BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780807|ref|YP_003065220.1| glucose-inhibited division
protein B [Candidatus Liberibacter asiaticus str. psy62]
(168 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780807|ref|YP_003065220.1| glucose-inhibited division protein B [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040484|gb|ACT57280.1| glucose-inhibited division protein B [Candidatus Liberibacter
asiaticus str. psy62]
Length = 168
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE
Sbjct: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK
Sbjct: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK
Sbjct: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
>gi|313901364|ref|ZP_07834850.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
gi|312953852|gb|EFR35534.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
Length = 236
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 6 SNSILRANYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
++I + L + E + + ++W++KINL + + ++ + +H
Sbjct: 1 MSNIFHKEDFSKVLAKHGMILQEHQLRQFEEYASMLIEWNQKINLTAITDPDEIYEKHFL 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DS+ + D+G+G GFPGI I +E + ++E+ K+ +FL + K
Sbjct: 61 DSILPSFDMSIQGSFCDVGAGAGFPGIPLKIIYPELE---LTIVETLGKRITFLNALCDK 117
Query: 121 TAAR-GKVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R + + D++SARA+A+L L E P + ++
Sbjct: 118 LQLKGVTCVHERAEVYAKDHRESFDIVSARAVANLPLLSELCIPLVKKQ 166
>gi|172059047|ref|YP_001815507.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
gi|229558761|sp|B1YGA6|RSMG_EXIS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171991568|gb|ACB62490.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
Length = 238
Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
VS L++ +Y L ++W++K+NL + + E +++H D + +
Sbjct: 14 GLEVSDHQLQQFRKYYELLVEWNEKMNLTAITDEEGVYLKHFYDSITAAFYFDFTKVETV 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
D+G+G GFP + I ++ V +I+S NK+ FL + + G F E
Sbjct: 74 CDVGAGAGFPSLPIKIMFPHLK---VTIIDSLNKRIGFLNMLATELGLEGVAFHHGRAEE 130
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
Q DV++ARA+A + L EY P
Sbjct: 131 FGKNKQFREHFDVVTARAVARMSVLAEYCLPLAR 164
>gi|260431966|ref|ZP_05785937.1| 16S rRNA methyltransferase GidB [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415794|gb|EEX09053.1| 16S rRNA methyltransferase GidB [Silicibacter lacuscaerulensis
ITI-1157]
Length = 207
Score = 127 bits (318), Expect = 6e-28, Method: Composition-based stats.
Identities = 68/151 (45%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ NVSRETL++L + L KW++KINLVS ST+ + W RH+ DS++VFQ + W+
Sbjct: 10 DNLNVSRETLDRLRLYVDLLEKWNRKINLVSRSTLSEAWSRHILDSIQVFQQVDHFDRWV 69
Query: 77 DLGSGGGFPGIITSIQL-SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG++ ++ S L+ES +K++FLR V+++T A V + RI+
Sbjct: 70 DLGSGGGFPGLVCAVIATESWPDAQFTLVESDQRKSAFLRTVIRETGANCTVVSKRIEAV 129
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ DV+SARALADL TLL Y L Q
Sbjct: 130 DRLE--ADVLSARALADLPTLLSYCERHLRQ 158
>gi|150398395|ref|YP_001328862.1| 16S rRNA methyltransferase GidB [Sinorhizobium medicae WSM419]
gi|166224616|sp|A6UEE7|RSMG_SINMW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150029910|gb|ABR62027.1| methyltransferase GidB [Sinorhizobium medicae WSM419]
Length = 213
Score = 126 bits (317), Expect = 9e-28, Method: Composition-based stats.
Identities = 92/152 (60%), Positives = 115/152 (75%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
N LN VSRET+EKLE+F LF KW++ INLV+ ST++D W RH+ DS+++FQL P P
Sbjct: 6 NRALNGLRVSRETVEKLEHFASLFQKWARSINLVAPSTLDDLWRRHILDSIQLFQLSPAP 65
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+DLGSGGGFPG+IT+I LS E G V+L+ES NKKA+FLR +++TAARG V RI
Sbjct: 66 KTWVDLGSGGGFPGVITAICLSETESGWVHLVESNNKKAAFLRVALRETAARGTVHPIRI 125
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+EAP I TCD ISARAL+DL LLEY PW+
Sbjct: 126 EEAPAEIPTCDAISARALSDLSQLLEYCAPWM 157
>gi|16081152|ref|NP_391980.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312083|ref|ZP_03593930.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316408|ref|ZP_03598213.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321321|ref|ZP_03602615.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325604|ref|ZP_03606898.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. SMY]
gi|121190|sp|P25813|RSMG_BACSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|40027|emb|CAA44405.1| unnamed protein product [Bacillus subtilis]
gi|467384|dbj|BAA05230.1| unknown [Bacillus subtilis]
gi|2636647|emb|CAB16137.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. subtilis str. 168]
Length = 239
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + ++S LE+ E +Y + ++W++KINL S + ++ +++H D +
Sbjct: 1 MNIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP + I + V +++S NK+ +FL + +
Sbjct: 61 AAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQ 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F E + + D+++ARA+A L L E P + +
Sbjct: 118 LENTTFCHDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|56554498|pdb|1XDZ|A Chain A, Crystal Structure Of Gram_positive Bacillus Subtilis
Glucose Inhibited Division Protein B (Gidb), Structural
Genomics, Mcsg
Length = 240
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + ++S LE+ E +Y + ++W++KINL S + ++ +++H D +
Sbjct: 2 MNIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSIT 61
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP + I + V +++S NK+ +FL + +
Sbjct: 62 AAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQ 118
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F E + + D+++ARA+A L L E P + +
Sbjct: 119 LENTTFCHDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 166
>gi|296330030|ref|ZP_06872514.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676754|ref|YP_003868426.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153069|gb|EFG93934.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414998|gb|ADM40117.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 239
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N ++ +S LE+ E +Y + ++W++KINL S + ++ +++H D +
Sbjct: 1 MNIEEFTSSLAEKGITLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP + I + V +++S NK+ +FL + +
Sbjct: 61 AAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQ 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F E + + D+++ARA+A L L E P + +
Sbjct: 118 LENTTFCHDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|321313661|ref|YP_004205948.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
gi|320019935|gb|ADV94921.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
Length = 239
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + ++S LE+ E +Y + ++W++KINL S + ++ +++H D +
Sbjct: 1 MNIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP + I + V +++S NK+ +FL + +
Sbjct: 61 AAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHLN---VTIVDSLNKRITFLEKLSEALQ 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F E + + D+++ARA+A L L E P + +
Sbjct: 118 LENTTFCHDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|291486739|dbj|BAI87814.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
natto BEST195]
Length = 239
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + ++S LE+ E +Y + ++W++KINL S + ++ +++H D +
Sbjct: 1 MNIEEFTSGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP + I + V +++S NK+ +FL + +
Sbjct: 61 AAFYVDFNQVNTICDVGAGAGFPSLPIKICFPHLN---VTIVDSLNKRITFLEKLSEALQ 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E + + D+++ARA+A L L E P + +
Sbjct: 118 LENTTYCHDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|70727673|ref|YP_254589.1| 16S rRNA methyltransferase GidB [Staphylococcus haemolyticus
JCSC1435]
gi|82592865|sp|Q4L2Z4|RSMG_STAHJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68448399|dbj|BAE05983.1| glucose inhibited division protein B [Staphylococcus haemolyticus
JCSC1435]
Length = 240
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 6 SNSI--LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N I L + +S + E+ + +Y L ++W++K+NL S + + +++H DS+
Sbjct: 1 MNGIEWLAKELSEHGIELSDKQKEQFQTYYRLLVEWNEKMNLTSITDEHEVYLKHFYDSI 60
Query: 64 RVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + D+G+G GFP I + ++ V +++S NK+ FL ++ +
Sbjct: 61 TPSFYYDFNQPLTICDVGAGAGFPSIPLKVVYPELK---VTIVDSLNKRIQFLNHLAAEL 117
Query: 122 AA-RGKVFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + + T DV++ARA+A L L E P + +
Sbjct: 118 GLTQVSFVHDRAETFGKGVNRETYDVVTARAVARLTVLSELCLPLVKK 165
>gi|240851401|ref|YP_002972804.1| glucose inhibited division protein B [Bartonella grahamii as4aup]
gi|240268524|gb|ACS52112.1| glucose inhibited division protein B [Bartonella grahamii as4aup]
Length = 215
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 66/147 (44%), Positives = 95/147 (64%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET+E L F L L+W+ INL+S++T+ D W RH+ DS ++F L+ + W DLGS
Sbjct: 19 VSRETMENLIQFESLILQWNAHINLISATTIPDLWTRHILDSAQIFPLYAHSLHWCDLGS 78
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFP I+ +I L + G +NL+ES KK +FLR V+ + V+ RI++ Q I
Sbjct: 79 GGGFPAIVIAIFLKEKKVGHINLVESSGKKVAFLRTVIAQLNLPATVYHARIEDVYQKIP 138
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
D+I+AR LA L++LL+ FP L +K
Sbjct: 139 ASDIITARGLAPLNSLLQLIFPLLTEK 165
>gi|229917463|ref|YP_002886109.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
gi|259495495|sp|C4L001|RSMG_EXISA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229468892|gb|ACQ70664.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
Length = 238
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYL-LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L + +S L + + ++ + ++W++K+NL + + E+ +++H DSL
Sbjct: 1 MNESQFIEALRAEGFELSETQLSQFKRYFEMLVEWNEKMNLTAITDREEVYLKHFYDSLS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
D+G+G GFP + I + V +I+S NK+ +FL +
Sbjct: 61 AAFHFDFTKVETVCDVGAGAGFPSLPLKILFPHL---HVTIIDSLNKRITFLNELALALG 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
G F E + DV++ARA+A + L EY P
Sbjct: 118 LEGVAFHHGRAEEFGKNKKFREQFDVVTARAVARMTVLAEYCLPLAK 164
>gi|153854264|ref|ZP_01995563.1| hypothetical protein DORLON_01557 [Dorea longicatena DSM 13814]
gi|149753039|gb|EDM62970.1| hypothetical protein DORLON_01557 [Dorea longicatena DSM 13814]
Length = 237
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ IL+ + ++ E E+ + ++ L +W+K +NL + E+ +H DSL +
Sbjct: 1 MDQILKKSLEKIGIEITDEQKEQFDIYHKLLEEWNKVMNLTGITEYEEVVEKHYVDSLSI 60
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPG+ I ++ V L++S NK+ FL V+++
Sbjct: 61 VKVMNMNHVDTVIDVGTGAGFPGLPLKIAFPHLK---VTLLDSLNKRIKFLNTVIEELGL 117
Query: 124 -RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ +RA+A+L TL EY P++
Sbjct: 118 EDIHTIHGRAEDYAKDAAYREKYDLCVSRAVANLATLSEYCLPYVK 163
>gi|223043474|ref|ZP_03613520.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
gi|222443263|gb|EEE49362.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
Length = 239
Score = 124 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L N + +S E+ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 6 LSKNLSEHGIELSETQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFFDSITPSFYY 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFDGELCICDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAAELGLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAESYGKGAYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|309777476|ref|ZP_07672430.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
gi|308914716|gb|EFP60502.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
Length = 236
Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLLN-----TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
+ + L++ E + + ++W++K+NL + + +++ + +H
Sbjct: 1 MSKKFHKEDFFKVLAEHGIQLHERQLQQFEEYASMLIEWNQKMNLTAITDLDEIYEKHFL 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DS+ + D+G+G GFPGI I +E + ++E+ K+ +FL + +K
Sbjct: 61 DSILPSFDWKLQGSFCDVGAGAGFPGIPLKIIYPDLE---LTIVETLGKRITFLNALCEK 117
Query: 121 TAARGK--VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G V A A + + D++SARA+A+L L E P + Q
Sbjct: 118 LKLDGVACVHARAEDYAKEHRESFDIVSARAVANLPLLSELCIPLVKQ 165
>gi|253573865|ref|ZP_04851207.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846342|gb|EES74348.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
Length = 240
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSI 74
+ VS E L++ E +Y + W++K+NL + E +I+H DS+
Sbjct: 15 HGIEVSEEQLKQFERYYEELVSWNEKMNLTGITEREQVYIKHFYDSISLAFHVPMGEIES 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+GSG GFPGI I ++ + +++S NK+ FL++VV + ++ R +
Sbjct: 75 KADIGSGAGFPGIPLKICFPHLQ---LTIVDSLNKRIQFLQHVVNELGLNQVRLLHGRAE 131
Query: 134 E---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A + L E+ P++
Sbjct: 132 DLGRQEDLRDAFDLVTARAVARMAILNEFCLPFVKP 167
>gi|15967089|ref|NP_387442.1| glucose-inhibited division protein B [Sinorhizobium meliloti 1021]
gi|307302551|ref|ZP_07582308.1| methyltransferase GidB [Sinorhizobium meliloti BL225C]
gi|307316118|ref|ZP_07595562.1| methyltransferase GidB [Sinorhizobium meliloti AK83]
gi|20177892|sp|Q92KW3|RSMG_RHIME RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15076362|emb|CAC47915.1| Probable glucose inhibited division protein B [Sinorhizobium
meliloti 1021]
gi|306897958|gb|EFN28700.1| methyltransferase GidB [Sinorhizobium meliloti AK83]
gi|306903221|gb|EFN33811.1| methyltransferase GidB [Sinorhizobium meliloti BL225C]
Length = 213
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 89/149 (59%), Positives = 113/149 (75%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET++KLE+F LF KW++ INLV+ ST+ED W RH+ DSL+++QL P P W
Sbjct: 9 LNGLRVSRETVQKLEHFASLFQKWARSINLVAPSTLEDLWRRHILDSLQLYQLSPGPKTW 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I LS EGG V+L+ES NKKA+FLR +++T ARG V RI+ A
Sbjct: 69 VDLGSGGGFPGVITAICLSEAEGGWVHLVESNNKKAAFLRVALRETGARGSVHPIRIEAA 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P I +CD ISARALADL LL+Y PW+
Sbjct: 129 PAEIPSCDAISARALADLSQLLDYCAPWM 157
>gi|160914902|ref|ZP_02077116.1| hypothetical protein EUBDOL_00910 [Eubacterium dolichum DSM 3991]
gi|158433442|gb|EDP11731.1| hypothetical protein EUBDOL_00910 [Eubacterium dolichum DSM 3991]
Length = 236
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
+ ++ + ++ + + + ++W+KK+NL + + +++ + +H
Sbjct: 1 MTKQFYKQDFFDALGKQGIVLNDQQQQQFDEYAQMLVEWNKKMNLTAITEIDEIYEKHFL 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + D+G+G GFP I I ++ V ++E+ K+ +FL + +K
Sbjct: 61 DSLLPSFDMEINGSFCDVGAGAGFPSIPLKIVYPQLK---VTIVETLGKRITFLNALCEK 117
Query: 121 TAARGKV-FACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ V R ++ + + D++SARA+A+L L E P +
Sbjct: 118 LGLKDVVLVHARAEDYAKEHRESFDIVSARAVANLPMLSELCIPLVK 164
>gi|299820856|ref|ZP_07052745.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
gi|299817877|gb|EFI85112.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
Length = 238
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + L +S + L++ E ++ + ++W++K+NL + + E+ +++H DS+
Sbjct: 1 MNPETFKQSLLEKGIELSEKQLQQFEDYFHMLVEWNEKMNLTAITNKEEVYLKHFYDSIS 60
Query: 65 VFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP I I ++ +V+ ++ + + L + T
Sbjct: 61 AAFYVDFENQASLCDIGAGAGFPSIPIKICFPHLKISIVDSLQKRITFLNSLAEKLDLT- 119
Query: 123 ARGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ F R ++ + D ++ARA+A + L E P + +
Sbjct: 120 -DVQFFHSRAEDFGKNKDFRASYDYVTARAVARMSVLAELCLPLVRK 165
>gi|308175807|ref|YP_003922512.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|307608671|emb|CBI45042.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|328555783|gb|AEB26275.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens TA208]
gi|328914172|gb|AEB65768.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens LL3]
Length = 239
Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N ++ ++S LE+ E +Y + ++W++K+NL S + ++ +++H D +
Sbjct: 1 MNIEEFTSSLAEKGISLSDRQLEQFELYYQMLVEWNEKMNLTSITEKKEVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP + I + V +++S NK+ +FL +
Sbjct: 61 AAFYIDFEKVTTLCDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLENLADALQ 117
Query: 123 ARGKVF----ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F A + + + D+++ARA+A L L E P + +
Sbjct: 118 LEHTTFVHDRAETFGQRKDVRESFDLVTARAVARLSVLSELCLPLVKK 165
>gi|311070641|ref|YP_003975564.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
gi|310871158|gb|ADP34633.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
Length = 239
Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + ++S LE+ E +Y + ++W++KINL S + ++ +++H D +
Sbjct: 1 MNIEEFTSGLAEKGISLSSRQLEQFELYYEMLVEWNEKINLTSITEKKEVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP + I ++ V++++S NK+ +FL + +
Sbjct: 61 AAFYVDFKQVNTICDVGAGAGFPSLPIKICFPHLQ---VSIVDSLNKRITFLEKLAEALQ 117
Query: 123 ARGKVF----ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F A + + + D+++ARA+A L L E P + +
Sbjct: 118 LENTSFYHDRAETFGQRQDLRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|163869377|ref|YP_001610633.1| 16S rRNA methyltransferase GidB [Bartonella tribocorum CIP 105476]
gi|189039482|sp|A9IZX8|RSMG_BART1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161019080|emb|CAK02638.1| glucose inhibited division protein B [Bartonella tribocorum CIP
105476]
Length = 213
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 1/165 (0%)
Query: 4 CDSNSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
DS+ + LL+ +VSRET+E L F L L+W+ INL+S++T+ D W RH+ DS
Sbjct: 1 MDSSIEQKYKQLLDIVPSVSRETMENLIQFESLILQWNAHINLISAATIPDLWTRHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++F L + W DLGSGGGFP I+ +I L G +NL+ES KK +FLR V+ +
Sbjct: 61 AQIFPLCSHSLQWCDLGSGGGFPAIVIAIFLKEKRSGHINLVESNGKKVAFLRTVIAQLN 120
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V+ RI++ Q I D+I+AR LA L+ LL+ FP L +K
Sbjct: 121 LPATVYHARIEDIYQKIPISDIITARGLAPLNELLQLIFPLLTEK 165
>gi|222087927|ref|YP_002546465.1| glucose inhibited division protein B [Agrobacterium radiobacter
K84]
gi|254766871|sp|B9JEW2|RSMG_AGRRK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221725375|gb|ACM28531.1| glucose inhibited division protein B [Agrobacterium radiobacter
K84]
Length = 205
Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 87/153 (56%), Positives = 117/153 (76%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ STV+D W RH+ DS ++FQLHP P+ W
Sbjct: 3 LNGVRVSRETQGRLQHFAELFQKWAKTINLVAPSTVDDLWRRHIADSAQIFQLHPKPARW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPGIIT+I L+ + G V+L+ES KKA+FLR +++ ARG V A RI+EA
Sbjct: 63 VDLGSGGGFPGIITAILLAEQKDGHVDLVESNQKKAAFLRVCLRECEARGAVHAVRIEEA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P+++ CDVISARALA+LD LL+Y+ PW+ + +
Sbjct: 123 PKIVADCDVISARALAELDMLLDYAAPWVERNE 155
>gi|314934965|ref|ZP_07842324.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
gi|313652895|gb|EFS16658.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
Length = 239
Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S E+ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 6 LSKKLSEHGIELSETQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFYDSITPSFYY 65
Query: 70 PYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFDGELSICDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAAELGLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAESYGKGAYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|323141445|ref|ZP_08076335.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium sp. YIT
12067]
gi|322414101|gb|EFY04930.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium sp. YIT
12067]
Length = 239
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL + + LE+ +Y L ++ +K +NL + + E+ ++H+ DSL ++
Sbjct: 5 EILAEKGAEAGLSFTPLQLEQFSRYYELLVETNKVMNLTAITEPEEVAVKHMVDSLLAYE 64
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-- 125
D+G+G GFPG+ I ++ V LI+S K+ FL+ V+++ +G
Sbjct: 65 AEMAGKTLADVGTGAGFPGVPLKIYCPELK---VTLIDSLGKRLRFLQQVIEELGVKGIR 121
Query: 126 --KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ A + D ++ARA+A L L EY P +
Sbjct: 122 CEHLRAEDAGRDKKHREKYDYVTARAVARLSVLSEYCLPLAKK 164
>gi|209551500|ref|YP_002283417.1| 16S rRNA methyltransferase GidB [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|226797828|sp|B5ZV45|RSMG_RHILW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209537256|gb|ACI57191.1| methyltransferase GidB [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 205
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 88/153 (57%), Positives = 115/153 (75%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV+ ST++D W RH+ DS +VFQ+HP P IW
Sbjct: 3 LNGLRVSRETQERLQHFAALFQKWAKTINLVAPSTLDDLWNRHIADSSQVFQIHPKPVIW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V + RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNARGSVHSSRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
I C ISARALADLD LLEYS PW+ +K
Sbjct: 123 HAEIGECGAISARALADLDGLLEYSAPWMLGEK 155
>gi|304405896|ref|ZP_07387554.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
gi|304345139|gb|EFM10975.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
Length = 240
Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
++ E L++ E ++ + ++W++K+NL + E + +H DS+ +
Sbjct: 15 KGITLTAEQLDQFEAYFRILVEWNEKMNLTGITEREAVYEKHFYDSVALSFYVDMKNVRH 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+GSG GFP + I ++ + +++S NK+ SFL++VV + R +
Sbjct: 75 IADIGSGAGFPSLPIKICFPHLK---ITIVDSLNKRISFLQHVVNELGLSDVSCVHGRAE 131
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ P+ D+++ARA+A L+ L E+ P++ +
Sbjct: 132 DIARLPEHRDHYDLVTARAVAKLNVLNEFCLPFVRK 167
>gi|311032248|ref|ZP_07710338.1| 16S rRNA methyltransferase GidB [Bacillus sp. m3-13]
Length = 238
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 10 LRANYLL-----NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
+ + ++S + L + + +Y L ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNKEQFISLLEEKGISLSSQQLSQFDTYYKLLVEWNEKMNLTAITDEEEVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I +++ V +++S NK+ +FL+ + +
Sbjct: 61 ASFYVDLNQELSLCDVGAGAGFPSIPLKICFPNLK---VTIVDSLNKRITFLQNLANELG 117
Query: 123 A-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + D+++ARA+A L L E P + +
Sbjct: 118 LKNVHFVHDRAETFGKNADYREKFDLVTARAVARLSVLSELCLPLVKE 165
>gi|58039525|ref|YP_191489.1| glucose inhibited division protein B [Gluconobacter oxydans 621H]
gi|81557091|sp|Q5FS13|RSMG_GLUOX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|58001939|gb|AAW60833.1| Glucose inhibited division protein B [Gluconobacter oxydans 621H]
Length = 193
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET E+LE F L ++W+ KINLVS + W RH+EDSL++ +L P DLGS
Sbjct: 4 VSRETHERLERFADLLVQWNAKINLVSPRDIAQLWPRHIEDSLQLAELIPEGKTITDLGS 63
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGII +I G V LIES +K +FLR + AR V A RI+ A
Sbjct: 64 GGGFPGIILAIA----TGNPVTLIESDQRKCAFLREAGRICEARVTVIAKRIEAASPP-- 117
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D+I+ARALA L+ LLE++ P L +
Sbjct: 118 PADIITARALAPLNRLLEWARPLLKE 143
>gi|52082646|ref|YP_081437.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis ATCC 14580]
gi|52788045|ref|YP_093874.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis ATCC 14580]
gi|319648512|ref|ZP_08002728.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
gi|81608802|sp|Q65CN3|RSMG_BACLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52005857|gb|AAU25799.1| glucose-inhibited division protein [Bacillus licheniformis ATCC
14580]
gi|52350547|gb|AAU43181.1| GidB [Bacillus licheniformis ATCC 14580]
gi|317389591|gb|EFV70402.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
Length = 239
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N A ++S LE+ E +Y ++W++K+NL S + ++ +++H DS+
Sbjct: 1 MNIEQFTAGLEKKGISLSSFQLEQFETYYEWLVEWNEKMNLTSITEKKEVYLKHFYDSIA 60
Query: 65 VFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP + I + V +++S NK+ FL +
Sbjct: 61 ASFYVDFKKMNTLCDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRIHFLNQLSDALK 117
Query: 123 ARGKVF----ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F A + + DV++ARA+A L L E P + +
Sbjct: 118 LENTAFYHDRAETFGRSKDHRESYDVVTARAVARLSVLSELCLPLVKK 165
>gi|241206938|ref|YP_002978034.1| 16S rRNA methyltransferase GidB [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860828|gb|ACS58495.1| methyltransferase GidB [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 205
Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats.
Identities = 84/153 (54%), Positives = 114/153 (74%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV+ ST++D W RH+ DS +VFQ++P W
Sbjct: 3 LNGLRVSRETQERLQHFAVLFQKWAKAINLVAPSTLDDLWHRHIADSSQVFQINPQAISW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELKDGWVHLVESNHKKAAFLRTALRETNARGSVHILRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ CD ISARALADLD L+EYS PW+ K+
Sbjct: 123 YAGVGECDAISARALADLDGLIEYSAPWMLGKE 155
>gi|222152196|ref|YP_002561356.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
gi|254766896|sp|B9E8Z2|RSMG_MACCJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222121325|dbj|BAH18660.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
Length = 238
Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 6 SNSI-LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + + ++ E ++ +Y ++W++KINL + + E+ +++H DS+
Sbjct: 1 MNEMKFLQHLKEKGFELTDEQQKQFAIYYETLVEWNEKINLTAVTEKEEVYLKHFFDSIT 60
Query: 65 VFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I +E + +++S NK+ +FL ++ +
Sbjct: 61 PSFYFDFNKVKSICDVGAGAGFPSIPLKILYPHLE---ITIVDSLNKRINFLNHLSAELN 117
Query: 123 A-RGKVFACRIQEAP--QMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 118 LTNCHFVHDRAETFGKGEYRESFDVVTARAVARLSVLSELCLPLVKK 164
>gi|212640675|ref|YP_002317195.1| 16S rRNA methyltransferase GidB [Anoxybacillus flavithermus WK1]
gi|212562155|gb|ACJ35210.1| Methyltransferase GidB [Anoxybacillus flavithermus WK1]
Length = 238
Score = 120 bits (301), Expect = 6e-26, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
++S + L + E +Y L ++W++++NL + + E +++H DS+ + +
Sbjct: 14 KGISLSPQQLTQFETYYQLLVEWNERMNLTAITDKEGVYLKHFFDSITPAFYYDFSQPLS 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D+G+G GFP I I + V++++S K+ +FL ++ + G F E
Sbjct: 74 ICDVGAGAGFPSIPLKICFPHL---HVSIVDSLQKRITFLNHLAAQLGLEGVAFYHDRAE 130
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + DV+ ARA+A L L E P +
Sbjct: 131 TFGQKSVRESFDVVMARAVARLSVLSELCLPLVK 164
>gi|150392471|ref|YP_001322520.1| methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
gi|166989741|sp|A6TXE3|RSMG_ALKMQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149952333|gb|ABR50861.1| methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
Length = 239
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+S IL+ +++ +++L + + L+W++K+NL + + E+ ++H DSL
Sbjct: 1 MESKMILKDGCQELGFHIDDNQVQQLLTYKDILLEWNEKMNLTAITEEEEVMVKHFLDSL 60
Query: 64 RVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
Q ID+G+G GFPGI + ++ + L++S NK+ FL+ V Q+
Sbjct: 61 SCIQSQYLKEEGTMIDVGTGAGFPGIPLKVYFPKLK---LTLLDSLNKRVEFLKEVSQEL 117
Query: 122 AA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R +E Q D ARA+A L+ L+EY P++
Sbjct: 118 GLEDVNFVHGRAEECGQEETHREQYDYAVARAVASLNVLVEYCLPFVK 165
>gi|239833101|ref|ZP_04681430.1| methyltransferase GidB [Ochrobactrum intermedium LMG 3301]
gi|239825368|gb|EEQ96936.1| methyltransferase GidB [Ochrobactrum intermedium LMG 3301]
Length = 213
Score = 120 bits (300), Expect = 7e-26, Method: Composition-based stats.
