3cgg_A          113 SAGNVMGFLAEDGREPALANIHRALGA  139 (195)
T ss_dssp             ECCCCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred             ECCHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             823034448857899999999998786


No 143
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51
Probab=96.69  E-value=0.0064  Score=36.45  Aligned_cols=94  Identities=9%  Similarity=0.022  Sum_probs=67.6

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC---CEEEECHHHHH----HHCCCC
Q ss_conf             12344311111467733565652275546634787500003899999999973898---09980426653----312479
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR---GKVFACRIQEA----PQMITT  141 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~---~~vi~~r~e~~----~~~~~~  141 (168)
                      ...+.+++|+.||.|=-|+..|..-    ..+|+.||.+...+...++-.+..+++   .+++.+.+.+.    .....+
T Consensus       210 ~~~g~rVLDlfs~tGgfsl~aa~~g----A~~V~~vD~s~~a~~~a~~N~~~N~l~~~~~~~~~~D~~~~L~~~~~~~~~  285 (385)
T 2b78_A          210 SAAGKTVLNLFSYTAAFSVAAAMGG----AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLT  285 (385)
T ss_dssp             TTBTCEEEEETCTTTHHHHHHHHTT----BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred             HCCCCCEEEECCCCCHHHHHHHHCC----CCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCC
T ss_conf             5599916863676878999998779----958885267699999999989984899764477726699999999864898


Q ss_pred             CCEEEE-------------CCCCCHHHHHHHHHHHHCC
Q ss_conf             869999-------------1479989999984885206
Q gi|254780807|r  142 CDVISA-------------RALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       142 ~d~v~s-------------RA~a~l~~ll~~~~pllk~  166 (168)
                      ||+|+.             +|......|+..+.++|++
T Consensus       286 fD~IilDPP~f~~~~~~~~~~~~~y~~L~~~a~~ll~~  323 (385)
T 2b78_A          286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSE  323 (385)
T ss_dssp             EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEE
T ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             88899898633588788999999999999999996289


No 144
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.15A {Nostoc punctiforme pcc 73102}
Probab=96.66  E-value=0.0044  Score=37.34  Aligned_cols=75  Identities=12%  Similarity=0.074  Sum_probs=55.7

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      .+.+++|||.|.|.-.+.++-.+|+++   ++.+|- ..-+...++.++..++.  ++++.+...+.+ ....||+|+++
T Consensus       165 ~~~~vLDvG~G~G~~~~~l~~~~p~~~---~~~~Dl-p~~~~~a~~~~~~~~l~~rv~~~~~d~~~~~-~~~~~D~v~~~  239 (335)
T 2r3s_A          165 EPLKVLDISASHGLFGIAVAQHNPNAE---IFGVDW-ASVLEVAKENARIQGVASRYHTIAGSAFEVD-YGNDYDLVLLP  239 (335)
T ss_dssp             CCSEEEEETCTTCHHHHHHHHHCTTCE---EEEEEC-HHHHHHHHHHHHHHTCGGGEEEEESCTTTSC-CCSCEEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCCCCC---EEEECC-HHHHHHHHHHHHHHCCCEEEEECCCCHHHCC-CCCCHHHHHHH
T ss_conf             898799979996299999998589877---377446-7888999987886087435653245332055-43313588863


Q ss_pred             CC
Q ss_conf             47
Q gi|254780807|r  149 AL  150 (168)
Q Consensus       149 A~  150 (168)
                      -+
T Consensus       240 ~v  241 (335)
T 2r3s_A          240 NF  241 (335)
T ss_dssp             SC
T ss_pred             HH
T ss_conf             00


No 145
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, S-adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum tls} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=96.65  E-value=0.011  Score=34.97  Aligned_cols=74  Identities=12%  Similarity=0.114  Sum_probs=54.6

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             34431111146773356565227554663478750000389999999997389--8099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+++|||.|.|.=.+-++=.+|+++   ++.+|. +.-+.-.++.+.+.++  +++++.+.+.+.  ....+|+|+.+
T Consensus       190 ~~~~vlDiG~G~G~~~~~l~~~~p~~~---~~~~Dl-p~~~~~a~~~~~~~~l~~rv~~~~gD~~~~--~~p~~D~v~~~  263 (359)
T 1x19_A          190 GVKKMIDVGGGIGDISAAMLKHFPELD---STILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPEADAVLFC  263 (359)
T ss_dssp             TCCEEEEESCTTCHHHHHHHHHCTTCE---EEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCCCSEEEEE
T ss_pred             CCCEEEECCCCCCHHHHHHHHHCCCEE---EEEECC-HHHHHHHHHHHHHCCCCCCCEEEECCHHHC--CCCCCCEEEEE
T ss_conf             787799767989799999998399228---998166-888999998667507763452783457763--57876504556


Q ss_pred             CC
Q ss_conf             47
Q gi|254780807|r  149 AL  150 (168)
Q Consensus       149 A~  150 (168)
                      -+
T Consensus       264 ~v  265 (359)
T 1x19_A          264 RI  265 (359)
T ss_dssp             SC
T ss_pred             EE
T ss_conf             30


No 146
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.61  E-value=0.003  Score=38.29  Aligned_cols=73  Identities=14%  Similarity=0.070  Sum_probs=53.9

Q ss_pred             CCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH--------HHHCCCC-EEEECHHHH-HHHC--C
Q ss_conf             44311111467733565652275546634787500003899999999--------9738980-998042665-3312--4
Q gi|254780807|r   72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV--------QKTAARG-KVFACRIQE-APQM--I  139 (168)
Q Consensus        72 ~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~--------~~L~L~~-~vi~~r~e~-~~~~--~  139 (168)
                      .-.++|||+|.|-=-+-+|..+|+..   +..+|...+.+.....-+        .+.+++| .++++.+.+ +.+.  .
T Consensus        50 ~p~iLeIGcG~G~~l~~lA~~~p~~~---~iGiEi~~~~v~~~~~ri~~~~~~~a~~~~l~Ni~~~~~da~~~l~~~~~~  126 (246)
T 2vdv_E           50 KVTIADIGCGFGGLMIDLSPAFPEDL---ILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK  126 (246)
T ss_dssp             CEEEEEETCTTSHHHHHHHHHSTTSE---EEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred             CCEEEEECCCCCHHHHHHHHHCCCCC---EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCC
T ss_conf             98799982689989999998689875---898850368999999999999874787749871999937348888875146


Q ss_pred             CCCCEEEE
Q ss_conf             79869999
Q gi|254780807|r  140 TTCDVISA  147 (168)
Q Consensus       140 ~~~d~v~s  147 (168)
                      ..+|.|..
T Consensus       127 ~s~d~v~i  134 (246)
T 2vdv_E          127 GQLSKMFF  134 (246)
T ss_dssp             TCEEEEEE
T ss_pred             CCCCEEEE
T ss_conf             77673489


No 147
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1- carboxylic acid, PHZM; 1.80A {Pseudomonas aeruginosa PAO1}
Probab=96.55  E-value=0.0025  Score=38.81  Aligned_cols=90  Identities=13%  Similarity=0.093  Sum_probs=60.1

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             34431111146773356565227554663478750000389999999997389--8099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      .+.+++|||.|.|.-.+.++-.+|+++   ++.+|- +.-+...++-+...++  ++++..+...+  +....||+|+.+
T Consensus       167 ~~~~vlDvG~G~G~~~~~l~~~~P~l~---~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~gd~~~--~~p~~~D~v~~~  240 (334)
T 2ip2_A          167 RGRSFVDVGGGSGELTKAILQAEPSAR---GVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ--EVPSNGDIYLLS  240 (334)
T ss_dssp             TTCEEEEETCTTCHHHHHHHHHCTTCE---EEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT--CCCSSCSEEEEE
T ss_pred             CCCEEEECCCCCCHHHHHHHHHCCCEE---EEEECC-CCHHHHHHHHHHHCCCCCEEEEECCCHHH--CCCCCCCEEEEE
T ss_conf             888673038987688888898699649---998228-51128998767650777706997177654--388757089996


Q ss_pred             CCC---CHH---HHHHHHHHHHCC
Q ss_conf             479---989---999984885206
Q gi|254780807|r  149 ALA---DLD---TLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a---~l~---~ll~~~~pllk~  166 (168)
                      .+-   +-+   .++.-+..-|++
T Consensus       241 ~vlh~~~d~~~~~iL~~~~~aL~p  264 (334)
T 2ip2_A          241 RIIGDLDEAASLRLLGNCREAMAG  264 (334)
T ss_dssp             SCGGGCCHHHHHHHHHHHHHHSCT
T ss_pred             EEECCCCHHHHHHHHHHHHHHHCC
T ss_conf             211158978999999999986089


No 148
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI- 2, protein structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.51  E-value=0.014  Score=34.53  Aligned_cols=93  Identities=14%  Similarity=0.128  Sum_probs=66.8

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC---CEEEECHHHHH-H---HCCCCC
Q ss_conf             2344311111467733565652275546634787500003899999999973898---09980426653-3---124798
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR---GKVFACRIQEA-P---QMITTC  142 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~---~~vi~~r~e~~-~---~~~~~~  142 (168)
                      ..+.+|+|+.+|.|--|+..|-.     +..|+.||.+++-+...++-.+..+++   .+.+++.+.+. .   ....+|
T Consensus       152 ~kg~rVLdlF~ytG~~sl~aa~~-----GA~V~~VD~s~~al~~a~~N~~lNg~~~~~~~~i~~Da~~~l~~~~~~g~~f  226 (332)
T 2igt_A          152 DRPLKVLNLFGYTGVASLVAAAA-----GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTY  226 (332)
T ss_dssp             SSCCEEEEETCTTCHHHHHHHHT-----TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCB
T ss_pred             CCCCEEEECCCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCC
T ss_conf             58975887267777789999978-----9849999387999999999999848988858999267999999999718997


Q ss_pred             CEEEEC--CC------------CCHHHHHHHHHHHHCCC
Q ss_conf             699991--47------------99899999848852067
Q gi|254780807|r  143 DVISAR--AL------------ADLDTLLEYSFPWLYQK  167 (168)
Q Consensus       143 d~v~sR--A~------------a~l~~ll~~~~pllk~k  167 (168)
                      |+|+.=  +|            ..++.++..+..++++.
T Consensus       227 D~IilDPP~f~~~~k~~~~~~~~~~~~l~~~~~~Ll~pg  265 (332)
T 2igt_A          227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPK  265 (332)
T ss_dssp             SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTT
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             689978964466742248899999999999999970699


No 149
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=96.49  E-value=0.018  Score=33.88  Aligned_cols=90  Identities=12%  Similarity=0.009  Sum_probs=60.3

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+++|||.|.|.-.+-++=.+|+++   ++.+|. +.-+...+..+...++.  +++......+  +....||+++.+
T Consensus       169 ~~~~vlDvGgG~G~~~~~l~~~~P~~~---~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~~~--~~p~~~D~~~~~  242 (332)
T 3i53_A          169 ALGHVVDVGGGSGGLLSALLTAHEDLS---GTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD--PLPAGAGGYVLS  242 (332)
T ss_dssp             GGSEEEEETCTTSHHHHHHHHHCTTCE---EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS--CCCCSCSEEEEE
T ss_pred             CCCEEEECCCCCCHHHHHHHHHCCCCE---EEEEEC-HHHHHHHHHHHHHCCCCCCEEEECCCCCC--CCCCCCCEEEEE
T ss_conf             674787528997699999999789986---999978-43899999875641678745773375123--589987389972


Q ss_pred             CCCC----H--HHHHHHHHHHHCC
Q ss_conf             4799----8--9999984885206
Q gi|254780807|r  149 ALAD----L--DTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a~----l--~~ll~~~~pllk~  166 (168)
                      .+-.    -  ..++.-+..-|++
T Consensus       243 ~vlh~~~d~~~~~iL~~~~~~L~p  266 (332)
T 3i53_A          243 AVLHDWDDLSAVAILRRCAEAAGS  266 (332)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             145678989999999999997599


No 150
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research, nysgxrc; 2.33A {Bacteroides vulgatus atcc 8482}
Probab=96.48  E-value=0.0038  Score=37.71  Aligned_cols=93  Identities=11%  Similarity=0.085  Sum_probs=56.9

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-C-CEEEECHHHHH-HHCCCCCCEEE
Q ss_conf             234431111146773356565227554663478750000389999999997389-8-09980426653-31247986999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R-GKVFACRIQEA-PQMITTCDVIS  146 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~-~~vi~~r~e~~-~~~~~~~d~v~  146 (168)
                      ....+++|||.|.|.=.+-++=.+|+.+   ++.+|...- +...+.-+..-++ + ++.+.+.+.+. ......||+++
T Consensus       178 ~~~~~vLDiG~G~G~~~~~la~~~p~~~---~~~~d~~~~-~~~~~~~~~~~~~~~rv~~~~~d~~~~~~~~~~~~d~~~  253 (363)
T 3dp7_A          178 HHPKRLLDIGGNTGKWATQCVQYNKEVE---VTIVDLPQQ-LEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVW  253 (363)
T ss_dssp             GCCSEEEEESCTTCHHHHHHHHHSTTCE---EEEEECHHH-HHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHCCCEE---EEEECCCHH-HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEE
T ss_conf             5899899979995299999998689739---999757116-799998876527877269997333356678999844897


Q ss_pred             ECCCC-CH-----HHHHHHHHHHHCC
Q ss_conf             91479-98-----9999984885206
Q gi|254780807|r  147 ARALA-DL-----DTLLEYSFPWLYQ  166 (168)
Q Consensus       147 sRA~a-~l-----~~ll~~~~pllk~  166 (168)
                      .+.+- .+     ..++.-...-|++
T Consensus       254 ~~~~l~~~~~~~~~~iL~~i~~~L~p  279 (363)
T 3dp7_A          254 MSQFLDCFSEEEVISILTRVAQSIGK  279 (363)
T ss_dssp             EESCSTTSCHHHHHHHHHHHHHHCCT
T ss_pred             EECHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             71012025614454579999966888


No 151
>1nw3_A Histone methyltransferase DOT1L; HDOT1, histone lysine methyltransferase,; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.31
Probab=96.48  E-value=0.013  Score=34.69  Aligned_cols=86  Identities=14%  Similarity=0.074  Sum_probs=58.8

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH-------CC---CCEEEECHHHHHH--H
Q ss_conf             2344311111467733565652275546634787500003899999999973-------89---8099804266533--1
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT-------AA---RGKVFACRIQEAP--Q  137 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L-------~L---~~~vi~~r~e~~~--~  137 (168)
                      +.+..++|+|+|.|-..+.+|-.+|..   .++.||-+...+..-+...+++       ++   +++++++.+.+.+  +
T Consensus       154 ~~~~~~~DiG~G~G~~~~~~a~~~~~~---~~~Giei~~~~~~~A~~~~~~~~~~~~~~g~~~~~v~~~~gD~~~~~~~~  230 (416)
T 1nw3_A          154 TDDDLFVDLGSGVGQVVLQVAAATNCK---HHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE  230 (416)
T ss_dssp             CTTCEEEEETCTTSHHHHHHHHHCCCS---EEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHHHHH
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
T ss_conf             999889966888888999999976998---89999799999999999999998877762677774599976656774100


Q ss_pred             CCCCCCEEEECCCCCHHHHHH
Q ss_conf             247986999914799899999
Q gi|254780807|r  138 MITTCDVISARALADLDTLLE  158 (168)
Q Consensus       138 ~~~~~d~v~sRA~a~l~~ll~  158 (168)
                      ....+|+|.+-.+.-.+.+..
T Consensus       231 ~~~~adVv~~n~~~f~~~l~~  251 (416)
T 1nw3_A          231 RIANTSVIFVNNFAFGPEVDH  251 (416)
T ss_dssp             HHHHCSEEEECCTTTCHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHH
T ss_conf             267985999987127766999


No 152
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA processing, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.42  E-value=0.0059  Score=36.62  Aligned_cols=75  Identities=11%  Similarity=0.063  Sum_probs=54.1

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH------CCCC-EEEECHHHH-HHHC--CC
Q ss_conf             344311111467733565652275546634787500003899999999973------8980-998042665-3312--47
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT------AARG-KVFACRIQE-APQM--IT  140 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L------~L~~-~vi~~r~e~-~~~~--~~  140 (168)
                      ....|+|||+|.|-=-+-+|..+|+..   +..+|-+.+.+.+....++.+      +++| .++++.+.+ +++.  ..
T Consensus        46 ~~~~iLeIGcG~G~~l~~lA~~~P~~~---~iGiei~~~~~~~~~~~~~~~~~~~~~~l~Nv~~~~~da~~~l~~~~~~~  122 (235)
T 3ckk_A           46 AQVEFADIGCGYGGLLVELSPLFPDTL---ILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG  122 (235)
T ss_dssp             CCEEEEEETCTTCHHHHHHGGGSTTSE---EEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred             CCCEEEEEECCCCHHHHHHHHHCCCCC---EEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCC
T ss_conf             898799982268699999998686872---89886135899999989999999987088569998544487766651355


Q ss_pred             CCCEEEEC
Q ss_conf             98699991
Q gi|254780807|r  141 TCDVISAR  148 (168)
Q Consensus       141 ~~d~v~sR  148 (168)
                      .+|.|..-
T Consensus       123 s~d~v~i~  130 (235)
T 3ckk_A          123 QLTKMFFL  130 (235)
T ss_dssp             CEEEEEEE
T ss_pred             CCHHCEEE
T ss_conf             40010576


No 153
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in europe; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=96.41  E-value=0.005  Score=37.03  Aligned_cols=75  Identities=16%  Similarity=0.096  Sum_probs=53.3

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+|+|||.|.|.=.+.++=.+|+++   ++.+|. ..-+...++.+.+.++.  ..++.....+  .....||+|+++
T Consensus       182 ~~~~vlDvG~G~G~~~~~l~~~~P~~~---~~~~D~-~~~~~~a~~~~~~~~~~~~i~~~~~d~~~--~~p~~~D~v~~~  255 (374)
T 1qzz_A          182 AVRHVLDVGGGNGGMLAAIALRAPHLR---GTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK--PLPVTADVVLLS  255 (374)
T ss_dssp             TCCEEEEETCTTSHHHHHHHHHCTTCE---EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS--CCSCCEEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCCCEE---EEEEEC-HHHHHHHHHHHHHCCCCCEEEEEECHHHH--CCCCCCCEEEEE
T ss_conf             687899979988788999999789728---999607-88899999998855886227887041443--189877489984


Q ss_pred             CCC
Q ss_conf             479
Q gi|254780807|r  149 ALA  151 (168)
Q Consensus       149 A~a  151 (168)
                      -+-
T Consensus       256 ~vl  258 (374)
T 1qzz_A          256 FVL  258 (374)
T ss_dssp             SCG
T ss_pred             EEE
T ss_conf             224


No 154
>2f8l_A Hypothetical protein LMO1582; 16411011, structural genomics, PSI, protein structure initiative, joint center for structural genomics; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.36  E-value=0.052  Score=31.19  Aligned_cols=76  Identities=8%  Similarity=0.015  Sum_probs=48.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCC----CCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEE
Q ss_conf             234431111146773356565227----5546634787500003899999999973898099804266533124798699
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQL----SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI  145 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~----p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v  145 (168)
                      +++.+|+|.|+|.|  ++.++++.    .......++.+|....-+...+.-....+.+..++++..... ....+||+|
T Consensus       129 ~~~~~vlDp~cGsG--~~l~~~~~~l~~~~~~~~~~~g~di~~~~~~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~i  205 (344)
T 2f8l_A          129 KKNVSILDPACGTA--NLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVV  205 (344)
T ss_dssp             CSEEEEEETTCTTS--HHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEE
T ss_pred             CCCCEEEECCCCCC--HHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHCCCCCCC-CCCCCCCCC
T ss_conf             99988995489966--899999999875367761899998999999999964000222123310011001-346776721


Q ss_pred             EEC
Q ss_conf             991
Q gi|254780807|r  146 SAR  148 (168)
Q Consensus       146 ~sR  148 (168)
                      ++-
T Consensus       206 v~N  208 (344)
T 2f8l_A          206 ISD  208 (344)
T ss_dssp             EEE
T ss_pred             CCC
T ss_conf             157


No 155
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, nucleus, phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=96.34  E-value=0.0053  Score=36.91  Aligned_cols=77  Identities=17%  Similarity=0.204  Sum_probs=51.2

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             01234431111146773356565227554663478750000389999999997389809980426653312479869999
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      ..+.+..|+|+|+|.|.    ++....+    .++.+|-..              .+..++.+.++.+|-..+.||+|++
T Consensus        64 ~~~~~~~IlDiGCG~G~----~~~~l~~----~v~~~D~~~--------------~~~~~~~~d~~~lp~~d~sfD~v~~  121 (215)
T 2zfu_A           64 QRPASLVVADFGCGDCR----LASSIRN----PVHCFDLAS--------------LDPRVTVCDMAQVPLEDESVDVAVF  121 (215)
T ss_dssp             TSCTTSCEEEETCTTCH----HHHHCCS----CEEEEESSC--------------SSTTEEESCTTSCSCCTTCEEEEEE
T ss_pred             HCCCCCEEEEECCCCCH----HHHHHCC----EEEEEECCC--------------CCCCEEECCCCCCCCCCCCCCEEEE
T ss_conf             06688879983278339----9986302----267730236--------------8860577243248888996897999


Q ss_pred             CCC---CCHHHHHHHHHHHHCC
Q ss_conf             147---9989999984885206
Q gi|254780807|r  148 RAL---ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA~---a~l~~ll~~~~pllk~  166 (168)
                      ..+   .+++..+.-+.+.||+
T Consensus       122 ~~~l~~~d~~~~l~E~~RvLkp  143 (215)
T 2zfu_A          122 CLSLMGTNIRDFLEEANRVLKP  143 (215)
T ss_dssp             ESCCCSSCHHHHHHHHHHHEEE
T ss_pred             ECCEECCCHHHHHHHHHHHCCC
T ss_conf             7310458989999999985389


No 156
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, tRNA processing; HET: SAM; 1.50A {Escherichia coli K12} PDB: 3dxx_A* 3dxz_A*
Probab=96.32  E-value=0.0085  Score=35.72  Aligned_cols=81  Identities=9%  Similarity=0.010  Sum_probs=61.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHH-HHH--CCCCCCEEE
Q ss_conf             3443111114677335656522755466347875000038999999999738980-998042665-331--247986999
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQ--MITTCDVIS  146 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~-~~~--~~~~~d~v~  146 (168)
                      ....++|||+|.|-=-+-+|..+|+..   +..+|.+.+.+.-...-+.+.+++| .++++.+.+ +..  ....+|.|.
T Consensus        34 ~~pliLEIGcG~G~~l~~~A~~~P~~~---~iGiEi~~~~v~~a~~~~~~~~l~Ni~~~~~da~~~l~~~~~~~s~d~I~  110 (218)
T 3dxy_A           34 EAPVTLEIGFGMGASLVAMAKDRPEQD---FLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQ  110 (218)
T ss_dssp             CCCEEEEESCTTCHHHHHHHHHCTTSE---EEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCCCCC---EEEEEEECCCEEEEHHHCCHHHHCCCCEECCCHHHHHHHHCCCCCCCCCE
T ss_conf             995399972688899999999689998---89999723505530321201210455056453899998752456454432


Q ss_pred             ECCCCCHH
Q ss_conf             91479989
Q gi|254780807|r  147 ARALADLD  154 (168)
Q Consensus       147 sRA~a~l~  154 (168)
                      .=-=-|++
T Consensus       111 i~FPDPWp  118 (218)
T 3dxy_A          111 LFFPDPWH  118 (218)
T ss_dssp             EESCCCCC
T ss_pred             ECCCCCCC
T ss_conf             31688777