Identities = 70/146 (47%), Positives = 92/146 (63%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ + W RH+ DS ++F L W+D+GS
Sbjct: 17 VSRETADRLIAFEELFRKWSKAINLASPSTLNELWTRHILDSAQLFPLARDVRNWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++LIES KKA+FLR +V + RI+ Q I
Sbjct: 77 GGGFPGIVTACFLAEQPGGAIDLIESAGKKAAFLRTAAGHLNVPARVHSARIETMWQKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T DV++ARALA LD L + PWL +
Sbjct: 137 TPDVVTARALASLDDLFGLTEPWLTR 162
>gi|242243260|ref|ZP_04797705.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
gi|242233209|gb|EES35521.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
Length = 239
Score = 120 bits (300), Expect = 7e-26, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + L +S E+ + +Y L ++W+KK+NL S + D +++H DS+
Sbjct: 1 MNIEWLSEKLSEQGIELSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA 60
Query: 65 VFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 61 PSFYYDFNGQLSLCDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELG 117
Query: 123 A-RGKVFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 118 LEDVSFVHDRAETYGKGVYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|121602548|ref|YP_988351.1| glucose-inhibited division protein B [Bartonella bacilliformis
KC583]
gi|166224576|sp|A1UQU8|RSMG_BARBK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120614725|gb|ABM45326.1| methyltransferase GidB [Bartonella bacilliformis KC583]
Length = 215
Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Query: 11 RANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ LLN +VSRET+E L F L ++W+ INL+S++TV W RH+ DS +++ L+
Sbjct: 8 KYQELLNMLPSVSRETMENLIQFESLIIQWNAHINLISAATVPFLWTRHILDSAQIYPLY 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
W DLGSGGGFP I+ +I L + G ++LIES KK +FLR V+ + V+
Sbjct: 68 SQCLHWCDLGSGGGFPAIVIAIFLKEKQKGHIDLIESNGKKVAFLRTVIAQLNLPATVYH 127
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
CRI++ Q I ++I+AR LA L+TLL+ +FPWL QK
Sbjct: 128 CRIEDVYQKINAPEIITARGLASLNTLLQLTFPWLKQK 165
>gi|86359699|ref|YP_471591.1| glucose-inhibited division protein B [Rhizobium etli CFN 42]
gi|123510387|sp|Q2K2S2|RSMG_RHIEC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86283801|gb|ABC92864.1| glucose inhibited division protein B [Rhizobium etli CFN 42]
Length = 205
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 84/153 (54%), Positives = 113/153 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++ W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQGRLQHFALLFQKWAKTINLVAPSTLDALWHRHIADSSQIFQICPRPVTW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++GG V+L+ES +KKA+FLR +++T ARG V A RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELQGGWVHLVESNHKKAAFLRTALRETNARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
I CD ISARALADLD L+ YS PW+ K+
Sbjct: 123 SAEIGDCDAISARALADLDGLIAYSAPWMLGKE 155
>gi|326797438|ref|YP_004315258.1| ribosomal RNA small subunit methyltransferase G [Marinomonas
mediterranea MMB-1]
gi|326548202|gb|ADZ93422.1| Ribosomal RNA small subunit methyltransferase G [Marinomonas
mediterranea MMB-1]
Length = 208
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 4/156 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+++ L ++S TLE+L + L KW+K NL + + H+ DSL
Sbjct: 5 EMIQKGALDLGLSLSENTLEQLGRYLELLQKWNKAYNLTAIREADQMVSLHLIDSLSTVP 64
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
ID+G+G G PG++ +I L L++S KK FL V
Sbjct: 65 FIK-GDKIIDVGTGPGLPGMVLAICLPEK---SFTLLDSNGKKTRFLTQVKMDLGLENVT 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A E D + +RA A L+ ++ + P
Sbjct: 121 VANERVEKHANQGQYDHVISRAFASLEDMINWCLPL 156
>gi|157694473|ref|YP_001488935.1| 16S rRNA methyltransferase GidB [Bacillus pumilus SAFR-032]
gi|166989743|sp|A8FJF8|RSMG_BACP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157683231|gb|ABV64375.1| glucose-inhibited division protein B [Bacillus pumilus SAFR-032]
Length = 239
Score = 120 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
+S LE+ E ++ + ++W++K+NL S + E+ +++H DS+ F +
Sbjct: 13 KGITLSPVQLEQFETYFRMLVEWNEKMNLTSITEKEEVYLKHFYDSISASFFIDFHKVTT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----AC 130
D+G+G GFP I I + V +++S K+ +FL + + + F A
Sbjct: 73 ICDIGAGAGFPSIPLKICFPHL---HVTIVDSLQKRITFLNELAKGLNLQDTTFYHDRAE 129
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + + D+++ARA+A L L E P + ++
Sbjct: 130 TFGQRKEKRESYDLVTARAVARLSVLSELCLPLVKKE 166
>gi|229824650|ref|ZP_04450719.1| hypothetical protein GCWU000282_01997 [Catonella morbi ATCC 51271]
gi|229786021|gb|EEP22135.1| hypothetical protein GCWU000282_01997 [Catonella morbi ATCC 51271]
Length = 240
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N A + ++ + + + E ++ L ++W++K+NL + + E+ +++H D L
Sbjct: 1 MNPETFIAQCAAHGLVLNDQQIAQFERYFQLLVEWNEKMNLTAITQREEVYLKHFYDCLM 60
Query: 65 VFQLHPYPSIW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P + D+G+G GFP I I ++ V +++S K+ +F+ ++ ++
Sbjct: 61 ALWNMPLDNYALQLCDVGAGAGFPSIPLKIAHPELQ---VTIVDSLQKRLTFIEHLAEEL 117
Query: 122 AAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A L+ L EY P +
Sbjct: 118 GLEGVSCVHGRAEDVGQNPVYRGQFDLVTARAVASLNVLAEYCLPLVK 165
>gi|319399919|gb|EFV88165.1| methyltransferase GidB [Staphylococcus epidermidis FRI909]
Length = 239
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
+S E+ + +Y L ++W+KK+NL S + D +++H DS+ + +
Sbjct: 14 GIELSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIAPSFYYDFNGQLSL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 74 CDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAET 130
Query: 135 APQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A L L E P + +
Sbjct: 131 YGKGVYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|327438169|dbj|BAK14534.1| predicted S-adenosylmethionine-dependent methyltransferase
[Solibacillus silvestris StLB046]
Length = 238
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL- 63
N L +S + + + ++ L ++W++K+NL + + +E +++H DS+
Sbjct: 1 MNEKQFIEALKEKGIELSEHQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFYDSIS 60
Query: 64 -RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP I I ++ + +++S NK+ +FL ++ +
Sbjct: 61 ASFYFDFTKVTTVCDVGAGAGFPSIPIKICFPHLQ---ITIVDSLNKRITFLNHLTNELN 117
Query: 123 A-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E Q DV++ARA+A L L E P +
Sbjct: 118 LDHMTFVHARAEEFGQNAAYREKFDVVTARAVARLSVLSELCIPLAKE 165
>gi|289436054|ref|YP_003465926.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289172298|emb|CBH28844.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 238
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N +N L +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFSNALAEKGIELSEAQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I +E +V+ ++ + L + T
Sbjct: 61 AAFYVDFNDFHSICDVGAGAGFPSIPIKICFPHLEVSIVDSLKKRMTFLDALAEKLALT- 119
Query: 123 ARGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + + D+++ARA+A + L E P + +
Sbjct: 120 -NVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCLPLVKK 165
>gi|327191202|gb|EGE58245.1| glucose-inhibited division protein B [Rhizobium etli CNPAF512]
Length = 205
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 82/153 (53%), Positives = 112/153 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETRARLQHFAALFQKWAKTINLVAPSTLDDLWHRHIADSSQIFQICPEPIRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V A RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETEARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I C ISARALADL+ L+ Y+ PW+ K+
Sbjct: 123 PAEIGECGAISARALADLNGLIGYAAPWMLGKE 155
>gi|16804839|ref|NP_466324.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes EGD-e]
gi|47095609|ref|ZP_00233217.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|224502785|ref|ZP_03671092.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-561]
gi|254899740|ref|ZP_05259664.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J0161]
gi|254913057|ref|ZP_05263069.1| methyltransferase gidB [Listeria monocytogenes J2818]
gi|254937438|ref|ZP_05269135.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|255028091|ref|ZP_05300042.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes LO28]
gi|284800312|ref|YP_003412177.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284993497|ref|YP_003415265.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|20177887|sp|Q8Y3N3|RSMG_LISMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16412302|emb|CAD01015.1| GidB protein [Listeria monocytogenes EGD-e]
gi|47016039|gb|EAL06964.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|258610040|gb|EEW22648.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|284055874|gb|ADB66815.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284058964|gb|ADB69903.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|293591057|gb|EFF99391.1| methyltransferase gidB [Listeria monocytogenes J2818]
Length = 238
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + +S + +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFQMALAEKGIELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP + I ++ +V+ ++ + L + T
Sbjct: 61 AAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTD 120
Query: 123 AR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + D+++ARA+A + L E P + +
Sbjct: 121 VHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|255659829|ref|ZP_05405238.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
gi|260847904|gb|EEX67911.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
Length = 237
Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
++ +S L + +Y L ++W++K+NL + + + ++H+ DSL +
Sbjct: 6 MKKAAEDFGLTLSENQLAQFTRYYELLVEWNEKMNLTAITEEHEVAVKHMVDSLSAYDPA 65
Query: 69 -HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
ID+G+G GFPG+ I + L++S NK+ +FL+ VV +
Sbjct: 66 LFDGEISIIDVGTGAGFPGLPLKIFCP---QVHLTLMDSLNKRVNFLQTVVDELGLEDVD 122
Query: 127 VFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E + D+ +RA+A L L EY P++ +
Sbjct: 123 CVHARAEEGARMKKYREQYDLAVSRAVARLPILCEYCLPFVKR 165
>gi|224475499|ref|YP_002633105.1| 16S rRNA methyltransferase GidB [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254766902|sp|B9DI97|RSMG_STACT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222420106|emb|CAL26920.1| glucose inhibited division protein B [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 240
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSI 74
+ ++ + ++ + +Y L ++W++K+NL S + E +++H D + +
Sbjct: 13 HDITLNDKQKQQFQTYYELLVEWNEKMNLTSITDEEGVYLKHFYDSITAAFYIDMNQELS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ R V R +
Sbjct: 73 ICDVGAGAGFPSIPLKIVFPQLK---VTIVDSLNKRIQFLNHLADALDLRGVSVVHERAE 129
Query: 134 EAPQ----MITTCDVISARALADLDTLLEYSFPWLY 165
+ D+++ARA+A L L E P +
Sbjct: 130 NFGNVRGDNRESYDIVTARAVARLSVLSELCLPLVK 165
>gi|23100944|ref|NP_694411.1| glucose-inhibited division protein B [Oceanobacillus iheyensis
HTE831]
gi|29336682|sp|Q8EKU4|RSMG_OCEIH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22779179|dbj|BAC15445.1| glucose-inhibited division protein B [Oceanobacillus iheyensis
HTE831]
Length = 238
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
N+S + E+ ++ ++W++K+NL + + E+ +++H D + +
Sbjct: 13 KGINLSEKQTEQFYIYFQELVEWNQKVNLTAITDQEEVYVKHFYDCVTAAFYHDFNQEIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----AC 130
D+G+G GFP I I ++ + +++S K+ +FL ++ K F A
Sbjct: 73 ICDIGAGAGFPSIPLKIVFPQLK---ITIVDSLKKRITFLNHLATKLELSNVAFYHDRAE 129
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A + L E P + +
Sbjct: 130 NFGKNKTFRESFDIVTARAVARMSVLSELCLPLVKK 165
>gi|254827370|ref|ZP_05232057.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
gi|254830761|ref|ZP_05235416.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 10403S]
gi|255016996|ref|ZP_05289122.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL F2-515]
gi|255025452|ref|ZP_05297438.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-003]
gi|258599748|gb|EEW13073.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
Length = 238
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + +S + +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFQMALAEKGIELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP + I ++ +V+ ++ + L + T
Sbjct: 61 AAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTD 120
Query: 123 AR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + D+++ARA+A + L E P + +
Sbjct: 121 VHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|288554599|ref|YP_003426534.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
gi|288545759|gb|ADC49642.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
Length = 237
Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
S + + ++S + L++ E ++ + ++W++K+NL + ++ ED +I+H DS+
Sbjct: 2 SKDVFVSLVKERGIDLSEKQLQQFERYFNILVEWNEKMNLTALTSEEDVYIKHFYDSISA 61
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + ID+G+G GFP I I I V++++S K+ FL ++ +
Sbjct: 62 SFFYSFEAGQKIIDVGAGAGFPSIPLKILYPEI---HVSIVDSLKKRIGFLEHLASELEL 118
Query: 124 RGKVF----ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
G F A + P D+++ARA+A + L E P +
Sbjct: 119 DGVAFYHDRAETFGQNPAHREQYDIVTARAVARMSVLAELCLPLVK 164
>gi|315640393|ref|ZP_07895506.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
gi|315483849|gb|EFU74332.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
Length = 238
Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSIW 75
++ E + + + ++ L ++W++KINL + + ++ +++H DS+ + +
Sbjct: 14 GIQLTDEQMYQFKRYFELLVEWNEKINLTAITEEKEVYLKHFYDSILLAFSEDFDANASL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ- 133
D+GSG GFP I I +++ V +++S NK+ +FL +VQ+ ++ R +
Sbjct: 74 CDVGSGAGFPSIPLKIVFPTLQ---VTIVDSLNKRITFLNELVQELGLEQVSLYHDRAET 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D ++ARA+A L+ L E P + +
Sbjct: 131 FGQNRDFRESFDYVTARAVARLNVLSELCLPLVKK 165
>gi|259048139|ref|ZP_05738540.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
gi|259035200|gb|EEW36455.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
Length = 237
Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSI 74
++ +S E ++ + ++ L ++W++K+NL + + E +++H DSL + H
Sbjct: 13 IHGITLSDEQKKQFDQYFHLLVEWNEKMNLTAITDEEGVYLKHFYDSLALGFHHELTDQT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ +FL +V+ + + F R +
Sbjct: 73 LCDVGAGAGFPSIPLKIVFPDLK---VTIVDSLNKRITFLNTLVETLGLKDVQCFHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E+ P + +
Sbjct: 130 TFGQNKDFRASFDVVTARAVAKLSVLSEFCMPLVKK 165
>gi|288575860|ref|ZP_05977731.2| 16S rRNA methyltransferase GidB [Neisseria mucosa ATCC 25996]
gi|288566893|gb|EFC88453.1| 16S rRNA methyltransferase GidB [Neisseria mucosa ATCC 25996]
Length = 295
Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L++ ++S E L + L KW+K NL + H+ DSL +
Sbjct: 95 LQSGIQALGLDLSAEQQTLLLAYTDLLKKWNKTYNLTALRDEAQMVSHHLLDSLTLLPYL 154
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI T+I + + L+++ KK +FL+ V + +V
Sbjct: 155 QGAQTMLDVGSGGGQPGIPTAICHPDLN---ITLLDANTKKTAFLQQAVIELGLANVRVV 211
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ D+I++RA A+L + ++ L
Sbjct: 212 SGRVEAVQDF--QADIITSRAFAELADFVNWTAHLLKD 247
>gi|163791212|ref|ZP_02185629.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
gi|159873543|gb|EDP67630.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
Length = 238
Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N N L V+ + +++ + + L +W++KINL + + E+ +++H DS+
Sbjct: 1 MNPEEFKNALEDKGITVTEKQMKQFDQYLKLLQEWNEKINLTAITEKEEVYLKHFYDSIT 60
Query: 65 ---VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ D+G+G GFP I I +E +V+ + + + + L ++
Sbjct: 61 AGLYVNFNNGVQSLCDVGAGAGFPSIPLKIIFPQLEVTIVDSLNKRIQFLTLLAKTLELD 120
Query: 122 AAR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + Q + D ++ARA+A + L E P + +
Sbjct: 121 GVHFYHDRAETFGQNKQFRESFDFVTARAVARMSVLAELCLPLVKK 166
>gi|257899263|ref|ZP_05678916.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|293572710|ref|ZP_06683674.1| methyltransferase GidB [Enterococcus faecium E980]
gi|257837175|gb|EEV62249.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|291607202|gb|EFF36560.1| methyltransferase GidB [Enterococcus faecium E980]
Length = 237
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
R + ++ +E+ +Y ++W++K+NL + + +D +++H D +L
Sbjct: 4 EEFRQSLAEKGIELTDHQMEQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P D+GSG GFP + I ++ + +++S NK+ +FL + +
Sbjct: 64 EVDFTQPLSLCDVGSGAGFPSVPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDA 120
Query: 126 KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + PQ + D+++ARA+A L+ L E P Q+
Sbjct: 121 SLYHDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|218516416|ref|ZP_03513256.1| glucose-inhibited division protein B [Rhizobium etli 8C-3]
Length = 205
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 82/153 (53%), Positives = 111/153 (72%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQARLQHFAALFQKWAKTINLVAPSTLDDLWHRHIADSSQIFQICPEPIRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FL +++T ARG V A RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLMTALRETEARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I C ISARALADLD L+ Y+ PW+ K+
Sbjct: 123 PAEIGECGAISARALADLDGLIGYAAPWMLGKE 155
>gi|194016524|ref|ZP_03055138.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
gi|194011997|gb|EDW21565.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
Length = 239
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
+S LE+ E ++ + ++W++K+NL S + E+ +++H DS+ F +
Sbjct: 13 KGMTLSPVQLEQFETYFRMLVEWNEKMNLTSITEKEEVYLKHFYDSISASFFIDFHKVTT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----AC 130
D+G+G GFP I I + V +++S K+ +FL + + + F A
Sbjct: 73 ICDIGAGAGFPSIPLKICFPHL---HVTIVDSLQKRITFLNELAKGLNLQDTTFYHDRAE 129
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + + D+++ARA+A L L E P + ++
Sbjct: 130 TFGQRKEKRESYDLVTARAVARLSVLSELCLPLVKKE 166
>gi|146278698|ref|YP_001168857.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17025]
gi|189040716|sp|A4WVY8|RSMG_RHOS5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145556939|gb|ABP71552.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17025]
Length = 208
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 62/155 (40%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS- 73
+ NVSRETL KLE + L KW+ INL+ ST WIRH++DS +++ L P
Sbjct: 8 VAEALNVSRETLGKLEQYADLVRKWNSAINLIGRSTEGQIWIRHIQDSAQLWGLRAAPFG 67
Query: 74 IWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+DLGSGGG PGI+ + + L+ES +KA+FLR + V A R+
Sbjct: 68 TWLDLGSGGGLPGIVLATIATEKAPESRFVLVESDQRKATFLRTAARTLCLNVTVHAARV 127
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ P DVISARALA L L + P L +
Sbjct: 128 EQLPPQR--ADVISARALAPLTDLCALAAPHLAPE 160
>gi|163757463|ref|ZP_02164552.1| glucose-inhibited division protein B [Hoeflea phototrophica DFL-43]
gi|162284965|gb|EDQ35247.1| glucose-inhibited division protein B [Hoeflea phototrophica DFL-43]
Length = 208
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 74/157 (47%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+R L + + VSRET E+LE + L KW +INL+S T+ D W RH+ DSL++F L
Sbjct: 1 MRQYPLDSGF-VSRETRERLETYADLVRKWQSRINLISPKTLPDLWNRHIIDSLQLFALK 59
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P P W+D+GSG GFPG++T+I L+ I G V+L+ES NKKA+FLR V+ +T AR V
Sbjct: 60 PQPVQWMDIGSGAGFPGLVTAICLTEIGEGWVHLVESNNKKAAFLRQVIGQTGARASVLP 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI A + + D ISARALA L LL + P++
Sbjct: 120 IRIDAARAKVGSMDAISARALASLPDLLSHCAPFVED 156
>gi|319891295|ref|YP_004148170.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
gi|317160991|gb|ADV04534.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
Length = 239
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ +S ++ E +Y + ++W++KINL S + + +++H DS+ H +
Sbjct: 13 HGITLSEHQKQQFEKYYEMLVEWNEKINLTSITEKHEVYLKHFYDSITPSFYHDFNQPLN 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP I I I +V+ + + + + L ++ R A
Sbjct: 73 LCDVGAGAGFPSIPLKIIFPEIHVTIVDALNKRIQFLNQLAEALELEGVRFVHDRAETFA 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ DV++ARA+A + L E P + +
Sbjct: 133 KNEDYRSSFDVVTARAVARMTVLSELCIPLVKK 165
>gi|226315525|ref|YP_002775421.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
gi|254766884|sp|C0ZA63|RSMG_BREBN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226098475|dbj|BAH46917.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
Length = 238
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 10 LRANYLLN-----TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ +++ E+ ++F+ L ++W++K+NL + + +H DS+
Sbjct: 1 MTKEQFAEVLAAQGISLTDRQKEQFDHFFRLLVEWNEKMNLTGITEEGQVYNKHFYDSIT 60
Query: 65 VFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
P+ + +D+G G GFP I I ++ +I+S NK+ SFL++V ++
Sbjct: 61 PAFYFPFDQVQSVVDIGGGAGFPSIPLKICFPHLKM---TIIDSLNKRMSFLQHVAKELG 117
Query: 123 A-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D++ ARA+A L+ L E+ P+
Sbjct: 118 LENVNPVHGRAEDRGQEAMYREKFDLVVARAVARLNLLSEFCLPFAK 164
>gi|295402129|ref|ZP_06812088.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|312112750|ref|YP_003991066.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
gi|294975812|gb|EFG51431.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|311217851|gb|ADP76455.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
Length = 238
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
+S + L + E +Y L ++W++K+NL + + +++H DSL + + D+
Sbjct: 17 LSSQALAQFERYYELLIEWNEKMNLTAITDKPSVYLKHFFDSLSPAFYYDFSQSLSLCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ---E 134
G+G GFP I I ++ +++++S K+ FL ++ + + + R +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---LSVVDSLQKRIHFLEHLAAELGLADVEFYHDRAETFGR 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + DV+ ARA+A + L E P +
Sbjct: 134 NKEFRESFDVVIARAVARMPVLSELCLPLVK 164
>gi|16801993|ref|NP_472261.1| 16S rRNA methyltransferase GidB [Listeria innocua Clip11262]
gi|20177891|sp|Q926V6|RSMG_LISIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16415475|emb|CAC98159.1| GidB protein [Listeria innocua Clip11262]
Length = 238
Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + +S + +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFQMALAEKGIELSDDQMKQFHDYFKMLVEWNEKMNLTAITDEKEVYLKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP + I ++ +V+ ++ + L + T
Sbjct: 61 AAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTD 120
Query: 123 AR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + D+++ARA+A + L E P + +
Sbjct: 121 VHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|290891984|ref|ZP_06554981.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
gi|290558578|gb|EFD92095.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
Length = 238
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSI 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP + I ++ V++++S K+ +FL + +K + R +
Sbjct: 73 ICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A + L E P + +
Sbjct: 130 TFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|226225352|ref|YP_002759459.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes Clip81459]
gi|259495498|sp|C1L0D6|RSMG_LISMC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225877814|emb|CAS06529.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. CLIP 80459]
Length = 238
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSI 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP + I ++ V++++S K+ +FL + +K + R +
Sbjct: 73 ICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A + L E P + +
Sbjct: 130 TFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|254824832|ref|ZP_05229833.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|254851894|ref|ZP_05241242.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|254930924|ref|ZP_05264283.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|254992360|ref|ZP_05274550.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-064]
gi|255024123|ref|ZP_05296109.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J1-208]
gi|300763440|ref|ZP_07073438.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|258605190|gb|EEW17798.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|293582471|gb|EFF94503.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|293594074|gb|EFG01835.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|300515717|gb|EFK42766.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|328469139|gb|EGF40087.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 220]
gi|332313232|gb|EGJ26327.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes str. Scott A]
Length = 238
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSI 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP + I ++ V++++S K+ +FL + +K + R +
Sbjct: 73 ICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A + L E P + +
Sbjct: 130 TFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|257896276|ref|ZP_05675929.1| glucose inhibited division protein [Enterococcus faecium Com12]
gi|257832841|gb|EEV59262.1| glucose inhibited division protein [Enterococcus faecium Com12]
Length = 237
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
R + ++ +++ +Y ++W++K+NL + + +D +++H D +L
Sbjct: 4 EEFRQSLAEKGIELTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P D+GSG GFP + I ++ + +++S NK+ +FL + +
Sbjct: 64 EVDFTQPLSLCDVGSGAGFPSMPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDA 120
Query: 126 KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + PQ + D+++ARA+A L+ L E P Q+
Sbjct: 121 SLYHDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|323465552|gb|ADX77705.1| 16S rRNA methyltransferase GidB [Staphylococcus pseudintermedius
ED99]
Length = 239
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+ +S ++ E +Y + ++W++KINL S + + +++H DS+ H +
Sbjct: 13 HGITLSEHQKQQFEKYYEMLVEWNEKINLTSITEKHEVYLKHFYDSITPSFYHDFNQSLN 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP I I I +V+ + + + + L ++ R A
Sbjct: 73 LCDVGAGAGFPSIPLKIIFPEIHVTIVDALNKRIQFLNQLAEALELEGVRFVHDRAETFA 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A + L E P + +
Sbjct: 133 KNEDYRASFDVVTARAVARMTVLSELCIPLVKK 165
>gi|315284177|ref|ZP_07872085.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
gi|313612177|gb|EFR86411.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
Length = 238
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSI 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFES 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP I I ++ +V+ ++ + L + T A
Sbjct: 73 ICDVGAGAGFPSIPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D ++ARA+A + L E P + +
Sbjct: 133 QNKAHREKYDFVTARAVARMSVLSELCMPLVKK 165
>gi|257888105|ref|ZP_05667758.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|293379357|ref|ZP_06625501.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
gi|257824159|gb|EEV51091.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|292641880|gb|EFF60046.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
Length = 237
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
R + ++ +++ +Y ++W++K+NL + + +D +++H D +L
Sbjct: 4 EEFRQSLAEKGIELTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P D+GSG GFP I I ++ + +++S NK+ +FL + +
Sbjct: 64 EVDFTQPLSLCDVGSGAGFPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDA 120
Query: 126 KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + PQ + D+++ARA+A L+ L E P Q+
Sbjct: 121 SLYHDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|227550629|ref|ZP_03980678.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
gi|227180230|gb|EEI61202.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
Length = 242
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
R + ++ +++ +Y ++W++K+NL + + +D +++H D +L
Sbjct: 9 EEFRQSLAEKGIELTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAF 68
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P D+GSG GFP + I ++ + +++S NK+ +FL + +
Sbjct: 69 EVDFTQPLSLCDVGSGAGFPSMPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDA 125
Query: 126 KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + PQ + D+++ARA+A L+ L E P Q+
Sbjct: 126 SLYHDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQE 170
>gi|190893977|ref|YP_001980519.1| glucose inhibited division protein B [Rhizobium etli CIAT 652]
gi|238692505|sp|B3PS51|RSMG_RHIE6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|190699256|gb|ACE93341.1| glucose inhibited division protein B [Rhizobium etli CIAT 652]
Length = 205
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 81/153 (52%), Positives = 110/153 (71%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQARLQHFAALFQKWAKTINLVAPSTLDDLWHRHIADSSQIFQICPEPIRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G +L+ES +KKA+FL +++T ARG V A RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWAHLVESNHKKAAFLMTALRETEARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I C ISARALADLD L+ Y+ PW+ K+
Sbjct: 123 PAEIGECGAISARALADLDGLIGYAAPWMLGKE 155
>gi|57865944|ref|YP_187605.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis RP62A]
gi|293367586|ref|ZP_06614239.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|71152076|sp|Q5HS34|RSMG_STAEQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|57636602|gb|AAW53390.1| glucose-inhibited division protein B [Staphylococcus epidermidis
RP62A]
gi|291318299|gb|EFE58692.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736094|gb|EGG72367.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU045]
Length = 239
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+S E+ + +Y L ++W+KK+NL S + D +++H DS+ + +
Sbjct: 14 GIELSNTQKEQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIAPSFYYDFNGQLSL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 74 CDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAEI 130
Query: 135 APQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A L L E P + +
Sbjct: 131 YGKGVYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|297531685|ref|YP_003672960.1| methyltransferase GidB [Geobacillus sp. C56-T3]
gi|297254937|gb|ADI28383.1| methyltransferase GidB [Geobacillus sp. C56-T3]
Length = 238
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
+S L + E +Y L ++W++K+NL + + +++H DS+ + + + D+
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVSPAFYYDFSAPLALCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ---E 134
GSG GFP + I + V++++S K+ FL +++ + ++ R +
Sbjct: 77 GSGAGFPSLPLKICFPHLR---VSIVDSLQKRIRFLEHLITELGLADVALYHERAETFAR 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
M + DV++ARA+A + L+E P +
Sbjct: 134 QKGMRESFDVVTARAVARMPVLVELCLPLVK 164
>gi|217965994|ref|YP_002351672.1| methyltransferase GidB [Listeria monocytogenes HCC23]
gi|254766895|sp|B8DD12|RSMG_LISMH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217335264|gb|ACK41058.1| methyltransferase GidB [Listeria monocytogenes HCC23]
gi|307572390|emb|CAR85569.1| glucose-inhibited division protein B [Listeria monocytogenes L99]
Length = 238
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSI 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP + I ++ V++++S K+ +FL + +K + R +
Sbjct: 73 ICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A + L E P + +
Sbjct: 130 IFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|56422027|ref|YP_149345.1| 16S rRNA methyltransferase GidB [Geobacillus kaustophilus HTA426]
gi|81557669|sp|Q5KU59|RSMG_GEOKA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56381869|dbj|BAD77777.1| glucose-inhibited division protein [Geobacillus kaustophilus
HTA426]
Length = 238
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
+S L + E +Y L ++W++K+NL + + +++H DS+ + + + D+
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVSPAFYYDFSAPLALCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ---E 134
GSG GFP + I + V++++S K+ FL +++ + ++ R +
Sbjct: 77 GSGAGFPSLPLKICFPHLR---VSIVDSLQKRIRFLEHLITELGLADVALYHERAETFAR 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
M + DV++ARA+A + L+E P +
Sbjct: 134 QKGMRESFDVVTARAVARMPVLVELCLPLVK 164
>gi|47093263|ref|ZP_00231034.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|47018337|gb|EAL09099.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|328468275|gb|EGF39281.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 1816]
Length = 238
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSI 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ V+
Sbjct: 13 KGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAVYVDFTKFDT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP + I ++ V++++S K+ +FL + +K + R +
Sbjct: 73 ICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A + L E P + +
Sbjct: 130 TFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|299541772|ref|ZP_07052095.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
gi|298725510|gb|EFI66151.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
Length = 238
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L +S + + + ++ L ++W++K+NL + + +E +++H DS+
Sbjct: 1 MNEQQFIEALKEKGIELSDIQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSIS 60
Query: 65 VFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I ++ V +++S NK+ +FL ++ +
Sbjct: 61 PSFYFDFSKVITVCDVGAGAGFPSIPIKICFPHLQ---VTIVDSLNKRITFLNHLSDELQ 117
Query: 123 A-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
R +E Q DV++ARA+A L L E P Q+
Sbjct: 118 LENMHFVHARAEEFGQNLKYREQFDVVTARAVARLSVLAELCVPLAKQE 166
>gi|116874155|ref|YP_850936.1| glucose-inhibited division protein B [Listeria welshimeri serovar
6b str. SLCC5334]
gi|123461489|sp|A0AMC5|RSMG_LISW6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116743033|emb|CAK22157.1| glucose-inhibited division protein B [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 238
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 69/165 (41%), Gaps = 4/165 (2%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + +S +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFKTALAEKGIELSATQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSIS 60
Query: 65 VFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I ++ +V+ ++ + L + T
Sbjct: 61 ATFYVDFTSFDSICDVGAGAGFPSIPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTD 120
Query: 123 AR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + D+++ARA+A + L E P + +
Sbjct: 121 VHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLAELCIPLVKK 165
>gi|313621875|gb|EFR92552.1| 16S rRNA methyltransferase GidB [Listeria innocua FSL J1-023]
Length = 238
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + +S + +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFQMALAEKGIELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHXXDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP + I ++ +V+ ++ + L + T
Sbjct: 61 AAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTD 120
Query: 123 AR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + D+++ARA+A + L E P + +
Sbjct: 121 VHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLAELCMPLVKK 165
>gi|229000271|ref|ZP_04159840.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
gi|229007796|ref|ZP_04165382.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228753473|gb|EEM02925.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228759603|gb|EEM08580.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
Length = 239
Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
N+S LE+ E ++ ++W++K+NL + + E+ +++H D + + P
Sbjct: 14 GINLSPRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYNDFSKPFSI 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F E
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAET 130
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 131 FGKKEGVRESFDIVMARAVARLSVLSELCLPLVK 164
>gi|258423242|ref|ZP_05686134.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|257846571|gb|EEV70593.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|302334324|gb|ADL24517.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus JKD6159]
gi|323439703|gb|EGA97421.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O11]
gi|323443276|gb|EGB00893.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O46]
Length = 239
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|29377741|ref|NP_816895.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis V583]
gi|255971517|ref|ZP_05422103.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255974467|ref|ZP_05425053.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256761822|ref|ZP_05502402.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256957048|ref|ZP_05561219.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256960912|ref|ZP_05565083.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256963950|ref|ZP_05568121.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|257078725|ref|ZP_05573086.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|257083973|ref|ZP_05578334.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257417390|ref|ZP_05594384.1| glucose inhibited division protein [Enterococcus faecalis AR01/DG]
gi|257418873|ref|ZP_05595867.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257421312|ref|ZP_05598302.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|38257437|sp|Q82YY1|RSMG_ENTFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29345209|gb|AAO82965.1| glucose-inhibited division protein B [Enterococcus faecalis V583]
gi|255962535|gb|EET95011.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255967339|gb|EET97961.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256683073|gb|EEU22768.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256947544|gb|EEU64176.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256951408|gb|EEU68040.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256954446|gb|EEU71078.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|256986755|gb|EEU74057.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|256992003|gb|EEU79305.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257159218|gb|EEU89178.1| glucose inhibited division protein [Enterococcus faecalis ARO1/DG]
gi|257160701|gb|EEU90661.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257163136|gb|EEU93096.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|323479207|gb|ADX78646.1| methyltransferase GidB [Enterococcus faecalis 62]
Length = 238
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 4 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 64 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 120
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 121 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 166
>gi|313635557|gb|EFS01770.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL N1-067]
Length = 238
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N +N L +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFSNALAEKGIELSEVQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I +E +V+ ++ + L + T
Sbjct: 61 AAFYVDFNDFHSICDVGAGAGFPSIPIKICFPHLEVSIVDSLKKRMTFLDALAEKLALT- 119
Query: 123 ARGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + + D+++ARA+A + L E P + +
Sbjct: 120 -NVHFYHDRAETFGQNKAHRERYDLVTARAVARMSVLSELCLPLVKK 165
>gi|256854949|ref|ZP_05560310.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
gi|256709462|gb|EEU24509.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
Length = 238
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 4 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 64 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 120
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 121 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 166
>gi|46908989|ref|YP_015378.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes serotype 4b
str. F2365]
gi|55976451|sp|Q71VW1|RSMG_LISMF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46882262|gb|AAT05555.1| glucose-inhibited division protein B [Listeria monocytogenes
serotype 4b str. F2365]
Length = 238
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP + I +E V++++S K+ +FL + +K
Sbjct: 61 AAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLE---VSIVDSLKKRMTFLDALAEKLG 117
Query: 123 A-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + + D+++ARA+A + L E P + +
Sbjct: 118 LTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|21284357|ref|NP_647445.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MW2]
gi|49487487|ref|YP_044708.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651104|ref|YP_187522.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus COL]
gi|87161954|ref|YP_495278.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196665|ref|YP_501496.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151222822|ref|YP_001333644.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161510919|ref|YP_001576578.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253730395|ref|ZP_04864560.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|258451371|ref|ZP_05699402.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|262049465|ref|ZP_06022337.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|262051896|ref|ZP_06024111.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|282920715|ref|ZP_06328434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|284023033|ref|ZP_06377431.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 132]
gi|294849824|ref|ZP_06790564.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|297209456|ref|ZP_06925854.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911480|ref|ZP_07128929.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|23821578|sp|Q8NUF9|RSMG_STAAW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976399|sp|Q6G5W6|RSMG_STAAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71152075|sp|Q5HCI5|RSMG_STAAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122538498|sp|Q2FUQ4|RSMG_STAA8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123484189|sp|Q2FDF0|RSMG_STAA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|172049079|sp|A6QKK0|RSMG_STAAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040723|sp|A8YYR9|RSMG_STAAT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21205801|dbj|BAB96493.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus MW2]
gi|49245930|emb|CAG44411.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285290|gb|AAW37384.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus COL]
gi|87127928|gb|ABD22442.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87204223|gb|ABD32033.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150375622|dbj|BAF68882.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160369728|gb|ABX30699.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253725875|gb|EES94604.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|257860901|gb|EEV83718.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|259160223|gb|EEW45252.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|259162462|gb|EEW47032.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|282594123|gb|EFB99111.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|294823372|gb|EFG39801.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|296885917|gb|EFH24852.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887659|gb|EFK82855.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|315197914|gb|EFU28247.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141413|gb|EFW33256.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144396|gb|EFW36161.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329731847|gb|EGG68207.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21189]
gi|329732581|gb|EGG68931.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21193]
Length = 239
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIQLTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|295707336|ref|YP_003600411.1| glucose inhibited division protein GidB [Bacillus megaterium DSM
319]
gi|294804995|gb|ADF42061.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium DSM 319]
Length = 238
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L ++S + L + E +Y + ++W++K+NL + + + + +H DS+
Sbjct: 1 MNIQQFQQLLEEKGISLSSKQLNQFEKYYQVLVEWNEKMNLTAITDHGEVYEKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
FQ D+G+G GFP I I + V +++S K+ +FL ++V +
Sbjct: 61 AAFFQDFTEIESMCDVGAGAGFPSIPIKICFPHL---HVTIVDSLQKRITFLTHLVNELE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + + D+++ARA+A + L E+ P + ++
Sbjct: 118 LDNVTLCHDRAETFGKKETIRESFDLVTARAVARISVLNEFCLPLVKEQ 166
>gi|218463269|ref|ZP_03503360.1| glucose-inhibited division protein B [Rhizobium etli Kim 5]
Length = 205
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 82/152 (53%), Positives = 112/152 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ++P P W
Sbjct: 3 LNGLRVSRETQARLQHFAALFQKWAKAINLVAPSTLDDLWRRHIADSSQIFQIYPEPVRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V A RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
I C ISARALADLD L+ Y+ PW+ K
Sbjct: 123 HAEIGECGAISARALADLDGLIGYAAPWMLGK 154
>gi|223983436|ref|ZP_03633622.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
gi|223964608|gb|EEF68934.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
Length = 233
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
S E+ + L +W++K+NL + + E+ +H DSL F P ++
Sbjct: 12 QKEIGCSARQQEQFVRYAQLLQEWNEKMNLTAITEWEEVLEKHFYDSLVPFAGMPLNTVH 71
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP + I ++ + ++E NK+ FL+ V ++ + R +
Sbjct: 72 LCDVGAGAGFPSLPLKIMNPQLK---ITILEPLNKRVVFLKEVCRELQLDNVECLNVRAE 128
Query: 134 EA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + + D+++ARA+A+L L E P + +
Sbjct: 129 DYAKEHRESFDLVTARAVANLRVLAELCLPLVKK 162
>gi|257088448|ref|ZP_05582809.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
gi|256997260|gb|EEU83780.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
Length = 238
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 4 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 64 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 120
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 121 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 166
>gi|323487694|ref|ZP_08092952.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
gi|323398428|gb|EGA91216.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
Length = 237
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYL-LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L ++ LE+ ++ ++W+ K+NL + + +++H D +
Sbjct: 1 MNEQQFKDALSEKGIVLTDTQLEQFRIYHKELVEWNDKMNLTAITEQTTVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I IE V +++S NK+ FL+++ +
Sbjct: 61 AAFYLDFTKPMNICDVGAGAGFPSIPLKICFPHIE---VTIVDSLNKRIQFLQHLSGELG 117
Query: 123 A-RGKVFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + R ++ Q + DV++ARA+A L L E P + +
Sbjct: 118 LTKVQFVHSRAEDFGQSSHRESYDVVTARAVARLSVLAELCVPLVKK 164
>gi|154688205|ref|YP_001423366.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens FZB42]
gi|166224573|sp|A7ZAV9|RSMG_BACA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154354056|gb|ABS76135.1| GidB [Bacillus amyloliquefaciens FZB42]
Length = 239
Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N ++ ++S LE+ E +Y + ++W++K+NL S + +D +++H D +
Sbjct: 1 MNIEEFISSLAEKGISLSDRQLEQFELYYRMLVEWNEKMNLTSITEKKDVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP + I + V +++S NK+ +FL +
Sbjct: 61 AAFYIDFEKVTTLCDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLETLSDALQ 117
Query: 123 AR----GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + + + D+++ARA+A L L E P +
Sbjct: 118 LEHTSFVHDRAETFGQRKDVRESFDLVTARAVARLSVLSELCLPLAKK 165
>gi|313904716|ref|ZP_07838090.1| methyltransferase GidB [Eubacterium cellulosolvens 6]
gi|313470509|gb|EFR65837.1| methyltransferase GidB [Eubacterium cellulosolvens 6]
Length = 240
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
SIL ++ ++ +Y + ++W+K +NL + + ++ +H D +L
Sbjct: 7 SILEDETAKLGLKLTDTQKKQFIRYYEMLVEWNKVMNLTAITEYDEVISKHFVDSLTLAR 66
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
ID+G+G GFPG+ +I ++ V L++S K+ FL V+
Sbjct: 67 DINFDNVGNLIDVGTGAGFPGLPLAIAYPNVR---VTLVDSLMKRVKFLNEVIGALGLTN 123
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ F R +EA + D++ +RA+A+L TLLEY P+ +
Sbjct: 124 VEAFHSRAEEAGHNRKFRGQYDLVVSRAVANLSTLLEYCTPFAKK 168
>gi|293553539|ref|ZP_06674166.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E1039]
gi|291602294|gb|EFF32519.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E1039]
Length = 269
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
R + ++ + + +Y ++W++K+NL + + +D +++H D +L
Sbjct: 4 EEFRQSLAEKGIELTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P D+GSG GFP I I ++ + +++S NK+ +FL + +
Sbjct: 64 EVDFTQPFSLCDVGSGAGFPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDA 120
Query: 126 KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + P + D+++ARA+A L+ L E P Q+
Sbjct: 121 SLYHDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|330685280|gb|EGG96941.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU121]
Length = 239
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L N +S E+ + +Y L ++W++K+NL S + + +++H DS+ +
Sbjct: 6 LSEKLKENNIELSNTQKEQFQTYYQLLVEWNEKMNLTSITDEHEVYLKHFYDSITPSFYY 65
Query: 70 PYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++
Sbjct: 66 DFKGSLSICDVGAGAGFPSIPLKIIFPELK---VTIVDSLNKRIQFLNHLADALGLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAETFGKGDYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|313640182|gb|EFS04772.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL S4-171]
Length = 238
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N +N L +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFSNALAEKGIELSEVQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I +E V++++ K+ +FL + +K A
Sbjct: 61 AAFYVDFNDFHSICDVGAGAGFPSIPIKICFPHLE---VSIVDXXXKRMTFLDALAEKLA 117
Query: 123 A-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + + D+++ARA+A + L E P + +
Sbjct: 118 LTNVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCLPLVKK 165
>gi|138897065|ref|YP_001127518.1| 16S rRNA methyltransferase GidB [Geobacillus thermodenitrificans
NG80-2]
gi|196249886|ref|ZP_03148582.1| methyltransferase GidB [Geobacillus sp. G11MC16]
gi|166224591|sp|A4ITW9|RSMG_GEOTN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134268578|gb|ABO68773.1| Glucose inhibited division protein B [Geobacillus
thermodenitrificans NG80-2]
gi|196210762|gb|EDY05525.1| methyltransferase GidB [Geobacillus sp. G11MC16]
Length = 238
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++S + L + E +Y L ++W++K+NL + + +++H DS+ + + +
Sbjct: 14 GISLSSQALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVSPAFYYDFSEPFSL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR----GKVFACR 131
D+G+G GFP I I + V++++S K+ FL+++V + + A
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLR---VSIVDSLQKRIRFLQHLVGELGLKDIALYHDRAET 130
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
M + DV++ARA+A + L E P
Sbjct: 131 FARQKGMRESFDVVTARAVARMPVLAELCLPLTK 164
>gi|255067498|ref|ZP_05319353.1| 16S rRNA methyltransferase GidB [Neisseria sicca ATCC 29256]
gi|255048293|gb|EET43757.1| 16S rRNA methyltransferase GidB [Neisseria sicca ATCC 29256]
Length = 207
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L++ ++S E L + L KW+K NL + H+ DSL +
Sbjct: 7 LQSGIQALGLDLSAEQQTLLLAYTGLLKKWNKTYNLTALRDEAQMVSHHLLDSLTLLPYL 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI +I + + L+++ KK +FL+ V + +V
Sbjct: 67 QGAHTMLDVGSGGGQPGIPAAICRPDLN---ITLLDANTKKTAFLQQAVIELGLSNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + D+I++RA A+L + ++ L
Sbjct: 124 SGRVEAVQDL--QADIITSRAFAELADFVNWTAHLLKD 159
>gi|218283288|ref|ZP_03489343.1| hypothetical protein EUBIFOR_01932 [Eubacterium biforme DSM 3989]
gi|218215978|gb|EEC89516.1| hypothetical protein EUBIFOR_01932 [Eubacterium biforme DSM 3989]
Length = 233
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ L ++ E + + E + L ++W++K+NL + + E+ W +H DS+ F
Sbjct: 6 FQKACLEAGIQLNEEQMNRFEKYMQLLIEWNEKMNLTAITQEEEVWEKHFYDSIMPFSNI 65
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ D+GSG GFPGI I + L+E K+ FL V +
Sbjct: 66 DFE-TMCDIGSGAGFPGIPVKIAFP---HVHMTLVEPLQKRCRFLNEVKTQLNLENLDIL 121
Query: 130 CRIQE--APQMITTCDVISARALADLDTLLEYSFPWLY 165
E A + DV+SARA+A L LLE P++
Sbjct: 122 NVRAEDLAKEKRECFDVVSARAVAKLSILLELCVPFVK 159
>gi|69247496|ref|ZP_00604366.1| Glucose inhibited division protein [Enterococcus faecium DO]
gi|257878638|ref|ZP_05658291.1| glucose inhibited division protein [Enterococcus faecium 1,230,933]
gi|257881304|ref|ZP_05660957.1| glucose inhibited division protein [Enterococcus faecium 1,231,502]
gi|257885579|ref|ZP_05665232.1| glucose inhibited division protein [Enterococcus faecium 1,231,501]
gi|257890521|ref|ZP_05670174.1| glucose inhibited division protein [Enterococcus faecium 1,231,410]
gi|257893097|ref|ZP_05672750.1| glucose inhibited division protein [Enterococcus faecium 1,231,408]
gi|258615278|ref|ZP_05713048.1| 16S rRNA methyltransferase GidB [Enterococcus faecium DO]
gi|289567292|ref|ZP_06447671.1| 16S rRNA methyltransferase GidB [Enterococcus faecium D344SRF]
gi|293563243|ref|ZP_06677695.1| methyltransferase GidB [Enterococcus faecium E1162]
gi|293569167|ref|ZP_06680473.1| methyltransferase GidB [Enterococcus faecium E1071]
gi|294616667|ref|ZP_06696438.1| methyltransferase GidB [Enterococcus faecium E1636]
gi|294619737|ref|ZP_06699142.1| methyltransferase GidB [Enterococcus faecium E1679]
gi|294623751|ref|ZP_06702579.1| methyltransferase GidB [Enterococcus faecium U0317]
gi|68194821|gb|EAN09296.1| Glucose inhibited division protein [Enterococcus faecium DO]
gi|257812866|gb|EEV41624.1| glucose inhibited division protein [Enterococcus faecium 1,230,933]
gi|257816962|gb|EEV44290.1| glucose inhibited division protein [Enterococcus faecium 1,231,502]
gi|257821435|gb|EEV48565.1| glucose inhibited division protein [Enterococcus faecium 1,231,501]
gi|257826881|gb|EEV53507.1| glucose inhibited division protein [Enterococcus faecium 1,231,410]
gi|257829476|gb|EEV56083.1| glucose inhibited division protein [Enterococcus faecium 1,231,408]
gi|289160911|gb|EFD08832.1| 16S rRNA methyltransferase GidB [Enterococcus faecium D344SRF]
gi|291588136|gb|EFF19978.1| methyltransferase GidB [Enterococcus faecium E1071]
gi|291590487|gb|EFF22225.1| methyltransferase GidB [Enterococcus faecium E1636]
gi|291594007|gb|EFF25476.1| methyltransferase GidB [Enterococcus faecium E1679]
gi|291596705|gb|EFF27928.1| methyltransferase GidB [Enterococcus faecium U0317]
gi|291604782|gb|EFF34264.1| methyltransferase GidB [Enterococcus faecium E1162]
Length = 237
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
R + ++ + + +Y ++W++K+NL + + +D +++H D +L
Sbjct: 4 EEFRQSLAEKGIELTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P D+GSG GFP I I ++ + +++S NK+ +FL + +
Sbjct: 64 EVDFTQPLSLCDVGSGAGFPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDA 120
Query: 126 KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + P + D+++ARA+A L+ L E P Q+
Sbjct: 121 SLYHDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|319651093|ref|ZP_08005227.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
gi|317397263|gb|EFV77967.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
Length = 238
Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N +S + L++ + +Y ++W++K+NL + + ED +++H DS+
Sbjct: 1 MNTEQFTEMLAAKGIALSPQQLQQYDTYYSTLVEWNEKMNLTAITEKEDVYLKHFYDSIS 60
Query: 65 VFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I + + +++S NK+ FL ++ +K
Sbjct: 61 AAFYFDFNQPLKVCDVGAGAGFPSIPIKIAFPGL---HITIVDSLNKRIGFLEHLAKKLE 117
Query: 123 A-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R + + + + DV++ARA+A L L E P
Sbjct: 118 LDNVRFIHDRAETFGQNKEYRESFDVVTARAVARLSVLSELCLPLAK 164
>gi|329724143|gb|EGG60661.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU144]
Length = 239
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
+S E+ + +Y L ++W+KK+NL S + D +++H DS+ + +
Sbjct: 14 GIELSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIAPSFYYDFNGQLSL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 74 CDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAET 130
Query: 135 APQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A L L E P + +
Sbjct: 131 YGKGVYRESYDIVTARAVARLTVLSELCLPLVNK 164
>gi|320527144|ref|ZP_08028331.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
gi|320132472|gb|EFW25015.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
Length = 232
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S +++LE + L ++W++K+NL + + + +H DS+ D
Sbjct: 14 QISLSETQVKQLEQYAQLLVEWNEKMNLTAITEHGEILEKHFYDSILPLGKGKIFGKIAD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-A 135
+G+G GFPG++ I ++ V+LIE K+ +FL+ V+ + V+ R +E
Sbjct: 74 VGTGAGFPGLVWKIVKPELD---VSLIEPTGKRCTFLQEVMNQLHLENIHVYNTRAEEQV 130
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
DV++ARA+A+L L E P +
Sbjct: 131 KTDREQYDVVTARAVANLRVLSELCIPLVK 160
>gi|298695966|gb|ADI99188.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus ED133]
Length = 239
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ + +Y L ++W++K+NL S + + +++H DS+ +
Sbjct: 13 HNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHNVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|126651988|ref|ZP_01724180.1| glucose-inhibited division protein B [Bacillus sp. B14905]
gi|126591257|gb|EAZ85366.1| glucose-inhibited division protein B [Bacillus sp. B14905]
Length = 238
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 6 SNSI-LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL- 63
N +S + + + + ++ L ++W++K+NL + + +E +++H DS+
Sbjct: 1 MNEQQFIEALKKKGIELSEKQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSIS 60
Query: 64 -RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I + V +++S NK+ +FL ++ +
Sbjct: 61 ASFYFDFSKVITVCDVGAGAGFPSIPIKICFPHL---HVTIVDSLNKRITFLNHLSDELQ 117
Query: 123 A-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E Q DV++ARA+A L L E P Q
Sbjct: 118 LENMNFVHARAEEFGQNLKYREQYDVVTARAVARLSVLSELCVPLAKQ 165
>gi|224498352|ref|ZP_03666701.1| glucose-inhibited division protein B [Listeria monocytogenes
Finland 1988]
Length = 238
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSI 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFES 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP + I ++ V++++S K+ +FL + +K + R +
Sbjct: 73 ICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVYFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A + L E P + +
Sbjct: 130 TFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|49484905|ref|YP_042129.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA252]
gi|221141511|ref|ZP_03566004.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|257424192|ref|ZP_05600621.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257426869|ref|ZP_05603271.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257432152|ref|ZP_05608515.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257435113|ref|ZP_05611164.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|282907043|ref|ZP_06314891.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282910022|ref|ZP_06317830.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282912910|ref|ZP_06320702.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282922538|ref|ZP_06330228.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|283959480|ref|ZP_06376921.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293497963|ref|ZP_06665817.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511553|ref|ZP_06670247.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|293550162|ref|ZP_06672834.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|295429293|ref|ZP_06821915.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589205|ref|ZP_06947846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|304379944|ref|ZP_07362673.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|55976401|sp|Q6GD94|RSMG_STAAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49243034|emb|CAG41768.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257273210|gb|EEV05312.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257276500|gb|EEV07951.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257283031|gb|EEV13163.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257285709|gb|EEV15825.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|269942296|emb|CBI50711.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus TW20]