No 157
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=96.18  E-value=0.018  Score=33.87  Aligned_cols=77  Identities=16%  Similarity=0.129  Sum_probs=58.4

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHH------------
Q ss_conf             3443111114677335656522755466347875000038999999999738980-998042665331------------
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ------------  137 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~------------  137 (168)
                      .+..++|+-+|.|.=|++||=.     ...|+.||.+.--+.-.++-++..+++| ..+++++|++.+            
T Consensus       213 ~~~~vlDLycG~Gt~sl~La~~-----~~~V~gvE~~~~av~~A~~Na~~n~i~N~~f~~~~a~~~~~~~~~~~~~~~~~  287 (369)
T 3bt7_A          213 SKGDLLELYCGNGNFSLALARN-----FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQ  287 (369)
T ss_dssp             CCSEEEEESCTTSHHHHHHGGG-----SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred             CCCEEEECCCCCCHHHHHHHHC-----CCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf             7764887378965889998730-----85788999702678999999997598871899725999998876314566530


Q ss_pred             ----CCCCCCEEEE---CCCCC
Q ss_conf             ----2479869999---14799
Q gi|254780807|r  138 ----MITTCDVISA---RALAD  152 (168)
Q Consensus       138 ----~~~~~d~v~s---RA~a~  152 (168)
                          ...++|+|+-   |+=+.
T Consensus       288 ~~~~~~~~~d~vilDPPR~Gl~  309 (369)
T 3bt7_A          288 GIDLKSYQCETIFVDPPRSGLD  309 (369)
T ss_dssp             GSCGGGCCEEEEEECCCTTCCC
T ss_pred             CCCHHCCCCCEEEECCCCCCCH
T ss_conf             2310126587799897962518


No 158
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural genomics consortium, SGC; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.06  E-value=0.018  Score=33.85  Aligned_cols=101  Identities=18%  Similarity=0.120  Sum_probs=62.1

Q ss_pred             HHHHHHHC--CCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHC----------C--CC
Q ss_conf             35643100--123443111114677335656522-755466347875000038999999999738----------9--80
Q gi|254780807|r   61 DSLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTA----------A--RG  125 (168)
Q Consensus        61 DSl~~~~~--~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~----------L--~~  125 (168)
                      |+.+++..  +..+.+|+|+|||.|.-.+.||=+ .|+   ++|+.+|.++..+...++-++..+          .  ++
T Consensus        93 D~a~Il~~l~I~PG~rVLE~GtGsG~lt~~LAr~vgp~---G~V~~~D~~~~~~~~Ar~n~~~~~~~~~~~~~~~~~~~v  169 (336)
T 2b25_A           93 DINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQ---GRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV  169 (336)
T ss_dssp             HHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTT---CEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCE
T ss_pred             HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCC---CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             89999998589999889983537779999999962898---489984399999999999999743200012211367707


Q ss_pred             EEEECHHHHHHH--CCCCCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf             998042665331--2479869999147998999998488520
Q gi|254780807|r  126 KVFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLY  165 (168)
Q Consensus       126 ~vi~~r~e~~~~--~~~~~d~v~sRA~a~l~~ll~~~~pllk  165 (168)
                      .+++..+.+...  ....||.|+-=--.|+. .++-+.+.||
T Consensus       170 ~~~~~di~~~~~~~~~~~~D~VfLDlp~P~~-~l~~~~r~LK  210 (336)
T 2b25_A          170 DFIHKDISGATEDIKSLTFDAVALDMLNPHV-TLPVFYPHLK  210 (336)
T ss_dssp             EEEESCTTCCC-------EEEEEECSSSTTT-THHHHGGGEE
T ss_pred             EEEECCHHHCCCCCCCCCCCEEECCCCCHHH-HHHHHHHHCC
T ss_conf             9997766652355688753331046769899-9999998466


No 159
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.02  E-value=0.021  Score=33.45  Aligned_cols=85  Identities=16%  Similarity=0.174  Sum_probs=54.6

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC----------CC--EEEECHHHH--H
Q ss_conf             234431111146773356565227554663478750000389999999997389----------80--998042665--3
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA----------RG--KVFACRIQE--A  135 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L----------~~--~vi~~r~e~--~  135 (168)
                      ..+..++|+|+|.|-.-+.+|-.++..   .++.||-+..-+.+-++..++.+.          ..  .+..+-+++  +
T Consensus       241 kpgd~fLDLGCG~G~vvl~aA~~~g~~---~viGIDis~~~l~~A~~~~~e~~~~~~~~~~~~~~~~l~~~~~f~~~~~~  317 (433)
T 1u2z_A          241 KKGDTFMDLGSGVGNCVVQAALECGCA---LSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRV  317 (433)
T ss_dssp             CTTCEEEEESCTTSHHHHHHHHHHCCS---EEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHH
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCC
T ss_conf             999989974899989999999975998---79999799999999999999988776663034777526898361423753


Q ss_pred             HHCCCCCCEEEECCCCCHHHHH
Q ss_conf             3124798699991479989999
Q gi|254780807|r  136 PQMITTCDVISARALADLDTLL  157 (168)
Q Consensus       136 ~~~~~~~d~v~sRA~a~l~~ll  157 (168)
                      ......+|+|++-.+.-.+.+.
T Consensus       318 ~~~l~~adVV~inn~~f~~dl~  339 (433)
T 1u2z_A          318 AELIPQCDVILVNNFLFDEDLN  339 (433)
T ss_dssp             HHHGGGCSEEEECCTTCCHHHH
T ss_pred             CCCCCCCCEEEECCCCCCHHHH
T ss_conf             1245676289982502766688


No 160
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.01  E-value=0.051  Score=31.22  Aligned_cols=72  Identities=14%  Similarity=0.022  Sum_probs=56.8

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHH----HHCCCCCCEE
Q ss_conf             3443111114677335656522755466347875000038999999999738980-9980426653----3124798699
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA----PQMITTCDVI  145 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~----~~~~~~~d~v  145 (168)
                      .+..++|+-+|.|.=|++||=.     ..+|+.||.+.--+...+.-++..+++| +.+++++++.    +....++|+|
T Consensus       286 ~~~~vlDLYcG~G~fsl~La~~-----~~~V~gvE~~~~Av~~A~~na~~n~~~n~~f~~~~~~~~~~~~~~~~~~~d~v  360 (433)
T 1uwv_A          286 PEDRVLDLFCGMGNFTLPLATQ-----AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV  360 (433)
T ss_dssp             TTCEEEEESCTTTTTHHHHHTT-----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHH-----CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCEE
T ss_conf             8877999568851777876650-----56245663549999999999998499756999147566644306652799989


Q ss_pred             EE
Q ss_conf             99
Q gi|254780807|r  146 SA  147 (168)
Q Consensus       146 ~s  147 (168)
                      +-
T Consensus       361 il  362 (433)
T 1uwv_A          361 LL  362 (433)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             98


No 161
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural genomics, joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=96.01  E-value=0.014  Score=34.50  Aligned_cols=91  Identities=14%  Similarity=-0.077  Sum_probs=58.1

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHHHHHH-----CCCC
Q ss_conf             01234431111146773356565227554663478750000389999999997389-80998042665331-----2479
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ-----MITT  141 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e~~~~-----~~~~  141 (168)
                      +.+.+.+++|+|+|.|.-...+|=..     ..|+.+|.++.-+...+   ++..- +.+.....+++...     ....
T Consensus        53 ~~~~~~~vLDvGCG~G~~~~~la~~g-----~~v~gvD~s~~~i~~Ar---~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  124 (245)
T 3ggd_A           53 LFNPELPLIDFACGNGTQTKFLSQFF-----PRVIGLDVSKSALEIAA---KENTAANISYRLLDGLVPEQAAQIHSEIG  124 (245)
T ss_dssp             TSCTTSCEEEETCTTSHHHHHHHHHS-----SCEEEEESCHHHHHHHH---HHSCCTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred             HCCCCCEEEEECCCCCHHHHHHHCCC-----CEEEEEECCHHHHHHHH---HHCCCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf             06999858997587978799976378-----45998509999999999---86746750699950136532222245667


Q ss_pred             CCEEEECCCC------CHHHHHHHHHHHHCC
Q ss_conf             8699991479------989999984885206
Q gi|254780807|r  142 CDVISARALA------DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       142 ~d~v~sRA~a------~l~~ll~~~~pllk~  166 (168)
                      +++|++.++-      ....+++-...+||+
T Consensus       125 d~~V~~~~~l~~l~~~d~~~~l~~~~r~Lkp  155 (245)
T 3ggd_A          125 DANIYMRTGFHHIPVEKRELLGQSLRILLGK  155 (245)
T ss_dssp             SCEEEEESSSTTSCGGGHHHHHHHHHHHHTT
T ss_pred             CEEEEEEECHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             7799996222118817899999999988799


No 162
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.95  E-value=0.0094  Score=35.48  Aligned_cols=87  Identities=15%  Similarity=0.054  Sum_probs=53.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC-CC-CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             3443111114677335656522755466347875000038999999999738-98-099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-AR-GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~-L~-~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+++|||+|.|.-...|+=     ...+|+.+|.+..-+...+   ++.. .. ....+..+.+... .++||+|++-
T Consensus        51 ~~~~vLDvGcG~G~~~~~la~-----~~~~v~gvD~s~~~l~~a~---~~~~~~~~i~~~~~d~~~~~~-~~~fD~V~~~  121 (216)
T 3ofk_A           51 AVSNGLEIGCAAGAFTEKLAP-----HCKRLTVIDVMPRAIGRAC---QRTKRWSHISWAATDILQFST-AELFDLIVVA  121 (216)
T ss_dssp             SEEEEEEECCTTSHHHHHHGG-----GEEEEEEEESCHHHHHHHH---HHTTTCSSEEEEECCTTTCCC-SCCEEEEEEE
T ss_pred             CCCEEEEEECCCCHHHHHHHH-----HCCEEEEEECCHHHHHHHH---HHHCCCCEEECCCCCHHHHCC-CCCCCEEEEC
T ss_conf             999099963889899999997-----0998999969989999999---861546223101020223235-7871489984


Q ss_pred             CCC----CHH---HHHHHHHHHHCC
Q ss_conf             479----989---999984885206
Q gi|254780807|r  149 ALA----DLD---TLLEYSFPWLYQ  166 (168)
Q Consensus       149 A~a----~l~---~ll~~~~pllk~  166 (168)
                      .+-    +..   .+++-....||+
T Consensus       122 ~vl~~~~~~~~~~~~l~~~~~~L~p  146 (216)
T 3ofk_A          122 EVLYYLEDMTQMRTAIDNMVKMLAP  146 (216)
T ss_dssp             SCGGGSSSHHHHHHHHHHHHHTEEE
T ss_pred             CCHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf             5577589989999999999987798


No 163
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=95.90  E-value=0.014  Score=34.55  Aligned_cols=51  Identities=16%  Similarity=0.139  Sum_probs=35.5

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC
Q ss_conf             2344311111467733565652275546634787500003899999999973898
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR  124 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~  124 (168)
                      .++.+++|+|+|.|.-.+.+|-    .....|+.+|-++.-+...++-++.-+..
T Consensus        54 ~~g~~vLDlGCG~G~~~~~~a~----~~~~~V~giD~S~~~i~~a~~~~~~~~~~  104 (263)
T 2a14_A           54 LQGDTLIDIGSGPTIYQVLAAC----DSFQDITLSDFTDRNREELEKWLKKEPGA  104 (263)
T ss_dssp             CCEEEEEESSCTTCCGGGTTGG----GTEEEEEEEESCHHHHHHHHHHHHTCTTC
T ss_pred             CCCCEEEEECCCCCHHHHHHHH----HCCCEEEEECCCHHHHHHHHHHHHHCCCC
T ss_conf             8998899978886289999998----47976899518999999999999865765


No 164
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A*
Probab=95.75  E-value=0.0098  Score=35.36  Aligned_cols=68  Identities=18%  Similarity=0.220  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHH-HHHC-CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC
Q ss_conf             998986463564-3100-12344311111467733565652275546634787500003899999999973898
Q gi|254780807|r   53 DFWIRHVEDSLR-VFQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR  124 (168)
Q Consensus        53 ~~~~rHi~DSl~-~~~~-~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~  124 (168)
                      ..+.+++...+. ++.. ..++.+++|+|+|.|...+.++--    ....|+.+|-++.-+...++-++..++.
T Consensus        36 ~~~~~~~~~~l~~~~~~~~~~g~~vLDlGCG~G~~~~~l~~~----~~~~V~giD~S~~~i~~a~~~~~~~~~~  105 (265)
T 2i62_A           36 NEILRHLLKNLFKIFCLGAVKGELLIDIGSGPTIYQLLSACE----SFTEIIVSDYTDQNLWELQKWLKKEPGA  105 (265)
T ss_dssp             HHHHHHHHHHHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGG----TEEEEEEEESCHHHHHHHHHHHTTCTTC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHH----CCCEEEEECCCHHHHHHHHHHHHHCCCC
T ss_conf             788899999999972788888988999678776769999972----1998999569999999999998754776


No 165
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=95.71  E-value=0.032  Score=32.36  Aligned_cols=77  Identities=10%  Similarity=0.025  Sum_probs=56.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHH---HCCCCCCEEE
Q ss_conf             3443111114677335656522755466347875000038999999999738980-99804266533---1247986999
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMITTCDVIS  146 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~---~~~~~~d~v~  146 (168)
                      .+..|+|+.+|.|=-..-||-...+  ...++.+|.+.+|+.-+++..+++|+++ .+++.......   ....+||.|.
T Consensus       102 ~g~~VLD~CAapGgKt~~la~l~~~--~~~i~a~D~~~~Rl~~l~~~~~r~g~~~v~~~~~d~~~~~~~~~~~~~fd~Il  179 (309)
T 2b9e_A          102 PGSHVIDACAAPGNKTSHLAALLKN--QGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL  179 (309)
T ss_dssp             TTCEEEESSCTTCHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCEEEEE
T ss_conf             9994999678965799999987258--96699980878889999876775087349997042444443344455113999


Q ss_pred             ECC
Q ss_conf             914
Q gi|254780807|r  147 ARA  149 (168)
Q Consensus       147 sRA  149 (168)
                      .-|
T Consensus       180 vDa  182 (309)
T 2b9e_A          180 LDP  182 (309)
T ss_dssp             ECC
T ss_pred             ECC
T ss_conf             328


No 166
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferase; tRNA modification enzyme, guanine 26, N(2),N(2)- dimethyltransferase; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=95.67  E-value=0.083  Score=30.01  Aligned_cols=93  Identities=13%  Similarity=0.076  Sum_probs=71.1

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC----------------EEEECHHHH
Q ss_conf             3443111114677335656522755466347875000038999999999738980----------------998042665
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----------------KVFACRIQE  134 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~----------------~vi~~r~e~  134 (168)
                      .+.+++|..||.|.=||-.|.-.+-   .+|+++|.+..-+..++.-++..++.+                .+.+..+..
T Consensus        47 ~~~~iLD~~sasG~r~iRya~E~~~---~~V~~nDi~~~A~~~i~~N~~~N~~~~~~~~~~~~~~~~~~~~~~~~~Da~~  123 (378)
T 2dul_A           47 NPKIVLDALSATGIRGIRFALETPA---EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANR  123 (378)
T ss_dssp             CCSEEEESSCTTSHHHHHHHHHSSC---SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHH
T ss_pred             CCCEEEECCCCCHHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHH
T ss_conf             9998999788722999999985899---8899996998999999999997086533433343322455436752112788


Q ss_pred             H-HHCCCCCCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             3-3124798699991479989999984885206
Q gi|254780807|r  135 A-PQMITTCDVISARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       135 ~-~~~~~~~d~v~sRA~a~l~~ll~~~~pllk~  166 (168)
                      + .+....||+|--=.|++...+++-+..-++.
T Consensus       124 ~~~~~~~~~DvIDiDPfGsp~pfldsA~~a~~~  156 (378)
T 2dul_A          124 LMAERHRYFHFIDLDPFGSPMEFLDTALRSAKR  156 (378)
T ss_dssp             HHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEE
T ss_pred             HHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCC
T ss_conf             987447877433138999818999999997055


No 167
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=95.65  E-value=0.036  Score=32.07  Aligned_cols=92  Identities=15%  Similarity=0.077  Sum_probs=58.4

Q ss_pred             HHHHHHHHHH---HHHCCCCCCCCEEECCCCC-HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC----CCE
Q ss_conf             8986463564---3100123443111114677-3356565227554663478750000389999999997389----809
Q gi|254780807|r   55 WIRHVEDSLR---VFQLHPYPSIWIDLGSGGG-FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA----RGK  126 (168)
Q Consensus        55 ~~rHi~DSl~---~~~~~~~~~~ilDiGSGaG-fPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L----~~~  126 (168)
                      |.|.+...+.   .....+...+++++|.|+| +|.- ++-.+|..   .++.||-...-+...++   .+++    +..
T Consensus        70 Y~r~m~~~~~~~~~~~~~~~p~rvL~lG~G~g~l~r~-l~~~~P~~---~v~~VEidp~vi~~ar~---~f~~~~~~rv~  142 (317)
T 3gjy_A           70 YMRWIATGARAFIDAHQDASKLRITHLGGGACTMARY-FADVYPQS---RNTVVELDAELARLSRE---WFDIPRAPRVK  142 (317)
T ss_dssp             HHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHH-HHHHSTTC---EEEEEESCHHHHHHHHH---HSCCCCTTTEE
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHH-HHHHCCCC---EEEEEECCHHHHHHHHH---HCCCCCCCCEE
T ss_conf             9999999887502124699887799989968999999-99978998---69999798899999998---67998899768


Q ss_pred             EEECHHHHH-HH-CCCCCCEEEECCCCCH
Q ss_conf             980426653-31-2479869999147998
Q gi|254780807|r  127 VFACRIQEA-PQ-MITTCDVISARALADL  153 (168)
Q Consensus       127 vi~~r~e~~-~~-~~~~~d~v~sRA~a~l  153 (168)
                      ++.+.+.+. .. ...+||+|+.=+|.+.
T Consensus       143 v~~~Da~~~l~~~~~~~~D~Iv~D~f~~~  171 (317)
T 3gjy_A          143 IRVDDARMVAESFTPASRDVIIRDVFAGA  171 (317)
T ss_dssp             EEESCHHHHHHTCCTTCEEEEEECCSTTS
T ss_pred             EEECCHHHHHHHCCCCCCCEEEEECCCCC
T ss_conf             99784999997505578877999578876


No 168
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.65  E-value=0.045  Score=31.51  Aligned_cols=74  Identities=15%  Similarity=0.134  Sum_probs=53.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+++|||.|.|.=.+-++=.+|+++   ++++|- +.-+.-.++.+.+.++.  +++......+  .....+|+++.+
T Consensus       202 ~~~~vlDvGgG~G~~~~~l~~~~P~l~---~~~~Dl-p~v~~~a~~~~~~~~~~~ri~~~~~d~f~--~~p~~~D~~~l~  275 (369)
T 3gwz_A          202 GAATAVDIGGGRGSLMAAVLDAFPGLR---GTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE--TIPDGADVYLIK  275 (369)
T ss_dssp             TCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT--CCCSSCSEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHCCCCE---EEEEEC-HHHHHHHHHHHHHCCCCCCEEEECCCCCC--CCCCCCEEEEEE
T ss_conf             786798857888889999999789986---999989-68889999877751777523685263233--589886099980


Q ss_pred             CC
Q ss_conf             47
Q gi|254780807|r  149 AL  150 (168)
Q Consensus       149 A~  150 (168)
                      -+
T Consensus       276 ~v  277 (369)
T 3gwz_A          276 HV  277 (369)
T ss_dssp             SC
T ss_pred             CC
T ss_conf             43


No 169
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein structure initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=95.63  E-value=0.042  Score=31.70  Aligned_cols=75  Identities=17%  Similarity=0.109  Sum_probs=56.1

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC--CC-CEEEECHHHHH-HHC-CCCC
Q ss_conf             0123443111114677335656522755466347875000038999999999738--98-09980426653-312-4798
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--AR-GKVFACRIQEA-PQM-ITTC  142 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~--L~-~~vi~~r~e~~-~~~-~~~~  142 (168)
                      .+..+.+++|+|+|-|.=++.+|=.     ...|+.||...-.+...++-...++  .. .+++++.+++. ... ...|
T Consensus        90 ~~~~g~~v~Dl~cG~G~da~alA~~-----~~~V~~vE~d~~~~~~A~~N~~~~~~~~~~v~~~~~D~~~~l~~~~~~~~  164 (410)
T 3ll7_A           90 FIREGTKVVDLTGGLGIDFIALMSK-----ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHP  164 (410)
T ss_dssp             GSCTTCEEEESSCSSSHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCC
T ss_pred             HCCCCCEEEECCCCHHHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCC
T ss_conf             4679998998788667999999963-----99899995899999999984898726788269996668888753467778


Q ss_pred             CEEEE
Q ss_conf             69999
Q gi|254780807|r  143 DVISA  147 (168)
Q Consensus       143 d~v~s  147 (168)
                      |+|..
T Consensus       165 d~v~~  169 (410)
T 3ll7_A          165 DYIYV  169 (410)
T ss_dssp             SEEEE
T ss_pred             CEEEE
T ss_conf             88997


No 170
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=95.49  E-value=0.054  Score=31.07  Aligned_cols=85  Identities=18%  Similarity=0.103  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC---EEEECHH
Q ss_conf             9864635643100123443111114677335656522755466347875000038999999999738980---9980426
Q gi|254780807|r   56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG---KVFACRI  132 (168)
Q Consensus        56 ~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~---~vi~~r~  132 (168)
                      ..-+.+.|...   -.+..++|+.+|.|-=|+= |+-   .....|++||.+.+-++.++.-+..+++.+   .+.+..+
T Consensus        41 realFn~l~~~---~~~~~~LDLFaGSG~lglE-AlS---RGA~~v~fVE~~~~a~~~l~~N~~~l~~~~~~~~~~~~d~  113 (201)
T 2ift_A           41 KETLFNWLMPY---IHQSECLDGFAGSGSLGFE-ALS---RQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSS  113 (201)
T ss_dssp             HHHHHHHHHHH---HTTCEEEETTCTTCHHHHH-HHH---TTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCH
T ss_pred             HHHHHHHHHHH---CCCCEEEECCCCCCHHHHH-HHH---CCCCEEEEEEECHHHHHHHHHHHHHHCCCCCHHEEEEHHH
T ss_conf             99999987764---2998799878882898999-998---8993999997405577899999998386632002320345


Q ss_pred             HHHH---HCCCCCCEEEE
Q ss_conf             6533---12479869999
Q gi|254780807|r  133 QEAP---QMITTCDVISA  147 (168)
Q Consensus       133 e~~~---~~~~~~d~v~s  147 (168)
                      ....   ....+||+|.+
T Consensus       114 ~~~l~~~~~~~~fDlIFl  131 (201)
T 2ift_A          114 LDFLKQPQNQPHFDVVFL  131 (201)
T ss_dssp             HHHTTSCCSSCCEEEEEE
T ss_pred             HHHHHHCCCCCCCCEEEE
T ss_conf             655430024676655885


No 171
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A*
Probab=95.44  E-value=0.047  Score=31.44  Aligned_cols=65  Identities=15%  Similarity=0.073  Sum_probs=47.8