gi|282314759|gb|EFB45145.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|282323010|gb|EFB53329.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282326088|gb|EFB56393.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282329942|gb|EFB59463.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|283789072|gb|EFC27899.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919209|gb|EFD96285.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|291096894|gb|EFE27152.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465511|gb|EFF08043.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|295127052|gb|EFG56696.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577716|gb|EFH96429.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|302752587|gb|ADL66764.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304341524|gb|EFM07434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315195222|gb|EFU25610.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS00]
gi|329315430|gb|AEB89843.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus T0131]
Length = 239
Score = 117 bits (292), Expect = 6e-25, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL Y+ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNYLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|160932437|ref|ZP_02079827.1| hypothetical protein CLOLEP_01272 [Clostridium leptum DSM 753]
gi|156868396|gb|EDO61768.1| hypothetical protein CLOLEP_01272 [Clostridium leptum DSM 753]
Length = 236
Score = 117 bits (292), Expect = 6e-25, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDL 78
+S E L++ + + L L+W+KK+NL + E+ I+H DSL F P + ID+
Sbjct: 18 LSPEQLDQFDGYCRLLLEWNKKMNLTAIREPEEVLIKHFVDSLALLGFAELPQGAKLIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE---A 135
G+G GFPG+ I + + L++S K+ +FL+ V + R ++
Sbjct: 78 GTGAGFPGLPLKIARPDLR---LALLDSLKKRLTFLQAVCGTLGLDADIIHSRAEDGGKL 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA+A L+ L EY P++
Sbjct: 135 SGLRQNFDAAVSRAVAPLNLLAEYCLPFVR 164
>gi|254670411|emb|CBA05972.1| glucose inhibited division protein B [Neisseria meningitidis
alpha153]
Length = 207
Score = 117 bits (292), Expect = 6e-25, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L++ ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LQSGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|227498806|ref|ZP_03928946.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
gi|226904258|gb|EEH90176.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
Length = 239
Score = 117 bits (292), Expect = 6e-25, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ + +S E L + E + L+ ++ +NL + + E+ ++H+ DSL ++
Sbjct: 2 ETLKQSAEAIGLTLSDEALRRFEIYKDELLETNRFLNLTAITDPEEVAVKHMVDSLTIYN 61
Query: 68 -LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ D+G+G GFPG+ I ++ + LI+S K+ +FL V + +
Sbjct: 62 EKRFHNRTIADVGTGAGFPGLPLKIYDPTMR---LTLIDSLAKRLAFLEKVAKDMGLGQI 118
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +EA P++ DV+ ARA+A + L EY P +
Sbjct: 119 RCHHARAEEAGRDPKLREKFDVVVARAVAPMPVLAEYCLPLVR 161
>gi|282902627|ref|ZP_06310520.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|282918064|ref|ZP_06325814.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282921286|ref|ZP_06329004.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|283767786|ref|ZP_06340701.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
gi|282315701|gb|EFB46085.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|282318349|gb|EFB48709.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282597086|gb|EFC02045.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|283461665|gb|EFC08749.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
Length = 239
Score = 117 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ + + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIELTETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|260558219|ref|ZP_05830415.1| glucose inhibited division protein [Enterococcus faecium C68]
gi|261206909|ref|ZP_05921598.1| glucose inhibited division protein [Enterococcus faecium TC 6]
gi|314940139|ref|ZP_07847319.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a04]
gi|314943030|ref|ZP_07849834.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133C]
gi|314948148|ref|ZP_07851544.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0082]
gi|314953438|ref|ZP_07856356.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133A]
gi|314993823|ref|ZP_07859159.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133B]
gi|314998152|ref|ZP_07863034.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a01]
gi|260075393|gb|EEW63699.1| glucose inhibited division protein [Enterococcus faecium C68]
gi|260078537|gb|EEW66239.1| glucose inhibited division protein [Enterococcus faecium TC 6]
gi|313587864|gb|EFR66709.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a01]
gi|313591714|gb|EFR70559.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133B]
gi|313594541|gb|EFR73386.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133A]
gi|313598230|gb|EFR77075.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133C]
gi|313640644|gb|EFS05224.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a04]
gi|313645402|gb|EFS09982.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0082]
Length = 242
Score = 117 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
R + ++ + + +Y ++W++K+NL + + +D +++H D +L
Sbjct: 9 EEFRQSLAEKGIELTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAF 68
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P D+GSG GFP I I ++ + +++S NK+ +FL + +
Sbjct: 69 EVDFTQPLSLCDVGSGAGFPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDA 125
Query: 126 KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + P + D+++ARA+A L+ L E P Q+
Sbjct: 126 SLYHDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQE 170
>gi|253733843|ref|ZP_04868008.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
gi|253728146|gb|EES96875.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
Length = 239
Score = 117 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIQLTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDISFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|169830195|ref|YP_001700353.1| methyltransferase gidB [Lysinibacillus sphaericus C3-41]
gi|238688171|sp|B1HPM1|RSMG_LYSSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168994683|gb|ACA42223.1| Methyltransferase gidB [Lysinibacillus sphaericus C3-41]
Length = 238
Score = 117 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 6 SNSI-LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL- 63
N +S + + + + ++ L ++W++K+NL + + +E +++H DS+
Sbjct: 1 MNEQQFIEALKKKGIELSEKQITQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSIS 60
Query: 64 -RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I + V +++S NK+ +FL ++ +
Sbjct: 61 ASFYFDFSKVITVCDVGAGAGFPSIPIKICFPHL---HVTIVDSLNKRITFLNHLSDELQ 117
Query: 123 A-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E Q DV++ARA+A L L E P Q
Sbjct: 118 LENMNFVHARAEEFGQNIKYREQYDVVTARAVARLSVLSELCVPLAKQ 165
>gi|82752288|ref|YP_418029.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus RF122]
gi|123549494|sp|Q2YZC0|RSMG_STAAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82657819|emb|CAI82274.1| glucose inhibited division protein B [Staphylococcus aureus RF122]
Length = 239
Score = 117 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIELTETQKQQFQTYYCLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|239828705|ref|YP_002951329.1| 16S rRNA methyltransferase GidB [Geobacillus sp. WCH70]
gi|259495497|sp|C5D9Y5|RSMG_GEOSW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|239808998|gb|ACS26063.1| methyltransferase GidB [Geobacillus sp. WCH70]
Length = 238
Score = 117 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
++S + L + E +Y L ++W++K+NL + + +++H DSL + +
Sbjct: 13 KGISLSSQALAQFERYYELLMEWNEKMNLTAITDKPSVYLKHFFDSLSPAFYYDFSQSLS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----AC 130
D+G+G GFP + I ++ +++++S K+ +FL ++ + F A
Sbjct: 73 ICDVGAGAGFPSVPLKICFPHLK---LSIVDSLQKRITFLEHLAAELGLTDVAFYHDRAE 129
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+++ARA+A + L E P +
Sbjct: 130 TFGRKKEFRESFDIVTARAVARMSVLSELCLPLVK 164
>gi|228994201|ref|ZP_04154101.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
gi|228765653|gb|EEM14307.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
Length = 239
Score = 117 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
N+S LE+ + ++ ++W++K+NL + + E+ +++H D + + P
Sbjct: 14 GINLSPRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYNDFSKPFSI 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F E
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAET 130
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 131 FGKKEGVRESFDIVMARAVARLSVLSELCLPLVK 164
>gi|218682745|ref|ZP_03530346.1| glucose-inhibited division protein B [Rhizobium etli CIAT 894]
Length = 205
Score = 117 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 82/149 (55%), Positives = 112/149 (75%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV++ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQERLQHFAALFQKWAKTINLVAASTLDDLWHRHIADSSQIFQIQPQPITW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T AR V A RI++A
Sbjct: 63 VDLGSGGGFPGVITAIYLAELQDGWVHLVESNHKKAAFLRTALRETNARASVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P I CD ISARALA+LD L+ YS W+
Sbjct: 123 PTEIGECDAISARALAELDGLIGYSAAWM 151
>gi|315174217|gb|EFU18234.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1346]
Length = 300
Score = 117 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 66 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 125
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 126 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 182
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 183 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 228
>gi|283471924|emb|CAQ51135.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ST398]
Length = 239
Score = 117 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ + + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIELTETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|315660000|ref|ZP_07912858.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
gi|315494901|gb|EFU83238.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
Length = 240
Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 6 SNSI--LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N++ L + ++ + + + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 1 MNAVKWLTEKLKEHDIVLTEKQQAQFQTYYQLLVEWNEKMNLTSITDEHDVYLKHFYDSI 60
Query: 64 RVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
H + D+G+G GFP I I +++ V +++S NK+ FL ++ +
Sbjct: 61 TPSFYHDFNQPLTVCDVGAGAGFPSIPLKIVYPALK---VTIVDSLNKRIQFLNHLASEL 117
Query: 122 AA-RGKVFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 118 ELQDVSFIHDRAETFGKGVYRESYDIVTARAVARLTVLSELCLPLVKK 165
>gi|27469333|ref|NP_765970.1| glucose-inhibited division protein B [Staphylococcus epidermidis
ATCC 12228]
gi|251811359|ref|ZP_04825832.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|282874716|ref|ZP_06283595.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|29336633|sp|Q8CMN7|RSMG_STAES RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27316883|gb|AAO06058.1|AE016752_91 glucose inhibited division protein B [Staphylococcus epidermidis
ATCC 12228]
gi|251805108|gb|EES57765.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296432|gb|EFA88947.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|329735756|gb|EGG72037.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU028]
Length = 239
Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
+S E+ + +Y L ++W+KK+NL S + D +++H DS+ + +
Sbjct: 14 GIELSNTQKEQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIAPSFYYDFNGQLSL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 74 CDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAET 130
Query: 135 APQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A L L E P + +
Sbjct: 131 YGKGVYRESYDIVTARAVARLTVLSELCLPLVNK 164
>gi|149182299|ref|ZP_01860778.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
gi|148849991|gb|EDL64162.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
Length = 238
Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 6 SNSI-LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N N++ + L + +Y ++W+ K+NL + + E+ +++H D +
Sbjct: 1 MNITQFTEKLSEKGINLTSKQLAQFAEYYETLVEWNNKMNLTAITDKEEVYLKHFYDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I IE V++++S NK+ +FL ++ K
Sbjct: 61 AAFYLDFNREIRVCDVGAGAGFPSIPLKICFPQIE---VSIVDSLNKRITFLNHLSDKLG 117
Query: 123 ARGKVF----ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G F A P+ D+++ARA+A + L E P +
Sbjct: 118 LEGTHFYHDRAETFARNPEHREQYDLVTARAVARMSVLSELCLPLVKN 165
>gi|86136758|ref|ZP_01055336.1| glucose-inhibited division protein B [Roseobacter sp. MED193]
gi|85826082|gb|EAQ46279.1| glucose-inhibited division protein B [Roseobacter sp. MED193]
Length = 206
Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats.
Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ LL NVSRET+E+LE F + LKW+ +INLVS ++++D W RH+ DS++VF
Sbjct: 1 MSDRALLEQLNVSRETIERLEKFEEVLLKWNPRINLVSKNSLQDLWNRHIVDSVQVFTCV 60
Query: 70 PY-PSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
W+D+GSGGGFPGI+ +I + V LIES +K++FLR ++ V
Sbjct: 61 EDLGVSWVDIGSGGGFPGIVVAIMAAEHAPKTKVTLIESDQRKSAFLRTAARECGVPVTV 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+EA DV+SARA+ADLD LL +S L +
Sbjct: 121 LNQRIEEADPQ--NADVLSARAVADLDALLYFSERHLAK 157
>gi|242372607|ref|ZP_04818181.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
gi|242349662|gb|EES41263.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
Length = 239
Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SI 74
+ +S+ E+ + +Y L ++W++K+NL S + D +++H DS+ + +
Sbjct: 13 HGIELSQTQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFYDSITPSFYYDFDGDKS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAAELGLQDVSFVHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A L L E P + +
Sbjct: 130 SYGKGDYRESYDIVTARAVARLTVLSELCLPIVKK 164
>gi|261420900|ref|YP_003254582.1| 16S rRNA methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|319768571|ref|YP_004134072.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
gi|261377357|gb|ACX80100.1| methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|317113437|gb|ADU95929.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
Length = 238
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
+S L + E +Y L ++W++K+NL + + +++H DS+ + + + D+
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKLGVYVKHFFDSVSPAFYYDFSAPLALCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ---E 134
GSG GFP + I + V++++S K+ FL +++ + ++ R +
Sbjct: 77 GSGAGFPSLPLKICFPHLR---VSIVDSLQKRIRFLEHLITELGLADVALYHERAETFAR 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
M + DV++ARA+A + L+E P +
Sbjct: 134 QKGMRESFDVVTARAVARMPVLVELCLPLVK 164
>gi|218767117|ref|YP_002341629.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis Z2491]
gi|20177904|sp|Q9JX38|RSMG_NEIMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|121051125|emb|CAM07396.1| glucose inhibited division protein B homolog [Neisseria
meningitidis Z2491]
Length = 207
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTAHLLKD 159
>gi|152977681|ref|YP_001377198.1| glucose-inhibited division protein B [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|189039481|sp|A7GVP5|RSMG_BACCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152026433|gb|ABS24203.1| methyltransferase GidB [Bacillus cytotoxicus NVH 391-98]
Length = 239
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
++S LE+ E ++ ++W++K+NL + + E+ +++H D + + P
Sbjct: 14 GISLSPRQLEQFEMYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSNPLSI 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F E
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAET 130
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 131 FGKKEHVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|154483915|ref|ZP_02026363.1| hypothetical protein EUBVEN_01621 [Eubacterium ventriosum ATCC
27560]
gi|149735406|gb|EDM51292.1| hypothetical protein EUBVEN_01621 [Eubacterium ventriosum ATCC
27560]
Length = 238
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D ++L ++ E +EK + +Y + ++ +K +NL S + ++ I+H DSL
Sbjct: 1 MDKENLLVKGLSELGLTITEEQIEKFDKYYEMLIETNKVMNLTSITEYDEVIIKHFIDSL 60
Query: 64 R--VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
ID+G+G GFPGI I ++ + L++S NK+ FL V+ +
Sbjct: 61 LVVNIFDINQSKKMIDVGTGAGFPGIPIKIMFPHLQ---ITLLDSLNKRLKFLNNVIDEL 117
Query: 122 AAR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ + D+ +RA+A+L TL EY P++ +
Sbjct: 118 GLESIETVHGRAEDIARKEEFREQYDLCVSRAVANLSTLSEYCIPFIAK 166
>gi|328958782|ref|YP_004376168.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
gi|328675106|gb|AEB31152.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
Length = 238
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L V+ + +E+ + + L +W+ KINL + + E+ +++H DS+
Sbjct: 1 MNPEEFKTALEDKGLVVTEKQMEQFDQYLKLLQEWNGKINLTAITQKEEVYLKHFYDSIT 60
Query: 65 ---VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
D+G+G GFP I I +E +V+ + + + + L ++
Sbjct: 61 AGLYVDFTKGVQSLCDVGAGAGFPSIPLKIIFPQLEVTIVDSLNKRIQFLTLLAQTLELD 120
Query: 122 AAR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + Q + D ++ARA+A + L E P + +
Sbjct: 121 GVHFYHDRAETFGQNKQFRESFDFVTARAVARMSVLSELCLPLVKK 166
>gi|289551829|ref|YP_003472733.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
gi|289181360|gb|ADC88605.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
Length = 240
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 6 SNSI--LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N++ L + ++ + + + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 1 MNAVKWLTEKLKEHDIVLTEKQQAQFQTYYQLLVEWNEKMNLTSITDEHDVYLKHFYDSI 60
Query: 64 RVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
H + D+G+G GFP I I +++ V +++S NK+ FL ++ +
Sbjct: 61 TPSFYHDFNQPLTVCDVGAGAGFPSIPLKIVYPALK---VTIVDSLNKRIQFLNHLASEL 117
Query: 122 AA-RGKVFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 118 ELQDVSFIHDRAETFGKGVYRESYDIVTARAVARLTVLSELCLPLVKK 165
>gi|315579758|gb|EFU91949.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0630]
Length = 275
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 66 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 125
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 126 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 182
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 183 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 228
>gi|326804298|ref|YP_004322116.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651693|gb|AEA01876.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 239
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N +A + +++ +++ E +Y L + W++KINL + + ++ +++H DSL
Sbjct: 1 MNPEEFKAALVEQGIDLTDLQMQQFESYYQLLVSWNEKINLTAITDRDEVYLKHFYDSLT 60
Query: 65 VFQ---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ +D+GSG GFP I I ++ V++++S NK+ F+ V ++
Sbjct: 61 LAFSLETDLTGKKLVDVGSGAGFPSIPLKIAFPQLQ---VSIVDSLNKRIKFIETVTEEL 117
Query: 122 AA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ D+ +ARA+A L L EY P + +
Sbjct: 118 GLAGVSAYHDRAEDFGQNKAFRGQFDLATARAVARLSVLSEYCLPLVKK 166
>gi|15925700|ref|NP_373234.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50]
gi|15928295|ref|NP_375828.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus N315]
gi|148269141|ref|YP_001248084.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH9]
gi|150395223|ref|YP_001317898.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH1]
gi|156981025|ref|YP_001443284.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu3]
gi|253316836|ref|ZP_04840049.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007481|ref|ZP_05146082.2| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793534|ref|ZP_05642513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|258411160|ref|ZP_05681439.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|258420936|ref|ZP_05683870.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|258438575|ref|ZP_05689798.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|258443969|ref|ZP_05692307.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|258446215|ref|ZP_05694375.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|258449126|ref|ZP_05697232.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|258454396|ref|ZP_05702364.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|269204347|ref|YP_003283616.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282894275|ref|ZP_06302505.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|282927746|ref|ZP_06335360.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|295406860|ref|ZP_06816664.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|296275691|ref|ZP_06858198.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MR1]
gi|297245895|ref|ZP_06929757.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|54037194|sp|P64240|RSMG_STAAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54041310|sp|P64239|RSMG_STAAM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224617|sp|A7X7A5|RSMG_STAA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040721|sp|A6U593|RSMG_STAA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040722|sp|A5IWD5|RSMG_STAA9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13702667|dbj|BAB43807.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus N315]
gi|14248485|dbj|BAB58872.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu50]
gi|147742210|gb|ABQ50508.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH9]
gi|149947675|gb|ABR53611.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH1]
gi|156723160|dbj|BAF79577.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu3]
gi|257787506|gb|EEV25846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|257840045|gb|EEV64510.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|257843126|gb|EEV67541.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|257848134|gb|EEV72126.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|257850853|gb|EEV74797.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|257855041|gb|EEV77984.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|257857559|gb|EEV80454.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|257863490|gb|EEV86250.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|262076637|gb|ACY12610.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282590506|gb|EFB95584.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|282763320|gb|EFC03450.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|285818373|gb|ADC38860.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus 04-02981]
gi|294968325|gb|EFG44350.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|297177260|gb|EFH36513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|312831048|emb|CBX35890.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129539|gb|EFT85531.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS03]
gi|329725897|gb|EGG62376.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21172]
Length = 239
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLIKK 164
>gi|254805766|ref|YP_003083987.1| glucose inhibited division protein B [Neisseria meningitidis
alpha14]
gi|254669308|emb|CBA08305.1| glucose inhibited division protein B [Neisseria meningitidis
alpha14]
gi|325129108|gb|EGC51957.1| methyltransferase GidB [Neisseria meningitidis N1568]
gi|325133104|gb|EGC55776.1| methyltransferase GidB [Neisseria meningitidis M6190]
gi|325137023|gb|EGC59619.1| methyltransferase GidB [Neisseria meningitidis M0579]
gi|325139082|gb|EGC61628.1| methyltransferase GidB [Neisseria meningitidis ES14902]
gi|325141204|gb|EGC63704.1| methyltransferase GidB [Neisseria meningitidis CU385]
gi|325197477|gb|ADY92933.1| methyltransferase GidB [Neisseria meningitidis G2136]
gi|325203311|gb|ADY98764.1| methyltransferase GidB [Neisseria meningitidis M01-240355]
Length = 207
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|294501985|ref|YP_003565685.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
gi|294351922|gb|ADE72251.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
Length = 238
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L ++S + L + E +Y + ++W++K+NL + + + + +H DS+
Sbjct: 1 MNIQQFQQLLEEKGISLSSKQLNQFEKYYQVLVEWNEKMNLTAITDHGEVYEKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
FQ D+G+G GFP I I + V +++S K+ +FL ++V +
Sbjct: 61 AAFFQDFTEIESMCDVGAGAGFPSIPIKICFPHL---HVTIVDSLQKRITFLMHLVNELE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + + D+++ARA+A + L E+ P + ++
Sbjct: 118 LDNVTLCHDRAETFGKKETIRESFDLVTARAVARISVLNEFCLPLVKER 166
>gi|225016768|ref|ZP_03705960.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
gi|224950436|gb|EEG31645.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
Length = 236
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 86/167 (51%), Gaps = 13/167 (7%)
Query: 9 ILRANYLLNTY-----NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++ ++L + ++++ L++ + + L ++W++KINL S + ++ I+H DSL
Sbjct: 1 MINKDFLQSALAKYEIDITQMQLDQFDLYAKLLVEWNEKINLTSITDPDEIVIKHFVDSL 60
Query: 64 RVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + P + ID+G+G GFP +I ++ + ++S NK+ FL+ V +
Sbjct: 61 LLLRAANLPQGASLIDVGTGAGFPSTPLAILRGDLQ---ITQLDSLNKRILFLQEVSDQL 117
Query: 122 AARGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K R +E + + D +ARA+A+L TL EY P++
Sbjct: 118 GLPIKTVHIRAEEGGKSAEFREKYDYATARAVANLQTLSEYCIPFVK 164
>gi|293374960|ref|ZP_06621256.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325844326|ref|ZP_08168102.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
gi|292646437|gb|EFF64451.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325489193|gb|EGC91575.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
Length = 237
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++ E +L ++ L ++W++K+NL + V + +++H DSL F +
Sbjct: 14 GIELTEEQKWQLHRYFELLVEWNEKMNLTGITEVNEVYLKHFYDSLLAFLMFKDIHKCES 73
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+GSG GFP + I ++ +L++S K+ +FL +V+ +T K + R +
Sbjct: 74 LCDVGSGAGFPALPVKIVYPHLKM---DLVDSLGKRVNFLNHVIAETKLQNIKAYHSRAE 130
Query: 134 EA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + + D+++ARA+A L+ L E P + +
Sbjct: 131 EYADKHRESFDIVTARAVARLNVLSELCVPLVKE 164
>gi|293399789|ref|ZP_06643935.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306189|gb|EFE47432.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 236
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ L++ + + L+W++K+NL + + +++ + +H DS+ + D
Sbjct: 18 GITLQDTQLQQFAMYAAMLLEWNQKMNLTAITDMDEIYEKHFLDSILPSFDVKLKGTFCD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACRIQEA 135
+G+G GFP I I +E + ++E+ K+ +FL + + V A A
Sbjct: 78 VGAGAGFPSIPLKIVYPDLE---ITIVETLGKRITFLEALCHQLKLNNVHCVHARAEDYA 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++SARA+A+L L E P +
Sbjct: 135 KEHRESFDIVSARAVANLTMLSELCIPLVK 164
>gi|317131000|ref|YP_004097282.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
gi|315475948|gb|ADU32551.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
Length = 237
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N N LL +++ + L++ +Y L ++W++K+NL + + ED +++H D S
Sbjct: 1 MNEEQFLNALLERGIHLNTDQLKQFHDYYELLVEWNEKMNLTAITDKEDVYLKHFFDSVS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+G+G GFP I I ++ V +++S NK+ +FL + +K +
Sbjct: 61 VSFYHDFKEQKSIVDVGAGAGFPSIPLKICYPHLK---VTIVDSLNKRITFLNALAEKLS 117
Query: 123 AR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + R ++ + T D ARA+A L L E P + Q
Sbjct: 118 LKEVSFYHDRAEDFGKKKEHRETYDTALARAVARLPVLAELCMPLVKQ 165
>gi|49474827|ref|YP_032869.1| glucose-inhibited division protein B [Bartonella quintana str.
Toulouse]
gi|55976397|sp|Q6FYC0|RSMG_BARQU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49240331|emb|CAF26813.1| Glucose inhibited division protein b [Bartonella quintana str.
Toulouse]
Length = 215
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 71/165 (43%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 6 SN-SILRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
N SI + L VS ET+ L F L L+W+ INL+S++T+ WIRH+ DS
Sbjct: 1 MNVSIEQKYQALLNIVPFVSHETMNDLIQFESLILQWNAHINLISAATIPVLWIRHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+++ LH W DLGSGGGFP I+ +I L + + G ++L+ES KK +FLR V+ +
Sbjct: 61 AQIYPLHSNFLHWCDLGSGGGFPAIVIAIFLKTKKAGHIDLVESNGKKIAFLRTVISQLN 120
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V CRI++ Q I DVI+AR LA LD LL+ FP L QK
Sbjct: 121 LPATVHHCRIEDVYQKIKKPDVITARGLACLDELLQLIFPLLTQK 165
>gi|312902981|ref|ZP_07762170.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|310633649|gb|EFQ16932.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|315163401|gb|EFU07418.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0645]
Length = 300
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 66 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 125
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 126 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 182
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 183 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 228
>gi|222150244|ref|YP_002551201.1| 16S rRNA methyltransferase GidB [Agrobacterium vitis S4]
gi|254766872|sp|B9JV51|RSMG_AGRVS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221737226|gb|ACM38189.1| glucose inhibited division protein [Agrobacterium vitis S4]
Length = 211
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 87/153 (56%), Positives = 109/153 (71%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET EKL++F LF KWSK INLV++ST + W RHV DS ++F+L P P W
Sbjct: 9 LTGLRVSRETYEKLDHFVDLFGKWSKVINLVANSTKDQIWHRHVIDSAQLFKLRPNPQHW 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
IDLGSGGGFPG+IT+I LS G V+L+ES NKKA+FLR + +T ARG+V RI+EA
Sbjct: 69 IDLGSGGGFPGVITAILLSEKSDGWVDLVESNNKKAAFLRTALMETGARGRVHPVRIEEA 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ ++ CD ISARALADLD L Y+ PW + K
Sbjct: 129 HKSLSDCDTISARALADLDLLFSYASPWAEKNK 161
>gi|125623940|ref|YP_001032423.1| glucose-inhibited division protein B [Lactococcus lactis subsp.