Q ss_pred             CCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHH----HCCC-CEEEECHHHHHHHCC
Q ss_conf             4431111146773356565227554663478750000389999999997----3898-099804266533124
Q gi|254780807|r   72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK----TAAR-GKVFACRIQEAPQMI  139 (168)
Q Consensus        72 ~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~----L~L~-~~vi~~r~e~~~~~~  139 (168)
                      +..++|||+|.|.-...+|-..|+..   |+.||.++....+.+.-..+    .+.. .....+.+++++...
T Consensus        25 ~~~vLDvGcG~G~~~~~la~~~p~~~---vvGvD~s~~~l~~a~~~~~~~~~~~~~~~v~~~~~d~~~lp~~~   94 (225)
T 3p2e_A           25 DRVHIDLGTGDGRNIYKLAINDQNTF---YIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFEL   94 (225)
T ss_dssp             SEEEEEETCTTSHHHHHHHHTCTTEE---EEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGG
T ss_pred             CCEEEEEEEECCHHHHHHHHHCCCCE---EEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCCC
T ss_conf             99899922767399999998689978---99986788999999988887544037864333205174498430


No 172
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.13  E-value=0.066  Score=30.58  Aligned_cols=75  Identities=13%  Similarity=0.111  Sum_probs=53.0

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+++|||.|.|.-.+-++=.+|+++   ++.+|- +.-+...+..+..-++.  ++++.....+  .....||+++.+
T Consensus       183 ~~~~vlDvGgG~G~~~~~l~~~~p~~~---~~~~D~-p~~~~~a~~~~~~~~l~~ri~~~~~d~~~--~~p~~~D~v~~~  256 (360)
T 1tw3_A          183 NVRHVLDVGGGKGGFAAAIARRAPHVS---ATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE--PLPRKADAIILS  256 (360)
T ss_dssp             TCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS--CCSSCEEEEEEE
T ss_pred             CCCEEEECCCCCCHHHHHHHHHCCCEE---EEEEEC-HHHHHHHHHHHHHCCCCCCCEEECCCHHH--CCCCCCCEEEEE
T ss_conf             575798638998688999997589448---999888-41479999999862887434351376754--278767489873


Q ss_pred             CCC
Q ss_conf             479
Q gi|254780807|r  149 ALA  151 (168)
Q Consensus       149 A~a  151 (168)
                      .+-
T Consensus       257 ~vl  259 (360)
T 1tw3_A          257 FVL  259 (360)
T ss_dssp             SCG
T ss_pred             EEE
T ss_conf             477


No 173
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assembly S-adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=94.99  E-value=0.12  Score=29.13  Aligned_cols=72  Identities=10%  Similarity=0.114  Sum_probs=47.2

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             234431111146773356565227554663478750000389999999997389809980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      ..+..|++||.|-|.  +-.+++.   ....|++||...+=+.+|+..... .-+.+++++.+..+.......+.|++
T Consensus        49 ~~~d~VlEIGpG~G~--LT~~Ll~---~~~~v~aiEiD~~l~~~L~~~~~~-~~n~~ii~~D~l~~d~~~~~~~~vv~  120 (295)
T 3gru_A           49 TKDDVVLEIGLGKGI--LTEELAK---NAKKVYVIEIDKSLEPYANKLKEL-YNNIEIIWGDALKVDLNKLDFNKVVA  120 (295)
T ss_dssp             CTTCEEEEECCTTSH--HHHHHHH---HSSEEEEEESCGGGHHHHHHHHHH-CSSEEEEESCTTTSCGGGSCCSEEEE
T ss_pred             CCCCEEEEECCCHHH--HHHHHHH---CCCCEEEEEECHHHHHHHHHHHHH-CCCEEEEECCCCCCCHHHCCCCEEEE
T ss_conf             999959997997469--9999981---689669999887999999976764-27736885121037713337553786


No 174
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=94.77  E-value=0.024  Score=33.12  Aligned_cols=91  Identities=10%  Similarity=-0.116  Sum_probs=56.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-------------CEEEECHHHHHH
Q ss_conf             2344311111467733565652275546634787500003899999999973898-------------099804266533
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-------------GKVFACRIQEAP  136 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-------------~~vi~~r~e~~~  136 (168)
                      ..+.+|+|+|+|.|--...||=     ++..|+.+|.++.-+...++-....++.             .+..+....++.
T Consensus        21 ~~g~rVLD~GCG~G~~~~~La~-----~g~~v~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   95 (203)
T 1pjz_A           21 VPGARVLVPLCGKSQDMSWLSG-----QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   95 (203)
T ss_dssp             CTTCEEEETTTCCSHHHHHHHH-----HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CCCCEEEEECCCCCHHHHHHHH-----CCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEEEHHCCC
T ss_conf             9999799973789888999996-----79877885265999999999723455320001111002323689983011166


Q ss_pred             -HCCCCCCEEEECCCC------CHHHHHHHHHHHHC
Q ss_conf             -124798699991479------98999998488520
Q gi|254780807|r  137 -QMITTCDVISARALA------DLDTLLEYSFPWLY  165 (168)
Q Consensus       137 -~~~~~~d~v~sRA~a------~l~~ll~~~~pllk  165 (168)
                       .....||.+.++.+-      .....++-....||
T Consensus        96 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~L~  131 (203)
T 1pjz_A           96 ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMP  131 (203)
T ss_dssp             HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCCCEEEEEEEHHHCCHHHHHHHHHHHHHHCC
T ss_conf             322456217999850432697888899999998578


No 175
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus HB8} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=94.66  E-value=0.14  Score=28.71  Aligned_cols=77  Identities=17%  Similarity=0.028  Sum_probs=59.8

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH-HCCCCCCEEEECC
Q ss_conf             344311111467733565652275546634787500003899999999973898099804266533-1247986999914
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP-QMITTCDVISARA  149 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~-~~~~~~d~v~sRA  149 (168)
                      .+.+|+|+.++.|-=..-||=...+  ...++..|.+.+|+.-|..-.++++.++.+.+.....+. .....||.|..-|
T Consensus       101 ~g~~VLDlCAAPGGKt~~la~~l~~--~g~l~and~~~~R~~~l~~nl~r~g~~~~v~~~d~~~l~~~~~~~fD~ILvDa  178 (464)
T 3m6w_A          101 PGERVLDLAAAPGGKTTHLAARMGG--KGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA  178 (464)
T ss_dssp             TTCEEEESSCTTCHHHHHHHHHTTT--CSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHC--CCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCEEEECC
T ss_conf             9997988365876559999988535--83576224317888889888886188616872322433204666443798448


No 176
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=94.61  E-value=0.18  Score=28.04  Aligned_cols=77  Identities=12%  Similarity=0.101  Sum_probs=58.7

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEECC
Q ss_conf             3443111114677335656522755466347875000038999999999738980-998042665331247986999914
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARA  149 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~sRA  149 (168)
                      .+..|+|+.+|.|==..-++=..++  .+.++..|.+.+|+.-|+...++++..+ .+.+......+.....||.|..-|
T Consensus       118 ~g~~vLD~CAaPGgKt~~l~~~~~~--~g~i~a~d~~~~R~~~l~~~l~r~g~~~i~~~~~d~~~~~~~~~~fD~ILlDa  195 (315)
T 1ixk_A          118 PGEIVADMAAAPGGKTSYLAQLMRN--DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA  195 (315)
T ss_dssp             TTCEEEECCSSCSHHHHHHHHHTTT--CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred             CCCEEEECCCCCHHHHHHHHHHCCC--CCEEEEECCCHHHHHHHHHHHHHCCCCCCCEECCCCHHCCCCCCCCCEEEEEC
T ss_conf             9992889577711446653331268--84478410788999999999987187652111243000012356543798617


No 177
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=94.26  E-value=0.083  Score=29.99  Aligned_cols=92  Identities=11%  Similarity=0.040  Sum_probs=53.1

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--------CCEEEECHHH------HH
Q ss_conf             234431111146773356565227554663478750000389999999997389--------8099804266------53
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--------RGKVFACRIQ------EA  135 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--------~~~vi~~r~e------~~  135 (168)
                      +.+.+|+|+|+|.|---.-+  ...  ....++.+|.+..-+.-.++-...++.        +...+++.+.      .+
T Consensus        33 ~~~~~VLDlGCG~G~dl~k~--~~~--~~~~v~GiDis~~~i~~A~~r~~~~~~~~~~~~~~~~~f~~~D~~~~~~~~~~  108 (313)
T 3bgv_A           33 KRDITVLDLGCGKGGDLLKW--KKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKF  108 (313)
T ss_dssp             --CCEEEEETCTTTTTHHHH--HHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTC
T ss_pred             CCCCEEEEEECCCCHHHHHH--HHC--CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHCHHHHHC
T ss_conf             89797999734776889999--965--99979999599999999999988543222223577638996563212013314


Q ss_pred             HHCCCCCCEEEECCCC-----C---HHHHHHHHHHHHC
Q ss_conf             3124798699991479-----9---8999998488520
Q gi|254780807|r  136 PQMITTCDVISARALA-----D---LDTLLEYSFPWLY  165 (168)
Q Consensus       136 ~~~~~~~d~v~sRA~a-----~---l~~ll~~~~pllk  165 (168)
                      +....+||+|++-...     +   +..++.-....||
T Consensus       109 ~~~~~~FD~I~~~f~lhy~~~~~~~~~~~l~ni~~~Lk  146 (313)
T 3bgv_A          109 RDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLS  146 (313)
T ss_dssp             SSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEE
T ss_pred             CCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHCC
T ss_conf             67677610899656424212158799998999875307


No 178
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.17  E-value=0.14  Score=28.71  Aligned_cols=74  Identities=20%  Similarity=0.133  Sum_probs=56.1

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCE-EEECHHHHHHHCCCCCCEEEE--
Q ss_conf             34431111146773356565227554663478750000389999999997389809-980426653312479869999--
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISA--  147 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~-vi~~r~e~~~~~~~~~d~v~s--  147 (168)
                      .+.+++|+-+|.|.=++|||=.     ...|+.+|++..-+...++-+...++++. ....+.+..   ...+|.|+-  
T Consensus       290 ~~~~vlDLycG~G~fsl~LA~~-----~~~V~gvE~~~~av~~A~~na~~n~~~~~~~~~~~~~~~---~~~~D~vvlDP  361 (425)
T 2jjq_A          290 EGEKILDMYSGVGTFGIYLAKR-----GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVS---VKGFDTVIVDP  361 (425)
T ss_dssp             CSSEEEEETCTTTHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCC---CTTCSEEEECC
T ss_pred             CCCEEEECCCCCCHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEHHHHHHH---HCCCCEEEECC
T ss_conf             8777876267866888998742-----855457504688899999989877970798640113443---06999999999


Q ss_pred             -CCCCC
Q ss_conf             -14799
Q gi|254780807|r  148 -RALAD  152 (168)
Q Consensus       148 -RA~a~  152 (168)
                       ||=+.
T Consensus       362 PR~G~~  367 (425)
T 2jjq_A          362 PRAGLH  367 (425)
T ss_dssp             CTTCSC
T ss_pred             CCCCCC
T ss_conf             873628


No 179
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=94.17  E-value=0.28  Score=26.93  Aligned_cols=98  Identities=15%  Similarity=0.143  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHH--------H--
Q ss_conf             999898646356431001234431111146773356565227554663478750000389999999997--------3--
Q gi|254780807|r   52 EDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------T--  121 (168)
Q Consensus        52 ~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~--------L--  121 (168)
                      +..|.+-+.+...  ...+++++++-+|.|+|..  +-.+.....  .+++.||-.++-+...++.-..        .  
T Consensus        58 e~~Y~e~l~h~~l--~~~~~p~~VLiiG~G~G~~--~~~~l~~~~--~~v~~VEiD~~vi~~a~~~~~~~~~~~e~~~~~  131 (281)
T 1mjf_A           58 ERSYHEPLVHPAM--LAHPKPKRVLVIGGGDGGT--VREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNG  131 (281)
T ss_dssp             THHHHHHHHHHHH--HHSSCCCEEEEEECTTSHH--HHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTT
T ss_pred             HHHHHHHHHHHHH--HCCCCCCEEEEEECCCHHH--HHHHHHCCC--CEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCC
T ss_conf             7777898886887--5099988799992894399--999984388--358997068899999998511142134453035


Q ss_pred             C-CCCEEEECHHHHHHHCCCCCCEEEECCCCCHHH
Q ss_conf             8-980998042665331247986999914799899
Q gi|254780807|r  122 A-ARGKVFACRIQEAPQMITTCDVISARALADLDT  155 (168)
Q Consensus       122 ~-L~~~vi~~r~e~~~~~~~~~d~v~sRA~a~l~~  155 (168)
                      . -+.+++.+.+.+.-...++||+|+.=++.|...
T Consensus       132 ~d~rv~v~~~Da~~~l~~~~~yDvIi~D~~~p~~~  166 (281)
T 1mjf_A          132 KHEKAKLTIGDGFEFIKNNRGFDVIIADSTDPVGP  166 (281)
T ss_dssp             CCSSEEEEESCHHHHHHHCCCEEEEEEECCCCC--
T ss_pred             CCCCEEEEECHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf             79966999621899973078878899918998886


No 180
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=93.87  E-value=0.19  Score=27.89  Aligned_cols=71  Identities=15%  Similarity=0.149  Sum_probs=46.7

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             2344311111467733565652275546634787500003899999999973898-09980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      ..+..|++||.|-|.  +--+++..   +..|++||..++=+.+|++....-+.. ..++++.+-+..  ..++..|++
T Consensus        41 ~~~d~VLEIGPG~G~--LT~~Ll~~---~~~v~aiE~D~~l~~~L~e~~~~~~~~~~~~i~~D~~~~~--~~~~~~vVg  112 (299)
T 2h1r_A           41 KSSDIVLEIGCGTGN--LTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV--FPKFDVCTA  112 (299)
T ss_dssp             CTTCEEEEECCTTST--THHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC--CCCCSEEEE
T ss_pred             CCCCEEEEECCCHHH--HHHHHHHC---CCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH--CCCCCEEEC
T ss_conf             998989996897279--99999823---9907999777089999997543213333332034420000--245434614


No 181
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=93.83  E-value=0.15  Score=28.53  Aligned_cols=76  Identities=13%  Similarity=-0.024  Sum_probs=54.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEE--CHHHHHHHCCCCCCEEEEC
Q ss_conf             34431111146773356565227554663478750000389999999997389809980--4266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA--CRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~--~r~e~~~~~~~~~d~v~sR  148 (168)
                      .+.+|+|+.+|+|==..-||-...+   ..++.+|.+.+|..-+++...++++++.+..  .+........++||.|..=
T Consensus       246 ~~~~VLD~CAaPGgKt~~la~~~~~---~~i~a~d~~~~r~~~l~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fD~VLlD  322 (429)
T 1sqg_A          246 NGEHILDLCAAPGGKTTHILEVAPE---AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD  322 (429)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHHCTT---CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHCCC---CCCEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCCCCEEEEE
T ss_conf             1441456068804899999986222---4656223426778888777864164311102344331010354566459970


Q ss_pred             C
Q ss_conf             4
Q gi|254780807|r  149 A  149 (168)
Q Consensus       149 A  149 (168)
                      |
T Consensus       323 a  323 (429)
T 1sqg_A          323 A  323 (429)
T ss_dssp             C
T ss_pred             C
T ss_conf             7


No 182
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransferase domain; 2.90A {Escherichia coli}
Probab=93.32  E-value=0.4  Score=26.08  Aligned_cols=77  Identities=13%  Similarity=0.089  Sum_probs=56.6

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHH-HCCCCCCEEEEC
Q ss_conf             3443111114677335656522755466347875000038999999999738980-99804266533-124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-QMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~-~~~~~~d~v~sR  148 (168)
                      .+..|+|+-+|.|==..-||=...+  .+.++..|.+.+|+.-|++-..++|+.+ .+.+.....+. .....||.|..=
T Consensus       117 ~g~~VLDlCAAPGgKT~~la~~~~~--~g~lvAnD~~~~R~~~L~~nl~r~g~~nv~~~~~d~~~~~~~~~~~fD~ILvD  194 (479)
T 2frx_A          117 APQRVMDVAAAPGSKTTQISARMNN--EGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLD  194 (479)
T ss_dssp             CCSEEEESSCTTSHHHHHHHHHTTT--CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCCCCCCCEEEEC
T ss_conf             9986999478865899999986246--82599653657778899998986389718999354001140131016789965


Q ss_pred             C
Q ss_conf             4
Q gi|254780807|r  149 A  149 (168)
Q Consensus       149 A  149 (168)
                      |
T Consensus       195 a  195 (479)
T 2frx_A          195 A  195 (479)
T ss_dssp             C
T ss_pred             C
T ss_conf             9


No 183
>3ndi_A Methyltransferase; S-adenosylmethionine, kijanose, tetronitrose, tetradeoxysuga micromonospora chalcea, TCAB9, SUGA methylation; HET: SAM TMP; 1.50A {Micromonospora chalcea} PDB: 3ndj_A*
Probab=93.22  E-value=0.13  Score=28.83  Aligned_cols=104  Identities=15%  Similarity=0.133  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHH-HHH--CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCE--EE
Q ss_conf             98986463564-310--01234431111146773356565227554663478750000389999999997389809--98
Q gi|254780807|r   54 FWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VF  128 (168)
Q Consensus        54 ~~~rHi~DSl~-~~~--~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~--vi  128 (168)
                      .|.+|+-+=.. +..  ....+..|+|||+|.|.   -|..+.. . +..+.-+|+...-+..    ...-++...  ..
T Consensus        87 ~~~~~~~~~~~~l~~~~~~~~~~~ileIG~~dG~---lL~~~~~-~-~~~~~Gidps~~~~~~----~~~~~~~~~~~~~  157 (416)
T 3ndi_A           87 VMREHFAMLARDFLATELTGPDPFIVEIGCNDGI---MLRTIQE-A-GVRHLGFEPSSGVAAK----AREKGIRVRTDFF  157 (416)
T ss_dssp             HHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTT---THHHHHH-T-TCEEEEECSCHHHHHH----HHHTTCCEECSCC
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCH---HHHHHHH-C-CCCEEEECCCCCHHHH----HCCCCCCEEEECC
T ss_conf             9999999999999987434778779983588870---5443342-0-3532442256203444----3035563684042


Q ss_pred             E-CHHHHHHHCCCCCCEEEECCC----CCHHHHHHHHHHHHCC
Q ss_conf             0-426653312479869999147----9989999984885206
Q gi|254780807|r  129 A-CRIQEAPQMITTCDVISARAL----ADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       129 ~-~r~e~~~~~~~~~d~v~sRA~----a~l~~ll~~~~pllk~  166 (168)
                      . ..+++......+||+|++|.|    ..+..+++-...+|++
T Consensus       158 ~~~~~~~~~~~~~k~D~I~~~~vleHi~dp~~fl~~i~~~L~~  200 (416)
T 3ndi_A          158 EKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAP  200 (416)
T ss_dssp             SHHHHHHHHHHHCCEEEEEEESCGGGCSCHHHHHHHHHHHEEE
T ss_pred             HHHHHHHHHHCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHCC
T ss_conf             0566788885158751887750053150289999999987466


No 184
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=93.05  E-value=0.4  Score=26.03  Aligned_cols=77  Identities=10%  Similarity=0.097  Sum_probs=56.4

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHH----HCCCCCCEE
Q ss_conf             3443111114677335656522755466347875000038999999999738980-99804266533----124798699
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP----QMITTCDVI  145 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~----~~~~~~d~v  145 (168)
                      .+..|+|..+|.|==.+-++-...+.  ..++.+|.+.+|..-+++..+++|+.+ .+++..+....    .....||.|
T Consensus        83 ~g~~vLD~CaapGgKt~~i~~~~~~~--~~i~a~d~~~~rl~~l~~~~~r~g~~~~~~~~~d~~~~~~~~~~~~~~fD~I  160 (274)
T 3ajd_A           83 EDDFILDMCAAPGGKTTHLAQLMKNK--GTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI  160 (274)
T ss_dssp             TTCEEEETTCTTCHHHHHHHHHTTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCC--CCEEEECCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCCCEE
T ss_conf             99979990788868899999985386--8338732778899999887876511441002243767666531454457679


Q ss_pred             EECC
Q ss_conf             9914
Q gi|254780807|r  146 SARA  149 (168)
Q Consensus       146 ~sRA  149 (168)
                      ..=|
T Consensus       161 LlDa  164 (274)
T 3ajd_A          161 LLDA  164 (274)
T ss_dssp             EEEE
T ss_pred             EECC
T ss_conf             9638


No 185
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17
Probab=93.04  E-value=0.29  Score=26.85  Aligned_cols=81  Identities=11%  Similarity=0.157  Sum_probs=53.1

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHH-----CC-CCEEEECHHHH-HHHCC
Q ss_conf             0123443111114677335656522-75546634787500003899999999973-----89-80998042665-33124
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKT-----AA-RGKVFACRIQE-APQMI  139 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L-----~L-~~~vi~~r~e~-~~~~~  139 (168)
                      ..+++++++.||.|+|.  ++-.+. .+..  .++++||-.+.-+...+.--...     += +.+++.+.+.+ +.+..
T Consensus        74 ~~~~pk~vLiiG~G~G~--~~~~ll~~~~~--~~i~~VEiDp~Vi~~a~~~f~~~~~~~~~dprv~v~~~Da~~~l~~~~  149 (314)
T 1uir_A           74 THPEPKRVLIVGGGEGA--TLREVLKHPTV--EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTE  149 (314)
T ss_dssp             HSSCCCEEEEEECTTSH--HHHHHTTSTTC--CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCC
T ss_pred             HCCCCCEEEEECCCCHH--HHHHHHHCCCC--CEEEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHCC
T ss_conf             09997879998898379--99999865996--779874021899999875183013453568706999725999997487


Q ss_pred             CCCCEEEECCCCC
Q ss_conf             7986999914799
Q gi|254780807|r  140 TTCDVISARALAD  152 (168)
Q Consensus       140 ~~~d~v~sRA~a~  152 (168)
                      .+||+|++=+.-|
T Consensus       150 ~~yDvIi~D~~dp  162 (314)
T 1uir_A          150 ERYDVVIIDLTDP  162 (314)
T ss_dssp             CCEEEEEEECCCC
T ss_pred             CCCCEEEECCCCC
T ss_conf             7678899878875


No 186
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=92.68  E-value=0.42  Score=25.95  Aligned_cols=77  Identities=21%  Similarity=0.129  Sum_probs=57.8

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCE-EEECHHHHH-HHCCCCCCEEEEC
Q ss_conf             34431111146773356565227554663478750000389999999997389809-980426653-3124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA-PQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~-vi~~r~e~~-~~~~~~~d~v~sR  148 (168)
                      .+..|+|+-+|.|==..-||-...+.  +.++..|.+.+|+.-|++-+++++..|. +.+....++ +.....||.|..-
T Consensus       105 pg~~VLDlCAAPGgKt~~la~~l~~~--g~l~a~d~~~~R~~~l~~nl~r~g~~n~~v~~~d~~~~~~~~~~~fD~VLvD  182 (456)
T 3m4x_A          105 PGEKVLDLCAAPGGKSTQLAAQMKGK--GLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD  182 (456)
T ss_dssp             TTCEEEESSCTTCHHHHHHHHHHTTC--SEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEC
T ss_conf             99989881678647999999970089--7588630646777899876875278748999325443552124655579974


Q ss_pred             C
Q ss_conf             4
Q gi|254780807|r  149 A  149 (168)
Q Consensus       149 A  149 (168)
                      |
T Consensus       183 a  183 (456)
T 3m4x_A          183 A  183 (456)
T ss_dssp             C
T ss_pred             C
T ss_conf             8


No 187
>2yui_A Anamorsin; cytokine-induced apoptosis inhibitor 1, ciapin1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.44  E-value=0.079  Score=30.14  Aligned_cols=85  Identities=14%  Similarity=0.110  Sum_probs=47.0