cremoris MG1363]
gi|166224595|sp|A2RK93|RSMG_LACLM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|124492748|emb|CAL97703.1| glucose-inhibited division protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070714|gb|ADJ60114.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 238
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSI 74
+S + +E+ E ++ L ++W++KINL + + + +++H DS+ P
Sbjct: 14 DIKLSDKQIEQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSVAPILYGLITDQPVS 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+D+G+G GFP + I +E V +I+S NK+ +FL + ++ + R +
Sbjct: 74 ILDIGAGAGFPSLPMKIIFPELE---VTIIDSLNKRINFLSLLTEELGLENVTLLHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T D ++ARA+A L L E++ P+L +
Sbjct: 131 DFGQDSNYRATFDFVTARAVARLSVLSEFTIPFLKK 166
>gi|316985715|gb|EFV64661.1| methyltransferase GidB [Neisseria meningitidis H44/76]
Length = 266
Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 8/165 (4%)
Query: 5 DSN--SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D LRA ++S ++L + L KW+K NL + E + H+ DS
Sbjct: 59 DMERKERLRAGIAAMGLDISETAQDRLLVYVDLLKKWNKTYNLTALRDEEKMIVHHLLDS 118
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 119 LTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELG 175
Query: 123 A-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 176 LDNVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 218
>gi|224823522|ref|ZP_03696631.1| methyltransferase GidB [Lutiella nitroferrum 2002]
gi|224603977|gb|EEG10151.1| methyltransferase GidB [Lutiella nitroferrum 2002]
Length = 208
Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++++E + +LE + L KW++ NL + E H+ DSL + + +D
Sbjct: 15 KLDLTQEQIARLESYLALLAKWNQTYNLTAVREEERMVSYHLLDSLTLVPQLAGGTRLLD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I ++ V L++S +KK +FLR V + EA Q
Sbjct: 75 VGSGGGMPGIPAAIARPDLQ---VVLLDSNHKKTTFLRQAVIELKLDNVEVVTNRVEAYQ 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
D I++RA A+L ++ + L
Sbjct: 132 PEQKFDRITSRAFAELAEFVKLTRHLLAP 160
>gi|261400115|ref|ZP_05986240.1| 16S rRNA methyltransferase GidB [Neisseria lactamica ATCC 23970]
gi|269210347|gb|EEZ76802.1| 16S rRNA methyltransferase GidB [Neisseria lactamica ATCC 23970]
Length = 207
Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|282912270|ref|ZP_06320066.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282323966|gb|EFB54282.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|312436863|gb|ADQ75934.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH60]
Length = 239
Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL Y+ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNYLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV+ ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVIARAVARLSVLSELCLPLVKK 164
>gi|170016607|ref|YP_001727526.1| methyltransferase GidB [Leuconostoc citreum KM20]
gi|193806446|sp|B1MX30|RSMG_LEUCK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169803464|gb|ACA82082.1| Methyltransferase GidB [Leuconostoc citreum KM20]
Length = 239
Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPS 73
++ + +E+ + ++ L ++ +K+ NL + + +D +++H DSL V S
Sbjct: 14 GITLTEQQIEQFQRYFELLVEANKQFNLTAITDEKDVYLKHFYDSLTVAIYVKALQHQSS 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
ID+G+G GFP + I ++ + ++++ K+ FL+ VV + R
Sbjct: 74 TLIDVGTGAGFPSLPLKIAFPQLK---ITMVDALQKRVRFLQDVVDTLDLKNVSIVHGRA 130
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D +ARALA L EY+ P++
Sbjct: 131 EDIGQNVAYREQFDFATARALARTSVLAEYTLPFVK 166
>gi|325294200|ref|YP_004280064.1| 16S rRNA methyltransferase GidB [Agrobacterium sp. H13-3]
gi|325062053|gb|ADY65744.1| 16S rRNA methyltransferase GidB [Agrobacterium sp. H13-3]
Length = 205
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 81/148 (54%), Positives = 109/148 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+N +VSRET E+LE+F LF KW+K NLV+ ST+ + W RHV DS ++FQL P P W
Sbjct: 3 INGQSVSRETQERLEHFVELFKKWNKTTNLVAPSTLTELWSRHVADSAQIFQLAPQPQKW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
IDLGSGGGFPG+IT+I L+ + G V+L+ES NKK +FLR +++T ARG V + RI++A
Sbjct: 63 IDLGSGGGFPGVITAIFLAELGDGWVDLVESNNKKPAFLRIALKETGARGAVHSVRIEKA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
P+ + CD ISARALA+++ L EY PW
Sbjct: 123 PETVENCDAISARALAEMNLLFEYIHPW 150
>gi|256618560|ref|ZP_05475406.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|257087803|ref|ZP_05582164.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300861419|ref|ZP_07107503.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
gi|256598087|gb|EEU17263.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|256995833|gb|EEU83135.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300848880|gb|EFK76633.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
Length = 238
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 4 EEFRQLLAEKGIELTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 64 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 120
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 121 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 166
>gi|257429505|ref|ZP_05605892.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
gi|257279986|gb|EEV10573.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
Length = 239
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 13 HNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK FL Y+ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKCIQFLNYLASELQLQDVSFIHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|227893998|ref|ZP_04011803.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
gi|227864199|gb|EEJ71620.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
Length = 240
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + ++ + ++ L ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPEKFVLELSKHNFKLTDKQKQQFKLYFKLLVEVNEHVNLTRITEEDEVYLKHFYDSVT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I +++ V +++S K+ +FL+ ++ +
Sbjct: 61 PLFTFGEVFKDGATLCDVGAGAGFPSIPLKILKPTLK---VTIVDSLQKRLNFLKDLIAQ 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R ++ Q D+++ARA+A + L EY P + ++
Sbjct: 118 LGLTDVELVHGRAEDVGQNKLYREKFDIVTARAVARMSVLSEYCLPLVKKE 168
>gi|257871375|ref|ZP_05651028.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
gi|257805539|gb|EEV34361.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
Length = 237
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 81/164 (49%), Gaps = 8/164 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + +S E L++ +Y ++W++K+NL + + ++ +++H DS+ +
Sbjct: 4 EEFQKQLSIQGIELSSEQLKQFATYYDRLIEWNQKMNLTAITDQKEVYLKHFYDSISLAF 63
Query: 68 LHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR- 124
+ + D+GSG GFP I I ++ + +++S NK+ +FL+ +V +
Sbjct: 64 VTAFKEDAHLCDVGSGAGFPSIPLKIIFPQLK---ITIVDSLNKRITFLQTLVADLGLKD 120
Query: 125 GKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+F R + + + D ++ARA+A L+ L E P + +
Sbjct: 121 VYLFHDRAETFGQKEFRESFDYVTARAVARLNILTELCLPLVKK 164
>gi|226326136|ref|ZP_03801654.1| hypothetical protein COPCOM_03955 [Coprococcus comes ATCC 27758]
gi|225205678|gb|EEG88032.1| hypothetical protein COPCOM_03955 [Coprococcus comes ATCC 27758]
Length = 238
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ +++ + + +Y + ++W+K +NL + E+ +H DSL +
Sbjct: 1 MSKKFEQQLAELGITLTQTQFNQFDKYYEMLVEWNKVMNLTGITEYEEVNEKHFVDSLAL 60
Query: 66 FQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPGI I ++ + L++S NK+ FL V+++
Sbjct: 61 VKALDISKVQTVIDIGTGAGFPGIPLKIAFPHLK---ITLLDSLNKRIRFLDSVIEELNL 117
Query: 124 -RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ D+ +RA+A+L TL EY P++
Sbjct: 118 TDIHTIHGRAEDFARQADYREQFDLCVSRAVANLSTLSEYCLPYVK 163
>gi|229087969|ref|ZP_04220076.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
gi|228695338|gb|EEL48216.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
Length = 239
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
+S LE+ E ++ ++W++K+NL + + E+ +++H D + + P
Sbjct: 14 GITLSPRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSI 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
D+G+G GFP I I ++ + +++S K+ +FL ++ QK F E
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLK---ITIVDSLQKRINFLNHLAQKLELSDVAFCHDRAET 130
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 131 FGKKDGVRESFDIVMARAVARLSVLSELCLPLVK 164
>gi|307284003|ref|ZP_07564173.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
gi|306503374|gb|EFM72623.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
Length = 291
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 57 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 116
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 117 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 173
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 174 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|227518144|ref|ZP_03948193.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227555650|ref|ZP_03985697.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229547164|ref|ZP_04435889.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294781216|ref|ZP_06746563.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|307268879|ref|ZP_07550244.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|307273954|ref|ZP_07555164.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|307277345|ref|ZP_07558443.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|307289974|ref|ZP_07569900.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|312901334|ref|ZP_07760615.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|312952967|ref|ZP_07771823.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|227074412|gb|EEI12375.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227175227|gb|EEI56199.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229307746|gb|EEN73733.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294451679|gb|EFG20134.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|306498968|gb|EFM68460.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|306505979|gb|EFM75151.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|306509262|gb|EFM78322.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|306514795|gb|EFM83345.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|310629108|gb|EFQ12391.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|311291567|gb|EFQ70123.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|315030098|gb|EFT42030.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4000]
gi|315033591|gb|EFT45523.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0017]
gi|315036256|gb|EFT48188.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0027]
gi|315148291|gb|EFT92307.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4244]
gi|315151256|gb|EFT95272.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0012]
gi|315153741|gb|EFT97757.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0031]
gi|315155033|gb|EFT99049.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0043]
gi|315158678|gb|EFU02695.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0312]
gi|315172084|gb|EFU16101.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1342]
gi|315576179|gb|EFU88370.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309B]
gi|315582990|gb|EFU95181.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309A]
gi|327536398|gb|AEA95232.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis OG1RF]
Length = 291
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 57 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 116
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 117 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 173
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 174 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|15676117|ref|NP_273248.1| glucose-inhibited division protein B [Neisseria meningitidis MC58]
gi|20177905|sp|Q9K1G3|RSMG_NEIMB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|7225410|gb|AAF40647.1| glucose inhibited division protein B [Neisseria meningitidis MC58]
gi|325145386|gb|EGC67663.1| methyltransferase GidB [Neisseria meningitidis M01-240013]
gi|325199402|gb|ADY94857.1| methyltransferase GidB [Neisseria meningitidis H44/76]
gi|325205282|gb|ADZ00735.1| methyltransferase GidB [Neisseria meningitidis M04-240196]
Length = 207
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLVYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|309379103|emb|CBX22234.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 207
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVITSRAFAELADFVSWTGHLLKD 159
>gi|89897799|ref|YP_521286.1| hypothetical protein DSY5053 [Desulfitobacterium hafniense Y51]
gi|219670948|ref|YP_002461383.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
gi|122480419|sp|Q24MA0|RSMG_DESHY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89337247|dbj|BAE86842.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219541208|gb|ACL22947.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
Length = 239
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +EK + ++W++K+NL S + E+ ++H DSL + L + D
Sbjct: 18 NIELSGDQIEKFSIYADRLVEWNEKVNLTSITEPEEIILKHFVDSLALLSLVQGKRL-AD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA- 135
+G+G GFPGI I L +E LV+ + + FL V+++ + + R ++
Sbjct: 77 IGTGAGFPGIPLKILLPEVEVYLVDSLAK---RLDFLETVIKELKLTKVQTVHARAEDFA 133
Query: 136 --PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P T D +++RA+A L LLEY+ P L +
Sbjct: 134 RDPHYRETFDCVTSRAVARLPVLLEYAVPLLKK 166
>gi|315039148|ref|YP_004032716.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325957619|ref|YP_004293031.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|312277281|gb|ADQ59921.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325334184|gb|ADZ08092.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|327184264|gb|AEA32711.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1118]
Length = 240
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + ++ + ++ + ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPEKFVLELSKHNFELTDKQKQQFKLYFKMLIEVNEHVNLTRITEEDEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I ++ V +++S K+ +FL+ ++ +
Sbjct: 61 PLFTFGAVFKDGATLCDVGAGAGFPSIPLKILKPGLK---VTIVDSLQKRLNFLKDLISE 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 118 LGLTDVELVHGRAEDVGQNKLYRERFDIVTARAVARMSVLSEYCLPLVKK 167
>gi|229035140|ref|ZP_04189086.1| Methyltransferase GidB [Bacillus cereus AH1271]
gi|228728206|gb|EEL79236.1| Methyltransferase GidB [Bacillus cereus AH1271]
Length = 239
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ E ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|152979952|ref|YP_001355328.1| 16S rRNA methyltransferase GidB [Janthinobacterium sp. Marseille]
gi|189045855|sp|A6T481|RSMG_JANMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151280029|gb|ABR88439.1| glucose inhibited division protein B [Janthinobacterium sp.
Marseille]
Length = 220
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ N+S + KL + L KW+ NL + +H+ DSL +D
Sbjct: 21 SLNLSEAQITKLIDYLALMAKWNSVYNLTAVRDPVQMVTQHLLDSLAAVSAFSNAKNVLD 80
Query: 78 LGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
+G+GGG PGI+ +I + +++I++ +KK +FL V + E
Sbjct: 81 VGAGGGLPGIVLAIWAAEAHPEMRISMIDTVHKKTAFLTQVKAELNLSNVSVYTARVEQW 140
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q DVI++RA ADL + +S L
Sbjct: 141 QAPQKFDVITSRAFADLSDFVNWSEHLLAD 170
>gi|229164433|ref|ZP_04292361.1| Methyltransferase GidB [Bacillus cereus R309803]
gi|228619038|gb|EEK75936.1| Methyltransferase GidB [Bacillus cereus R309803]
Length = 239
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ E ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|15673325|ref|NP_267499.1| glucose-inhibited division protein B [Lactococcus lactis subsp.
lactis Il1403]
gi|281491888|ref|YP_003353868.1| ribosomal rNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|13878504|sp|Q9CFX1|RSMG_LACLA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|12724325|gb|AAK05441.1|AE006366_10 glucose-inhibited division protein GidB [Lactococcus lactis subsp.
lactis Il1403]
gi|281375599|gb|ADA65105.1| Ribosomal RNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|326406879|gb|ADZ63950.1| glucose inhibited division protein B [Lactococcus lactis subsp.
lactis CV56]
Length = 238
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSI 74
+S + +++ E ++ L ++W++KINL + + + +++H DS+ P
Sbjct: 14 DIQLSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPILYGLITDQPVS 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL + ++ + R +
Sbjct: 74 ILDIGAGAGFPSLPMKIIFPELK---VTIIDSLNKRINFLSLLTEELGLENVTLLHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T D ++ARA+A L L E++ P+L +
Sbjct: 131 DFGQDANYRGTFDFVTARAVARLSVLTEFTIPFLKK 166
>gi|229829505|ref|ZP_04455574.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
gi|229791936|gb|EEP28050.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
Length = 241
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y S N L Y +S + +Y + ++W+K++NL + + ++ +H
Sbjct: 1 MEYDISKFTEGLNCL--GYQLSEHQYQSFLTYYDMLIEWNKRMNLTTITEYQEVVSKHFL 58
Query: 61 DSLRVFQLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DSL + + +DLG+G GFPGI I ++ + L++S NK+ FL+ V+
Sbjct: 59 DSLSISNICSGLEGKLLDLGTGAGFPGIPLKIVYPDLK---ITLMDSLNKRIRFLQEVID 115
Query: 120 KTAA-RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + R +E + + D + +RA+A++ TL EY P++ +
Sbjct: 116 RLEFKNIEAIHGRAEEMSRQKKYRESYDHVVSRAVANISTLSEYCLPFVRE 166
>gi|257081315|ref|ZP_05575676.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
gi|256989345|gb|EEU76647.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
Length = 238
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 4 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 64 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 120
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P ++
Sbjct: 121 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLAKKE 166
>gi|293384807|ref|ZP_06630652.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|293388229|ref|ZP_06632748.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|312908849|ref|ZP_07767788.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|312979508|ref|ZP_07791190.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
gi|291077889|gb|EFE15253.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|291082376|gb|EFE19339.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|310625287|gb|EFQ08570.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|311287690|gb|EFQ66246.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
Length = 291
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 57 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 116
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 117 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 173
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 174 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|89100945|ref|ZP_01173792.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
gi|89084354|gb|EAR63508.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
Length = 238
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N ++S +++ +Y ++W++K+NL + + + +++H DS+
Sbjct: 1 MNTEQFIKMLEEKGISLSPRQIDQYNIYYETLVEWNEKMNLTAITDKPEVYLKHFYDSVS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP + I I V +++S NK+ +FL ++ K
Sbjct: 61 AAFYFDFSKPLHICDVGAGAGFPSLPIKIAFPEI---SVTIVDSLNKRINFLEHLAGKLG 117
Query: 123 A-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R + + + DV++ARA+A + L E P
Sbjct: 118 LENVRFVHDRAETFGQNKEYREAFDVVTARAVARMSVLTELCLPLAK 164
>gi|295398148|ref|ZP_06808197.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
gi|294973667|gb|EFG49445.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
Length = 238
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N +++ ++ + + + ++ L ++W++KINL + + +E+ +++H DSL
Sbjct: 1 MNPEQFKSSLAEAGIQLNDQQMAQFNRYFELLVEWNEKINLTAITALEEVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
V D+GSG GFP I I L +++ + +++S NK+ +F+ VV +
Sbjct: 61 VAMHVEMADQEYRLVDVGSGAGFPSIPLKIALPNLD---ITIVDSLNKRINFINEVVNEL 117
Query: 122 AAR-GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + + PQ D +ARA+A L+ L E+ P + +
Sbjct: 118 GLEGVHAYHDRAEIFGQNPQFRDQFDFATARAVARLNLLAEFCLPLVKK 166
>gi|298370291|ref|ZP_06981607.1| 16S rRNA methyltransferase GidB [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281751|gb|EFI23240.1| 16S rRNA methyltransferase GidB [Neisseria sp. oral taxon 014 str.
F0314]
Length = 207
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L++ ++S +KL + + KW+K NL + H+ DSL +
Sbjct: 7 LQSGLKEMGLDLSGGQQDKLLAYVEMLKKWNKTYNLTALRDESQIISHHLLDSLTLPPYL 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK SFL+ + +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDLQ---ITLLDANTKKTSFLQQAAIELELKNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAVQGLR--ADVITSRAFAELADFVNWTAHLLQN 159
>gi|229176158|ref|ZP_04303650.1| Methyltransferase GidB [Bacillus cereus MM3]
gi|228607317|gb|EEK64647.1| Methyltransferase GidB [Bacillus cereus MM3]
Length = 239
Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ E ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSEPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + + D++ ARA+A L L E P +
Sbjct: 118 LGDVAFCHDRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|315168466|gb|EFU12483.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1341]
Length = 291
Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 57 EEFRQLLAEKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 116
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 117 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 173
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 174 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|121634065|ref|YP_974310.1| glucose-inhibited division protein B [Neisseria meningitidis FAM18]
gi|166224599|sp|A1KRM2|RSMG_NEIMF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120865771|emb|CAM09500.1| glucose inhibited division protein B [Neisseria meningitidis FAM18]
Length = 207
Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTGHLLKD 159
>gi|322373911|ref|ZP_08048446.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
gi|321277283|gb|EFX54353.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
Length = 237
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVF 66
+N+S++ ++ + ++ L ++W++KINL + + D +++H D +
Sbjct: 6 FYKALQEEGFNLSQQQKDQFQRYFELLVEWNEKINLTAITDKNDVYLKHFYDSLAPVLQG 65
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G 125
+ +D+G+G GFP + I +E V +I+S NK+ +FL + +
Sbjct: 66 HIKNQDIRLLDIGAGAGFPSLPMKILCPKLE---VTIIDSLNKRINFLNLLADELQLSGV 122
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ DV++ARA+A L L E + P+L
Sbjct: 123 HFYHGRAEDFGQDKSFRAQFDVVTARAVARLQILSELTIPFLK 165
>gi|309803370|ref|ZP_07697465.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|309809024|ref|ZP_07702898.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|312871035|ref|ZP_07731137.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|312872104|ref|ZP_07732179.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|312873445|ref|ZP_07733495.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|312875319|ref|ZP_07735327.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|325913550|ref|ZP_08175915.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|329920815|ref|ZP_08277402.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
gi|308164534|gb|EFO66786.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|308170680|gb|EFO72699.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|311089153|gb|EFQ47589.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|311090954|gb|EFQ49348.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|311092397|gb|EFQ50766.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|311093363|gb|EFQ51705.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|325477129|gb|EGC80276.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|328935595|gb|EGG32062.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
Length = 239
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
NS + LL +S E+ +Y + ++K NL + ++ +++H DSL
Sbjct: 1 MNSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 61 PIIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQ 117
Query: 121 TAA-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 118 LGLDNITLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 166
>gi|114798745|ref|YP_762233.1| methyltransferase GidB [Hyphomonas neptunium ATCC 15444]
gi|122941980|sp|Q0BWB0|RSMG_HYPNA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114738919|gb|ABI77044.1| methyltransferase GidB [Hyphomonas neptunium ATCC 15444]
Length = 207
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 55/161 (34%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L +VSRETL++L+ W +K NL+ W RHV DS ++
Sbjct: 1 MSERDDRAAFLAANDVSRETLDRLDRVIDTLDVWRQKSNLIGPKEWPQIWTRHVGDSWQL 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P + +DLGSG GFPG+I + G V +IES KK +FLR +Q+
Sbjct: 61 LDHIPETAHLVDLGSGAGFPGLIIAAAR---SLGHVTMIESVGKKCAFLRAAIQEADLSA 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ AP + ++ARA A L LL+Y+ PWL +
Sbjct: 118 AVHQGRVEAAPPIKAEF--VTARAFAPLPELLDYAAPWLRK 156
>gi|28899853|ref|NP_799458.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus RIMD
2210633]
gi|153838483|ref|ZP_01991150.1| methyltransferase GidB [Vibrio parahaemolyticus AQ3810]
gi|260361981|ref|ZP_05774986.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus K5030]
gi|260876532|ref|ZP_05888887.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AN-5034]
gi|260897411|ref|ZP_05905907.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus Peru-466]
gi|260902396|ref|ZP_05910791.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AQ4037]
gi|31076671|sp|Q87K99|RSMG_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28808105|dbj|BAC61342.1| glucose inhibited division protein B [Vibrio parahaemolyticus RIMD
2210633]
gi|149748106|gb|EDM58965.1| methyltransferase GidB [Vibrio parahaemolyticus AQ3810]
gi|308087900|gb|EFO37595.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus Peru-466]
gi|308090351|gb|EFO40046.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AN-5034]
gi|308107140|gb|EFO44680.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AQ4037]
gi|308114160|gb|EFO51700.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus K5030]
Length = 211
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +VS + E+L + L KW+K NL S + ++H+ DS+ V H
Sbjct: 8 LDSLIAQTDLDVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VVGTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 67 LQGERFIDVGTGPGLPGIPLAIMHPEK---TFFLLDSLGKRIRFIKQVVHTLGLKNVTPI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
E Q D + +RA A + ++E+ ++
Sbjct: 124 QSRVEEFQPEEKFDGVLSRAFASMTDMVEWCHHLPKEQD 162
>gi|49476316|ref|YP_034357.1| glucose-inhibited division protein B [Bartonella henselae str.
Houston-1]
gi|55976398|sp|Q6G1L0|RSMG_BARHE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49239124|emb|CAF28428.1| Glucose inhibited division protein b [Bartonella henselae str.
Houston-1]
Length = 215
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 1/165 (0%)
Query: 4 CDSNSILRANYLLNTYN-VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D + + LL + VSRET++ L +F L ++W+K INL+SSST+ W RH+ DS
Sbjct: 1 MDFSIEQKYQELLKIISSVSRETMQDLMHFESLIIQWNKHINLISSSTIPLLWTRHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+++ LH W DLGSGGGFP I+ +I + + G ++L+ES KK +FLR V+ +
Sbjct: 61 AQIYPLHSDLLHWCDLGSGGGFPAIVIAIFMKEKKTGHIDLVESNGKKVAFLRTVIAQLD 120
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V+ CRI++ Q I +VI+AR LA LD LL FP L QK
Sbjct: 121 LPATVYHCRIEDVTQKIKNPEVITARGLACLDDLLRLIFPLLTQK 165
>gi|296111116|ref|YP_003621497.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
gi|295832647|gb|ADG40528.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
Length = 239
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++ + + + E ++ L + ++++NL + + +D +++H DSL V +
Sbjct: 14 GITLTDQQIRQFEQYFNLLVARNEQVNLTAITEKDDVYLKHFYDSLTVLFYEKKLKVPGK 73
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
ID+G+G GFP + I L ++ + +++S K+ +FL+ VV + ++ R
Sbjct: 74 TLIDIGTGAGFPSLPLKIVLPDLQ---ITMVDSLQKRVNFLQEVVTELGLSHVEIVHGRA 130
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ P+ D +ARA+A L EY+ P++
Sbjct: 131 EDIGQKPKYREQFDYATARAVARTSVLAEYTLPFVK 166
>gi|116254461|ref|YP_770299.1| 16S rRNA methyltransferase GidB [Rhizobium leguminosarum bv. viciae
3841]
gi|166224606|sp|Q1MA20|RSMG_RHIL3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115259109|emb|CAK10220.1| putative glucose inhibited division protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 205
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 84/153 (54%), Positives = 114/153 (74%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV+ ST++D W RH+ DS +VFQ+HP P W
Sbjct: 3 LNGLRVSRETQERLQHFAALFQKWAKAINLVAPSTLDDLWHRHIADSSQVFQIHPQPITW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++GG V+L+ES +KKA+FLR +++T ARG V + RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELQGGWVHLVESNHKKAAFLRTALRETNARGSVHSIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ C ISARAL DLD L+ YS PW+ K+
Sbjct: 123 YTEVRECSAISARALTDLDGLIGYSSPWMLGKE 155
>gi|328471204|gb|EGF42106.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus 10329]
Length = 211
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +VS + E+L + L KW+K NL S + ++H+ DS+ V H
Sbjct: 8 LDSLIAQTDLDVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VVGTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 67 LQGERFIDVGTGPGLPGIPLAIMHPEK---TFFLLDSLGKRIRFIKQVVHTLGLKNVTPI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
E Q D + +RA A + ++E+ ++
Sbjct: 124 QSRVEEFQPEEKFDGVLSRAFASMTDMVEWCHHLPKEQD 162
>gi|13473774|ref|NP_105342.1| 16S rRNA methyltransferase GidB [Mesorhizobium loti MAFF303099]
gi|20177897|sp|Q98DZ2|RSMG_RHILO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14024525|dbj|BAB51128.1| glucose inhibited division protein B; GidB [Mesorhizobium loti
MAFF303099]
Length = 210
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/144 (41%), Positives = 94/144 (65%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F +F KW++ INLV+ ST D W RH+ DS ++ ++ P + W+D+GS
Sbjct: 16 VSRETFDRLVAFEAMFQKWNRSINLVAQSTAGDVWQRHILDSAQLARIEPNATHWVDIGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ G ++L+E KKASFL+ V+ + +V A RI+++ ++
Sbjct: 76 GGGFPGLVMAFLLAERAGASIDLVECNRKKASFLQTVIGQFNLPARVVARRIKDSHALVP 135
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
+++ARALA L LLE + PWL
Sbjct: 136 QPQIVTARALASLSVLLELTAPWL 159
>gi|77464806|ref|YP_354310.1| putative GidB, glucose inhibited division protein [Rhodobacter
sphaeroides 2.4.1]
gi|123590766|sp|Q3IYH5|RSMG_RHOS4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77389224|gb|ABA80409.1| putative GidB, Glucose inhibited division protein [Rhodobacter
sphaeroides 2.4.1]
Length = 206
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
+ +L +VSRET EKL +F L KW+K +NL+ STV+ W RHV DS ++
Sbjct: 1 MMQESVLAQLDVSRETSEKLSHFVALVEKWNKAVNLIGRSTVDSIWTRHVLDSAQLRTHL 60
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +W+DLGSG GFPGI+ +I + L+ES +KA+FLR ++ V
Sbjct: 61 ASQPRLWLDLGSGSGFPGIVVAIMAAYESPESRFVLVESDQRKATFLRTACRELKLSASV 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A RI+ P DVISARALA L L + P L
Sbjct: 121 LAARIESLPPQ--KADVISARALAALPDLCALAAPHLAP 157
>gi|317055656|ref|YP_004104123.1| methyltransferase GidB [Ruminococcus albus 7]
gi|315447925|gb|ADU21489.1| methyltransferase GidB [Ruminococcus albus 7]
Length = 236
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
N +S E E+LE + + ++++ +NL + + E ++H DS+ F P
Sbjct: 13 NGIALSAEQAERLEKYADMLVEYNNMVNLTAITDDEGIAVKHFLDSIYPFTLFDLPEGVS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
ID+G+G GFP + + L++S NK+ +FL+ + + R +E
Sbjct: 73 MIDVGTGAGFPSCPLKVYR---GDIRLTLLDSLNKRVNFLQSLSDTIGLDAECVHGRAEE 129
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ +ARA+A+L L EY P++
Sbjct: 130 FGKKDEYRESFDIATARAVANLTDLCEYCLPFVK 163
>gi|259501221|ref|ZP_05744123.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|302191029|ref|ZP_07267283.1| 16S rRNA methyltransferase GidB [Lactobacillus iners AB-1]
gi|325911351|ref|ZP_08173764.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
gi|259167348|gb|EEW51843.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|325476911|gb|EGC80064.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
Length = 239
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
NS + LL +S E+ +Y + ++K NL + ++ +++H DSL
Sbjct: 1 MNSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 61 PIIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQ 117
Query: 121 TAA-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 118 LGLDNITLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 166
>gi|313667500|ref|YP_004047784.1| glucose inhibited division protein B [Neisseria lactamica ST-640]
gi|313004962|emb|CBN86390.1| glucose inhibited division protein B [Neisseria lactamica 020-06]
Length = 207
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTGHLLKD 159
>gi|302393072|ref|YP_003828892.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
gi|302205149|gb|ADL13827.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
Length = 240
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L A ++ + ++ + + +W++K+NL + E+ I+H DSL
Sbjct: 5 ELLAAGTKELGLELTSKQIDAFMNYLDILQEWNQKMNLTAIDDSEEIVIKHFLDSLSSVS 64
Query: 68 LHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ IDLG+G GFPGI I ++ + L++S KK +FL+ +V++ +G
Sbjct: 65 VMDLAGDEKMIDLGTGAGFPGIPLKIFYPKLD---LTLLDSTKKKITFLKNLVRELNLKG 121
Query: 126 -KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q + DV+ ARA+A L+ L EY+ P+L
Sbjct: 122 IEFIHGRAEDYGQKSKYRGSYDVVIARAVAPLNILSEYAIPFLKP 166
>gi|94987908|ref|YP_596009.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS9429]
gi|166224619|sp|Q1JND4|RSMG_STRPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94541416|gb|ABF31465.1| methyltransferase [Streptococcus pyogenes MGAS9429]
Length = 237
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +++S + E+ + ++ L ++W+ KINL + + + + +H DS+ + I
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYPQHFYDSIAPILQAFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|309792061|ref|ZP_07686535.1| methyltransferase GidB [Oscillochloris trichoides DG6]
gi|308225868|gb|EFO79622.1| methyltransferase GidB [Oscillochloris trichoides DG6]
Length = 238
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 8/152 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
N++ L++L ++ L +W+++INL + + + + + RH DSL P +
Sbjct: 17 GLNLNPTQLDQLAHYAQLLREWNERINLTTITDLGEIYRRHFLDSLSLARFWGTGPQSLV 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK----VFACRI 132
D+GSG GFPG++ I + + L+ES KKA F+R+V ++ V A +
Sbjct: 77 DIGSGAGFPGLVLKILRPELR---LTLVESVGKKAEFMRHVARELNLYAVRVLDVRAEDV 133
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A+L L+EY+ P L
Sbjct: 134 GRNAAERAKHDLVTARAVAELRVLVEYALPLL 165
>gi|163745109|ref|ZP_02152469.1| methyltransferase GidB [Oceanibulbus indolifex HEL-45]
gi|161381927|gb|EDQ06336.1| methyltransferase GidB [Oceanibulbus indolifex HEL-45]
Length = 201
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 65/147 (44%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETL+KLE F L KW+ KINLVS S+++D W RH+ DS++VF+L W+D+G
Sbjct: 8 DVSRETLQKLEAFAELVRKWNPKINLVSKSSLDDLWDRHILDSVQVFRLVEQGGNWVDIG 67
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPGI+ +I + V L+ES +K +FLR +++ V RI+ A +
Sbjct: 68 SGGGFPGIVIAILNQKEQKFRVRLVESDQRKCAFLRTAIRELGLTATVDNERIENAQNLE 127
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D++SARAL+DL LL Y+ L
Sbjct: 128 --ADILSARALSDLSQLLAYAEMHLKP 152
>gi|331700959|ref|YP_004397918.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
gi|329128302|gb|AEB72855.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
Length = 245
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 76/168 (45%), Gaps = 12/168 (7%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N + L V+ + +++ + ++ L + ++ +NL S + + +++H DS+
Sbjct: 3 NDQFKKALLDKGIEVTDQQMDQFDAYFKLLVAVNEHVNLTSITEKPEVYLKHFYDSITPA 62
Query: 67 QLHPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
D+G+G GFP + I ++ V +++S NK+ +FL +V++
Sbjct: 63 FFVSQIKTAPLSICDVGAGAGFPSLPLKILFPQLK---VTIVDSLNKRINFLTTLVKELN 119
Query: 123 AR-GKVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
++F R +E + D+++ARA+A L L E P
Sbjct: 120 LTGVELFHARAEEFGGKRSEHREQYDLVTARAVARLTVLSELCLPLAK 167
>gi|306842825|ref|ZP_07475465.1| methyltransferase GidB [Brucella sp. BO2]
gi|306287019|gb|EFM58530.1| methyltransferase GidB [Brucella sp. BO2]
Length = 213
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKDATCWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++++ES KKA+FLR +V A RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERPGGSIDMVESAGKKAAFLRTAAGHLHVPARVHAARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|309805118|ref|ZP_07699171.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
gi|308165572|gb|EFO67802.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
Length = 239
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
NS + LL +S E+ +Y + ++K NL + ++ +++H DSL
Sbjct: 1 MNSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 61 PIIKFREIISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQ 117
Query: 121 TAA-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 118 LGLDNITLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 166
>gi|295094322|emb|CBK83413.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus sp. ART55/1]
Length = 235
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIW 75
+S + +E+ +Y + ++W+K +NL + + ED I+H DSL + +
Sbjct: 12 GLELSDKQIEQFSKYYDILVEWNKVMNLTAITEKEDVIIKHFADSLLLSKYKDLHENIDV 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFPGI I + + L++S NK+ FL V+ + R ++
Sbjct: 72 IDVGTGAGFPGIPLKIAFPELN---ITLMDSLNKRLKFLDEVIDELGLQDIHTVHSRAED 128
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D+ +RA+A+L TL E+ P++
Sbjct: 129 GGRDEMHREKYDLAVSRAVANLATLSEWCIPFVKP 163
>gi|30265500|ref|NP_847877.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42784678|ref|NP_981925.1| 16S rRNA methyltransferase GidB [Bacillus cereus ATCC 10987]
gi|47531068|ref|YP_022417.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. 'Ames
Ancestor']
gi|47568681|ref|ZP_00239378.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49188319|ref|YP_031572.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Sterne]
gi|49480474|ref|YP_039472.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65317463|ref|ZP_00390422.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Bacillus anthracis
str. A2012]
gi|118480509|ref|YP_897660.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis str. Al
Hakam]
gi|165873015|ref|ZP_02217636.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167635020|ref|ZP_02393337.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|167641727|ref|ZP_02399970.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|170689463|ref|ZP_02880653.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|170707495|ref|ZP_02897948.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|177655291|ref|ZP_02936845.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190569287|ref|ZP_03022181.1| 16S rRNA methyltransferase GidB [Bacillus anthracis Tsiankovskii-I]
gi|196036141|ref|ZP_03103541.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196045489|ref|ZP_03112720.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206975810|ref|ZP_03236721.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218906674|ref|YP_002454508.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|222098959|ref|YP_002533017.1| 16S rRNA methyltransferase gidb [Bacillus cereus Q1]
gi|225867463|ref|YP_002752841.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227818251|ref|YP_002818260.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228918094|ref|ZP_04081622.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228930488|ref|ZP_04093488.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936762|ref|ZP_04099553.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949204|ref|ZP_04111472.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229094593|ref|ZP_04225660.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|229124985|ref|ZP_04254159.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|229142231|ref|ZP_04270755.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|229187711|ref|ZP_04314847.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|229199694|ref|ZP_04326337.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|229600306|ref|YP_002869691.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|254687077|ref|ZP_05150935.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str.