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC--EEEEC-HHHHHHHCCCCCCEEEE
Q ss_conf             3443111114677335656522755466347875000038999999999738980--99804-26653312479869999
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFAC-RIQEAPQMITTCDVISA  147 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~--~vi~~-r~e~~~~~~~~~d~v~s  147 (168)
                      .+.+++|+|.|.|-=  ++.+. ..     ..-+|....-   ++.+..+.+-+.  .+.+. +.+..+-....||+|+|
T Consensus         4 ~~~~~~DlGcG~G~~--v~~l~-~~-----~~~vd~~~~~---v~~~~~~~~~~g~v~v~~~~~l~~~~~~~~sfD~v~s   72 (182)
T 2yui_A            4 GSSGMADFGISAGQF--VAVVW-DK-----SSPVEALKGL---VDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILS   72 (182)
T ss_dssp             SCCCCSSCCCCTTSE--EEEEE-CT-----TSCSHHHHHH---HHHHHHHHTTTSEEEEEETTHHHHSCCCTTCBSEEEE
T ss_pred             CCCEEEEECCCCCHH--HHHHH-HC-----CCCCCHHHHH---HHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCEEEE
T ss_conf             887768966899887--89898-52-----8993158999---9999997456880799870000347875457638998


Q ss_pred             CCCCC-----HHHHHHHHHHHHCC
Q ss_conf             14799-----89999984885206
Q gi|254780807|r  148 RALAD-----LDTLLEYSFPWLYQ  166 (168)
Q Consensus       148 RA~a~-----l~~ll~~~~pllk~  166 (168)
                      ..+-+     ...++.-..+.||+
T Consensus        73 ~~~~~~~~~~~~~~l~e~~rvLKP   96 (182)
T 2yui_A           73 GLVPGSTTLHSAEILAEIARILRP   96 (182)
T ss_dssp             SCSSSCCCCCCHHHHHHHHHHBCT
T ss_pred             CCEECCCCCCHHHHHHHHHHHHCC
T ss_conf             232336762289999999997068


No 188
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii OT3}
Probab=92.41  E-value=0.41  Score=26.01  Aligned_cols=77  Identities=14%  Similarity=0.120  Sum_probs=56.1

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHH--CCCCCCEEEE
Q ss_conf             3443111114677335656522755466347875000038999999999738980-998042665331--2479869999
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ--MITTCDVISA  147 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~--~~~~~d~v~s  147 (168)
                      .+..|+|+.+|.|==..-|+-...+.  ..++.+|.+.+|..-|++-..++|+++ .+........+.  ...+||.|..
T Consensus       259 ~g~~VLD~CAaPGGKT~~la~~~~~~--~~i~a~d~~~~rl~~l~~~l~r~g~~~v~~~~~d~~~~~~~~~~~~fD~ILv  336 (450)
T 2yxl_A          259 PGETVVDLAAAPGGKTTHLAELMKNK--GKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL  336 (450)
T ss_dssp             TTCEEEESSCTTCHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHC--CCEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCEEEE
T ss_conf             89858750688657999999986513--8503112548778778999997087631676133010643235565766985


Q ss_pred             CC
Q ss_conf             14
Q gi|254780807|r  148 RA  149 (168)
Q Consensus       148 RA  149 (168)
                      -|
T Consensus       337 Da  338 (450)
T 2yxl_A          337 DA  338 (450)
T ss_dssp             EC
T ss_pred             CC
T ss_conf             18


No 189
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=92.33  E-value=0.41  Score=25.97  Aligned_cols=75  Identities=17%  Similarity=0.148  Sum_probs=52.6

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC---------CCCEEEECHHHHH-H---H
Q ss_conf             3443111114677335656522755466347875000038999999999738---------9809980426653-3---1
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA---------ARGKVFACRIQEA-P---Q  137 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~---------L~~~vi~~r~e~~-~---~  137 (168)
                      .+.+|+|..+|-|-=|+++|-.     +..|+++|++.--...+++..+...         -+.+++++.+.+. +   +
T Consensus        83 ~~~~VLD~taGlG~Da~~lA~~-----G~~V~~vE~sp~~~~Ll~~~l~~a~~~~~~~~~~~ri~~~~gDa~~~l~~l~~  157 (258)
T 2r6z_A           83 AHPTVWDATAGLGRDSFVLASL-----GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVK  157 (258)
T ss_dssp             GCCCEEETTCTTCHHHHHHHHT-----TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf             8981999078735999999976-----99899996888999999999999996968767887557100759999999996


Q ss_pred             CCCCCCEEEECCC
Q ss_conf             2479869999147
Q gi|254780807|r  138 MITTCDVISARAL  150 (168)
Q Consensus       138 ~~~~~d~v~sRA~  150 (168)
                      ...+||+|..=-+
T Consensus       158 ~~~~~DvIylDPM  170 (258)
T 2r6z_A          158 TQGKPDIVYLDPM  170 (258)
T ss_dssp             HHCCCSEEEECCC
T ss_pred             CCCCCCEEEECCC
T ss_conf             3899888998899


No 190
>1fp2_A Isoflavone O-methytransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=92.23  E-value=0.18  Score=28.05  Aligned_cols=67  Identities=13%  Similarity=0.179  Sum_probs=47.2

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898--099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+++|||.|.|.=++-++-.+|+++   +++.|        +.+++......  ..++..+..+.   ...+|++..|
T Consensus       188 ~~~~vlDvGGG~G~~~~~l~~~~P~l~---~~v~D--------lp~v~~~~~~~~~~~~~~~~~~~~---~p~ad~~~l~  253 (352)
T 1fp2_A          188 GLESIVDVGGGTGTTAKIICETFPKLK---CIVFD--------RPQVVENLSGSNNLTYVGGDMFTS---IPNADAVLLK  253 (352)
T ss_dssp             TCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEE--------CHHHHTTCCCBTTEEEEECCTTTC---CCCCSEEEEE
T ss_pred             CCEEEEEECCCCCHHHHHHHHHCCCCE---EEEEE--------CCHHHHHHCCCCCEEEECCCCCCC---CCCCCEEEEE
T ss_conf             871898605886188999997589975---99941--------704414431467469853643357---9854178898


Q ss_pred             CCC
Q ss_conf             479
Q gi|254780807|r  149 ALA  151 (168)
Q Consensus       149 A~a  151 (168)
                      .+-
T Consensus       254 ~vl  256 (352)
T 1fp2_A          254 YIL  256 (352)
T ss_dssp             SCG
T ss_pred             EEE
T ss_conf             520


No 191
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=92.07  E-value=0.25  Score=27.27  Aligned_cols=59  Identities=15%  Similarity=0.055  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHH-HHHC-CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHH
Q ss_conf             98986463564-3100-123443111114677335656522755466347875000038999999
Q gi|254780807|r   54 FWIRHVEDSLR-VFQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY  116 (168)
Q Consensus        54 ~~~rHi~DSl~-~~~~-~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~  116 (168)
                      -|.++.+.++. .+.- -..+.+++|||+|.|+-.+..|  .+.-  ..|+++|-++.-+..++.
T Consensus        52 ~~~~~~l~~l~~~~~~g~~~G~~lLDvG~Gpgi~~~l~a--~~~~--~~I~~~D~s~~~~~~~~k  112 (289)
T 2g72_A           52 GVGPWKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSA--CSHF--EDITMTDFLEVNRQELGR  112 (289)
T ss_dssp             SHHHHHHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTG--GGGC--SEEEEECSCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHH--CCCC--CEEEEECCCHHHHHHHHH
T ss_conf             257779999999857888789889995747136788875--6467--814885498999999998


No 192
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=91.84  E-value=0.57  Score=25.15  Aligned_cols=60  Identities=17%  Similarity=0.078  Sum_probs=41.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHHHHH
Q ss_conf             234431111146773356565227554663478750000389999999997389-8099804266533
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP  136 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e~~~  136 (168)
                      ..+..+++||.|.|-=-..|+-.     ...|++||..++-+..|++-  ..+. +.+++++.+-++.
T Consensus        29 ~~~d~VlEIGpG~G~LT~~L~~~-----~~~v~avEiD~~l~~~L~~~--~~~~~n~~ii~~D~l~~~   89 (244)
T 1qam_A           29 NEHDNIFEIGSGKGHFTLELVQR-----CNFVTAIEIDHKLCKTTENK--LVDHDNFQVLNKDILQFK   89 (244)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHH-----SSEEEEECSCHHHHHHHHHH--TTTCCSEEEECCCGGGCC
T ss_pred             CCCCEEEEECCCCCHHHHHHHHC-----CCCEEEEEECHHHHHHHHHH--HCCCCCEEEEECHHHCCC
T ss_conf             99997999738871999999855-----58306998530177999974--144776577300122256


No 193
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=91.75  E-value=0.58  Score=25.13  Aligned_cols=75  Identities=16%  Similarity=0.033  Sum_probs=50.7

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC---------------------CCEE
Q ss_conf             1234431111146773356565227554663478750000389999999997389---------------------8099
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA---------------------RGKV  127 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L---------------------~~~v  127 (168)
                      .+.+.+|+|+|.|.|.=.+-||     -++..|+.+|-+..-+   +.+.++.+.                     ++.+
T Consensus        66 ~~~~~rvL~pgCG~G~da~~LA-----~~G~~V~gvD~S~~Ai---~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  137 (252)
T 2gb4_A           66 GQSGLRVFFPLCGKAIEMKWFA-----DRGHTVVGVEISEIGI---REFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISL  137 (252)
T ss_dssp             TCCSCEEEETTCTTCTHHHHHH-----HTTCEEEEECSCHHHH---HHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHH-----HCCCEEEEECCCHHHH---HHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEE
T ss_conf             8999989998987808899998-----4898489981629999---9999875455431222100364202214773689


Q ss_pred             EECHHHHHH-HCCCCCCEEEECCCC
Q ss_conf             804266533-124798699991479
Q gi|254780807|r  128 FACRIQEAP-QMITTCDVISARALA  151 (168)
Q Consensus       128 i~~r~e~~~-~~~~~~d~v~sRA~a  151 (168)
                      +++.....+ .....||.|..|++.
T Consensus       138 ~~~D~f~~~~~~~~~~d~i~d~~~~  162 (252)
T 2gb4_A          138 YCCSIFDLPRANIGKFDRIWDRGAL  162 (252)
T ss_dssp             EESCTTTGGGGCCCCEEEEEESSST
T ss_pred             EECCHHHCCCCCCCCCCCEEEEEEE
T ss_conf             9854332021123564300356777


No 194
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=91.17  E-value=0.6  Score=25.05  Aligned_cols=82  Identities=18%  Similarity=0.208  Sum_probs=54.4

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHC---C---CCEEEECHHHH-HHHCC
Q ss_conf             0123443111114677335656522-755466347875000038999999999738---9---80998042665-33124
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTA---A---RGKVFACRIQE-APQMI  139 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~---L---~~~vi~~r~e~-~~~~~  139 (168)
                      ..+++.+++-||.|+|-  ++-.++ .|..  .++++||-.+.-+...+......+   +   ++.++.+.+.+ +.+..
T Consensus        80 ~~~~p~~VLiiGgG~G~--~~~e~lk~~~v--~~v~~VEiD~~Vi~~a~~~~~~~~~~~~~dprv~i~~~Da~~~l~~~~  155 (294)
T 3adn_A           80 AHGHAKHVLIIGGGDGA--MLREVTRHKNV--ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTS  155 (294)
T ss_dssp             HSTTCCEEEEESCTTCH--HHHHHHTCTTC--CEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCC
T ss_pred             CCCCCCEEEEECCCCHH--HHHHHHHHCCC--CEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHCC
T ss_conf             09985669998898379--99999981996--638997178999999874484113554678857999516899985168


Q ss_pred             CCCCEEEECCCCCH
Q ss_conf             79869999147998
Q gi|254780807|r  140 TTCDVISARALADL  153 (168)
Q Consensus       140 ~~~d~v~sRA~a~l  153 (168)
                      ++||+|+.=++.|.
T Consensus       156 ~~yDvIi~D~~dp~  169 (294)
T 3adn_A          156 QTFDVIISDCTDPI  169 (294)
T ss_dssp             CCEEEEEECC----
T ss_pred             CCCCEEEEECCCCC
T ss_conf             87778998088778


No 195
>2pt6_A Spermidine synthase; transferase, structural genomics consortium, SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum 3D7} PDB: 2pss_A* 2pt9_A*
Probab=90.83  E-value=0.68  Score=24.72  Aligned_cols=82  Identities=18%  Similarity=0.234  Sum_probs=54.4

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCC-CCCCCCEEEEEHHHHHHHHHHHHHHHHHC-----CCCEEEECHHHH-HHHCCC
Q ss_conf             01234431111146773356565227-55466347875000038999999999738-----980998042665-331247
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQL-SSIEGGLVNLIESKNKKASFLRYVVQKTA-----ARGKVFACRIQE-APQMIT  140 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~-p~~~~~~v~Lves~~KK~~FL~~~~~~L~-----L~~~vi~~r~e~-~~~~~~  140 (168)
                      ..+++++++-+|.|+|-  ++-.+.. +..  .++++||-.+.-+..-++.-...+     -+++++.+.+.+ +.+...
T Consensus       113 ~~~~pk~VLIiGgGdG~--~~rellk~~~~--~~v~~VEID~~Vv~~ak~~f~~~~~~~~dprv~v~~~Da~~~l~~~~~  188 (321)
T 2pt6_A          113 VSKEPKNVLVVGGGDGG--IIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTN  188 (321)
T ss_dssp             HSSSCCEEEEEECTTCH--HHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCS
T ss_pred             CCCCCCEEEEECCCCHH--HHHHHHHCCCC--CCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHCCC
T ss_conf             19995769998489539--99999972996--414785257999999998626623443687626996169999873667


Q ss_pred             CCCEEEECCCCCH
Q ss_conf             9869999147998
Q gi|254780807|r  141 TCDVISARALADL  153 (168)
Q Consensus       141 ~~d~v~sRA~a~l  153 (168)
                      +||+|+.=++.|.
T Consensus       189 ~yDvIi~D~~dp~  201 (321)
T 2pt6_A          189 TYDVIIVDSSDPI  201 (321)
T ss_dssp             CEEEEEEECCCSS
T ss_pred             CCCEEEEECCCCC
T ss_conf             6677999379988


No 196
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=90.69  E-value=0.28  Score=26.92  Aligned_cols=67  Identities=15%  Similarity=0.141  Sum_probs=45.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             234431111146773356565227554663478750000389999999997389--809980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      +...+++|+|.|.|.=.+-++-.+|+++   +++.|        +-+++...+.  +++.+.+...+.   ....|+++.
T Consensus       208 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~---~~~~D--------lp~vi~~~~~~~rv~~~~gD~~~~---~~~~d~~~l  273 (372)
T 1fp1_D          208 EGISTLVDVGGGSGRNLELIISKYPLIK---GINFD--------LPQVIENAPPLSGIEHVGGDMFAS---VPQGDAMIL  273 (372)
T ss_dssp             TTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEE--------CHHHHTTCCCCTTEEEEECCTTTC---CCCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHCCCCE---EEEEE--------CHHHHHHCCCCCCCEEECCCCCCC---CCCCCEEEE
T ss_conf             4786799807984189999999789974---99971--------678776413567727966752136---776765999


Q ss_pred             CCC
Q ss_conf             147
Q gi|254780807|r  148 RAL  150 (168)
Q Consensus       148 RA~  150 (168)
                      +.+
T Consensus       274 ~~i  276 (372)
T 1fp1_D          274 KAV  276 (372)
T ss_dssp             ESS
T ss_pred             EEE
T ss_conf             974


No 197
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=90.27  E-value=0.53  Score=25.36  Aligned_cols=70  Identities=16%  Similarity=0.136  Sum_probs=53.3

Q ss_pred             CCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC----------CCEEEECHHHH-HHHCCCC
Q ss_conf             431111146773356565227554663478750000389999999997389----------80998042665-3312479
Q gi|254780807|r   73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA----------RGKVFACRIQE-APQMITT  141 (168)
Q Consensus        73 ~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L----------~~~vi~~r~e~-~~~~~~~  141 (168)
                      .+|+|.-.|-|-=++++|-.     +..|+++|++.--+..|++..+....          +.+++++...+ +.+....
T Consensus        90 ~~VlDaTaGlG~Da~vlA~~-----G~~V~~iEr~p~l~~ll~d~l~ra~~~~~~~~~~~~ri~l~~~Ds~~~L~~~~~~  164 (258)
T 2oyr_A           90 PDVVDATAGLGRDAFVLASV-----GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPR  164 (258)
T ss_dssp             CCEEETTCTTCHHHHHHHHH-----TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSC
T ss_pred             CEEEECCCCCHHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCHHHHHHHCCCC
T ss_conf             84898787742999999977-----9968998479999999999999987273778998632378738799998626766


Q ss_pred             CCEEEE
Q ss_conf             869999
Q gi|254780807|r  142 CDVISA  147 (168)
Q Consensus       142 ~d~v~s  147 (168)
                      ||+|.-
T Consensus       165 ~DvIYl  170 (258)
T 2oyr_A          165 PQVVYL  170 (258)
T ss_dssp             CSEEEE
T ss_pred             CCEEEE
T ss_conf             887998


No 198
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=90.21  E-value=0.79  Score=24.36  Aligned_cols=61  Identities=16%  Similarity=0.176  Sum_probs=43.3

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHH
Q ss_conf             234431111146773356565227554663478750000389999999997389--809980426653
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEA  135 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~  135 (168)
                      ..+..|+.||.|.|-  +--+++.   .+.+|++||...+-+..|++.......  +.+++++.+-+.
T Consensus        27 ~~~d~VlEIGPG~G~--LT~~Ll~---~~~~v~aiE~D~~l~~~L~~~~~~~~~~~~~~ii~~D~l~~   89 (285)
T 1zq9_A           27 RPTDVVLEVGPGTGN--MTVKLLE---KAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT   89 (285)
T ss_dssp             CTTCEEEEECCTTST--THHHHHH---HSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred             CCCCEEEEECCCCHH--HHHHHHH---CCCCEEEEEECHHHHHHHHHHHHCCCCCCCEEEECHHHHHC
T ss_conf             999979996897219--9999980---49966999987899999998762012100344540665411


No 199
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus HB8} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=89.92  E-value=0.73  Score=24.53  Aligned_cols=52  Identities=15%  Similarity=0.183  Sum_probs=34.0

Q ss_pred             CCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             44311111467733565652275546634787500003899999999973898099804
Q gi|254780807|r   72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC  130 (168)
Q Consensus        72 ~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~  130 (168)
                      +..|++||.|-|.  +--+++..   +..|++||...+-+..|++-..  +.++.+++.
T Consensus        47 ~~~VlEIGpG~G~--LT~~L~~~---~~~v~avE~D~~l~~~L~~~~~--~~~~~~i~~   98 (271)
T 3fut_A           47 TGPVFEVGPGLGA--LTRALLEA---GAEVTAIEKDLRLRPVLEETLS--GLPVRLVFQ   98 (271)
T ss_dssp             CSCEEEECCTTSH--HHHHHHHT---TCCEEEEESCGGGHHHHHHHTT--TSSEEEEES
T ss_pred             CCCEEEECCCCCH--HHHHHHHC---CCCEEEEEECHHHHHHHHHHHH--HCCHHHHHH
T ss_conf             9988996797719--99999960---8967999837067888875433--301033346


No 200
>2i7c_A Spermidine synthase; transferase, structural genomics consortium, SGC; HET: AAT 1PG; 1.71A {Plasmodium falciparum 3D7} PDB: 2hte_A* 3b7p_A* 2pwp_A*
Probab=89.71  E-value=1.1  Score=23.56  Aligned_cols=82  Identities=18%  Similarity=0.243  Sum_probs=54.3

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHC-----CCCEEEECHHHH-HHHCCC
Q ss_conf             0123443111114677335656522-755466347875000038999999999738-----980998042665-331247
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTA-----ARGKVFACRIQE-APQMIT  140 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~-----L~~~vi~~r~e~-~~~~~~  140 (168)
                      ..+++++++=||-|+|-  ++-.+. ++..  .++++||-.+.-+..-++--...+     -+.+++.+.+.+ +.+...
T Consensus        75 ~~~~pk~vLiiGgG~G~--~~~ellk~~~~--~~i~~VEiD~~Vi~~a~~~f~~~~~~~~d~rv~v~~~Da~~~l~~~~~  150 (283)
T 2i7c_A           75 VSKEPKNVLVVGGGDGG--IIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTN  150 (283)
T ss_dssp             TSSSCCEEEEEECTTSH--HHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCS
T ss_pred             CCCCCCEEEEECCCCHH--HHHHHHHCCCC--CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCCC
T ss_conf             29982449998388349--99999974996--379997478999999998746502422487652896068999974688


Q ss_pred             CCCEEEECCCCCH
Q ss_conf             9869999147998
Q gi|254780807|r  141 TCDVISARALADL  153 (168)
Q Consensus       141 ~~d~v~sRA~a~l  153 (168)
                      +||+|+.=++.|.
T Consensus       151 ~yDvIi~D~~dp~  163 (283)
T 2i7c_A          151 TYDVIIVDSSDPI  163 (283)
T ss_dssp             CEEEEEEECCCTT
T ss_pred             CCCEEEEECCCCC
T ss_conf             7777999479988


No 201
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=89.60  E-value=0.3  Score=26.78  Aligned_cols=75  Identities=8%  Similarity=-0.006  Sum_probs=41.8

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEE-----------EECHHH--HHHH
Q ss_conf             344311111467733565652275546634787500003899999999973898099-----------804266--5331
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-----------FACRIQ--EAPQ  137 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~v-----------i~~r~e--~~~~  137 (168)
                      .+.+|+|+|.|-|  |-...-....  ...|+.+|.+..-+.-.++-..++..+...           +.+...  .+.+
T Consensus        48 ~~~~VLDlgcG~G--gDl~K~~~~~--~~~vvGiDiS~~~I~~A~~R~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  123 (302)
T 2vdw_A           48 NKRKVLAIDFGNG--ADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE  123 (302)
T ss_dssp             SCCEEEETTCTTT--TTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred             CCCEEEEEEEEEC--HHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCHHHHHHHH
T ss_conf             8997999950004--5279999669--98899997989999999999997212433100013305999861132444553


Q ss_pred             --CCCCCCEEEECC
Q ss_conf             --247986999914
Q gi|254780807|r  138 --MITTCDVISARA  149 (168)
Q Consensus       138 --~~~~~d~v~sRA  149 (168)
                        ...+||+|++.-
T Consensus       124 ~~~~~~FDvVs~qf  137 (302)
T 2vdw_A          124 VFYFGKFNIIDWQF  137 (302)
T ss_dssp             TCCSSCEEEEEEES
T ss_pred             HCCCCCEEEEEECC
T ss_conf             04789756999814


No 202
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=89.14  E-value=1.2  Score=23.31  Aligned_cols=82  Identities=18%  Similarity=0.204  Sum_probs=54.8

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHHC--C---CCEEEECHHHH-HHHCCC
Q ss_conf             0123443111114677335656522-755466347875000038999999999738--9---80998042665-331247
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTA--A---RGKVFACRIQE-APQMIT  140 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L~--L---~~~vi~~r~e~-~~~~~~  140 (168)
                      ..+++++++=||.|+|.  ++-.+. +|..  .++++||-.+.-+..-++......  +   +++++.+.+-+ +.+...
T Consensus       105 ~~~~pk~VLIiGgGdG~--~~rellk~~~v--~~v~~VEID~~Vi~~a~~~~~~~~~~~~dprv~i~~~Da~~~l~~~~~  180 (314)
T 2b2c_A          105 AHPDPKRVLIIGGGDGG--ILREVLKHESV--EKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKN  180 (314)
T ss_dssp             HSSSCCEEEEESCTTSH--HHHHHTTCTTC--CEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTT
T ss_pred             CCCCCCEEEEECCCCHH--HHHHHHHCCCC--CEEEEEEECHHHHHHHHHHCHHHCCCCCCCCEEEEECHHHHHHHCCCC
T ss_conf             39997879998898469--99999974995--458999608899999976363322545666527997108999741788


Q ss_pred             CCCEEEECCCCCH
Q ss_conf             9869999147998
Q gi|254780807|r  141 TCDVISARALADL  153 (168)
Q Consensus       141 ~~d~v~sRA~a~l  153 (168)
                      +||+|+.=++.|.
T Consensus       181 ~yDvII~D~~dp~  193 (314)
T 2b2c_A          181 EFDVIITDSSDPV  193 (314)
T ss_dssp             CEEEEEECCC---
T ss_pred             CCCEEEEECCCCC
T ss_conf             8888999689987


No 203
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=88.09  E-value=1.4  Score=22.90  Aligned_cols=82  Identities=18%  Similarity=0.163  Sum_probs=53.3

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHH--CC---CCEEEECHHHH-HHHCCC
Q ss_conf             0123443111114677335656522-75546634787500003899999999973--89---80998042665-331247
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKT--AA---RGKVFACRIQE-APQMIT  140 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L--~L---~~~vi~~r~e~-~~~~~~  140 (168)
                      ..+.+++++=||-|+|...  -.+. +|..  .++++||-.+.-+...++.-...  .+   +++++...+-. +.....
T Consensus        72 ~~~~pk~VLiiGgG~G~~~--~~~l~~~~~--~~v~~VEiD~~Vi~~a~~~~~~~~~~~~dprv~i~~~Da~~~l~~~~~  147 (275)
T 1iy9_A           72 THPNPEHVLVVGGGDGGVI--REILKHPSV--KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSEN  147 (275)
T ss_dssp             HSSSCCEEEEESCTTCHHH--HHHTTCTTC--SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCS
T ss_pred             CCCCCCEEEEEECCCHHHH--HHHHHCCCC--CEEEEEEECHHHHHHHHHHCHHHCCCCCCCCCEEEECHHHHHHHCCCC
T ss_conf             0999675999907963999--999965996--469999708899999998572313532387743898858998750567


Q ss_pred             CCCEEEECCCCCH
Q ss_conf             9869999147998
Q gi|254780807|r  141 TCDVISARALADL  153 (168)
Q Consensus       141 ~~d~v~sRA~a~l  153 (168)
                      +||+|+.=++.|.
T Consensus       148 ~yDvIi~D~~~p~  160 (275)
T 1iy9_A          148 QYDVIMVDSTEPV  160 (275)
T ss_dssp             CEEEEEESCSSCC
T ss_pred             CCCEEEEECCCCC
T ss_conf             7678999389988


No 204
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A*
Probab=88.07  E-value=1.3  Score=23.04  Aligned_cols=98  Identities=15%  Similarity=0.109  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHH----HC-CC
Q ss_conf             999989864635643100123443111114677335656522-7554663478750000389999999997----38-98
Q gi|254780807|r   51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQK----TA-AR  124 (168)
Q Consensus        51 ~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~----L~-L~  124 (168)
                      .+.+|..-+.+-..  ...+.+++++=||.|+|.  ++-.+. +|..  ..+++||-.+.-+..-++.-..    +. -+
T Consensus        77 de~~YhE~l~h~pl--~~~~~pk~VLIiGgG~G~--~~~ellk~~~~--~~v~~VEiD~~Vi~~a~~~~~~~~~~~~dpR  150 (304)
T 2o07_A           77 DEFSYQEMIANLPL--CSHPNPRKVLIIGGGDGG--VLREVVKHPSV--ESVVQCEIDEDVIQVSKKFLPGMAIGYSSSK  150 (304)
T ss_dssp             THHHHHHHHHHHHH--TTSSSCCEEEEEECTTSH--HHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTT
T ss_pred             CHHHHHHHHHHHHH--HCCCCCCEEEEECCCCHH--HHHHHHHCCCC--CEEEEECCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             48888898887998--619997869998799459--99999865985--3268760469999999985555334435772


Q ss_pred             CEEEECHHHH-HHHCCCCCCEEEECCCCCHH
Q ss_conf             0998042665-33124798699991479989
Q gi|254780807|r  125 GKVFACRIQE-APQMITTCDVISARALADLD  154 (168)
Q Consensus       125 ~~vi~~r~e~-~~~~~~~~d~v~sRA~a~l~  154 (168)
                      ++++.+.+-+ +.+...+||+|+.=++.|..
T Consensus       151 v~i~~~Da~~~l~~~~~~yDvIi~D~~dp~~  181 (304)
T 2o07_A          151 LTLHVGDGFEFMKQNQDAFDVIITDSSDPMG  181 (304)
T ss_dssp             EEEEESCHHHHHHTCSSCEEEEEEECC----
T ss_pred             EEEEEHHHHHHHHHCCCCCCEEEECCCCCCC
T ss_conf             4899607999997477778889990899886


No 205
>1kyz_A COMT, caffeic acid 3-O-methyltransferase; lignin, ferulic acid, methylation; HET: SAH FER; 2.20A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1kyw_A*
Probab=86.98  E-value=0.38  Score=26.17  Aligned_cols=68  Identities=12%  Similarity=0.090  Sum_probs=44.2

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             234431111146773356565227554663478750000389999999997389--809980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      ....+++|+|.|.|.=++-++-.+|+++   ++..|--.        ++.....  +...+..+..+   ....+|+++.
T Consensus       199 ~~~~~vlDvGgG~G~~~~~l~~~~P~l~---~~~~Dlp~--------v~~~~~~~~r~~~~~~d~~~---~~p~~D~~~~  264 (365)
T 1kyz_A          199 EGLKSLVDVGGGTGAVINTIVSKYPTIK---GINFDLPH--------VIEDAPSYPGVEHVGGDMFV---SIPKADAVFM  264 (365)
T ss_dssp             SSCSEEEEETCTTSHHHHHHHHHCTTSE---EEEEECTT--------TTTTCCCCTTEEEEECCTTT---CCCCCSCEEC
T ss_pred             CCCEEEEEECCCCHHHHHHHHHHCCCCE---EEECCCHH--------HHHHCCCCCCEEEECCCCCC---CCCCCCEEEE
T ss_conf             4871799825897389888998799806---99744817--------65430347766896155456---7887645888


Q ss_pred             CCCC
Q ss_conf             1479
Q gi|254780807|r  148 RALA  151 (168)
Q Consensus       148 RA~a  151 (168)
                      +.+-
T Consensus       265 ~~~l  268 (365)
T 1kyz_A          265 KWIC  268 (365)
T ss_dssp             SSSS
T ss_pred             EEEE
T ss_conf             8542


No 206
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=85.63  E-value=1.9  Score=22.10  Aligned_cols=93  Identities=16%  Similarity=0.069  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHH-----HC-CC--
Q ss_conf             99898646356431001234431111146773356565227554663478750000389999999997-----38-98--
Q gi|254780807|r   53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-----TA-AR--  124 (168)
Q Consensus        53 ~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~-----L~-L~--  124 (168)
                      .+|.+.+.....   ....+++++=||-|+|  |++-.++....  .++++||-.+.-+.+-++-...     ++ .+  
T Consensus       173 ~~Y~e~l~~~~l---~~~~pk~VLIIGGGdG--~~~revlk~~~--~~V~~VEID~~Vve~akk~~~~~~~~~~d~~r~~  245 (364)
T 2qfm_A          173 LAYTRAIMGSGK---EDYTGKDVLILGGGDG--GILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGD  245 (364)
T ss_dssp             HHHHHHHTTTTC---CCCTTCEEEEEECTTC--HHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEET
T ss_pred             HHHHHHHHHHHH---HCCCCCEEEEEECCCH--HHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             889999862575---4589885999969943--99999986178--4289971038999999986565400121084423


Q ss_pred             -CEEEECHHHH-HH---HCCCCCCEEEECCCCC
Q ss_conf             -0998042665-33---1247986999914799
Q gi|254780807|r  125 -GKVFACRIQE-AP---QMITTCDVISARALAD  152 (168)
Q Consensus       125 -~~vi~~r~e~-~~---~~~~~~d~v~sRA~a~  152 (168)
                       .+++...+-+ +.   +...+||+|+.=++.+
T Consensus       246 rv~iii~Da~~~l~~~~~~~~~yDvIi~Dl~d~  278 (364)
T 2qfm_A          246 CYQVLIEDCIPVLKRYAKEGREFDYVINDLTAV  278 (364)
T ss_dssp             TEEEEESCHHHHHHHHHHHTCCEEEEEEECCSS
T ss_pred             CCCEEHHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf             443355779999997453247502999807887


No 207
>1vjt_A Alpha-glucosidase; TM0752, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics, hydrolase; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=85.57  E-value=1.9  Score=22.08  Aligned_cols=71  Identities=11%  Similarity=0.130  Sum_probs=44.5

Q ss_pred             CCEEECCCC-CHHHHHHHHC--CCCCC--CCEEEEEHHHHHHHHH----HHHHHHHHCCCCEEE--ECHHHHHHHCCCCC
Q ss_conf             311111467-7335656522--75546--6347875000038999----999999738980998--04266533124798
Q gi|254780807|r   74 IWIDLGSGG-GFPGIITSIQ--LSSIE--GGLVNLIESKNKKASF----LRYVVQKTAARGKVF--ACRIQEAPQMITTC  142 (168)
Q Consensus        74 ~ilDiGSGa-GfPGi~laI~--~p~~~--~~~v~Lves~~KK~~F----L~~~~~~L~L~~~vi--~~r~e~~~~~~~~~  142 (168)
                      ++.=||.|+ +||+.....+  .+++.  ...++|+|-...|...    .+.++++.+.+.++.  ..|.|-+.    ..
T Consensus        14 KI~iIGaGS~~~~~~l~~~i~~~~~L~~~~~~l~L~Did~~rL~~~~~l~~~~~~~~~~~~~v~~Ttdr~eAl~----gA   89 (483)
T 1vjt_A           14 KISIIGAGSVRFALQLVGDIAQTEELSREDTHIYMMDVHERRLNASYILARKYVEELNSPVKIVKTSSLDEAID----GA   89 (483)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSTTTCSTTEEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHT----TC
T ss_pred             EEEEECCCHHHHHHHHHHHHHHCHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHC----CC
T ss_conf             89999986576599999999727212888777999689989999999999999996198908999789999976----99


Q ss_pred             CEEEEC
Q ss_conf             699991
Q gi|254780807|r  143 DVISAR  148 (168)
Q Consensus       143 d~v~sR  148 (168)
                      |+|++-
T Consensus        90 DfVi~~   95 (483)
T 1vjt_A           90 DFIINT   95 (483)
T ss_dssp             SEEEEC
T ss_pred             CEEEEE
T ss_conf             999980


No 208
>1qyr_A KSGA, high level kasugamycin resistance protein, S-; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24
Probab=85.16  E-value=0.82  Score=24.25  Aligned_cols=65  Identities=9%  Similarity=0.118  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHH
Q ss_conf             646356431001234431111146773356565227554663478750000389999999997389--80998042665
Q gi|254780807|r   58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQE  134 (168)
Q Consensus        58 Hi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~  134 (168)
                      .|++++.    ...+..++.||.|-|-  +--+++..   ...|++||...+-+..|+.   +...  +.+++++.+-+
T Consensus        12 ~iv~~~~----~~~~d~vlEIGpG~G~--LT~~Ll~~---~~~v~avE~D~~l~~~L~~---~~~~~~~~~ii~~D~l~   78 (252)
T 1qyr_A           12 SIVSAIN----PQKGQAMVEIGPGLAA--LTEPVGER---LDQLTVIELDRDLAARLQT---HPFLGPKLTIYQQDAMT   78 (252)
T ss_dssp             HHHHHHC----CCTTCCEEEECCTTTT--THHHHHTT---CSCEEEECCCHHHHHHHHT---CTTTGGGEEEECSCGGG
T ss_pred             HHHHHCC----CCCCCEEEEECCCCCH--HHHHHHHC---CCCEEEEEECCHHHHHHHH---HHHCCCCEEEEECHHHH
T ss_conf             9998448----9997969998998729--99999816---8976999962128899998---76317762565011455


No 209
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=84.82  E-value=0.45  Score=25.73  Aligned_cols=87  Identities=15%  Similarity=0.117  Sum_probs=48.8

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHHHHCCCCCCEEEE
Q ss_conf             234431111146773356565227554663478750000389999999997389--809980426653312479869999
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~~~~~~~~d~v~s  147 (168)
                      +...+++|||.|.|.-.+.++=.+|+++   ++++|...- +  .+.....-++  +..++.+...+   ....+|+++.
T Consensus       183 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~---~~~~D~~~~-~--~~~~~~~~~~~~ri~~~~~d~~~---~~p~~D~v~~  253 (348)
T 3lst_A          183 PATGTVADVGGGRGGFLLTVLREHPGLQ---GVLLDRAEV-V--ARHRLDAPDVAGRWKVVEGDFLR---EVPHADVHVL  253 (348)
T ss_dssp             CSSEEEEEETCTTSHHHHHHHHHCTTEE---EEEEECHHH-H--TTCCCCCGGGTTSEEEEECCTTT---CCCCCSEEEE
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCCEE---EEECCCHHH-H--HHHHHHCCCCCCCEEEECCCCCC---CCCCCEEEEE
T ss_conf             8776699758998689999884389838---995361777-6--66665334678836884476323---6877509987


Q ss_pred             CCCCC-H-----HHHHHHHHHHHC
Q ss_conf             14799-8-----999998488520
Q gi|254780807|r  148 RALAD-L-----DTLLEYSFPWLY  165 (168)
Q Consensus       148 RA~a~-l-----~~ll~~~~pllk  165 (168)
                      +.+-. +     ..++.-+..-|+
T Consensus       254 ~~vlh~~~d~~~~~iL~~~~~~L~  277 (348)
T 3lst_A          254 KRILHNWGDEDSVRILTNCRRVMP  277 (348)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHTCC
T ss_pred             ECCHHCCCHHHHHHHHHHHHHHCC
T ss_conf             510213999999999999999669


No 210
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant protein; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=84.77  E-value=1.3  Score=23.14  Aligned_cols=67  Identities=12%  Similarity=0.144  Sum_probs=46.0

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             34431111146773356565227554663478750000389999999997389--8099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ...+++|||.|.|.=++-++=.+|+++   +++.|        +.+++...+.  +++++.+...+  + ...+|+++.|
T Consensus       193 ~~~~vvDvGGG~G~~~~~l~~~~P~l~---~~v~D--------lp~vi~~a~~~~ri~~~~gDff~--~-~p~~D~~~l~  258 (358)
T 1zg3_A          193 GLESLVDVGGGTGGVTKLIHEIFPHLK---CTVFD--------QPQVVGNLTGNENLNFVGGDMFK--S-IPSADAVLLK  258 (358)
T ss_dssp             TCSEEEEETCTTSHHHHHHHHHCTTSE---EEEEE--------CHHHHSSCCCCSSEEEEECCTTT--C-CCCCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHCCCCC---EEEEC--------CHHHHHCCCCCCCEEEECCCCCC--C-CCCCCEEEEE
T ss_conf             875699808985399999998689976---27841--------77887454767727997177667--7-8886779986


Q ss_pred             CCC
Q ss_conf             479
Q gi|254780807|r  149 ALA  151 (168)
Q Consensus       149 A~a  151 (168)
                      -+-
T Consensus       259 ~vl  261 (358)
T 1zg3_A          259 WVL  261 (358)
T ss_dssp             SCG
T ss_pred             ECC
T ss_conf             123


No 211
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=83.49  E-value=2.4  Score=21.54  Aligned_cols=74  Identities=14%  Similarity=0.157  Sum_probs=52.6

Q ss_pred             CCCCEEECCCCC-HHHHHHHHC--CCCCCCCEEEEEHHHHHHH----HHHHHHHHHHCCCCEEE--ECHHHHHHHCCCCC
Q ss_conf             443111114677-335656522--7554663478750000389----99999999738980998--04266533124798
Q gi|254780807|r   72 PSIWIDLGSGGG-FPGIITSIQ--LSSIEGGLVNLIESKNKKA----SFLRYVVQKTAARGKVF--ACRIQEAPQMITTC  142 (168)
Q Consensus        72 ~~~ilDiGSGaG-fPGi~laI~--~p~~~~~~v~Lves~~KK~----~FL~~~~~~L~L~~~vi--~~r~e~~~~~~~~~  142 (168)
                      +-++.=||.|+- .|+++..++  .|+++...+.|+|-.+.|.    .+.+.++++.+.+.++.  ..|.|-+.    ..
T Consensus        28 ~~KI~iIGaGS~~t~~li~~~~~~~~~l~~~ei~L~DId~~rL~~~~~~~~~~~~~~~~~~~v~~ttD~~eAl~----gA  103 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFT----DV  103 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHS----SC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHC----CC
T ss_conf             62399989865656899999996053278888999828888999999999999996099807999589999857----99


Q ss_pred             CEEEECC
Q ss_conf             6999914
Q gi|254780807|r  143 DVISARA  149 (168)
Q Consensus       143 d~v~sRA  149 (168)
                      |+|+.-+
T Consensus       104 DfVi~t~  110 (472)
T 1u8x_X          104 DFVMAHI  110 (472)
T ss_dssp             SEEEECC
T ss_pred             CEEEEEE
T ss_conf             9999841


No 212
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=83.11  E-value=2.5  Score=21.45  Aligned_cols=82  Identities=21%  Similarity=0.247  Sum_probs=53.8

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHHHH----C-CCCEEEECHHHH-HHHCCC
Q ss_conf             0123443111114677335656522-75546634787500003899999999973----8-980998042665-331247
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKT----A-ARGKVFACRIQE-APQMIT  140 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~~L----~-L~~~vi~~r~e~-~~~~~~  140 (168)
                      ..+.+++++=||.|+|-  ++-.+. +|..  .++++||-.+.-+...++--...    . -+.+++.+.+.+ +.+...
T Consensus        87 ~~~~pk~VLiiGgG~G~--~~~e~l~~~~~--~~v~~VEID~~Vi~~a~~~~~~~~~~~~d~rv~ii~~Da~~~l~~~~~  162 (296)
T 1inl_A           87 LHPNPKKVLIIGGGDGG--TLREVLKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKN  162 (296)
T ss_dssp             HSSSCCEEEEEECTTCH--HHHHHTTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSS
T ss_pred             HCCCCCEEEEECCCCHH--HHHHHHHCCCC--CCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCCC
T ss_conf             19997879998798279--99999964997--717886357899999998767622433699608996148999974788


Q ss_pred             CCCEEEECCCCCH
Q ss_conf             9869999147998
Q gi|254780807|r  141 TCDVISARALADL  153 (168)
Q Consensus       141 ~~d~v~sRA~a~l  153 (168)
                      +||+|+.=++.|.
T Consensus       163 ~yDvIi~D~~dp~  175 (296)
T 1inl_A          163 EFDVIIIDSTDPT  175 (296)
T ss_dssp             CEEEEEEEC----
T ss_pred             CCCEEEEECCCCC
T ss_conf             7768999089865


No 213
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=78.89  E-value=0.14  Score=28.72  Aligned_cols=59  Identities=15%  Similarity=0.106  Sum_probs=38.6

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEECHHHHHH
Q ss_conf             234431111146773356565227554663478750000389999999997389--8099804266533
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAP  136 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~~r~e~~~  136 (168)
                      ..+..|++||.|-|-=--.  ++.   ...+|++||...+-+..++   +++..  +.+++++.+.++.
T Consensus        28 ~~~d~VlEIGpG~G~LT~~--L~~---~~~~v~aiE~D~~l~~~l~---~~~~~~~n~~ii~~D~l~~~   88 (245)
T 1yub_A           28 KETDTVYEIGTGKGHLTTK--LAK---ISKQVTSIELDSHLFNLSS---EKLKLNTRVTLIHQDILQFQ   88 (245)
T ss_dssp             CSSEEEEECSCCCSSCSHH--HHH---HSSEEEESSSSCSSSSSSS---CTTTTCSEEEECCSCCTTTT
T ss_pred             CCCCEEEEECCCHHHHHHH--HHH---CCCCCEEECCCHHHHHHHH---HHHHCCCCCHHHHCCHHCCC
T ss_conf             9999689979973599999--996---1650040340446689887---55411340002201100014


No 214
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=76.43  E-value=4.2  Score=20.17  Aligned_cols=75  Identities=13%  Similarity=0.159  Sum_probs=44.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC----------CCCEEEECHHHHHHHCCC
Q ss_conf             3443111114677335656522755466347875000038999999999738----------980998042665331247
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA----------ARGKVFACRIQEAPQMIT  140 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~----------L~~~vi~~r~e~~~~~~~  140 (168)
                      ...+++|+|.|-|  .+.-.++.....-..+..+|-+.+-.   +.+...|.          +.++.+++.+.+.-....
T Consensus       721 ~akkVlDLGCGEG--kLL~~LL~~~~~iE~IvGVDIS~~~L---e~A~~rL~~dl~~~r~r~~~V~LyqGSIt~~D~RL~  795 (950)
T 3htx_A          721 SASTLVDFGCGSG--SLLDSLLDYPTSLQTIIGVDISPKGL---ARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLH  795 (950)
T ss_dssp             CCSEEEEETCSSS--HHHHHHTSSCCCCCEEEEEESCHHHH---HHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSC
T ss_pred             CCCEEEECCCCCC--HHHHHHHCCCCCEEEEEEEECCHHHH---HHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf             9988997388870--99999862876600799997799999---999874484113544576568999446555243104


Q ss_pred             CCCEEEECCC
Q ss_conf             9869999147
Q gi|254780807|r  141 TCDVISARAL  150 (168)
Q Consensus       141 ~~d~v~sRA~  150 (168)
                      .||.+|+=-|
T Consensus       796 GfDAvV~iEV  805 (950)
T 3htx_A          796 DVDIGTCLEV  805 (950)
T ss_dssp             SCCEEEEESC
T ss_pred             CCCEEEEEEE
T ss_conf             8876998987


No 215
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, NAD dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=76.22  E-value=4.2  Score=20.14  Aligned_cols=72  Identities=13%  Similarity=0.089  Sum_probs=36.1

Q ss_pred             CEEECCCC-CHHHHHHHHC--CCCCCCCEEEEEHHHHHHHHHHHHHHHHHC-CCCEE--EECHHHHHHHCCCCCCEEEEC
Q ss_conf             11111467-7335656522--755466347875000038999999999738-98099--804266533124798699991
Q gi|254780807|r   75 WIDLGSGG-GFPGIITSIQ--LSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKV--FACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        75 ilDiGSGa-GfPGi~laI~--~p~~~~~~v~Lves~~KK~~FL~~~~~~L~-L~~~v--i~~r~e~~~~~~~~~d~v~sR  148 (168)
                      +.=||+|+ |||.+..+++  .+.+....+.|+|-+..|........+++- -+..+  ...+-|.+    ...|+|+.-
T Consensus         5 I~iIGaGS~~~~~~~~~~~~~~~~l~~~ei~L~DId~~rl~~~~~l~~~~~~~~~~v~~t~d~~~al----~gAD~Vv~t   80 (417)
T 1up7_A            5 IAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAV----VDAKYVIFQ   80 (417)
T ss_dssp             EEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHH----TTCSEEEEC
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH----CCCCEEEEE
T ss_conf             9998978889999999998261006899899985998999999999986640697299977889984----799999994


Q ss_pred             CC
Q ss_conf             47
Q gi|254780807|r  149 AL  150 (168)
Q Consensus       149 A~  150 (168)
                      |-
T Consensus        81 ~~   82 (417)
T 1up7_A           81 FR   82 (417)
T ss_dssp             CC
T ss_pred             EC
T ss_conf             23


No 216
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=75.44  E-value=4.4  Score=20.01  Aligned_cols=70  Identities=10%  Similarity=0.032  Sum_probs=42.9