CNEVA-9066]
gi|254724140|ref|ZP_05185925.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A1055]
gi|254735157|ref|ZP_05192867.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Western
North America USA6153]
gi|254742134|ref|ZP_05199821.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Kruger B]
gi|254755956|ref|ZP_05207988.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Vollum]
gi|254761364|ref|ZP_05213386.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Australia
94]
gi|300118816|ref|ZP_07056536.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|301056956|ref|YP_003795167.1| glucose-inhibited division protein B [Bacillus anthracis CI]
gi|38257413|sp|Q81JH4|RSMG_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976409|sp|Q6HAF4|RSMG_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976456|sp|Q72WU5|RSMG_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224574|sp|A0RLR0|RSMG_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725349|sp|B7JIK9|RSMG_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766877|sp|C3P3F3|RSMG_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766878|sp|C3LGT9|RSMG_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766879|sp|C1ER75|RSMG_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766880|sp|B9IT40|RSMG_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|30260178|gb|AAP29363.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42740610|gb|AAS44533.1| glucose-inhibited division protein B [Bacillus cereus ATCC 10987]
gi|47506216|gb|AAT34892.1| glucose-inhibited division protein B [Bacillus anthracis str. 'Ames
Ancestor']
gi|47554669|gb|EAL13023.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49182246|gb|AAT57622.1| glucose-inhibited division protein B [Bacillus anthracis str.
Sterne]
gi|49332030|gb|AAT62676.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|118419734|gb|ABK88153.1| 16S rRNA m(7)G-527 methyltransferase [Bacillus thuringiensis str.
Al Hakam]
gi|164711227|gb|EDR16783.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167510281|gb|EDR85684.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|167529494|gb|EDR92244.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|170127491|gb|EDS96365.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|170666565|gb|EDT17338.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|172080218|gb|EDT65310.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190559594|gb|EDV13585.1| 16S rRNA methyltransferase GidB [Bacillus anthracis Tsiankovskii-I]
gi|195991308|gb|EDX55276.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196023696|gb|EDX62372.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206745904|gb|EDZ57300.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218540166|gb|ACK92564.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|221243018|gb|ACM15728.1| glucose-inhibited division protein B [Bacillus cereus Q1]
gi|225789230|gb|ACO29447.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227006072|gb|ACP15815.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228583789|gb|EEK41964.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|228595779|gb|EEK53463.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|228641249|gb|EEK97556.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|228658486|gb|EEL14152.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|228688840|gb|EEL42671.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|228810487|gb|EEM56840.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228822971|gb|EEM68812.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829207|gb|EEM74844.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841574|gb|EEM86690.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229264714|gb|ACQ46351.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|298723784|gb|EFI64506.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|300379125|gb|ADK08029.1| glucose-inhibited division protein B [Bacillus cereus biovar
anthracis str. CI]
gi|324329433|gb|ADY24693.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 239
Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ E ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|52145290|ref|YP_086747.1| glucose-inhibited division protein B [Bacillus cereus E33L]
gi|81685204|sp|Q630C0|RSMG_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51978759|gb|AAU20309.1| glucose-inhibited division protein B [Bacillus cereus E33L]
Length = 239
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ E ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|319411324|emb|CBY91735.1| methyltransferase GidB (glucose-inhibited division protein B)
[Neisseria meningitidis WUE 2594]
gi|325143203|gb|EGC65543.1| methyltransferase GidB [Neisseria meningitidis 961-5945]
Length = 207
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMVVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTAHLLKD 159
>gi|229550734|ref|ZP_04439459.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|307286501|ref|ZP_07566600.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|229304167|gb|EEN70163.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|306502374|gb|EFM71651.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|315165660|gb|EFU09677.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1302]
Length = 291
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 57 EEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 116
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 117 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 173
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 174 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKRE 219
>gi|205371921|ref|ZP_03224741.1| glucose-inhibited division protein B [Bacillus coahuilensis m4-4]
Length = 224
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + ++S LE+ E ++ + ++W++K+NL + + E+ +++H DS+
Sbjct: 1 MNIEQFTSQLEEKGISLSPRQLEQFEQYFSILVEWNEKMNLTAITDREEVYLKHFFDSIS 60
Query: 65 VFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+G+G GFP I I I+ V++++S NK+ FL ++ +
Sbjct: 61 AAFYYDFSKDLHICDVGAGAGFPSIPLKICFPHIK---VSIVDSLNKRIQFLNFLGNELG 117
Query: 123 A-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R + + DV++ARA+A L L E P
Sbjct: 118 LEHVYFYHDRAETFGQNSDHREKYDVVTARAVARLSVLSELCLPLAK 164
>gi|260584386|ref|ZP_05852133.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
gi|260157904|gb|EEW92973.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
Length = 237
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW- 75
+ ++ ++ ++ L ++W++K+NL + + E +++H DSL + H +
Sbjct: 14 HGITLTDVQKKQFHQYFQLLVEWNEKMNLTAITDEEGVYLKHFYDSLALGFHHELSNQTL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ- 133
D+G+G GFP I I ++ V +++S NK+ +FL +V+ + F R +
Sbjct: 74 CDVGAGAGFPSIPLKIVFPDLK---VTIVDSLNKRITFLNTLVETLGLTDVQCFHDRAET 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + DV++ARA+A L L E+ P + ++
Sbjct: 131 FGQNKNFRASYDVVTARAVAKLSVLSEFCMPLVKKQ 166
>gi|224541704|ref|ZP_03682243.1| hypothetical protein CATMIT_00876 [Catenibacterium mitsuokai DSM
15897]
gi|224525373|gb|EEF94478.1| hypothetical protein CATMIT_00876 [Catenibacterium mitsuokai DSM
15897]
Length = 234
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIW 75
+S + +E+ E +Y + ++W++K+NL + + E +++H DSL + P+
Sbjct: 13 KGIVLSEKQIEQFEKYYEILVEWNEKMNLTAITDREGVYLKHFYDSLTIAFDFPFSNQTI 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+G+G GFP + I + V +++S NK+ +FL ++ ++ + A R ++
Sbjct: 73 CDVGAGAGFPSVPLKIVYPELN---VTIVDSLNKRITFLNHLFKELELDHIQAVASRAED 129
Query: 135 A-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D++ ARA+A L+ L E P + +
Sbjct: 130 FCKDHRESFDIVMARAVARLNILDELCLPLVKK 162
>gi|296840695|ref|ZP_06863230.2| 16S rRNA methyltransferase GidB [Neisseria polysaccharea ATCC
43768]
gi|296840209|gb|EFH24147.1| 16S rRNA methyltransferase GidB [Neisseria polysaccharea ATCC
43768]
Length = 238
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 5 DSN--SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D LR ++S ++L + L KW+K NL + E + H+ DS
Sbjct: 31 DMERKERLRTGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMVVHHLLDS 90
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 91 LTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELG 147
Query: 123 A-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 148 LDNVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTAHLLKD 190
>gi|256851845|ref|ZP_05557233.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260661894|ref|ZP_05862804.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|282931977|ref|ZP_06337441.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
gi|297205469|ref|ZP_06922865.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
gi|256615803|gb|EEU20992.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260547363|gb|EEX23343.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|281303919|gb|EFA96057.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
gi|297150047|gb|EFH30344.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
Length = 239
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + +S++ +++ +Y ++ ++ +NL + +E+ +++H DSL F
Sbjct: 4 ELFIKQLAEKGFALSQKQIDQFSKYYQKLIEVNEYVNLTRITDLEEVYLKHFYDSLTPFL 63
Query: 68 LHPYPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+P D+G+G GFP I I + ++ +V+ + + K + L + +
Sbjct: 64 EYPELFKKARICDVGAGAGFPSIPIKILVPEMQLAIVDSLNKRLKFLADLTADLD--LGQ 121
Query: 125 GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A++ TL EY P + +
Sbjct: 122 VELVHGRAEDIGQNVKYREKFDLVTARAVANMATLSEYCLPLVKE 166
>gi|257866242|ref|ZP_05645895.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257873244|ref|ZP_05652897.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257875877|ref|ZP_05655530.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325567658|ref|ZP_08144325.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
gi|257800200|gb|EEV29228.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257807408|gb|EEV36230.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257810043|gb|EEV38863.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325159091|gb|EGC71237.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
Length = 238
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPS 73
N ++ E +EK ++ ++W++K+NL + + + +++H DS+ S
Sbjct: 12 KNGIVLTEEQMEKFAVYFERLVEWNQKMNLTAITEKSEVYLKHFYDSVSLAFETAFDPQS 71
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+GSG GFP I I +E V +++S NK+ +FL+ +V ++ R
Sbjct: 72 HLCDVGSGAGFPSIPLKIVFPELE---VTIVDSLNKRITFLQTLVTDLQLENVHLYHDRA 128
Query: 133 Q---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + PQ D ++ARA+A L+ L E P + +
Sbjct: 129 ETFGQNPQFRGQFDYVTARAVARLNVLTELCVPLVKK 165
>gi|308388408|gb|ADO30728.1| glucose inhibited division protein B [Neisseria meningitidis
alpha710]
gi|325131047|gb|EGC53772.1| methyltransferase GidB [Neisseria meningitidis OX99.30304]
gi|325202975|gb|ADY98429.1| methyltransferase GidB [Neisseria meningitidis M01-240149]
gi|325207227|gb|ADZ02679.1| methyltransferase GidB [Neisseria meningitidis NZ-05/33]
Length = 207
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|261391726|emb|CAX49175.1| methyltransferase GidB (glucose-inhibited division protein B)
[Neisseria meningitidis 8013]
Length = 207
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|163737992|ref|ZP_02145408.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
gi|161388608|gb|EDQ12961.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
Length = 204
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 65/148 (43%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET ++L+++ L KWS KINL++ ST++D W RH+ DS+++ Q +P W+D+G
Sbjct: 10 HVSRETYDRLKHYESLVKKWSPKINLIAKSTLDDVWDRHIVDSVQICQGMDFPQTWLDIG 69
Query: 80 SGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFPG++ +I + ++ LIES +K +FLR +++ A KV + RI++ P M
Sbjct: 70 SGGGFPGVVVAILAAERAPDCVITLIESDQRKCAFLRTAIRECGANAKVVSERIEKVPPM 129
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
DVISARALADL TLL ++ L
Sbjct: 130 --AADVISARALADLTTLLGFAERHLQP 155
>gi|126463649|ref|YP_001044763.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17029]
gi|189040715|sp|A3PNS5|RSMG_RHOS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126105313|gb|ABN77991.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17029]
Length = 206
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
+ +L +VSRET EKL +F L KW+K +NL+ STV+ W RHV DS ++
Sbjct: 1 MMQESVLAQLDVSRETSEKLSHFVALVEKWNKAVNLIGRSTVDSIWTRHVLDSAQLRTHL 60
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +W+DLGSG GFPGI+ +I + L+ES +KA+FLR ++ V
Sbjct: 61 TSQPRLWLDLGSGSGFPGIVVAIMAADESPESRFVLVESDQRKATFLRTACRELKLSAAV 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A RI+ P DVISARALA L L + P L
Sbjct: 121 LAARIESLPPQ--KADVISARALAALPDLCALAAPHLAP 157
>gi|325135116|gb|EGC57743.1| methyltransferase GidB [Neisseria meningitidis M13399]
Length = 207
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISEMAQDRLLVYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|319899516|ref|YP_004159613.1| glucose inhibited division protein B [Bartonella clarridgeiae 73]
gi|319403484|emb|CBI77064.1| glucose inhibited division protein B [Bartonella clarridgeiae 73]
Length = 219
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 63/147 (42%), Positives = 94/147 (63%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET++ L F L ++W+K +NL+S++T+ W RH+ DS +++ L W DLGS
Sbjct: 19 VSRETMKLLIQFESLVIQWNKHVNLISAATIPVLWTRHILDSAQIYPLKSQSLHWCDLGS 78
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFP I+ +I L +GG ++L+ES KK +FLR V+ + V CR+++ + I
Sbjct: 79 GGGFPAIVIAIFLKEKKGGHIDLVESNGKKVAFLRNVIAQLNLPATVHHCRVEDVYKKIK 138
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
D+++AR LA LDTLL+ PWL QK
Sbjct: 139 APDILTARGLASLDTLLQLMSPWLTQK 165
>gi|257437747|ref|ZP_05613502.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
gi|257199762|gb|EEU98046.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
Length = 235
Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 9 ILRANYLLN-----TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++ N L ++ E L++L+ F + + +++K+NL + + E +H DSL
Sbjct: 1 MIDKNRLEQKCSMWNIALTGEQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSL 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+D+G+G GFPGI+T I +E + L+E K+ FL+Y +
Sbjct: 61 LFASQPEVAGKMVDVGAGAGFPGIVTKIYKPELE---LTLMEPTGKRVEFLKYACAQLGL 117
Query: 124 RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
G FA E D+ SARA+A L L EY P +
Sbjct: 118 TGVEFAKERAEEAARKAWREQFDLASARAVAALPMLAEYCLPLVK 162
>gi|315653263|ref|ZP_07906186.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
gi|315489426|gb|EFU79065.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
Length = 224
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
NS + LL +S E+ +Y + ++K NL + ++ +++H DSL
Sbjct: 1 MNSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 61 PIIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQ 117
Query: 121 TAA-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 118 LGLDNITLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 166
>gi|317133702|ref|YP_004093016.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
gi|315471681|gb|ADU28285.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
Length = 237
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
++ L +L + L ++W++KINL + + ++ ++H DSL + P
Sbjct: 14 NLPLTDGQLGQLNQYARLLVEWNEKINLTAITDRQEIAVKHFLDSLSLLHFVPPEQNAVV 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+GSG GFPG++ I + + ++ K+ FL + R +E
Sbjct: 74 LDVGSGAGFPGMVLRIARPDLR---LTCMDGTQKRIHFLSELAAALGLQEVVCLHARAEE 130
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A P + T D ++ARA+A+L L EY P++
Sbjct: 131 AGRDPALRETFDYVTARAVANLHALAEYCLPFVKP 165
>gi|30023506|ref|NP_835137.1| glucose-inhibited division protein B [Bacillus cereus ATCC 14579]
gi|75761488|ref|ZP_00741452.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218232716|ref|YP_002370257.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218900623|ref|YP_002449034.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228905426|ref|ZP_04069381.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|228942631|ref|ZP_04105163.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228955732|ref|ZP_04117727.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228961746|ref|ZP_04123349.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228968634|ref|ZP_04129617.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228975561|ref|ZP_04136113.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982197|ref|ZP_04142486.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|229020707|ref|ZP_04177434.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|229026923|ref|ZP_04183246.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|229051151|ref|ZP_04194695.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|229072947|ref|ZP_04206143.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|229099909|ref|ZP_04230832.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|229112895|ref|ZP_04242426.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|229118972|ref|ZP_04248317.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|229130728|ref|ZP_04259681.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|229148032|ref|ZP_04276371.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|229181728|ref|ZP_04309051.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|296505910|ref|YP_003667610.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|38257406|sp|Q814F8|RSMG_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725350|sp|B7IST2|RSMG_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725351|sp|B7H7A0|RSMG_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29899067|gb|AAP12338.1| Glucose inhibited division protein B [Bacillus cereus ATCC 14579]
gi|74491027|gb|EAO54279.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218160673|gb|ACK60665.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218542469|gb|ACK94863.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228601761|gb|EEK59259.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|228635457|gb|EEK91948.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|228652745|gb|EEL08630.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|228664497|gb|EEL19993.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|228670574|gb|EEL25887.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|228683524|gb|EEL37479.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|228710193|gb|EEL62171.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|228722214|gb|EEL73615.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|228734381|gb|EEL85052.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|228740602|gb|EEL90873.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|228777549|gb|EEM25827.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|228784171|gb|EEM32198.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791063|gb|EEM38681.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228797940|gb|EEM44950.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228803960|gb|EEM50584.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228817057|gb|EEM63150.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228854246|gb|EEM98949.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|296326962|gb|ADH09890.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|326943280|gb|AEA19176.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 239
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ + ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|15616622|ref|NP_244928.1| 16S rRNA methyltransferase GidB [Bacillus halodurans C-125]
gi|11132401|sp|Q9K5M8|RSMG_BACHD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|10176685|dbj|BAB07779.1| glucose-inhibited division protein [Bacillus halodurans C-125]
Length = 238
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
+++S+ L++ E++Y ++W++K+NL + + E +++H D + + +
Sbjct: 14 GFSLSQAQLDQFEHYYHTLVEWNEKMNLTAITDKEGVYLKHFYDSLTAAFYVDFTKVATV 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
+D+G+G GFP I I + V +++S K+ FL ++ + +G F A
Sbjct: 74 VDVGAGAGFPSIPLKIVFPELR---VTIVDSLKKRIGFLEHLSETLGLKGTAFYHDRAET 130
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P
Sbjct: 131 FAQKKEHREQYDLVLARAVARLPVLSELCLPLAK 164
>gi|196041983|ref|ZP_03109270.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
gi|196027238|gb|EDX65858.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
Length = 239
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ E ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKSFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|297585586|ref|YP_003701366.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
gi|297144043|gb|ADI00801.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
Length = 237
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ ++ E + + + +Y L + W+ ++NL + + ED +++H DS+ +
Sbjct: 6 FKEALRKKGIELTDEQMRQFDAYYHLLVDWNTRMNLTAITDKEDVYLKHFYDSITACEFV 65
Query: 70 PYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GK 126
+ +D+G+G GFP I I +E V +I+S NK+ +FL + + +
Sbjct: 66 DFSKATSVVDVGAGAGFPSIPIKIVFPHLE---VTIIDSLNKRITFLHALSDALSLSGVQ 122
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +EA + D+ +RA+A + L E P++
Sbjct: 123 AIHSRAEEAGRMSEYRDRFDLAISRAVARMPVLTELCMPFVK 164
>gi|116627232|ref|YP_819851.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMD-9]
gi|122268165|sp|Q03MB7|RSMG_STRTD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116100509|gb|ABJ65655.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus thermophilus
LMD-9]
Length = 237
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVFQLHPYPSI 74
+++S++ ++ + ++ L ++W++KINL + + ++ +++H D + +
Sbjct: 14 GFDLSQKQKDQFQRYFELLVEWNEKINLTAITDKDEVFLKHFYDSLAPVLQGHIKNQSIQ 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
+D+G+G GFP + I +++ V +I+S N++ +FL ++ + + R +
Sbjct: 74 LLDIGAGAGFPSLPIKILCPNLD---VTIIDSLNRRITFLNFLSDELGLSGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|296134492|ref|YP_003641739.1| methyltransferase GidB [Thermincola sp. JR]
gi|296033070|gb|ADG83838.1| methyltransferase GidB [Thermincola potens JR]
Length = 244
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
+++ N+ ++ + E + L L+W+++INL S + V + I+H D +
Sbjct: 9 ELIKQGGQELNLNLDKKAVLLFETYKDLLLEWNQRINLTSITDVNEIAIKHFLDSLIILG 68
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+D+G+G GFPGI I + V L++S K+ +FLR V+ K
Sbjct: 69 EIEVKVQCRVVDIGTGAGFPGIPLKIARPDLN---VVLVDSLQKRVAFLREVIDKLQLKN 125
Query: 125 GKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+V+ R +E P+ + D+ ARA+A + L+EY+ P++
Sbjct: 126 IEVYHGRAEELGHYPEFRESFDLAVARAVAKMPVLVEYNLPFVR 169
>gi|110677825|ref|YP_680832.1| methyltransferase GidB [Roseobacter denitrificans OCh 114]
gi|123065967|sp|Q16CZ7|RSMG_ROSDO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|109453941|gb|ABG30146.1| methyltransferase GidB [Roseobacter denitrificans OCh 114]
Length = 199
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 62/145 (42%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET+ L+ ++ L LKW+ +INL+S S++ED W RH+ DS +V W+DLGS
Sbjct: 6 VSRETMHALQMYHDLLLKWNARINLISKSSIEDVWSRHIWDSAQVVDCVAKAKTWVDLGS 65
Query: 81 GGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
GGG PGI+ +I +I+ V L+ES +KA+FLR V+++ + +V RI++ +
Sbjct: 66 GGGMPGIVVAIFAKNIDPDRRVILVESDQRKAAFLRTVIRELSLNARVIVERIEDVAPLR 125
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
DV+SARALADL LL ++ L
Sbjct: 126 --ADVVSARALADLSVLLSFAQRHL 148
>gi|209558836|ref|YP_002285308.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes NZ131]
gi|238058259|sp|B5XJV1|RSMG_STRPZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209540037|gb|ACI60613.1| Methyltransferase gidB [Streptococcus pyogenes NZ131]
Length = 237
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ + I
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|217962974|ref|YP_002341552.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
gi|226725352|sp|B7HZG8|RSMG_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217066626|gb|ACJ80876.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
Length = 239
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ E ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGIPLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|146337361|ref|YP_001202409.1| 16S rRNA methyltransferase GidB [Bradyrhizobium sp. ORS278]
gi|189039485|sp|A4YJT3|RSMG_BRASO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146190167|emb|CAL74159.1| Glucose inhibited division protein B; Methyltransferase gidB
[Bradyrhizobium sp. ORS278]
Length = 222
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L+ + L L+W K NLV+ ST+ W RH+ DSL++ L P S W+DLGS
Sbjct: 26 VSRETERRLDRYIALLLEWQAKTNLVAPSTLPHLWTRHISDSLQLLDLAPEASFWVDLGS 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPG++ + L+ G V+L+E KKA+FLR ++ T + G V I + +
Sbjct: 86 GGGFPGVVLACALAERPGAKVHLVERIAKKAAFLREAIRVTGSPGTVHLSEIGDIVEKWS 145
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L L+ ++ P + +
Sbjct: 146 GRVDCVTARALAPLHQLVGFAEPLVKK 172
>gi|295426138|ref|ZP_06818805.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
gi|295064174|gb|EFG55115.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
Length = 240
Score = 114 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + ++++ + + E ++ ++ ++ +NL + ED +++H DS+
Sbjct: 1 MNPEQFVQELAKHNFDLTDKQKTQFEQYFKDLVETNEHVNLTRITDKEDVYLKHFFDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I L ++ + +++S K+ +FL+ ++ K
Sbjct: 61 PLFTFKDVFTKGATLCDVGAGAGFPSIPLKILLPDLK---ITIVDSLAKRLTFLKELIAK 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A++ L EY P + +
Sbjct: 118 LGLSEVELVHGRAEDVGQNKLYREHFDLVTARAVANMTVLSEYCLPLVKK 167
>gi|229153641|ref|ZP_04281817.1| Methyltransferase GidB [Bacillus cereus m1550]
gi|228629827|gb|EEK86480.1| Methyltransferase GidB [Bacillus cereus m1550]
Length = 239
Score = 114 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ + ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ PS D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPSSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|229542322|ref|ZP_04431382.1| methyltransferase GidB [Bacillus coagulans 36D1]
gi|229326742|gb|EEN92417.1| methyltransferase GidB [Bacillus coagulans 36D1]
Length = 238
Score = 114 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSI 74
+S E ++ E +Y + W+ K+NL + + + +++H D + F P
Sbjct: 13 KGIPLSEEQKQQFETYYKWLVDWNNKMNLTAITEKGEVYLKHFYDSLTAAFFTDFNGPLH 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFPGI I + +++++S K+ +FL ++ + + +F R +
Sbjct: 73 VCDVGAGAGFPGIPLKICFPELR---LSIVDSLQKRITFLGHLTEALGLKEVSLFHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ P+ DV+ ARA+A + L E P +
Sbjct: 130 TFAKKPEHREQYDVVMARAVARMSVLSELCLPLVKP 165
>gi|261378090|ref|ZP_05982663.1| 16S rRNA methyltransferase GidB [Neisseria cinerea ATCC 14685]
gi|269145540|gb|EEZ71958.1| 16S rRNA methyltransferase GidB [Neisseria cinerea ATCC 14685]
Length = 207