Q ss_pred             EEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
Q ss_conf             0430899999898646356431001234431111146773356565227554663478750000389999999997
Q gi|254780807|r   45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK  120 (168)
Q Consensus        45 Lts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~  120 (168)
                      ++|.+|.-.-    +..++.-.......++++=+|+||+--++..+...-  ....++++.++..|..-+.+....
T Consensus       104 l~G~NTD~~G----f~~~l~~~~~~~~~~~vlilGaGGaarai~~al~~~--~~~~i~i~nR~~~~a~~l~~~~~~  173 (283)
T 3jyo_A          104 TTGHNTDVSG----FGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTH--GVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_dssp             EEEECHHHHH----HHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEECCCCHH----HHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             7754577234----544000235456787579966661678899999974--986000013678999999999976


No 217
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=73.60  E-value=4.9  Score=19.74  Aligned_cols=73  Identities=14%  Similarity=0.057  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHHHCCC--CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHH
Q ss_conf             986463564310012--344311111467733565652275546634787500003899999999973898099804266
Q gi|254780807|r   56 IRHVEDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ  133 (168)
Q Consensus        56 ~rHi~DSl~~~~~~~--~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e  133 (168)
                      ..-|+|.+.+.+...  .+..|+|||-|.|.  +--++.. ..+..+++++|....=+.+|++...  +-+..+++..+-
T Consensus        41 ~~kIv~~l~l~~~~~~~~~~~IlEIgPG~G~--lT~~Ll~-~~~pk~~i~iE~D~~~~~~L~~~~~--~~~~~ii~~D~l  115 (353)
T 1i4w_A           41 YNKIFDKLDLTKTYKHPEELKVLDLYPGVGI--QSAIFYN-KYCPRQYSLLEKRSSLYKFLNAKFE--GSPLQILKRDPY  115 (353)
T ss_dssp             HHHHHHHHCGGGTCCCTTTCEEEEESCTTCH--HHHHHHH-HHCCSEEEEECCCHHHHHHHHHHTT--TSSCEEECSCTT
T ss_pred             HHHHHHHHCCCCCCCCCCCCEEEEECCCCCH--HHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHC--CCCCEEEECCHH
T ss_conf             9999987367633357789969998999889--9999985-2588769999777889999998714--588479946456


No 218
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=72.69  E-value=0.41  Score=25.97  Aligned_cols=81  Identities=7%  Similarity=-0.018  Sum_probs=46.5

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHH---HHHCCCCEEEECHHHHHHHCCCCCCE
Q ss_conf             012344311111467733565652275546634787500003899999999---97389809980426653312479869
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV---QKTAARGKVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~---~~L~L~~~vi~~r~e~~~~~~~~~d~  144 (168)
                      ..+++++++-||.|+|  |.+-.++. .  ..++++||-.++-+...++--   ..-..+..+-.+| +-+.....+||+
T Consensus        69 ~hp~pk~VLiIGgG~G--~~~re~lk-~--~~~v~~VEiD~~Vi~~a~~~fp~~~d~r~~~~~~D~~-~~l~~~~~~yDv  142 (262)
T 2cmg_A           69 TKKELKEVLIVDGFDL--ELAHQLFK-Y--DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAK-QLLDLDIKKYDL  142 (262)
T ss_dssp             TSSCCCEEEEESSCCH--HHHHHHTT-S--SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEES-SGGGSCCCCEEE
T ss_pred             CCCCCCEEEEECCCCH--HHHHHHHC-C--CCEEEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHH-HHHHHCCCCCCE
T ss_conf             3998677999459966--99999845-8--9747999838999999998684223543360155799-998615467788


Q ss_pred             EEECCCCCHH
Q ss_conf             9991479989
Q gi|254780807|r  145 ISARALADLD  154 (168)
Q Consensus       145 v~sRA~a~l~  154 (168)
                      |+.=+..|..
T Consensus       143 Ii~D~~dp~~  152 (262)
T 2cmg_A          143 IFCLQEPDIH  152 (262)
T ss_dssp             EEESSCCCHH
T ss_pred             EEECCCCCCH
T ss_conf             9988999731


No 219
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca YX}
Probab=72.07  E-value=2.5  Score=21.48  Aligned_cols=74  Identities=19%  Similarity=0.231  Sum_probs=43.2

Q ss_pred             CCCEEECCCCCHHHHHHHHC---CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHH------HHHCCCCCC
Q ss_conf             43111114677335656522---755466347875000038999999999738980998042665------331247986
Q gi|254780807|r   73 SIWIDLGSGGGFPGIITSIQ---LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE------APQMITTCD  143 (168)
Q Consensus        73 ~~ilDiGSGaGfPGi~laI~---~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~------~~~~~~~~d  143 (168)
                      ..++|+|||-|-.|-+..++   .|+-   +|+.||...--+..-+......+ +..++...+.+      .+.....||
T Consensus        79 rqfLDlGcG~gt~~~~he~a~~~~P~a---rVv~vD~dp~~la~ara~l~~~~-~~~~v~aD~~~p~~il~~~~~~~~~D  154 (274)
T 2qe6_A           79 SQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDP-NTAVFTADVRDPEYILNHPDVRRMID  154 (274)
T ss_dssp             CEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCT-TEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred             CEEEEECCCCCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHCCCC-CEEEEECCCCCHHHHHCCHHHHCCCC
T ss_conf             789994738898641999999878997---79999597889999876504799-76899743027343422524533478


Q ss_pred             -----EEEECCC
Q ss_conf             -----9999147
Q gi|254780807|r  144 -----VISARAL  150 (168)
Q Consensus       144 -----~v~sRA~  150 (168)
                           .|++-++
T Consensus       155 ~~~Pvav~~~~v  166 (274)
T 2qe6_A          155 FSRPAAIMLVGM  166 (274)
T ss_dssp             TTSCCEEEETTT
T ss_pred             CCCCEEEEEEEE
T ss_conf             667726866700


No 220
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=71.41  E-value=5.6  Score=19.44  Aligned_cols=55  Identities=18%  Similarity=0.204  Sum_probs=30.7

Q ss_pred             CCEEECCCC-CHHHHHHHH--CCCCCCCCEEEEEHHHHHHHHHH----HHHHHHHCCCCEEE
Q ss_conf             311111467-733565652--27554663478750000389999----99999738980998
Q gi|254780807|r   74 IWIDLGSGG-GFPGIITSI--QLSSIEGGLVNLIESKNKKASFL----RYVVQKTAARGKVF  128 (168)
Q Consensus        74 ~ilDiGSGa-GfPGi~laI--~~p~~~~~~v~Lves~~KK~~FL----~~~~~~L~L~~~vi  128 (168)
                      ++.=||.|+ |||..+++.  ..+.+....+.|+|-...|....    ++++++.+.+.++.
T Consensus         5 KI~iIGaGs~~~~~~~~~~~~~~~~l~~~ei~L~Did~~rl~~~~~~~~~~~~~~~~~~~i~   66 (480)
T 1obb_A            5 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE   66 (480)
T ss_dssp             EEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             59999987333069999999847578999899986987799999999999998729982899


No 221
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=70.74  E-value=1.9  Score=22.13  Aligned_cols=67  Identities=7%  Similarity=-0.069  Sum_probs=39.5

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             344311111467733565652275546634787500003899999999973898099804266533124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      .+.+|+|-++|.|  ++..++..-......++.+|-...-+        ++--.+.++++..-... ...+||+|++-
T Consensus        39 ~~~~IlDPacGsG--~FL~~~~~~~~~~~~i~G~did~~~~--------~la~~~~i~~~D~l~~~-~~~~fD~VigN  105 (421)
T 2ih2_A           39 RGGRVLEPACAHG--PFLRAFREAHGTAYRFVGVEIDPKAL--------DLPPWAEGILADFLLWE-PGEAFDLILGN  105 (421)
T ss_dssp             TTCEEEEETCTTC--HHHHHHHHHHCSCSEEEEEESCTTTC--------CCCTTEEEEESCGGGCC-CSSCEEEEEEC
T ss_pred             CCCEEEECCCCHH--HHHHHHHHHCCCCCEEEEEECCHHHH--------HHHHHHHHHHCCCCCCC-CCCCCCEEEEC
T ss_conf             9699996877646--99999998677678699997989999--------99997427737733368-54577778725


No 222
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=67.15  E-value=6.9  Score=18.91  Aligned_cols=82  Identities=13%  Similarity=0.191  Sum_probs=53.2

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCC-CCCCCCEEEEEHHHHHHHHHHHHHHHHH--CC---CCEEEECHHH-HHHHCC-
Q ss_conf             01234431111146773356565227-5546634787500003899999999973--89---8099804266-533124-
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQL-SSIEGGLVNLIESKNKKASFLRYVVQKT--AA---RGKVFACRIQ-EAPQMI-  139 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~-p~~~~~~v~Lves~~KK~~FL~~~~~~L--~L---~~~vi~~r~e-~~~~~~-  139 (168)
                      ..+++++++=||.|+|  |++-.+.. +..  .++++||-.+.-+...++.-...  .+   +++++.+.+- -+.+.. 
T Consensus       117 ~h~~PkrVLIIGgGdG--~~~revlk~~~v--~~v~~VEID~~Vi~~a~~~fp~~~~~~~dprv~iii~Dg~~~l~~~~~  192 (334)
T 1xj5_A          117 SIPNPKKVLVIGGGDG--GVLREVARHASI--EQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAE  192 (334)
T ss_dssp             TSSCCCEEEEETCSSS--HHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCT
T ss_pred             CCCCCCEEEEECCCCH--HHHHHHHHCCCC--CCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHCCC
T ss_conf             1999886999889948--999999974996--533575058999999997534430235799879998627999751533


Q ss_pred             CCCCEEEECCCCCH
Q ss_conf             79869999147998
Q gi|254780807|r  140 TTCDVISARALADL  153 (168)
Q Consensus       140 ~~~d~v~sRA~a~l  153 (168)
                      .+||+|+.=++.|.
T Consensus       193 ~~yDvIIvD~~dp~  206 (334)
T 1xj5_A          193 GSYDAVIVDSSDPI  206 (334)
T ss_dssp             TCEEEEEECCCCTT
T ss_pred             CCCCEEEEECCCCC
T ss_conf             56677999789988


No 223
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, antibiotic resistance, methyltransferase; 1.44A {Aquifex aeolicus VF5} PDB: 3ftc_A 3fte_A 3ftf_A*
Probab=63.93  E-value=8  Score=18.54  Aligned_cols=58  Identities=14%  Similarity=0.131  Sum_probs=36.4

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHHHH
Q ss_conf             234431111146773356565227554663478750000389999999997389-809980426653
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA  135 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e~~  135 (168)
                      ..+..|++||.|-|.  +--+++...  ...|+.+|...+=+.+|+    ...- +.+++++.+-.+
T Consensus        30 ~~~d~VlEIGpG~G~--LT~~Ll~~~--~~~v~aiE~D~~l~~~l~----~~~~~~~~ii~~D~l~~   88 (249)
T 3ftd_A           30 EEGNTVVEVGGGTGN--LTKVLLQHP--LKKLYVIELDREMVENLK----SIGDERLEVINEDASKF   88 (249)
T ss_dssp             CTTCEEEEEESCHHH--HHHHHTTSC--CSEEEEECCCHHHHHHHT----TSCCTTEEEECSCTTTC
T ss_pred             CCCCEEEEECCCCCH--HHHHHHHHC--CCEEEEEEECCCCHHHHH----HHCCCCEEEEECCHHHC
T ss_conf             998949996998769--899999704--570789998662001322----22044328996340117


No 224
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=59.54  E-value=4.3  Score=20.08  Aligned_cols=64  Identities=20%  Similarity=0.227  Sum_probs=39.7

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-C-C-EE-EECHH-HHHHHCCCCCCEE
Q ss_conf             34431111146773356565227554663478750000389999999997389-8-0-99-80426-6533124798699
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R-G-KV-FACRI-QEAPQMITTCDVI  145 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~-~-~v-i~~r~-e~~~~~~~~~d~v  145 (168)
                      +..+|+|+|||.-.  =+|+.+=|+..   |+++|++.        .++.++. + + +. +...- -..-..-..+|.+
T Consensus       827 ~~~~~lDlGTGPE~--RiLSLiP~d~p---vtm~D~RP--------~ae~~~~w~~~~T~f~~~Dyl~~~~~n~~~~D~v  893 (1299)
T 3iyl_W          827 NLAHLLDLGTGPEC--RILSLIPPTLQ---VTMSDSRP--------CAELMASFDPALTAYVQGDYSTAAFWNGIRCDSA  893 (1299)
T ss_dssp             GGCSEEEETCCSSC--SGGGSSCTTSC---EEEEESSC--------CSSCGGGBCTTTEEEEESCSSSGGGGSSCCCSEE
T ss_pred             CHHEEEECCCCCCC--EEEEECCCCCC---EEEECCCC--------CHHHHCCCCCCCCEEEEECCCCCCEEECCCCCEE
T ss_conf             60003661689751--25531599995---47860566--------4123214564334057713213305506787579


Q ss_pred             EE
Q ss_conf             99
Q gi|254780807|r  146 SA  147 (168)
Q Consensus       146 ~s  147 (168)
                      +|
T Consensus       894 t~  895 (1299)
T 3iyl_W          894 TA  895 (1299)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             99


No 225
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=57.40  E-value=10  Score=17.93  Aligned_cols=64  Identities=16%  Similarity=0.299  Sum_probs=35.8

Q ss_pred             HHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEC-------CHHHHHHHHHHHHHHHHHCCCC---CCCCEEECCCCCHH
Q ss_conf             6417999899999999999999846321304308-------9999989864635643100123---44311111467733
Q gi|254780807|r   16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSS-------TVEDFWIRHVEDSLRVFQLHPY---PSIWIDLGSGGGFP   85 (168)
Q Consensus        16 ~~~~~ls~eq~~~l~~y~~ll~~~N~~~NLts~~-------~~~~~~~rHi~DSl~~~~~~~~---~~~ilDiGSGaGfP   85 (168)
                      ...|+++.++...+.   ++....|  .+++|.-       ...+.|.+.+..+..++.....   .-.++|||  ||||
T Consensus       167 ~sKFGi~~~~~~~~~---~~~k~~~--l~l~Glh~H~GS~~~d~~~~~~~i~~~~~~~~~~~~~g~~~~~idiG--GGf~  239 (448)
T 3btn_A          167 NMKFGTTLKNCRHLL---ECAKELD--VQIIGVKFHVSSACKEYQVYVHALSDARCVFDMAGEFGFTMNMLDIG--GGFT  239 (448)
T ss_dssp             -CCCCBCHHHHHHHH---HHHHHHT--CEEEEEECCCCTTCCCTTHHHHHHHHHHHHHHHHHHTTCCCCEEECC--SCCC
T ss_pred             CCCCCCCHHHHHHHH---HHHHCCC--CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC--CCCC
T ss_conf             666687778999887---7762288--17856455413654654879999999999999999829953676215--7666


Q ss_pred             H
Q ss_conf             5
Q gi|254780807|r   86 G   86 (168)
Q Consensus        86 G   86 (168)
                      +
T Consensus       240 ~  240 (448)
T 3btn_A          240 G  240 (448)
T ss_dssp             S
T ss_pred             C
T ss_conf             5


No 226
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, joint center for structural genomics, JCSG; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=56.72  E-value=11  Score=17.80  Aligned_cols=52  Identities=15%  Similarity=0.002  Sum_probs=36.5

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
Q ss_conf             34431111146773356565227554663478750000389999999997389
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA  123 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L  123 (168)
                      ++..++|+|+--|.=...++-..+. ...+|+.+|++++=..-|++-++....
T Consensus       226 ~nevfIDVGAniG~~s~~f~~~~~~-~~~kV~AFEPnp~n~~~L~~Ni~~n~~  277 (409)
T 2py6_A          226 DSEKMVDCGASIGESLAGLIGVTKG-KFERVWMIEPDRINLQTLQNVLRRYTD  277 (409)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHHTS-CCSEEEEECCCHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEECCCCCCHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHHHHHHCCC
T ss_conf             9988999885888889999996689-999899994878999999999986422


No 227
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initiative; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=55.66  E-value=11  Score=17.69  Aligned_cols=75  Identities=13%  Similarity=0.215  Sum_probs=44.8

Q ss_pred             CCCEEECCCC-CHHHHHHHHC--CCCCCCCEEEEEHHHH--HHHHHH----HHHHHHHCCCCEEEE--CHHHHHHHCCCC
Q ss_conf             4311111467-7335656522--7554663478750000--389999----999997389809980--426653312479
Q gi|254780807|r   73 SIWIDLGSGG-GFPGIITSIQ--LSSIEGGLVNLIESKN--KKASFL----RYVVQKTAARGKVFA--CRIQEAPQMITT  141 (168)
Q Consensus        73 ~~ilDiGSGa-GfPGi~laI~--~p~~~~~~v~Lves~~--KK~~FL----~~~~~~L~L~~~vi~--~r~e~~~~~~~~  141 (168)
                      -+|.=||.|+ ++|++..+.+  .+.+....+.|+|-.+  .|...+    +++....+.+..+..  .|.|.+.    .
T Consensus         8 ~KI~iIGaGS~~~~~~~~~~~~~~~~l~~~ei~L~Di~~~~~rl~~~~~~~~~~~~~~~~~~~v~~~tD~~~Al~----~   83 (450)
T 1s6y_A            8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALD----G   83 (450)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHT----T
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHC----C
T ss_conf             869999987567899999999733116899899986998888899999999999986199829999689899848----9


Q ss_pred             CCEEEECCCC
Q ss_conf             8699991479
Q gi|254780807|r  142 CDVISARALA  151 (168)
Q Consensus       142 ~d~v~sRA~a  151 (168)
                      .|+|+.-|-.
T Consensus        84 ad~Vv~t~~v   93 (450)
T 1s6y_A           84 ADFVTTQFRV   93 (450)
T ss_dssp             CSEEEECCCT
T ss_pred             CCEEEECCCC
T ss_conf             9999989675


No 228
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=54.02  E-value=7.6  Score=18.66  Aligned_cols=64  Identities=13%  Similarity=0.146  Sum_probs=39.6

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CC-E-EEECHHH-HHHHCCCCCCEEE
Q ss_conf             34431111146773356565227554663478750000389999999997389-80-9-9804266-5331247986999
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG-K-VFACRIQ-EAPQMITTCDVIS  146 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~-~-vi~~r~e-~~~~~~~~~d~v~  146 (168)
                      ..+.|+|+|||.-.  =+|+.+=|+..   |+++|++.        .++.++. +. + .+...-- ..--.-..+|.++
T Consensus       821 ~~~~~lDlGTGPEa--RiLsLiP~~~p---vtm~D~RP--------~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt  887 (1289)
T 1ej6_A          821 DGDVVLDLGTGPEA--KILELIPATSP---VTCVDIRP--------TAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVT  887 (1289)
T ss_dssp             TTCCEEEESCCSSC--GGGGTSCTTSC---EEEEESSC--------CCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEE
T ss_pred             CCCEEEEECCCCCC--EEEEECCCCCC---EEEEECCC--------CHHHHCCCCCCCEEEEECCCCCCEEECCCCCEEE
T ss_conf             46679980689751--35642489995---47860566--------4112034465650578122133155057875799


Q ss_pred             E
Q ss_conf             9
Q gi|254780807|r  147 A  147 (168)
Q Consensus       147 s  147 (168)
                      |
T Consensus       888 c  888 (1289)
T 1ej6_A          888 C  888 (1289)
T ss_dssp             E
T ss_pred             E
T ss_conf             8


No 229
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=50.29  E-value=4.5  Score=19.99  Aligned_cols=41  Identities=5%  Similarity=0.096  Sum_probs=17.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCC------EEEECCHHHHHHHHHHH
Q ss_conf             998999999999999998463213------04308999998986463
Q gi|254780807|r   21 VSRETLEKLEYFYFLFLKWSKKIN------LVSSSTVEDFWIRHVED   61 (168)
Q Consensus        21 ls~eq~~~l~~y~~ll~~~N~~~N------Lts~~~~~~~~~rHi~D   61 (168)
                      .+......+..+...+.++.....      -....+..++..++..+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~  180 (433)
T 1d5t_A          134 MGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLG  180 (433)
T ss_dssp             SCHHHHHHHHHHHHHHHHCCTTCGGGGTTCCTTTSBHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
T ss_conf             33345666778999999876520222222111336699999862146


No 230
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=49.47  E-value=4.8  Score=19.80  Aligned_cols=21  Identities=5%  Similarity=0.086  Sum_probs=10.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHCC
Q ss_conf             998999999999999998463
Q gi|254780807|r   21 VSRETLEKLEYFYFLFLKWSK   41 (168)
Q Consensus        21 ls~eq~~~l~~y~~ll~~~N~   41 (168)
                      ++......+..|......++.
T Consensus       142 l~~~~k~~l~k~l~~~~~~~~  162 (453)
T 2bcg_G          142 MGIFEKRRMKKFLEWISSYKE  162 (453)
T ss_dssp             SCHHHHHHHHHHHHHHHHCBT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH
T ss_conf             235678889999877544201


No 231
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesis; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A*
Probab=45.51  E-value=7.2  Score=18.79  Aligned_cols=25  Identities=24%  Similarity=0.270  Sum_probs=18.1

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf             479869999147998999998488520
Q gi|254780807|r  139 ITTCDVISARALADLDTLLEYSFPWLY  165 (168)
Q Consensus       139 ~~~~d~v~sRA~a~l~~ll~~~~pllk  165 (168)
                      ...||.|++-  +|++.+.+++.+-|.
T Consensus       224 ~~~~d~vI~T--~pld~l~~~~~~~L~  248 (384)
T 2bi7_A          224 RTHYDHVFYS--GPLDAFYGYQYGRLG  248 (384)
T ss_dssp             GGGSSEEEEC--SCHHHHTTTTTCCCC
T ss_pred             HHCCCEEEEE--CCHHHHHHHHCCCCC
T ss_conf             2036659993--583999975435676


No 232
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=43.57  E-value=18  Score=16.57  Aligned_cols=27  Identities=15%  Similarity=0.133  Sum_probs=16.3

Q ss_pred             CCCCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf             7986999914799899999848852067
Q gi|254780807|r  140 TTCDVISARALADLDTLLEYSFPWLYQK  167 (168)
Q Consensus       140 ~~~d~v~sRA~a~l~~ll~~~~pllk~k  167 (168)
                      ..+|-+.++-| ..+.|.+.-..++..+
T Consensus       104 ~G~~~~l~KP~-~~~~L~~~l~~~l~~r  130 (136)
T 1dcf_A          104 FGLDGVLLKPV-SLDNIRDVLSDLLEPR  130 (136)
T ss_dssp             TTCCEEEESSC-CHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEECCC-CHHHHHHHHHHHHCCH
T ss_conf             69998998989-9999999999996003


No 233
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium}
Probab=42.33  E-value=7.3  Score=18.77  Aligned_cols=72  Identities=18%  Similarity=0.272  Sum_probs=38.9

Q ss_pred             HHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC-CEEEECHHHH---------H
Q ss_conf             10012344311111467733565652275546634787500003899999999973898-0998042665---------3
Q gi|254780807|r   66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE---------A  135 (168)
Q Consensus        66 ~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~-~~vi~~r~e~---------~  135 (168)
                      +.+++++.+++|+|++.|  |-.-.+...   ...+..+|-..-.           ..+ +..+.+.+-+         .
T Consensus        20 f~l~k~~~~vlDLg~aPG--gw~q~~~~~---~~~v~~vd~~~~~-----------~~~~v~~~~gD~~~~~~~~~~~~~   83 (191)
T 3dou_A           20 YRVVRKGDAVIEIGSSPG--GWTQVLNSL---ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRA   83 (191)
T ss_dssp             HCCSCTTCEEEEESCTTC--HHHHHHTTT---CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHH
T ss_pred             HCCCCCCCEEEEEEECCC--CCEEEEEEC---CCCEEEEECCCCC-----------CCCCEEEECCCCCCHHHHHHHHHH
T ss_conf             487679987998410298--064876612---6622655045565-----------667817852555425688988887


Q ss_pred             --HHCCCCCCEEEECCCCCH
Q ss_conf             --312479869999147998
Q gi|254780807|r  136 --PQMITTCDVISARALADL  153 (168)
Q Consensus       136 --~~~~~~~d~v~sRA~a~l  153 (168)
                        .....++|+|+|=+-.+.
T Consensus        84 ~~~~~~~~~DlVlSD~ap~~  103 (191)
T 3dou_A           84 LREEGIEKVDDVVSDAMAKV  103 (191)
T ss_dssp             HHHHTCSSEEEEEECCCCCC
T ss_pred             HHHCCCCCCCEEECCCCCCC
T ss_conf             76504786688980464467


No 234
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=41.74  E-value=19  Score=16.40  Aligned_cols=134  Identities=7%  Similarity=-0.026  Sum_probs=56.4

Q ss_pred             CCCCHH-HHHHHHHHHHHHHHHCCCCCEEEE----------CCHHHHHH----HHHHHHHHHHH----CC--CCCCCCEE
Q ss_conf             799989-999999999999984632130430----------89999989----86463564310----01--23443111
Q gi|254780807|r   19 YNVSRE-TLEKLEYFYFLFLKWSKKINLVSS----------STVEDFWI----RHVEDSLRVFQ----LH--PYPSIWID   77 (168)
Q Consensus        19 ~~ls~e-q~~~l~~y~~ll~~~N~~~NLts~----------~~~~~~~~----rHi~DSl~~~~----~~--~~~~~ilD   77 (168)
                      .+++++ +++.   +.+.+.++.....|+.-          ....+.|.    -.+.-...+.+    ..  ....+++-
T Consensus        63 ~Dvs~~~~v~~---~~~~i~~~~~~d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~g~Ii~  139 (252)
T 3h7a_A           63 LDARNEDEVTA---FLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFF  139 (252)
T ss_dssp             CCTTCHHHHHH---HHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CCCCCHHHHHH---HHHHHHHCCCEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             77689999998---887776427501230143215777755599999999999875678899999999998769988999


Q ss_pred             ECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC---CC-EEEE-CHHHH-----H-HHCCCCCCEEE
Q ss_conf             1146773356565227554663478750000389999999997389---80-9980-42665-----3-31247986999
Q gi|254780807|r   78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA---RG-KVFA-CRIQE-----A-PQMITTCDVIS  146 (168)
Q Consensus        78 iGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L---~~-~vi~-~r~e~-----~-~~~~~~~d~v~  146 (168)
                      ++|.+|+-|.|-...|          .=++.==..|.+....++.-   .+ .++. +-+..     . .+.........
T Consensus       140 isS~~~~~~~~~~~~Y----------~asKaal~~lt~~la~e~~~~gi~V~~~~~pg~v~t~~~~~~~~~~~~~~~~~~  209 (252)
T 3h7a_A          140 TGATASLRGGSGFAAF----------ASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALAN  209 (252)
T ss_dssp             EEEGGGTCCCTTCHHH----------HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------
T ss_pred             ECCHHHCCCCCCCHHH----------HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             7874425789995779----------999999999999999986065887999958987387555540466656641268


Q ss_pred             ECCCCCHHHHHHHHHHHHC
Q ss_conf             9147998999998488520
Q gi|254780807|r  147 ARALADLDTLLEYSFPWLY  165 (168)
Q Consensus       147 sRA~a~l~~ll~~~~pllk  165 (168)
                      ...+++++.+.+...-++.
T Consensus       210 ~~~~~~PedIA~~v~fl~s  228 (252)
T 3h7a_A          210 PDLLMPPAAVAGAYWQLYQ  228 (252)
T ss_dssp             ----CCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHC
T ss_conf             7778199999999999978


No 235
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=39.44  E-value=7.7  Score=18.62  Aligned_cols=21  Identities=14%  Similarity=0.235  Sum_probs=12.0

Q ss_pred             CCCCCCEEEECCCCCHHHHHHHH
Q ss_conf             24798699991479989999984
Q gi|254780807|r  138 MITTCDVISARALADLDTLLEYS  160 (168)
Q Consensus       138 ~~~~~d~v~sRA~a~l~~ll~~~  160 (168)
                      ....+|.+++=  +|++.+....
T Consensus       234 ~~~~~d~ii~t--~p~~~~~~~~  254 (399)
T 1v0j_A          234 PGSPAAPVVYT--GPLDRYFDYA  254 (399)
T ss_dssp             TTSTTCCEEEC--SCHHHHTTTT
T ss_pred             CCCCCCEEECC--CCHHHHHHHH
T ss_conf             55554138756--8718988631


No 236
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=39.22  E-value=21  Score=16.17  Aligned_cols=76  Identities=11%  Similarity=-0.011  Sum_probs=37.3

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCC--CCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CC-EEEECHHHH--H-HHCCCC
Q ss_conf             234431111146773356565227--554663478750000389999999997389--80-998042665--3-312479
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQL--SSIEGGLVNLIESKNKKASFLRYVVQKTAA--RG-KVFACRIQE--A-PQMITT  141 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~--p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~-~vi~~r~e~--~-~~~~~~  141 (168)
                      +.+.+|+|--+|.|  |+.++...  .+.....++-.|.+..-...-+.-..-.+.  .+ .+.++..-.  . .....+
T Consensus       220 ~~~~~I~DPacGsG--gfL~~a~~~~~~~~~~~~~G~e~~~~~~~la~~nl~l~g~~~~~~~i~~~d~l~~~~~~~~~~~  297 (542)
T 3lkd_A          220 KQGFTLYDATMGSG--SLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTN  297 (542)
T ss_dssp             CTTCEEEETTCTTS--TTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCC
T ss_pred             CCCCEEECCCCCCC--HHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCC
T ss_conf             78986832778845--5889888877500555787442667999999998787246542220320565444443232320


Q ss_pred             CCEEEE
Q ss_conf             869999
Q gi|254780807|r  142 CDVISA  147 (168)
Q Consensus       142 ~d~v~s  147 (168)
                      ||+|++
T Consensus       298 fD~Il~  303 (542)
T 3lkd_A          298 FDGVLM  303 (542)
T ss_dssp             BSEEEE
T ss_pred             EEEEEE
T ss_conf             003563


No 237
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=38.68  E-value=11  Score=17.76  Aligned_cols=49  Identities=18%  Similarity=0.232  Sum_probs=31.7

Q ss_pred             CCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHH--------HHHHHHHHHHHHCC
Q ss_conf             44311111467733565652275546634787500003--------89999999997389
Q gi|254780807|r   72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK--------KASFLRYVVQKTAA  123 (168)
Q Consensus        72 ~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~K--------K~~FL~~~~~~L~L  123 (168)
                      +++++=|  |||+-|+=+|.++..+. ..||++|+...        -...+.+..++.+.
T Consensus       180 pk~vvVv--GgG~ig~E~A~~l~~~G-~~Vtlie~~~~ll~~~d~e~~~~l~~~l~~~GV  236 (476)
T 3lad_A          180 PGKLGVI--GAGVIGLELGSVWARLG-AEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGL  236 (476)
T ss_dssp             CSEEEEE--CCSHHHHHHHHHHHHTT-CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTE
T ss_pred             CCCEEEE--CCCHHHHHHHHHHHHCC-CEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             9814997--88799999999999659-979999868855776677889999998875394


No 238
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A*
Probab=38.19  E-value=9  Score=18.25  Aligned_cols=38  Identities=13%  Similarity=0.246  Sum_probs=21.9

Q ss_pred             CCEE-EECHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf             8099-8042665331247986999914799899999848852
Q gi|254780807|r  124 RGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL  164 (168)
Q Consensus       124 ~~~v-i~~r~e~~~~~~~~~d~v~sRA~a~l~~ll~~~~pll  164 (168)
                      ...| .+..+.+... ..++|.|++=  +|++.+++++.+=|
T Consensus       234 ~i~V~lNtd~~~i~~-~~~~d~vIsT--~Pld~l~~~~~~~L  272 (397)
T 3hdq_A          234 NIKVMLNTDYREIAD-FIPFQHMIYT--GPVDAFFDFCYGKL  272 (397)
T ss_dssp             TEEEEESCCGGGTTT-TSCEEEEEEC--SCHHHHTTTTTCCC
T ss_pred             CCEEEECCEEHHHHH-HCCCCEEEEC--CCHHHHHHHHCCCC
T ss_conf             823674220021110-0245604762--88899997524677


No 239
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=38.13  E-value=11  Score=17.65  Aligned_cols=27  Identities=22%  Similarity=0.102  Sum_probs=13.6

Q ss_pred             HHHCCCCCEEEECCHHHHHHHHHHHHH
Q ss_conf             984632130430899999898646356
Q gi|254780807|r   37 LKWSKKINLVSSSTVEDFWIRHVEDSL   63 (168)
Q Consensus        37 ~~~N~~~NLts~~~~~~~~~rHi~DSl   63 (168)
                      ....+...-....+.++.+.+.+-+.+
T Consensus       117 ~~~~~~~~~~~~~~~~e~~~~~~G~~l  143 (367)
T 1i8t_A          117 NAQKKKYGDKVPENLEEQAISLVGEDL  143 (367)
T ss_dssp             HHHTTTTCCCCCCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCHHHHHHHCCCCHH
T ss_conf             998765067786347777541036322


No 240
>3bwc_A Spermidine synthase; SAM, SGPP, structural genomics, PSI, protein structure initiative; HET: MSE SAM; 2.30A {Trypanosoma cruzi strain cl brener} PDB: 3bwb_A*
Probab=36.37  E-value=23  Score=15.90  Aligned_cols=83  Identities=17%  Similarity=0.182  Sum_probs=52.5

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHC-CCCCCCCEEEEEHHHHHHHHHHHHHHH----HHCC-CCEEEECHHHH-HHHC-C
Q ss_conf             0123443111114677335656522-755466347875000038999999999----7389-80998042665-3312-4
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQ----KTAA-RGKVFACRIQE-APQM-I  139 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~-~p~~~~~~v~Lves~~KK~~FL~~~~~----~L~L-~~~vi~~r~e~-~~~~-~  139 (168)
                      ..+++++++=||.|+|.  ++-.+. +|..  .++++||-.+.-++..+.--.    .+.= +++++.+.+-+ +.+. .
T Consensus        92 ~h~~pk~VLIiGgGdG~--~~rellk~~~v--~~v~~VEID~~Vi~~~~~~~p~~~~~~~dprv~iii~D~~~~l~~~~~  167 (304)
T 3bwc_A           92 SHPKPERVLIIGGGDGG--VLREVLRHGTV--EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPD  167 (304)
T ss_dssp             TSSSCCEEEEEECTTSH--HHHHHHTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCT
T ss_pred             CCCCCCEEEEECCCCHH--HHHHHHHCCCC--CEEEEEECCHHHHHHHHHHCHHHHCCCCCCCEEEEECHHHHHHHHCCC
T ss_conf             39997869998389379--99999965994--279998058899999998654430111498648998669999974634


Q ss_pred             CCCCEEEECCCCCHH
Q ss_conf             798699991479989
Q gi|254780807|r  140 TTCDVISARALADLD  154 (168)
Q Consensus       140 ~~~d~v~sRA~a~l~  154 (168)
                      .+||+|+.=+..|..
T Consensus       168 ~~yDvIi~D~~dp~~  182 (304)
T 3bwc_A          168 NTYDVVIIDTTDPAG  182 (304)
T ss_dssp             TCEEEEEEECC----
T ss_pred             CCCCEEEEECCCCCC
T ss_conf             687689990899887


No 241
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=33.28  E-value=12  Score=17.44  Aligned_cols=72  Identities=11%  Similarity=0.099  Sum_probs=40.2

Q ss_pred             HHCCCCCCCCEEECCCCC-HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHH--------
Q ss_conf             100123443111114677-335656522755466347875000038999999999738980-9980426653--------
Q gi|254780807|r   66 FQLHPYPSIWIDLGSGGG-FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA--------  135 (168)
Q Consensus        66 ~~~~~~~~~ilDiGSGaG-fPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~--------  135 (168)
                      +.+++.+.+++|+|++.| +-=.......+.   ..+..+|-...+           .+++ ..+.+.+.+.        
T Consensus        17 ~~l~~~~~~vlDLg~aPGgw~q~~~~~~~~~---~~v~~vd~~~~~-----------~i~~~~~~~gd~~~~~~~~~~~~   82 (180)
T 1ej0_A           17 DKLFKPGMTVVDLGAAPGGWSQYVVTQIGGK---GRIIACDLLPMD-----------PIVGVDFLQGDFRDELVMKALLE   82 (180)
T ss_dssp             HCCCCTTCEEEEESCTTCHHHHHHHHHHCTT---CEEEEEESSCCC-----------CCTTEEEEESCTTSHHHHHHHHH
T ss_pred             HCCCCCCCEEEEEECCCCCCEEEEEEECCCC---CEEEEEECCCCC-----------CCCCCEEECCCCHHHHHHHHHHH
T ss_conf             4866789869997325896428988752898---408997456465-----------56896785155002345665543


Q ss_pred             HHCCCCCCEEEECCCC
Q ss_conf             3124798699991479
Q gi|254780807|r  136 PQMITTCDVISARALA  151 (168)
Q Consensus       136 ~~~~~~~d~v~sRA~a  151 (168)
                      .....++|+|+|=+-.
T Consensus        83 ~~~~~~~DlVlSD~ap   98 (180)
T 1ej0_A           83 RVGDSKVQVVMSDMAP   98 (180)
T ss_dssp             HHTTCCEEEEEECCCC
T ss_pred             HCCCCCCCEEECCCCC
T ss_conf             2246542488523577


No 242
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=32.74  E-value=13  Score=17.31  Aligned_cols=17  Identities=24%  Similarity=0.200  Sum_probs=13.2

Q ss_pred             HCCCCCCCCEEECCCCC
Q ss_conf             00123443111114677
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGG   83 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaG   83 (168)
                      .+++.+.+++|+|++.|
T Consensus        18 ~l~~~~~~vlDLg~aPG   34 (196)
T 2nyu_A           18 QILRPGLRVLDCGAAPG   34 (196)
T ss_dssp             CCCCTTCEEEEETCCSC
T ss_pred             CCCCCCCEEEEECCCCC
T ss_conf             86579987999657897


No 243
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* 3evg_A*
Probab=31.59  E-value=13  Score=17.32  Aligned_cols=91  Identities=14%  Similarity=0.082  Sum_probs=39.8

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHH----HHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCC
Q ss_conf             012344311111467733565652275546634787500----0038999999999738980998042665331247986
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES----KNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD  143 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves----~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d  143 (168)
                      +++...+++|+|+|.|==.-..| ..+..  ..|..++-    ..+..     ....++-+.........-......++|
T Consensus        79 ~ikp~g~VVDLGcAPGGWSQvaa-~~~~v--~~V~G~~iG~dl~e~P~-----~~~~~g~niv~~~~~~dv~~l~~~~~D  150 (305)
T 2p41_A           79 LVTPEGKVVDLGCGRGGWSYYCG-GLKNV--REVKGLTKGGPGHEEPI-----PMSTYGWNLVRLQSGVDVFFIPPERCD  150 (305)
T ss_dssp             SSCCCEEEEEETCTTSHHHHHHH-TSTTE--EEEEEECCCSTTSCCCC-----CCCSTTGGGEEEECSCCTTTSCCCCCS
T ss_pred             CCCCCCEEEECCCCCCCHHHHHH-HHCCC--CCEEEEEECCCCCCCCC-----CCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf             75769868873768983899998-62266--62168994465565873-----441036553013444467753788788


Q ss_pred             EEEECCCC----------CHHHHHHHHHHHHCC
Q ss_conf             99991479----------989999984885206
Q gi|254780807|r  144 VISARALA----------DLDTLLEYSFPWLYQ  166 (168)
Q Consensus       144 ~v~sRA~a----------~l~~ll~~~~pllk~  166 (168)
                      +|+|-..-          -.-.+++++.++|++
T Consensus       151 ~VlcDm~esS~~~~vd~~Rtl~VLelae~wL~p  183 (305)
T 2p41_A          151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSN  183 (305)
T ss_dssp             EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCT
T ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             898448777899654543239999999998345


No 244
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=31.25  E-value=20  Score=16.23  Aligned_cols=93  Identities=20%  Similarity=0.281  Sum_probs=51.8

Q ss_pred             HHHHCCCCCCCCEEECCCCC-HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC--CCEEEE-CHHHHH--HH
Q ss_conf             43100123443111114677-3356565227554663478750000389999999997389--809980-426653--31
Q gi|254780807|r   64 RVFQLHPYPSIWIDLGSGGG-FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFA-CRIQEA--PQ  137 (168)
Q Consensus        64 ~~~~~~~~~~~ilDiGSGaG-fPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L--~~~vi~-~r~e~~--~~  137 (168)
                      .-+.+...+..++|+|+..| |--..|.     ....+|+.||--..-   |   ..+|.-  .+.+.. .++-++  ..
T Consensus        30 ~~f~i~~~gk~~lDiGaStGGFTd~lLq-----~GA~~V~aVDVG~~q---L---~~~lr~d~rV~~~E~~n~R~~~~~~   98 (232)
T 3opn_A           30 KEFHLEINGKTCLDIGSSTGGFTDVMLQ-----NGAKLVYALDVGTNQ---L---AWKIRSDERVVVMEQFNFRNAVLAD   98 (232)
T ss_dssp             HHTTCCCTTCEEEEETCTTSHHHHHHHH-----TTCSEEEEECSSCCC---C---CHHHHTCTTEEEECSCCGGGCCGGG
T ss_pred             HHCCCCCCCCEEEECCCCCCHHHHHHHH-----CCCCEEEEEECCCHH---H---HHHHHCCCCCCCHHHHCCCCCCHHH
T ss_conf             9779986899899858898589999998-----098789999437034---3---0777439870320210144553333


Q ss_pred             C-CCCCCEEEE-CCCCCHHHHHHHHHHHHCCC
Q ss_conf             2-479869999-14799899999848852067
Q gi|254780807|r  138 M-ITTCDVISA-RALADLDTLLEYSFPWLYQK  167 (168)
Q Consensus       138 ~-~~~~d~v~s-RA~a~l~~ll~~~~pllk~k  167 (168)
                      . .+++|++++ =.|-++..++.-..+++++.
T Consensus        99 ~~~~~~Dlvv~DvSFISl~~vlp~~~~~l~~~  130 (232)
T 3opn_A           99 FEQGRPSFTSIDVSFISLDLILPPLYEILEKN  130 (232)
T ss_dssp             CCSCCCSEEEECCSSSCGGGTHHHHHHHSCTT
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf             04688878997065176999999999982689


No 245
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=29.79  E-value=30  Score=15.26  Aligned_cols=63  Identities=24%  Similarity=0.436  Sum_probs=31.1

Q ss_pred             HHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE-------CCHHHHHHHHHHHHHHHHHCCC---CCCCCEEECCCCCHHH
Q ss_conf             41799989999999999999984632130430-------8999998986463564310012---3443111114677335
Q gi|254780807|r   17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSS-------STVEDFWIRHVEDSLRVFQLHP---YPSIWIDLGSGGGFPG   86 (168)
Q Consensus        17 ~~~~ls~eq~~~l~~y~~ll~~~N~~~NLts~-------~~~~~~~~rHi~DSl~~~~~~~---~~~~ilDiGSGaGfPG   86 (168)
                      ..++.+.++...+...   ...  ..++++|.       ....+.|.+.+-.+..++....   ..-.++|+|  ||||+
T Consensus       178 ~kFG~~~~~~~~~~~~---~~~--~~l~~~GlH~HiGS~~~d~~~~~~~i~~~~~~~~~~~~~g~~~~~ldiG--GGf~~  250 (471)
T 2oo0_A          178 VKFGATLRTSRLLLER---AKE--LNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIG--GGFPG  250 (471)
T ss_dssp             TTSCBCHHHHHHHHHH---HHH--TTCEEEEEEECCCBSCCCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECC--CCCCS
T ss_pred             CCCCCCHHHHHHHHHH---HHH--CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCC
T ss_conf             6766448999999998---875--5951899999758876772889999998778898887608653332247--77565


No 246
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, ATP-binding, capsid protein, cleavage on PAIR of basic residues; HET: GTA SAH; 1.45A {Yellow fever virus 17D} PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=28.53  E-value=16  Score=16.85  Aligned_cols=92  Identities=18%  Similarity=0.146  Sum_probs=38.8

Q ss_pred             CCCCCCCCEEECCCCCHHHHHHHHCCCCCC-CCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH-HCCCCCCEE
Q ss_conf             012344311111467733565652275546-634787500003899999999973898099804266533-124798699
Q gi|254780807|r   68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIE-GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP-QMITTCDVI  145 (168)
Q Consensus        68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~-~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~-~~~~~~d~v  145 (168)
                      ++..+.+|+|+|+|.|==.-..+=..+-.. ...+..+|-...-..     ...++-+....... +++. -...++|+|
T Consensus        71 ~lkp~~~VVDLGaAPGGWSQvaa~~~~v~~~~G~vigvDl~~~P~~-----~~t~~~di~~~~~~-~~v~~l~~~~~DlV  144 (277)
T 3evf_A           71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-----VQSLGWNIITFKDK-TDIHRLEPVKCDTL  144 (277)
T ss_dssp             SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-----CCBTTGGGEEEECS-CCTTTSCCCCCSEE
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCC-----CCEECCCCCCHHHH-HHHHHCCCCCCCEE
T ss_conf             8577987999267886899999985554677139994128768877-----74525565766689-99986478766878


Q ss_pred             EECCCCC-----------HHHHHHHHHHHHCC
Q ss_conf             9914799-----------89999984885206
Q gi|254780807|r  146 SARALAD-----------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       146 ~sRA~a~-----------l~~ll~~~~pllk~  166 (168)
                      +|-. +.           ....++++..+|++
T Consensus       145 lsDm-G~~~~d~~~~~~l~~~aL~la~~~L~~  175 (277)
T 3evf_A          145 LCDI-GESSSSSVTEGERTVRVLDTVEKWLAC  175 (277)
T ss_dssp             EECC-CCCCSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ECCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             7268-653202467778999999999998476


No 247
>2kyg_C Protein CBFA2T1; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=27.85  E-value=13  Score=17.36  Aligned_cols=10  Identities=40%  Similarity=0.903  Sum_probs=8.6

Q ss_pred             CEEECCCCCH
Q ss_conf             1111146773
Q gi|254780807|r   75 WIDLGSGGGF   84 (168)
Q Consensus        75 ilDiGSGaGf   84 (168)
                      +.|+|||.|+
T Consensus         2 ~~d~gs~tgy   11 (38)
T 2kyg_C            2 MADIGSASGY   11 (38)
T ss_dssp             CSCCSCCCSS
T ss_pred             CCCCCCCCCC
T ss_conf             1102476777


No 248
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, structural genomics; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=27.80  E-value=32  Score=15.05  Aligned_cols=74  Identities=14%  Similarity=0.066  Sum_probs=36.9

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCC------------CCCEEEEEHHHHHHHHHHHHHHHHHCCC---CEEEECHHHHH
Q ss_conf             34431111146773356565227554------------6634787500003899999999973898---09980426653
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSI------------EGGLVNLIESKNKKASFLRYVVQKTAAR---GKVFACRIQEA  135 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~------------~~~~v~Lves~~KK~~FL~~~~~~L~L~---~~vi~~r~e~~  135 (168)
                      .+.+|+|-.+|.|  |+.++++.--.            ....++.+|....-+..-+.-..-.+..   ..+.+...-+.
T Consensus       171 ~~~~IlDPacGsG--~fL~~~~~~~~~~~~~~~~~~~~~~~~i~G~e~~~~~~~la~~nl~l~~~~~~~~~i~~~d~~~~  248 (445)
T 2okc_A          171 MGETVCDPACGTG--GFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK  248 (445)
T ss_dssp             TTCCEEETTCTTC--HHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred             CCCEEECCCCCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHCEECEECCHHHHHHHHHHCCCCCCCCCCCEEECCCHHHH
T ss_conf             9997812788976--65999999998731227777553010142341209999999962310277643201221530320