Score = 114 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L++ ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LQSGIAALGLDISTAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVITSRAFAELADFVSWTGHLLKD 159
>gi|229159042|ref|ZP_04287098.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
gi|228624461|gb|EEK81232.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
Length = 239
Score = 114 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ E ++ ++W++K+NL + + ++ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKKEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|206970084|ref|ZP_03231037.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|229193733|ref|ZP_04320674.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
gi|206734661|gb|EDZ51830.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|228589758|gb|EEK47636.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
Length = 239
Score = 114 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ + ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ + +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---ITIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|167766872|ref|ZP_02438925.1| hypothetical protein CLOSS21_01389 [Clostridium sp. SS2/1]
gi|317499287|ref|ZP_07957560.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
gi|167711420|gb|EDS21999.1| hypothetical protein CLOSS21_01389 [Clostridium sp. SS2/1]
gi|291558411|emb|CBL37211.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SSC/2]
gi|316893456|gb|EFV15665.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
Length = 236
Score = 114 bits (284), Expect = 5e-24, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIW 75
+S LE+ E +Y + ++ +K +NL + + + +H DSL + + +
Sbjct: 12 GIKLSDHQLEQFETYYEMLVEKNKVMNLTAITEKNEVIDKHFADSLALIKSGVSLTGQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+G+G GFPGI I +E + L++S NK+ FL V++ + R ++
Sbjct: 72 LDIGTGAGFPGIPLKIAFPELE---IVLLDSLNKRIKFLNEVIEALGLEKITAIHGRAED 128
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RA+A+L L EY P++ +
Sbjct: 129 FAKQKEYREQFDYVVSRAVANLTVLSEYCLPYVKE 163
>gi|254718102|ref|ZP_05179913.1| 16S rRNA methyltransferase GidB [Brucella sp. 83/13]
gi|265983055|ref|ZP_06095790.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
83/13]
gi|306839727|ref|ZP_07472529.1| methyltransferase GidB [Brucella sp. NF 2653]
gi|264661647|gb|EEZ31908.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
83/13]
gi|306405187|gb|EFM61464.1| methyltransferase GidB [Brucella sp. NF 2653]
Length = 213
Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 89/146 (60%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLITFEDLFRKWSKAINLASPSTLSDLWNRHILDSAQLFPLAKDATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ G ++L+ES KKA+FLR +V A RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERPDGCIDLVESAGKKAAFLRTASGHLHVPARVHAARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|254512294|ref|ZP_05124361.1| methyltransferase GidB [Rhodobacteraceae bacterium KLH11]
gi|221536005|gb|EEE38993.1| methyltransferase GidB [Rhodobacteraceae bacterium KLH11]
Length = 207
Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 59/149 (39%), Positives = 93/149 (62%), Gaps = 3/149 (2%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+T NVSRET E+L + L +W+ KINLVS +++++ W+RH++DS++++Q W+
Sbjct: 10 DTLNVSRETFERLTIYVDLLERWNPKINLVSRNSLKEIWVRHIQDSVQIYQCAEDAIHWV 69
Query: 77 DLGSGGGFPGIITSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG++ +I L+ES +K++FLR V ++ +V + RI+
Sbjct: 70 DLGSGGGFPGMVCAIMAKEEAPFTRFTLVESDQRKSAFLRNVARECGVDCRVVSRRIEMI 129
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
+ D++SARALADL TLL + L
Sbjct: 130 DPLR--ADILSARALADLGTLLSFCDRHL 156
>gi|21909776|ref|NP_664044.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS315]
gi|28896531|ref|NP_802881.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes SSI-1]
gi|71902936|ref|YP_279739.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS6180]
gi|25090462|sp|Q8K8K3|RSMG_STRP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123640486|sp|Q48V72|RSMG_STRPM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21903961|gb|AAM78847.1| putative glucose inhibited division protein B [Streptococcus
pyogenes MGAS315]
gi|28811785|dbj|BAC64714.1| putative glucose-inhibited division protein [Streptococcus pyogenes
SSI-1]
gi|71802031|gb|AAX71384.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS6180]
Length = 237
Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ + I
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|86147164|ref|ZP_01065480.1| glucose-inhibited division protein B [Vibrio sp. MED222]
gi|218711033|ref|YP_002418654.1| 16S rRNA methyltransferase GidB [Vibrio splendidus LGP32]
gi|254766912|sp|B7VN06|RSMG_VIBSL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85835048|gb|EAQ53190.1| glucose-inhibited division protein B [Vibrio sp. MED222]
gi|218324052|emb|CAV20414.1| glucose-inhibited division protein B [Vibrio splendidus LGP32]
Length = 210
Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
VS + +L + L KW+K NL S ++ ++H+ DS+ + H +ID
Sbjct: 16 ELEVSEKQRSQLVGYVELLNKWNKAYNLTSVRDPQEMMVKHILDSI-IVSTHLQGKRFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI SI E L++S K+ F++ V+ + V E Q
Sbjct: 75 VGTGPGLPGIPLSIMNPDCEFY---LLDSLGKRIRFIKQVIHELGIDNVVPIQSRVEEFQ 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A + ++E+ ++
Sbjct: 132 PEEKFDAVLSRAFASMTDMVEWCHHLPKEQ 161
>gi|152998467|ref|YP_001343302.1| methyltransferase GidB [Marinomonas sp. MWYL1]
gi|189045858|sp|A6W3T8|RSMG_MARMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150839391|gb|ABR73367.1| methyltransferase GidB [Marinomonas sp. MWYL1]
Length = 208
Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S ET++ L + + KW+K NL + VE H+ DSL ID+G+
Sbjct: 18 LSDETIQTLVKYLAMLEKWNKAYNLTAIRDVEQMISLHLLDSLATLPYIT-GDNIIDVGT 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PG++ +I L++S KK FL V + A E
Sbjct: 77 GPGLPGMVLAICYPEKR---FTLLDSNGKKTRFLTQVKMELGIHNATVANERVEKHSHQG 133
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D + +RA A L ++ ++ P +
Sbjct: 134 EYDHVISRAFASLQDMINWTLPLPKE 159
>gi|228924227|ref|ZP_04087498.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835445|gb|EEM80815.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 239
Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSI 74
+S LE+ + ++ ++W++K+NL + + E+ +++H D + + P
Sbjct: 13 KGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F E
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 135 ----APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|55820410|ref|YP_138852.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMG
18311]
gi|55822292|ref|YP_140733.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus
CNRZ1066]
gi|81559821|sp|Q5M1E6|RSMG_STRT1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81560991|sp|Q5M5Y2|RSMG_STRT2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55736395|gb|AAV60037.1| glucose-inhibited division protein B [Streptococcus thermophilus
LMG 18311]
gi|55738277|gb|AAV61918.1| glucose-inhibited division protein B [Streptococcus thermophilus
CNRZ1066]
gi|312277715|gb|ADQ62372.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
thermophilus ND03]
Length = 237
Score = 114 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVFQLHPYPSI 74
+++S++ ++ + ++ L ++W++KINL + + ++ +++H D + +
Sbjct: 14 GFDLSQKQKDQFQRYFELLVEWNEKINLTAITDKDEVFLKHFYDSLAPVLQGHIKNQSIQ 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
+D+G+G GFP + I +++ V +I+S NK+ +FL ++ + + R +
Sbjct: 74 LLDIGAGAGFPSLPIKILCPNLD---VTIIDSLNKRITFLNFLSDELGLSGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|315143570|gb|EFT87586.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2141]
Length = 291
Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 57 EEFRQLLAEKGIELTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 116
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 117 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLVN 173
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 174 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|228911322|ref|ZP_04075126.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
gi|228848340|gb|EEM93190.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
Length = 239
Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ + ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGIPLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|315026604|gb|EFT38536.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2137]
Length = 291
Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+
Sbjct: 57 EEFRQLLAEKGIELTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAF 116
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
F+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 117 FEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLAN 173
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 174 VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|332559702|ref|ZP_08414024.1| putative GidB, glucose inhibited division protein [Rhodobacter
sphaeroides WS8N]
gi|332277414|gb|EGJ22729.1| putative GidB, glucose inhibited division protein [Rhodobacter
sphaeroides WS8N]
Length = 205
Score = 113 bits (283), Expect = 7e-24, Method: Composition-based stats.
Identities = 64/157 (40%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HP 70
+L +VSRET EKL +F L KW+K +NL+ STVE W RH+ DS ++
Sbjct: 2 QESVLAQLDVSRETSEKLSHFVALVEKWNKAVNLIGRSTVESIWTRHILDSAQLRTHLAS 61
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +W+DLGSG GFPGI+ +I + L+ES +KA+FLR ++ V A
Sbjct: 62 QPRLWLDLGSGSGFPGIVVAIIAADESPESRFVLVESDQRKATFLRTACRELKLSASVLA 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ P DVISARALA L L + P L
Sbjct: 122 ARIESLPPQ--KADVISARALAALPDLCALAAPHLAP 156
>gi|319406396|emb|CBI80037.1| glucose inhibited division protein B [Bartonella sp. AR 15-3]
Length = 219
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 67/162 (41%), Positives = 99/162 (61%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
S+ + L +VSRET++ L F L ++W+ INL+S++T+ W RH+ DS ++
Sbjct: 4 SSEQKYQDTLKIIPSVSRETIKHLIEFETLVIQWNIHINLISATTIPILWTRHILDSAQI 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ L W DLGSGGGFP I+ +I L +GG ++L+ES KKA+FLR V+ +
Sbjct: 64 YPLKSQFLHWCDLGSGGGFPAIVIAIFLKEKKGGHIDLVESNGKKAAFLRNVIAQLNLPA 123
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V CRI++ + I D+++AR LA LDTLL + PWL QK
Sbjct: 124 TVHHCRIEDVYEKIKKPDILTARGLASLDTLLHFMSPWLTQK 165
>gi|229014648|ref|ZP_04171762.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
gi|229065141|ref|ZP_04200434.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|229136307|ref|ZP_04265054.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|229170185|ref|ZP_04297871.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|228613286|gb|EEK70425.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|228647179|gb|EEL03267.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|228716170|gb|EEL67889.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|228746659|gb|EEL96548.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
Length = 239
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L ++S LE+ ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGISLSSRQLEQFGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSVT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|94991792|ref|YP_599891.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS2096]
gi|166224618|sp|Q1JDG1|RSMG_STRPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94545300|gb|ABF35347.1| Methyltransferase gidB [Streptococcus pyogenes MGAS2096]
Length = 237
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ + I
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQAFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|322517440|ref|ZP_08070313.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
gi|322123922|gb|EFX95481.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
Length = 237
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVF 66
+++S++ ++ + ++ L ++W++KINL + + ++ +++H D +
Sbjct: 6 FYKALKELGFDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLAPVLQG 65
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G 125
+ +D+G+G GFP + I ++ V +I+S NK+ +FL + +
Sbjct: 66 HIKNQTIRLLDIGAGAGFPSLPMKILCPELD---VTIIDSLNKRINFLNLLADELDLSGV 122
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+++ARA+A + L E + P+L
Sbjct: 123 HFYHGRAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|315305256|ref|ZP_07875212.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
gi|313626378|gb|EFR95555.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
Length = 238
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 70/167 (41%), Gaps = 8/167 (4%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + ++ L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 1 MNPEQFKMALAEKGIELNEVQLKQFRDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSIS 60
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I +E +V+ ++ + L +
Sbjct: 61 AAFYVDFTEFRSICDVGAGAGFPSIPLKICFPHLEVSIVDSLKKRMTFLEALAE--KLVL 118
Query: 123 ARGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + + ++++ARA+A + L E P + +
Sbjct: 119 TNVHFYHDRAETFGQNKAHREKYNLVTARAVARMSVLSELCLPLVKK 165
>gi|312115376|ref|YP_004012972.1| methyltransferase GidB [Rhodomicrobium vannielii ATCC 17100]
gi|311220505|gb|ADP71873.1| methyltransferase GidB [Rhodomicrobium vannielii ATCC 17100]
Length = 226
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 66/159 (41%), Positives = 93/159 (58%), Gaps = 3/159 (1%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I A T+ VS ET+EKLE + L ++W K +NLV+ T+ W RH DS ++
Sbjct: 11 DIKSAAEFARTFRVSHETVEKLELYEKLLMQWQKAVNLVAPKTIPQIWQRHFADSAQLVA 70
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P W+DLGSGGGFPG+ +I + E V+L+ES +K +FL V ++T A +
Sbjct: 71 LAPGARTWVDLGSGGGFPGLAIAIMIANQKECACVHLVESNARKCAFLSEVARRTGAPAR 130
Query: 127 VFACRIQEAPQM--ITTCDVISARALADLDTLLEYSFPW 163
V RI +A M + DV++ARALA LD LLE + P+
Sbjct: 131 VHNMRIADAAAMGAVPVADVVTARALASLDALLELALPF 169
>gi|239637281|ref|ZP_04678268.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
gi|239597118|gb|EEQ79628.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
Length = 239
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S E+ + +Y L ++W++K+NL S + + +++H DS+ +
Sbjct: 6 LSEKLKEHNIELSNTQKEQFQTYYQLLVEWNEKMNLTSITDEHEVYLKHFYDSITPSFYY 65
Query: 70 PYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++
Sbjct: 66 DFKGSLSICDVGAGAGFPSIPLKIIFPELK---VTIVDSLNKRIQFLNHLADALGLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P +
Sbjct: 123 FVHDRAETFGKGDYRESYDIVTARAVARLTVLSELCLPLAKK 164
>gi|332971195|gb|EGK10158.1| glucose inhibited division protein B [Desmospora sp. 8437]
Length = 242
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ E L+ +Y L ++ +KK+NL + + ++ +++H D +L ID+
Sbjct: 19 LNGEQLDLFYRYYHLLVEGNKKMNLTAITDEKEVFVKHFFDSLTLASHLSFAEVDSLIDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA-- 135
G+G GFPGI I + + L++S NK+ +F++ V + R + R +EA
Sbjct: 79 GTGAGFPGIPLKIAYPHLR---LVLLDSLNKRVTFMKESVAELGLRGVECVHGRAEEAAR 135
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
P + DV +ARA+A L+ L EY P++
Sbjct: 136 KPMFRESFDVATARAVARLNVLAEYCLPFVR 166
>gi|319780614|ref|YP_004140090.1| methyltransferase GidB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166502|gb|ADV10040.1| methyltransferase GidB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 210
Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats.
Identities = 63/144 (43%), Positives = 99/144 (68%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F +F KW++ INLV+ ST D W RH+ DS ++ ++ P + W+D+GS
Sbjct: 16 VSRETFDRLVAFEQMFQKWNRSINLVAQSTSGDVWQRHILDSAQLARIEPAATRWVDIGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ +G ++L+ES KKASFL+ V+ + + +V A RI ++ +++
Sbjct: 76 GGGFPGLVMAFLLAERDGASIDLVESNRKKASFLQTVIGQFSLPARVVARRIDDSHALVS 135
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T +++ARALA L TLL+ S PWL
Sbjct: 136 TPQIVTARALAPLSTLLDLSAPWL 159
>gi|19745444|ref|NP_606580.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS8232]
gi|139474384|ref|YP_001129100.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes str.
Manfredo]
gi|306827980|ref|ZP_07461247.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
gi|23821582|sp|Q8P2K1|RSMG_STRP8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224622|sp|A2RGB9|RSMG_STRPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19747557|gb|AAL97079.1| putative glucose-inhibited division protein [Streptococcus pyogenes
MGAS8232]
gi|134272631|emb|CAM30898.1| methyltransferase GidB [Streptococcus pyogenes str. Manfredo]
gi|304429899|gb|EFM32941.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
Length = 237
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ + I
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|254672749|emb|CBA06758.1| glucose inhibited division protein B [Neisseria meningitidis
alpha275]
Length = 207
Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTGHLLKD 159
>gi|238854396|ref|ZP_04644738.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260665089|ref|ZP_05865939.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
gi|282931800|ref|ZP_06337285.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
gi|238833018|gb|EEQ25313.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260561143|gb|EEX27117.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
gi|281304107|gb|EFA96224.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
Length = 239
Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + ++++ +++ +Y ++ ++ +NL + +E+ +++H DSL F
Sbjct: 4 ELFIKQLAEKGFALNQKQIDQFSKYYKKLIEVNEYVNLTRITDLEEVYLKHFYDSLTPFL 63
Query: 68 LHPYPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+P D+G+G GFP I I + ++ +V+ + + K + L + +
Sbjct: 64 EYPDLFKKGHICDVGAGAGFPSIPIKILVPEMQLAIVDSLNKRLKFLADLTADLD--LEQ 121
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ + D+++ARA+A++ TL EY P + +
Sbjct: 122 VELIHGRAEDVGQNEKYREKFDLVTARAVANMATLSEYCLPLVKK 166
>gi|308071637|ref|YP_003873242.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus polymyxa E681]
gi|305860916|gb|ADM72704.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Paenibacillus polymyxa E681]
Length = 240
Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 6 SNSI---LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
++I + ++ ++ LE+ E +Y + ++W++K+NL + + + +H DS
Sbjct: 1 MDAIQQQFKQRLAEHSIVINDSQLEQFETYYRVLVEWNEKMNLTGITERDAVYTKHFYDS 60
Query: 63 LRVFQLHPYPSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + P + D+GSG GFPGI I I+ + +++S NK+ FL +VV++
Sbjct: 61 LSLAFYVPLNDVGSLADIGSGAGFPGIPLKICFPQIQ---LTIVDSLNKRIQFLAHVVEQ 117
Query: 121 TAA-RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R +E P + D+++ARA+A L L E+ P++ +
Sbjct: 118 LGLENVELIHSRAEELGRKPGYRDSYDLVTARAVARLAVLNEFCLPFVRE 167
>gi|171780281|ref|ZP_02921185.1| hypothetical protein STRINF_02069 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281629|gb|EDT47064.1| hypothetical protein STRINF_02069 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 237
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++++ ++ E ++ L ++W++KINL + + E +++H DS+
Sbjct: 4 EEFYDKLRQQGFDLTDTQKKQFERYFELLVEWNQKINLTAITDKEGVYLKHFYDSIAPVL 63
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + D+G+G GFP I I +I+ V +I+S NK+ +FL + +
Sbjct: 64 QGKITNQDVRLLDIGAGAGFPSIPIKILCPAID---VTIIDSLNKRINFLNRLADELGLD 120
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+++ARA+A L L E + P+L
Sbjct: 121 GVHFYHGRAEDYGQDKAFRASYDIVTARAVARLQVLTELTIPFLK 165
>gi|260467201|ref|ZP_05813378.1| methyltransferase GidB [Mesorhizobium opportunistum WSM2075]
gi|259029054|gb|EEW30353.1| methyltransferase GidB [Mesorhizobium opportunistum WSM2075]
Length = 208
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 66/144 (45%), Positives = 98/144 (68%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F +F KW++ INLV+ ST D W RH+ DS ++ +L P W+D+GS
Sbjct: 14 VSRETFDRLVAFEEIFQKWNRSINLVAQSTSGDVWQRHILDSAQLARLEPDAKRWVDIGS 73
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ +G ++L+ES KKASFL+ VV + + +V A RI E+ +++
Sbjct: 74 GGGFPGLVMAFLLAERDGASIDLVESNRKKASFLQAVVGQFSLPARVVARRIDESHALVS 133
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T +++ARALA L TLL+ S PWL
Sbjct: 134 TPQIVTARALASLPTLLDLSAPWL 157
>gi|312862573|ref|ZP_07722815.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
gi|311101978|gb|EFQ60179.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
Length = 237
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVF 66
+++S++ ++ + ++ L ++W++KINL + + ++ +++H D +
Sbjct: 6 FYKALKELGFDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLAPVLQG 65
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G 125
+ +D+G+G GFP + I ++ V +I+S NK+ +FL + +
Sbjct: 66 HIKNQTIRLLDIGAGAGFPSLPMKILCPELD---VTIIDSLNKRINFLNLLADELDLSGV 122
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+++ARA+A + L E + P+L
Sbjct: 123 HFYHGRAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|302672306|ref|YP_003832266.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
gi|302396779|gb|ADL35684.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
Length = 247
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHP 70
L ++NV S + LE+ + +Y L +KW++ +NL + + +D H DS+ + F
Sbjct: 13 LKSFNVELSDKQLEQFDKYYELLIKWNEVMNLTAITDFDDVCKLHFVDSISAVQYFDFSD 72
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR----GK 126
ID+G+G GFPGI I ++ + L +S NK+ FL V+
Sbjct: 73 KEYSLIDIGTGAGFPGIPLKIVFPNL---HITLFDSLNKRLKFLDEVIDTLGLNESGSIV 129
Query: 127 VFACRIQ------EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R + + + D++ +RA+A++ TL EY P++
Sbjct: 130 TLHGRAEDYSSSKSKDSLRESFDLVVSRAVANMSTLCEYCLPYVK 174
>gi|84684649|ref|ZP_01012550.1| glucose-inhibited division protein B [Maritimibacter alkaliphilus
HTCC2654]
gi|84667628|gb|EAQ14097.1| glucose-inhibited division protein B [Rhodobacterales bacterium
HTCC2654]
Length = 206
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQL 68
+ + L +VSRET +L+ F L KW++ INLVS+ST++D W RH DS + +
Sbjct: 1 MSKSAFLEAVSVSRETERRLDTFAELLTKWNRHINLVSASTLKDLWSRHFLDSAQLLSLA 60
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKV 127
+W+D+G+GGGFPGI+ +I + + V IES +KA+FLR V ++ +V
Sbjct: 61 EGRSRLWLDVGTGGGFPGIVVAIIAAEAQPDLRVRCIESDQRKATFLRTVARECGVSVEV 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ A M DVISARALA LD LL Y+ L
Sbjct: 121 LSERVERADPM--NADVISARALAPLDDLLAYAQRHLKP 157
>gi|227823854|ref|YP_002827827.1| 16S rRNA methyltransferase GidB [Sinorhizobium fredii NGR234]
gi|254766900|sp|C3MB65|RSMG_RHISN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|227342856|gb|ACP27074.1| methyltransferase GidB [Sinorhizobium fredii NGR234]
Length = 214
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 87/148 (58%), Positives = 110/148 (74%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
VSRETL+KLE+F LF KW+K INLV+ ST+ED W RH DSL+VF+L P+P W+
Sbjct: 10 KALRVSRETLDKLEHFAGLFQKWAKSINLVAPSTLEDLWQRHFVDSLQVFRLSPFPKTWV 69
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLGSGGGFPG+IT+I LS G V+L+ES NKKA+FLR + +T ARG V R+++AP
Sbjct: 70 DLGSGGGFPGVITAICLSEHADGWVHLVESNNKKAAFLRVALNETGARGSVHPIRVEQAP 129
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
+I C+ ISARALADL LL+YS PW+
Sbjct: 130 SVIPRCEAISARALADLTQLLDYSAPWM 157
>gi|34496117|ref|NP_900332.1| 16S rRNA methyltransferase GidB [Chromobacterium violaceum ATCC
12472]
gi|55976481|sp|Q7P0A5|RSMG_CHRVO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|34101971|gb|AAQ58338.1| glucose inhibited division protein B [Chromobacterium violaceum
ATCC 12472]
Length = 209
Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ ++ +E L+ + L +KW++ NL + E H+ DSL +
Sbjct: 8 LKQGLAQLALELTEPQVELLQRYLALLVKWNQTYNLTAIRQEERMVSYHLLDSLSLVPHL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+GSGGG PGI T+I ++ V L++S +KK +FLR VV +
Sbjct: 68 AGGTRMLDVGSGGGMPGIPTAIARPDLQ---VALLDSNHKKTTFLRQVVLELGLPNVQVV 124
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA Q D I++RA ++L ++ + +
Sbjct: 125 TDRVEAYQPEQKFDRITSRAFSELSEFVKLTRHLMAD 161
>gi|228476624|ref|ZP_04061306.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
gi|228251819|gb|EEK10884.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
Length = 237
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVF 66
+++S++ ++ + ++ L ++W++KINL + + ++ +++H D +
Sbjct: 6 FYKALKELGFDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLAPVLQG 65
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G 125
+ +D+G+G GFP + I ++ V +I+S NK+ +FL + +
Sbjct: 66 HIKNQTIRLLDIGAGAGFPSLPMKILCPDLD---VTIIDSLNKRINFLNLLADELELSGV 122
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+++ARA+A + L E + P+L
Sbjct: 123 HFYHGRAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|210614310|ref|ZP_03290158.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
gi|210150726|gb|EEA81735.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
Length = 237
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ I ++ E + + FY L ++W+K +NL + E+ +H DSL +
Sbjct: 1 MSQIFENKLKELGIVLNDEQKRQFDSFYELLVEWNKVMNLTGITEYEEVNEKHFVDSLSI 60
Query: 66 F--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
ID+G+G GFPGI I ++ V L++S NK+ FL V+++
Sbjct: 61 TKAIDMNCVDNLIDIGTGAGFPGIPLKIAFPHLK---VVLLDSLNKRIKFLNTVIEELEL 117
Query: 124 -RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+ +RA+A+L TL EY P+++
Sbjct: 118 IDIETIHGRAEDFAKQGEYREQFDLCVSRAVANLSTLSEYCMPYIH 163
>gi|163814997|ref|ZP_02206384.1| hypothetical protein COPEUT_01150 [Coprococcus eutactus ATCC 27759]
gi|158449680|gb|EDP26675.1| hypothetical protein COPEUT_01150 [Coprococcus eutactus ATCC 27759]
Length = 236
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
+S + L++ +Y + ++W+ +NL + + +D I+H DSL +++
Sbjct: 12 GLELSEKQLQQFSRYYDILVEWNSFMNLTAITDRDDVIIKHFADSLLLYKYKDLHDNLSV 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+G+G GFPGI I ++ V L++S NK+ +FL V+++ + R ++
Sbjct: 72 LDVGTGAGFPGIPLKIAFPELK---VTLMDSLNKRLNFLNEVIKELELDNVETVHSRAED 128
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
P D++ +RA+A+L TL E+ P+
Sbjct: 129 GGKNPLYREKYDLVVSRAVANLATLSEWCLPFTK 162
>gi|304388996|ref|ZP_07371043.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis ATCC 13091]
gi|304337130|gb|EFM03317.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis ATCC 13091]
Length = 207
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRLDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|331083512|ref|ZP_08332624.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404205|gb|EGG83753.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
Length = 240
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y +IL ++ E ++ +Y L ++W+K +NL + E+ ++H
Sbjct: 1 MNYDL--TILEEGCKEYGIQLNEEQKKQFVQYYELLVEWNKVMNLTGITDFEEVLLKHFV 58
Query: 61 DSLRVF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + S ID+G+G GFPGI I ++ + L++S NK+ +FL V+
Sbjct: 59 DSLSIVKGMDMSKISTCIDVGTGAGFPGIPLKIAFPHLQ---ITLLDSLNKRLNFLNEVI 115
Query: 119 QKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ G + R ++A + D+ +RA++ L +L EY P++ +
Sbjct: 116 EQLGLTGIQTVHGRAEDAARKAEYREKYDLSVSRAVSRLASLSEYCMPYVKE 167
>gi|322374558|ref|ZP_08049072.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