Q ss_pred             HHCCCCCCEEEE
Q ss_conf             312479869999
Q gi|254780807|r  136 PQMITTCDVISA  147 (168)
Q Consensus       136 ~~~~~~~d~v~s  147 (168)
                       ....+||+|++
T Consensus       249 -~~~~~fD~Ii~  259 (445)
T 2okc_A          249 -EPSTLVDVILA  259 (445)
T ss_dssp             -CCSSCEEEEEE
T ss_pred             -CCCCCCCEEEC
T ss_conf             -24346872245


No 249
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=27.64  E-value=32  Score=15.04  Aligned_cols=71  Identities=13%  Similarity=0.071  Sum_probs=39.8

Q ss_pred             CCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEE-CHHHHHHHCCCCCCEEEECC
Q ss_conf             431111146773356565227554663478750000389999999997389809980-42665331247986999914
Q gi|254780807|r   73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDVISARA  149 (168)
Q Consensus        73 ~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~-~r~e~~~~~~~~~d~v~sRA  149 (168)
                      .+|+=+|+  |.=|=.++=..-......|+++|++..+...+.    ..+......+ ...+.+.....++|+|++=.
T Consensus         6 ~kI~ViGa--G~vG~~va~~L~~~~~~~v~~~dr~~~~~~~~~----~~~~~~~~~d~~d~~~l~~~l~~~DvVi~~~   77 (118)
T 3ic5_A            6 WNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMGVATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             EEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             CCEEEECC--CHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCC----CCCCCCCCCCCCCHHHHHHHHCCCCEEEECC
T ss_conf             78899867--999999999998789984786126566641000----1222211124489999999985998999837


No 250
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=27.57  E-value=32  Score=15.03  Aligned_cols=67  Identities=12%  Similarity=-0.009  Sum_probs=39.5

Q ss_pred             EEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHH
Q ss_conf             043089999989864635643100123443111114677335656522755466347875000038999999999
Q gi|254780807|r   45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ  119 (168)
Q Consensus        45 Lts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~  119 (168)
                      +++.+|.-.-    +..++.-......+.+++=+|+||.=-++..+...    ...++++.+...|..-|..-..
T Consensus       105 ~~G~NTD~~G----~~~~l~~~~~~~~~~~vlilG~GGaa~a~~~al~~----~~~i~i~nR~~~ka~~l~~~~~  171 (287)
T 1nvt_A          105 AIGYNTDGIG----ARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK----DNNIIIANRTVEKAEALAKEIA  171 (287)
T ss_dssp             EEEECCHHHH----HHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS----SSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECCCHH----HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHC----CCEEEEEECCHHHHHHHHHHHH
T ss_conf             8745410057----77777752256678759997624889999999960----8816998378999999999999


No 251
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransferase, viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=27.33  E-value=17  Score=16.65  Aligned_cols=13  Identities=38%  Similarity=0.647  Sum_probs=10.9

Q ss_pred             CCCCCEEECCCCC
Q ss_conf             3443111114677
Q gi|254780807|r   71 YPSIWIDLGSGGG   83 (168)
Q Consensus        71 ~~~~ilDiGSGaG   83 (168)
                      ...+|+|+|+|.|
T Consensus        81 p~g~VVDLG~aPG   93 (300)
T 3eld_A           81 ITGRVLDLGCGRG   93 (300)
T ss_dssp             CCEEEEEETCTTC
T ss_pred             CCCEEEEECCCCC
T ss_conf             5883898377896


No 252
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis ma-4680} PDB: 3go4_A*
Probab=26.92  E-value=18  Score=16.50  Aligned_cols=58  Identities=12%  Similarity=0.158  Sum_probs=33.7

Q ss_pred             CCCEEECCCCCHHHHHHHHC---CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHH
Q ss_conf             43111114677335656522---7554663478750000389999999997389-8099804266
Q gi|254780807|r   73 SIWIDLGSGGGFPGIITSIQ---LSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ  133 (168)
Q Consensus        73 ~~ilDiGSGaGfPGi~laI~---~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e  133 (168)
                      ..++|+|||-+-.|-+-.++   .|+.   +|+.+|...--...-+.......- ..+++.+.+.
T Consensus        80 rQfLDlGsGlPt~~n~heva~~~~P~a---rVvyvD~dp~vlaharalL~~~~~~~~~~v~aD~r  141 (277)
T 3giw_A           80 RQFLDIGTGIPTSPNLHEIAQSVAPES---RVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADML  141 (277)
T ss_dssp             CEEEEESCCSCCSSCHHHHHHHHCTTC---EEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTT
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCC
T ss_conf             789994638898874999998748997---69999497889999999733798773899957666


No 253
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=26.17  E-value=34  Score=14.88  Aligned_cols=73  Identities=12%  Similarity=0.183  Sum_probs=37.0

Q ss_pred             CCCEEECCCC-CH-HHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH-CCCCEEE--ECHHHHHHHCCCCCCEEEE
Q ss_conf             4311111467-73-3565652275546634787500003899999999973-8980998--0426653312479869999
Q gi|254780807|r   73 SIWIDLGSGG-GF-PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT-AARGKVF--ACRIQEAPQMITTCDVISA  147 (168)
Q Consensus        73 ~~ilDiGSGa-Gf-PGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L-~L~~~vi--~~r~e~~~~~~~~~d~v~s  147 (168)
                      -++.=||.|+ || |++.-.++..+.....+.|+|-...|..-......+. +....+.  ..+-|.+.    ..|+|+.
T Consensus         6 mKI~iIGaGsvg~t~~l~~~l~~~~~~~~ei~L~Did~~~~~~~~~~~~~~~~~~~~i~~t~d~~eal~----~aD~Vv~   81 (450)
T 3fef_A            6 IKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALS----AADIVII   81 (450)
T ss_dssp             EEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHT----TCSEEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHC----CCCEEEE
T ss_conf             779999978688899999999734466882999917776888899999861489961999778689848----9999998


Q ss_pred             CC
Q ss_conf             14
Q gi|254780807|r  148 RA  149 (168)
Q Consensus       148 RA  149 (168)
                      -|
T Consensus        82 t~   83 (450)
T 3fef_A           82 SI   83 (450)
T ss_dssp             CC
T ss_pred             CE
T ss_conf             74


No 254
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=24.99  E-value=20  Score=16.25  Aligned_cols=15  Identities=40%  Similarity=0.445  Sum_probs=11.6

Q ss_pred             CCCCCCCEEECCCCC
Q ss_conf             123443111114677
Q gi|254780807|r   69 HPYPSIWIDLGSGGG   83 (168)
Q Consensus        69 ~~~~~~ilDiGSGaG   83 (168)
                      +.....|+|+|+|.|
T Consensus        92 l~p~G~VVDLGcapG  106 (321)
T 3lkz_A           92 LEPVGKVIDLGCGRG  106 (321)
T ss_dssp             CCCCEEEEEETCTTC
T ss_pred             CCCCCEEEECCCCCC
T ss_conf             550886887476887


No 255
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum 3D7}
Probab=24.86  E-value=20  Score=16.23  Aligned_cols=17  Identities=24%  Similarity=0.300  Sum_probs=13.2

Q ss_pred             HCCCCCCCCEEECCCCC
Q ss_conf             00123443111114677
Q gi|254780807|r   67 QLHPYPSIWIDLGSGGG   83 (168)
Q Consensus        67 ~~~~~~~~ilDiGSGaG   83 (168)
                      ++++.+..++|+|++.|
T Consensus        18 ~l~~~~~~vvDLg~aPG   34 (201)
T 2plw_A           18 LFLKKNKIILDIGCYPG   34 (201)
T ss_dssp             CCCCTTEEEEEESCTTC
T ss_pred             CCCCCCCEEEEECCCCC
T ss_conf             82579987999478997


No 256
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=23.45  E-value=22  Score=15.98  Aligned_cols=92  Identities=14%  Similarity=0.072  Sum_probs=42.7

Q ss_pred             CCCCCCEEECCCCCHHHHHH-HHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEEC
Q ss_conf             23443111114677335656-52275546634787500003899999999973898099804266533124798699991
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIIT-SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR  148 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~l-aI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sR  148 (168)
                      ....+++|+|+|.|  |--- +...+  ....|+.+|--.-.- .-........-+....+.+........++.|+|+|-
T Consensus        81 ~~~g~VVDLGas~G--GwTqva~~~~--ga~~V~avDvG~~~~-~~p~~~~~~~~n~~~~~~~~dv~~~~~~~~D~vvcD  155 (276)
T 2wa2_A           81 ELKGTVVDLGCGRG--SWSYYAASQP--NVREVKAYTLGTSGH-EKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCD  155 (276)
T ss_dssp             CCCEEEEEESCTTC--HHHHHHHTST--TEEEEEEECCCCTTS-CCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEEC
T ss_pred             CCCCEEEECCCCCC--CHHHHHHHHC--CCCEEEEEECCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             76884898077887--0999998764--885799998278765-575333200356121003332211289988889980


Q ss_pred             C-CCCH---------HHHHHHHHHHHCC
Q ss_conf             4-7998---------9999984885206
Q gi|254780807|r  149 A-LADL---------DTLLEYSFPWLYQ  166 (168)
Q Consensus       149 A-~a~l---------~~ll~~~~pllk~  166 (168)
                      . +.+.         -.+++++.|+++.
T Consensus       156 is~~S~~~~v~~~r~l~Vl~l~~~~l~~  183 (276)
T 2wa2_A          156 IGESNPTAAVEASRTLTVLNVISRWLEY  183 (276)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHCCCHHHHHHHHHHHHHH
T ss_conf             5445786002003323299999999956


No 257
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=23.37  E-value=23  Score=15.84  Aligned_cols=16  Identities=25%  Similarity=0.488  Sum_probs=7.8

Q ss_pred             CCCEEEECCCCCHHHHHH
Q ss_conf             986999914799899999
Q gi|254780807|r  141 TCDVISARALADLDTLLE  158 (168)
Q Consensus       141 ~~d~v~sRA~a~l~~ll~  158 (168)
                      .+|.|++=  .|+..+++
T Consensus       246 ~~d~vI~a--~p~~~~~~  261 (424)
T 2b9w_A          246 ESDVLVLT--VPLEKFLD  261 (424)
T ss_dssp             EESEEEEC--SCHHHHTT
T ss_pred             EECEEEEE--CCHHHHHH
T ss_conf             92689990--78799975


No 258
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=23.09  E-value=23  Score=15.89  Aligned_cols=88  Identities=16%  Similarity=0.120  Sum_probs=37.6

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHH----HHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCE
Q ss_conf             123443111114677335656522755466347875000----0389999999997389809980426653312479869
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK----NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV  144 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~----~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~  144 (168)
                      +....+++|+|+|.|==.-..+ ..+..  ..|..++--    .+-.     .....+-+......+.+-..-...+.|+
T Consensus        72 ~~~~g~vvDlg~~~Ggws~~~~-~~~~v--~~V~G~tlG~dghe~P~-----~~~~~g~nii~~~~~~Dv~~~~~~~~Dt  143 (265)
T 2oxt_A           72 VELTGRVVDLGCGRGGWSYYAA-SRPHV--MDVRAYTLGVGGHEVPR-----ITESYGWNIVKFKSRVDIHTLPVERTDV  143 (265)
T ss_dssp             CCCCEEEEEESCTTSHHHHHHH-TSTTE--EEEEEECCCCSSCCCCC-----CCCBTTGGGEEEECSCCTTTSCCCCCSE
T ss_pred             CCCCCEEEEECCCCCCHHHHHH-HHCCC--CEEEEEEECCCCCCCCC-----CCCCCCCCEEEEECCCCEEECCCCCCCE
T ss_conf             6648828880678871899997-63376--54677894577666773-----2234786547444267327559986888


Q ss_pred             EEECCCCC-----------HHHHHHHHHHHHC
Q ss_conf             99914799-----------8999998488520
Q gi|254780807|r  145 ISARALAD-----------LDTLLEYSFPWLY  165 (168)
Q Consensus       145 v~sRA~a~-----------l~~ll~~~~pllk  165 (168)
                      |+|=. ++           .-.++++...++.
T Consensus       144 vlcDi-gess~~~~ve~~Rtl~Vlel~~~wl~  174 (265)
T 2oxt_A          144 IMCDV-GESSPKWSVESERTIKILELLEKWKV  174 (265)
T ss_dssp             EEECC-CCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEECC-CCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             99678-77899743221034799999999982


No 259
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=22.95  E-value=27  Score=15.45  Aligned_cols=32  Identities=22%  Similarity=0.318  Sum_probs=16.5

Q ss_pred             CEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHH
Q ss_conf             1111146773356565227554663478750000
Q gi|254780807|r   75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN  108 (168)
Q Consensus        75 ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~  108 (168)
                      ++=||+  |.=|+..|+..-...+.+|+++|++.
T Consensus        42 VvVIGa--GpAGL~aA~~La~~aG~~V~VlE~~~   73 (284)
T 1rp0_A           42 VVVVGA--GSAGLSAAYEISKNPNVQVAIIEQSV   73 (284)
T ss_dssp             EEEECC--SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             EEEECC--CHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             899897--78999999999874897599982578


No 260
>3gmb_A 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase; flavin monooxygenase, oxidoreductase; HET: FAD; 2.10A {Mesorhizobium loti} PDB: 3gmc_A*
Probab=22.94  E-value=27  Score=15.51  Aligned_cols=35  Identities=31%  Similarity=0.351  Sum_probs=25.3

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHH
Q ss_conf             34431111146773356565227554663478750000
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN  108 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~  108 (168)
                      .+.+|+=|  |||.=|+.+|+..... +..|+++|+..
T Consensus        46 ~~~~V~IV--GaGpaGl~~A~~Lar~-G~~V~VlEr~~   80 (415)
T 3gmb_A           46 KTRRAEVA--GGGFAGLTAAIALKQN-GWDVRLHEKSS   80 (415)
T ss_dssp             -CCEEEEE--CCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred             CCCEEEEE--CCCHHHHHHHHHHHHC-CCCEEEECCCC
T ss_conf             98989998--9678999999999968-99999993799


No 261
>2zzc_A Thioredoxin reductase 1, cytoplasmic; rossmann fold, alternative splicing, electron transport, FAD, flavoprotein, NADP, nucleus, oxidoreductase; HET: FAD NAP; 2.60A {Homo sapiens} PDB: 2zzb_A* 2zz0_A* 2j3n_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=22.38  E-value=41  Score=14.45  Aligned_cols=48  Identities=19%  Similarity=0.176  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHH
Q ss_conf             864635643100123443111114677335656522755466347875000
Q gi|254780807|r   57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK  107 (168)
Q Consensus        57 rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~  107 (168)
                      +.++.|-.++.+...+++++-|  |||+-|+-+|-++..+ +..||++++.
T Consensus       189 ~~~~~s~~~~~l~~~p~~vvII--GgG~ig~E~A~~l~~l-G~~Vtii~r~  236 (513)
T 2zzc_A          189 EYCISSDDLFSLPYCPGKTLVV--GASYVALECAGFLAGI-GLDVTVMVRS  236 (513)
T ss_dssp             HHCBCHHHHTTCSSCCCSEEEE--CCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred             CCCCCCHHHHCCCCCCCEEEEE--CCCHHHHHHHHHHHHH-CCEEEEEECC
T ss_conf             6651585353713279879998--9889999999999972-9869999827


No 262
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=22.23  E-value=27  Score=15.44  Aligned_cols=17  Identities=12%  Similarity=0.216  Sum_probs=8.3

Q ss_pred             CCCEEEECCCCCHHHHHHH
Q ss_conf             9869999147998999998
Q gi|254780807|r  141 TCDVISARALADLDTLLEY  159 (168)
Q Consensus       141 ~~d~v~sRA~a~l~~ll~~  159 (168)
                      .+|.|++=+  ++..+.++
T Consensus       231 ~ad~VI~a~--~~~~~~~L  247 (421)
T 3nrn_A          231 SFDVAISNV--GVRETVKL  247 (421)
T ss_dssp             ECSEEEECS--CHHHHHHH
T ss_pred             ECCEEEECC--CHHHHHHH
T ss_conf             989999979--99999986


No 263
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme structure, ATP-binding, nucleotide-binding; HET: SAM; 1.70A {Yokose virus}
Probab=22.01  E-value=25  Score=15.71  Aligned_cols=89  Identities=16%  Similarity=0.094  Sum_probs=45.1

Q ss_pred             CCCCCCCEEECCCCCHHHHHH-HHCCCCCCCCEEEEEHHHHH----HHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCC
Q ss_conf             123443111114677335656-52275546634787500003----8999999999738980998042665331247986
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIIT-SIQLSSIEGGLVNLIESKNK----KASFLRYVVQKTAARGKVFACRIQEAPQMITTCD  143 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~l-aI~~p~~~~~~v~Lves~~K----K~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d  143 (168)
                      ++...+++|+|++.|  |--- |...+  ....|..+|--..    ...+     ...+-+...+..+........+++|
T Consensus        88 l~p~g~VVDLGaapG--GWSqva~~~~--g~~~V~gvDvG~~~~~~p~~~-----~~~~~n~v~~~~~~dv~~~~~~~~D  158 (282)
T 3gcz_A           88 VKPTGIVVDLGCGRG--GWSYYAASLK--NVKKVMAFTLGVQGHEKPIMR-----TTLGWNLIRFKDKTDVFNMEVIPGD  158 (282)
T ss_dssp             CCCCEEEEEETCTTC--HHHHHHHTST--TEEEEEEECCCCTTSCCCCCC-----CBTTGGGEEEECSCCGGGSCCCCCS
T ss_pred             CCCCCEEEECCCCCC--CHHHHHHHHC--CCCEEEEEEECCCCCCCCCCC-----CCCCCCCEEEEECHHHHHCCCCCCC
T ss_conf             575883887377898--4899998753--886799998178766776102-----1147761565420002323887689


Q ss_pred             EEEECC-CCC---------HHHHHHHHHHHHCC
Q ss_conf             999914-799---------89999984885206
Q gi|254780807|r  144 VISARA-LAD---------LDTLLEYSFPWLYQ  166 (168)
Q Consensus       144 ~v~sRA-~a~---------l~~ll~~~~pllk~  166 (168)
                      +|+|-. +++         .-.+++++.++++.
T Consensus       159 ~VlcDia~sS~~~~Vd~~Rtl~Vl~l~~~~L~~  191 (282)
T 3gcz_A          159 TLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQE  191 (282)
T ss_dssp             EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             899578777888541201278999999999846


No 264
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, antibiotic biosynthesis, NADPH; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=21.40  E-value=43  Score=14.33  Aligned_cols=44  Identities=11%  Similarity=0.052  Sum_probs=25.3

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
Q ss_conf             234431111146773356565227554663478750000389999999997389
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA  123 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L  123 (168)
                      ++.++|+=++|-+|+-|.|-.-.|          .=++.=-..|.+....++.-
T Consensus       132 ~~~G~IInisS~~~~~~~~~~~~Y----------~asKaal~~lt~~la~El~~  175 (247)
T 2jah_A          132 RSKGTVVQMSSIAGRVNVRNAAVY----------QATKFGVNAFSETLRQEVTE  175 (247)
T ss_dssp             HHTCEEEEECCGGGTCCCTTCHHH----------HHHHHHHHHHHHHHHHHHGG
T ss_pred             HCCCEEEEECCHHHCCCCCCCHHH----------HHHHHHHHHHHHHHHHHHCH
T ss_conf             869879998225645789997689----------99999999999999998450


No 265
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase; 2.09A {Bartonella henselae str} PDB: 3enn_A 3emk_A
Probab=21.31  E-value=43  Score=14.32  Aligned_cols=44  Identities=20%  Similarity=0.131  Sum_probs=22.5

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC
Q ss_conf             344311111467733565652275546634787500003899999999973898
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR  124 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~  124 (168)
                      ..++|+=++|.+|.=|.|-...|          .=++.==..|.+....++.-.
T Consensus       151 ~~G~IInisS~~~~~~~~~~~~Y----------~asKaal~~ltk~lA~ela~~  194 (266)
T 3grp_A          151 RYGRIINITSIVGVVGNPGQTNY----------CAAKAGLIGFSKALAQEIASR  194 (266)
T ss_dssp             TCEEEEEECCC-------CHHHH----------HHHHHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEECCHHHCCCCCCCHHH----------HHHHHHHHHHHHHHHHHHCCC
T ss_conf             99289998776654789997799----------999999999999999996624


No 266
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3o8q_B*
Probab=21.07  E-value=43  Score=14.29  Aligned_cols=70  Identities=16%  Similarity=0.175  Sum_probs=45.8

Q ss_pred             EEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHH
Q ss_conf             0430899999898646356431001234431111146773356565227554663478750000389999999997
Q gi|254780807|r   45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK  120 (168)
Q Consensus        45 Lts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~  120 (168)
                      ++|.+|.-.-    +.+++.-......+.+++=+|+||.--++..++..-.  ...++++.++..|...+......
T Consensus       103 l~G~NTD~~G----~~~~l~~~~~~~~~~~vlilGaGGaa~ai~~al~~~g--~~~i~v~~r~~~ka~~l~~~~~~  172 (281)
T 3o8q_A          103 ILGDNTDGEG----LVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQ--PASITVTNRTFAKAEQLAELVAA  172 (281)
T ss_dssp             EEEECCHHHH----HHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTC--CSEEEEEESSHHHHHHHHHHHGG
T ss_pred             EEEEECCHHH----HHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCC--CCEEECCCCCHHHHHHHHHHHHH
T ss_conf             9999557166----5403000255766666999654365899999998648--86422116889999999999875


No 267
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.27  E-value=45  Score=14.19  Aligned_cols=35  Identities=20%  Similarity=0.186  Sum_probs=25.4

Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHH---HHHHHHHHHH
Q ss_conf             17999899999999999999846321304308999---9989864635
Q gi|254780807|r   18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---DFWIRHVEDS   62 (168)
Q Consensus        18 ~~~ls~eq~~~l~~y~~ll~~~N~~~NLts~~~~~---~~~~rHi~DS   62 (168)
                      .=+++.+|.+|+..|-+          |||+.+.+   ++..+|=+|-
T Consensus        11 e~dl~~eqteKllqFQd----------iTGied~~~Cr~iL~~H~Wdl   48 (67)
T 2dam_A           11 ERDLTQEQTEKLLQFQD----------LTGIESMDQCRHTLEQHNWNI   48 (67)
T ss_dssp             CCCCCHHHHHHHHHHHH----------HHCCSCHHHHHHHHHHHTSCH
T ss_pred             CCCCCHHHHHHHHHHHH----------HHCCCCHHHHHHHHHHCCCCH
T ss_conf             44224999999999987----------107675999999999918859


No 268
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=20.10  E-value=31  Score=15.11  Aligned_cols=10  Identities=10%  Similarity=0.275  Sum_probs=6.4

Q ss_pred             CCCCEEEECC
Q ss_conf             7986999914
Q gi|254780807|r  140 TTCDVISARA  149 (168)
Q Consensus       140 ~~~d~v~sRA  149 (168)
                      ..+|.|++-+
T Consensus       239 ~~ad~VI~~~  248 (425)
T 3ka7_A          239 HDADLVISNL  248 (425)
T ss_dssp             EECSEEEECS
T ss_pred             EECCEEEECC
T ss_conf             5589999896


Done!