gi|321280058|gb|EFX57097.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
Length = 237
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 4 ETFYSLLAEQNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPIL 63
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 64 QGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLD 120
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ DV++ARA+A + L E + P+L
Sbjct: 121 GVHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLK 165
>gi|261368857|ref|ZP_05981740.1| 16S rRNA methyltransferase GidB [Subdoligranulum variabile DSM
15176]
gi|282569043|gb|EFB74578.1| 16S rRNA methyltransferase GidB [Subdoligranulum variabile DSM
15176]
Length = 234
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 9 ILRANYLLN-----TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++ L +S L+ L+ + L + +++K+NL + ++ E RH DSL
Sbjct: 1 MIDKERLAQKCSTWNIALSPAQLDLLDRYAELLVDYNQKVNLTAITSPEGIEDRHFADSL 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+D+G+G GFPG++ I ++ + L+E K+ FL+Y+ +
Sbjct: 61 LFAAQPEVTGKLVDVGTGAGFPGVVAKIYKPDLQ---LTLMEPTGKRVDFLKYLCGELGL 117
Query: 124 RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G FA E DV ARA+A L L EY P + Q
Sbjct: 118 TGIEFAKERAEEAARKIWREQFDVACARAVAALPVLCEYCLPLVRQ 163
>gi|295101871|emb|CBK99416.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
L2-6]
Length = 235
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 9 ILRANYLLN-----TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++ N L ++ L++L+ F + +++++K+NL + + E +H DSL
Sbjct: 1 MIDKNRLEQKCSTWNIALTGTQLDRLDAFAEILVEYNQKVNLTAITDPEGIEDKHFLDSL 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+D+G+G GFPGI+T I +E + L+E K+ FL+Y +
Sbjct: 61 LFASQPEVAGKMVDVGAGAGFPGIVTKIFKPELE---LTLMEPTGKRVEFLKYACGQLGL 117
Query: 124 RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
G FA E D+ SARA+A L L EY P +
Sbjct: 118 TGVEFAKERAEEAARKAWREQFDLASARAVAALPVLAEYCLPLVK 162
>gi|310644869|ref|YP_003949628.1| ribosomal RNA small subunit methyltransferase g [Paenibacillus
polymyxa SC2]
gi|309249820|gb|ADO59387.1| Ribosomal RNA small subunit methyltransferase G [Paenibacillus
polymyxa SC2]
Length = 240
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 6 SNSI---LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
++I + ++ ++ LE+ E +Y + ++W++K+NL + E + +H DS
Sbjct: 1 MDAIQQQFKQRLAEHSIVINDSQLEQFETYYRVLVEWNEKMNLTGITEREAVYTKHFYDS 60
Query: 63 LRVFQLHPYPSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ + P + D+GSG GFPGI I I+ + +++S NK+ FL +VV++
Sbjct: 61 VSLAFYVPLNDVESLADIGSGAGFPGIPLKICFPHIQ---LTIVDSLNKRIQFLAHVVEQ 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R +E + + D+++ARA+A L L E+ P++ +
Sbjct: 118 LGLENVELIHSRAEELGRKAGYRDSYDLVTARAVARLAVLNEFCLPFVRE 167
>gi|148994096|ref|ZP_01823436.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|168489112|ref|ZP_02713311.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|168493205|ref|ZP_02717348.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|221231973|ref|YP_002511125.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225854749|ref|YP_002736261.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|254766905|sp|B8ZJU9|RSMG_STRPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766907|sp|C1CEP0|RSMG_STRZJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147927449|gb|EDK78478.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|183572467|gb|EDT92995.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|183576802|gb|EDT97330.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|220674433|emb|CAR68986.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225723304|gb|ACO19157.1| methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|332073624|gb|EGI84103.1| methyltransferase GidB [Streptococcus pneumoniae GA17570]
gi|332203134|gb|EGJ17202.1| methyltransferase GidB [Streptococcus pneumoniae GA47901]
Length = 237
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|260103056|ref|ZP_05753293.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
gi|260083146|gb|EEW67266.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
Length = 240
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + E+ + ++ ++ ++ +NL + + +++H DS+
Sbjct: 1 MNPEKFILELSKHNFVLTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ D+G+G GFP I I S++ V +++S K+ +FL+ ++ K
Sbjct: 61 PLFVFGDVFKDGATLCDVGAGAGFPSIPLKILKPSLK---VTIVDSLAKRLTFLKDLIAK 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 118 LGLDNVELVHGRAEDVGQNKLYREKFDIVTARAVAKMSVLSEYCLPLVKK 167
>gi|260588825|ref|ZP_05854738.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
gi|260540604|gb|EEX21173.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
Length = 240
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y +IL ++ E ++ +Y L ++W+K +NL + E+ ++H
Sbjct: 1 MNYDL--TILEEGCKEYGIQLNEEQKKQFVQYYELLIEWNKVMNLTGITDFEEVLLKHFV 58
Query: 61 DSLRVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + + S ID+G+G GFPGI I ++ + L++S NK+ +FL V+
Sbjct: 59 DSLSIAKGLDMTKISTCIDVGTGAGFPGIPLKIAFPHLQ---ITLLDSLNKRLNFLNEVI 115
Query: 119 QKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+K G + R ++A + D+ +RA++ L +L EY P++
Sbjct: 116 EKLGLSGIQTVHGRAEDAARKAEHREKYDLSVSRAVSRLASLSEYCMPYVK 166
>gi|283768650|ref|ZP_06341562.1| 16S rRNA methyltransferase GidB [Bulleidia extructa W1219]
gi|283105042|gb|EFC06414.1| 16S rRNA methyltransferase GidB [Bulleidia extructa W1219]
Length = 229
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+E + + L +W++++NL + + ++ +H D + W D+GSG GFP
Sbjct: 19 IESFQRYASLLQEWNERMNLTAITEEKEIIEKHFLDCILPLHHSVIQGHWADVGSGAGFP 78
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ-MITTCD 143
G++ I +E LIE K+ FLR+V+ + + KV R ++ + D
Sbjct: 79 GLVWKIMKPELEM---TLIEPTGKRCQFLRHVINELQLEKIKVVNERAEDYAKLHREEFD 135
Query: 144 VISARALADLDTLLEYSFPWLY 165
++ARA+++L L E P +
Sbjct: 136 GVTARAVSNLPLLSELCIPLIK 157
>gi|59802110|ref|YP_208822.1| glucose-inhibited division protein B [Neisseria gonorrhoeae FA
1090]
gi|194099969|ref|YP_002003108.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae NCCP11945]
gi|239997976|ref|ZP_04717900.1| glucose-inhibited division protein B [Neisseria gonorrhoeae 35/02]
gi|240015045|ref|ZP_04721958.1| glucose-inhibited division protein B [Neisseria gonorrhoeae DGI18]
gi|240017494|ref|ZP_04724034.1| glucose-inhibited division protein B [Neisseria gonorrhoeae FA6140]
gi|240081635|ref|ZP_04726178.1| glucose-inhibited division protein B [Neisseria gonorrhoeae FA19]
gi|240113916|ref|ZP_04728406.1| glucose-inhibited division protein B [Neisseria gonorrhoeae MS11]
gi|240116648|ref|ZP_04730710.1| glucose-inhibited division protein B [Neisseria gonorrhoeae PID18]
gi|240118871|ref|ZP_04732933.1| glucose-inhibited division protein B [Neisseria gonorrhoeae PID1]
gi|240122114|ref|ZP_04735076.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
PID24-1]
gi|240124408|ref|ZP_04737364.1| glucose-inhibited division protein B [Neisseria gonorrhoeae PID332]
gi|240124720|ref|ZP_04737606.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
SK-92-679]
gi|240129085|ref|ZP_04741746.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
SK-93-1035]
gi|254494669|ref|ZP_05107840.1| methyltransferase gidB [Neisseria gonorrhoeae 1291]
gi|260439592|ref|ZP_05793408.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae DGI2]
gi|268593826|ref|ZP_06127993.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae 35/02]
gi|268597731|ref|ZP_06131898.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae FA19]
gi|268599978|ref|ZP_06134145.1| methyltransferase gidB [Neisseria gonorrhoeae MS11]
gi|268602316|ref|ZP_06136483.1| methyltransferase gidB [Neisseria gonorrhoeae PID18]
gi|268604578|ref|ZP_06138745.1| methyltransferase gidB [Neisseria gonorrhoeae PID1]
gi|268683035|ref|ZP_06149897.1| methyltransferase gidB [Neisseria gonorrhoeae PID332]
gi|268683297|ref|ZP_06150159.1| methyltransferase gidB [Neisseria gonorrhoeae SK-92-679]
gi|268687464|ref|ZP_06154326.1| methyltransferase gidB [Neisseria gonorrhoeae SK-93-1035]
gi|291042830|ref|ZP_06568571.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae DGI2]
gi|293398150|ref|ZP_06642355.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae F62]
gi|75432367|sp|Q5F5X7|RSMG_NEIG1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238693231|sp|B4RR25|RSMG_NEIG2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|59719005|gb|AAW90410.1| putative glucose inhibited division protein B [Neisseria
gonorrhoeae FA 1090]
gi|193935259|gb|ACF31083.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
NCCP11945]
gi|226513709|gb|EEH63054.1| methyltransferase gidB [Neisseria gonorrhoeae 1291]
gi|268547215|gb|EEZ42633.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae 35/02]
gi|268551519|gb|EEZ46538.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae FA19]
gi|268584109|gb|EEZ48785.1| methyltransferase gidB [Neisseria gonorrhoeae MS11]
gi|268586447|gb|EEZ51123.1| methyltransferase gidB [Neisseria gonorrhoeae PID18]
gi|268588709|gb|EEZ53385.1| methyltransferase gidB [Neisseria gonorrhoeae PID1]
gi|268623319|gb|EEZ55719.1| methyltransferase gidB [Neisseria gonorrhoeae PID332]
gi|268623581|gb|EEZ55981.1| methyltransferase gidB [Neisseria gonorrhoeae SK-92-679]
gi|268627748|gb|EEZ60148.1| methyltransferase gidB [Neisseria gonorrhoeae SK-93-1035]
gi|291013264|gb|EFE05230.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae DGI2]
gi|291611413|gb|EFF40483.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae F62]
gi|317165420|gb|ADV08961.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 207
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGPDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FLR + +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLRQAAIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVVTSRAFAELADFVSWTAHLLKD 159
>gi|288906021|ref|YP_003431243.1| Methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|306832061|ref|ZP_07465215.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732747|emb|CBI14321.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|304425500|gb|EFM28618.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 237
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ ++ ++ E ++ L ++W++KINL + + E +++H DS+
Sbjct: 4 EEFYKKLSQQGFELTDTQKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIAPVL 63
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP I I I+ V +I+S NK+ +FL + + +
Sbjct: 64 QGKITNQAIRLLDIGAGAGFPSIPIKILCPDID---VTIIDSLNKRINFLNLLADELGLK 120
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+++ARA+A L L E + P+L
Sbjct: 121 GVHFYHGRAEDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLK 165
>gi|218551274|ref|YP_002385066.1| 16S rRNA methyltransferase GidB [Escherichia fergusonii ATCC 35469]
gi|226725359|sp|B7LK85|RSMG_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218358816|emb|CAQ91473.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
fergusonii ATCC 35469]
Length = 207
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSSLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLDN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A LD +L +
Sbjct: 117 ITPVQSRVEVFPAEPPFDGVISRAFASLDDMLNWCHHL 154
>gi|331089221|ref|ZP_08338123.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
gi|330405773|gb|EGG85302.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
Length = 239
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
N++ E+ + +Y + ++W+ +NL + ++ ++H DSL + + I
Sbjct: 16 NINLTEHQKEQFDRYYEMLVEWNNVMNLTGITDYDEVNLKHFTDSLTLVRNIDMNKIDAV 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFPG+ I I V L++S NK+ FL V+++ + R ++
Sbjct: 76 IDIGTGAGFPGLPIKIAFPHI---HVVLLDSLNKRIKFLNAVIEELDLADVETLHGRAED 132
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ +RA+A+L TL EY P++ +
Sbjct: 133 YAKRKEYREQFDLCVSRAVANLSTLSEYCIPFVKR 167
>gi|291543433|emb|CBL16542.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus sp. 18P13]
Length = 235
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIW 75
++ E EKL+ + +++++K+NL + + ED I+H DS+ + + P +
Sbjct: 16 ELELTPECYEKLDCYASFLVEYNEKVNLTALTAPEDVLIKHFLDSMLLTKYIEIPLGAAL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
ID+G+G GFP + + + V L++S NK+ FL+ + +K + R +EA
Sbjct: 76 IDVGTGAGFPSVPVLLLR---QDLHVTLLDSLNKRIVFLQLLAEKLGLEVRCIHGRAEEA 132
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P++ DV +ARA+A L TL EY P++
Sbjct: 133 ARKPELREKFDVATARAVAALPTLAEYCLPFVKP 166
>gi|320547408|ref|ZP_08041696.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
gi|320447953|gb|EFW88708.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
Length = 237
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+++S ++ E ++ L ++W++KINL + + E +++H DS+ + I
Sbjct: 14 GFDLSDTQKKQFERYFELLVEWNQKINLTAITDKEGVYLKHFYDSIAPVLQGKITNQEIR 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP I I I+ V +I+S NK+ +FL + ++ + R +
Sbjct: 74 LLDIGAGAGFPSIPIKILCPDID---VTIIDSLNKRINFLNLLAEELGLDGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q + D+++ARA+A L L E + P+L
Sbjct: 131 DYGQDKVFRASYDIVTARAVARLQVLTELTIPFLK 165
>gi|319404910|emb|CBI78511.1| glucose inhibited division protein B [Bartonella rochalimae ATCC
BAA-1498]
Length = 219
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 8/166 (4%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
KY D I+ + VSRET++ L F L ++W+ INL+S++T+ W RH+ D
Sbjct: 8 KYQDILEIIPS--------VSRETMKHLIEFESLVIQWNIHINLISATTIPVLWKRHILD 59
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S +++ L W DLGSGGGFP I+ +I L +GG ++L+ES KKA+FL+ V+ K
Sbjct: 60 SAQIYPLKSQFLHWCDLGSGGGFPAIVLAIFLKEKKGGHIDLVESNGKKAAFLQNVIAKL 119
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V CRI++ + I T D+++AR LA LDTLL PWL QK
Sbjct: 120 NLPATVHHCRIEDVYKKIKTPDILTARGLASLDTLLHLMSPWLTQK 165
>gi|161508052|ref|YP_001578019.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DPC 4571]
gi|172048356|sp|A8YXD7|RSMG_LACH4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160349041|gb|ABX27715.1| Glucose inhibited division protein B [Lactobacillus helveticus DPC
4571]
Length = 240
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + E+ + ++ ++ ++ +NL + + +++H DS+
Sbjct: 1 MNPEKFILELSKHNFVLTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ D+G+G GFP I I S++ V +++S K+ +FL+ ++ K
Sbjct: 61 PLFVFGDVFKDGATLCDVGAGAGFPSIPLKILKPSLK---VTIVDSLAKRLTFLKDLIAK 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 118 LGLDNVELVHGRAEDVGQNKLYREKFDIVTARAVAKMSVLSEYCLPLVKK 167
>gi|156743304|ref|YP_001433433.1| 16S rRNA methyltransferase GidB [Roseiflexus castenholzii DSM
13941]
gi|189040817|sp|A7NPB9|RSMG_ROSCS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156234632|gb|ABU59415.1| methyltransferase GidB [Roseiflexus castenholzii DSM 13941]
Length = 234
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ +LR + + +E+ + W+ ++NL S + + RH DSLR
Sbjct: 1 MDELLRIAT-SWGLRLDQRQIEQFARYSAELRAWNMRVNLTSITDEREIVTRHFLDSLRC 59
Query: 66 FQLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
ID+GSG GFPG+ I + V L+ES KKA+FL+++V R
Sbjct: 60 ALSWGDTPSRLIDIGSGAGFPGLPLKILHPEL---HVTLVESVGKKAAFLQHIVAVLDLR 116
Query: 125 ----GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + PQ DV++ARA+A+L TL+EY P
Sbjct: 117 DVTVVTARAEVVGRDPQHREQYDVVTARAVAELATLVEYGLPL 159
>gi|15901145|ref|NP_345749.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae TIGR4]
gi|111658512|ref|ZP_01409178.1| hypothetical protein SpneT_02000339 [Streptococcus pneumoniae
TIGR4]
gi|148998925|ref|ZP_01826360.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|149019281|ref|ZP_01834643.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|168484499|ref|ZP_02709451.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|168487454|ref|ZP_02711962.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|168575740|ref|ZP_02721655.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194397570|ref|YP_002037888.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225859081|ref|YP_002740591.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225860884|ref|YP_002742393.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230786|ref|ZP_06964467.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254276|ref|ZP_06977862.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|307067934|ref|YP_003876900.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|20177896|sp|Q97QD4|RSMG_STRPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797832|sp|B5E522|RSMG_STRP4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766904|sp|C1C7R5|RSMG_STRP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766909|sp|C1CR21|RSMG_STRZT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14972770|gb|AAK75389.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TIGR4]
gi|147755235|gb|EDK62287.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|147931151|gb|EDK82130.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|172042251|gb|EDT50297.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|183569712|gb|EDT90240.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|183578267|gb|EDT98795.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194357237|gb|ACF55685.1| methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225722107|gb|ACO17961.1| methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225726989|gb|ACO22840.1| methyltransferase GidB [Streptococcus pneumoniae Taiwan19F-14]
gi|301794360|emb|CBW36788.1| methyltransferase GidB [Streptococcus pneumoniae INV104]
gi|306409471|gb|ADM84898.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|327389519|gb|EGE87864.1| methyltransferase GidB [Streptococcus pneumoniae GA04375]
gi|332200730|gb|EGJ14802.1| methyltransferase GidB [Streptococcus pneumoniae GA41317]
gi|332201749|gb|EGJ15819.1| methyltransferase GidB [Streptococcus pneumoniae GA47368]
Length = 237
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|254466952|ref|ZP_05080363.1| methyltransferase GidB [Rhodobacterales bacterium Y4I]
gi|206687860|gb|EDZ48342.1| methyltransferase GidB [Rhodobacterales bacterium Y4I]
Length = 205
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/157 (43%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ +L NVSRETL +LE F + KW+ KINLVS S++E W RH+ DS++VF+
Sbjct: 1 MNDKRILEELNVSRETLARLEAFEQVIKKWNPKINLVSKSSLELLWSRHIADSVQVFRCV 60
Query: 70 PYPSIWIDLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P W+D+GSGGGFPG+I SI LIES +K++FLR ++ A+ V
Sbjct: 61 DAPDHWVDIGSGGGFPGLIVSILAADEAPEMKTTLIESDQRKSAFLRTAARECGAKVTVI 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ RI+ A +V+SARALADL LLE+S L
Sbjct: 121 SKRIEHADPQ--NAEVLSARALADLSLLLEFSERHLA 155
>gi|92115736|ref|YP_575465.1| 16S rRNA methyltransferase GidB [Nitrobacter hamburgensis X14]
gi|122418937|sp|Q1QRZ2|RSMG_NITHX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91798630|gb|ABE61005.1| methyltransferase GidB [Nitrobacter hamburgensis X14]
Length = 260
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L+ + L ++W K NL++SST+ W RH+ DSL++ L P W D GS
Sbjct: 53 VSRETEARLDAYVDLLVQWQTKTNLIASSTLPQLWTRHIADSLQLLALAPQAKRWADFGS 112
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQMI 139
GGGFPG++ + L+ +EG ++L+E KKA+FLR V+ T G + I + ++
Sbjct: 113 GGGFPGVVLACALADVEGARIDLVERNAKKAAFLREAVRITGTPGVIHPMDIGDYVDRLD 172
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L LL ++ P + Q
Sbjct: 173 GRIDCVTARALAPLQVLLGFAEPLVKQ 199
>gi|325679062|ref|ZP_08158656.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
gi|324109186|gb|EGC03408.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
Length = 233
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 9 ILRANYL-LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++ N ++ E +L+ + + + ++ +NL + + E +H DS+ F
Sbjct: 1 MIDFKIFDENGIALTAEQTGRLDKYAEMLCERNEHVNLTAITDPEGIAEKHFFDSIYPFT 60
Query: 68 LHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P ID+G+G GFP + + + L++S NK+ +FL+ + +
Sbjct: 61 LFELPQGASLIDVGTGAGFPSCPLKVFR---DDISLTLLDSLNKRVNFLQGISDALSLDA 117
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
K R +E P D+ +ARA+A+L L EY P++
Sbjct: 118 KCVHGRAEEFGKKPDYREQFDIATARAVANLRDLCEYCLPFVK 160
>gi|197302260|ref|ZP_03167319.1| hypothetical protein RUMLAC_00987 [Ruminococcus lactaris ATCC
29176]
gi|197298691|gb|EDY33232.1| hypothetical protein RUMLAC_00987 [Ruminococcus lactaris ATCC
29176]
Length = 247
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
++ E+ + +Y L ++W+K +NL + E+ ++H D S+ +
Sbjct: 22 GIELNEHQKEQFDQYYELLVEWNKVMNLTGITEYEEVNLKHFTDSLSIARVKDMHQVQSV 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFPGI I +E V L++S NK+ FL V++ + + R ++
Sbjct: 82 IDIGTGAGFPGIPLKIVYPELE---VVLLDSLNKRIKFLDEVIRTLGLEKIRTIHGRAED 138
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ +RA+A+L TL EY P++
Sbjct: 139 FAKKKEYRECFDLCVSRAVANLATLSEYCLPFVK 172
>gi|160941472|ref|ZP_02088807.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
gi|158435618|gb|EDP13385.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
Length = 259
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 27/180 (15%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ L +S + LE+ +Y + ++ +K +NL + + D +H DSL +F++
Sbjct: 9 MDRELGLLGIKLSEKQLEQFFTYYEMLVEKNKVMNLTAITDETDVVSKHFSDSLSLFRVL 68
Query: 70 PYPSI--------------------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
ID+G+G GFPGI I I+ + L++S NK
Sbjct: 69 KRVMDSGDGCDGSRVYEEELLEGKSVIDVGTGAGFPGIPLKIAFPGIK---LTLLDSLNK 125
Query: 110 KASFLRYVVQKTAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ FL V + R ++ + D+ +RA+A+L +L EY P++
Sbjct: 126 RVKFLEEVCDALELKNVEFIHGRAEDIGRQKEHREMYDLCVSRAVANLASLSEYCMPFVK 185
>gi|317472410|ref|ZP_07931735.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
gi|316900130|gb|EFV22119.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
Length = 236
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIW 75
++ L + E +Y L + +K +NL + + ED ++H DSL + +
Sbjct: 12 GIALTDRQLAQFEIYYELLTEKNKVMNLTAITEREDVILKHFVDSLALVKAECGFSSQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
+D+G+G GFPGI I ++ + L++S NK+ FL+ V+ R ++
Sbjct: 72 LDVGTGAGFPGIPLKIAFPGLK---IVLLDSLNKRVKFLQEVIDALELHDITAVHGRAED 128
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D++ +RA+A+L TL EY P++
Sbjct: 129 YARQKEYREQFDLVVSRAVANLSTLSEYCLPYVK 162
>gi|209883523|ref|YP_002287380.1| methyltransferase GidB [Oligotropha carboxidovorans OM5]
gi|209871719|gb|ACI91515.1| methyltransferase GidB [Oligotropha carboxidovorans OM5]
Length = 229
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRETL +LE + L L+W NLV+ ST+ W RHV DSL++ L + DLGS
Sbjct: 23 VSRETLGRLEAYVDLLLQWQAVTNLVAPSTLPTLWTRHVADSLQLLDLASRAKTFADLGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI- 139
GGGFPGI+ + L+ G V+L+E KKA+FLR ++ T G+V I +
Sbjct: 83 GGGFPGIVLACALADRPGAHVDLVERNAKKAAFLREALRITGGAGEVHHRDIGDYVNSRA 142
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L LL ++ P +
Sbjct: 143 APVDCVTARALAPLHQLLGFAEPLVRN 169
>gi|148559599|ref|YP_001259865.1| 16S rRNA methyltransferase GidB [Brucella ovis ATCC 25840]
gi|166224577|sp|A5VT18|RSMG_BRUO2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148370856|gb|ABQ60835.1| methyltransferase GidB [Brucella ovis ATCC 25840]
Length = 213
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 91/146 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS+++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSVQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|307703679|ref|ZP_07640620.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|307622514|gb|EFO01510.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 237
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 4 ETFYSLLAEHNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPIL 63
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 64 QGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLE 120
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ DV++ARA+A + L E + P+L
Sbjct: 121 GVHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLK 165
>gi|256060024|ref|ZP_05450206.1| 16S rRNA methyltransferase GidB [Brucella neotomae 5K33]
gi|261324001|ref|ZP_05963198.1| ribosomal RNA small subunit methyltransferase G [Brucella neotomae
5K33]
gi|261299981|gb|EEY03478.1| ribosomal RNA small subunit methyltransferase G [Brucella neotomae
5K33]
Length = 213
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|254690192|ref|ZP_05153446.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 6 str. 870]
gi|256258446|ref|ZP_05463982.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 9 str. C68]
gi|260755733|ref|ZP_05868081.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 6 str. 870]
gi|260884759|ref|ZP_05896373.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 9 str. C68]
gi|297247288|ref|ZP_06931006.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 5 str. B3196]
gi|260675841|gb|EEX62662.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 6 str. 870]
gi|260874287|gb|EEX81356.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 9 str. C68]
gi|297174457|gb|EFH33804.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 5 str. B3196]
Length = 213
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|225626439|ref|ZP_03784478.1| methyltransferase GidB [Brucella ceti str. Cudo]
gi|260169467|ref|ZP_05756278.1| 16S rRNA methyltransferase GidB [Brucella sp. F5/99]
gi|261758994|ref|ZP_06002703.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
F5/99]
gi|225618096|gb|EEH15139.1| methyltransferase GidB [Brucella ceti str. Cudo]
gi|261738978|gb|EEY26974.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
F5/99]
Length = 213
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|225570318|ref|ZP_03779343.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
gi|225160850|gb|EEG73469.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
Length = 237
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ IL+ +++ E+ E FY L ++W+K +NL + E+ +H DSL +
Sbjct: 1 MSKILKTKLQELNISINDRQEEQFEQFYDLLIEWNKVMNLTGITEYEEVVEKHFVDSLSL 60
Query: 66 F--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
ID+G+G GFPGI I + + L++S NK+ FL V+++T
Sbjct: 61 VKAIEIDKIHSVIDIGTGAGFPGIPLKIAFPHLN---ITLLDSLNKRIRFLDTVIERTGL 117
Query: 124 R-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++ + D+ +RA+A+L TL EY P++
Sbjct: 118 KDIRTIHGRAEDYAKQKEYREMYDLCVSRAVANLATLSEYCIPYIR 163
>gi|17986292|ref|NP_538926.1| 16S rRNA methyltransferase GidB [Brucella melitensis bv. 1 str.
16M]
gi|62290904|ref|YP_222697.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 1 str. 9-941]
gi|82700815|ref|YP_415389.1| 16S rRNA methyltransferase GidB [Brucella melitensis biovar Abortus
2308]
gi|161619974|ref|YP_001593861.1| glucose-inhibited division protein B [Brucella canis ATCC 23365]
gi|163844078|ref|YP_001628482.1| glucose-inhibited division protein B [Brucella suis ATCC 23445]
gi|189025117|ref|YP_001935885.1| 16S rRNA methyltransferase GidB [Brucella abortus S19]
gi|225853491|ref|YP_002733724.1| 16S rRNA methyltransferase GidB [Brucella melitensis ATCC 23457]
gi|254696309|ref|ZP_05158137.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 2 str.
86/8/59]
gi|254705061|ref|ZP_05166889.1| 16S rRNA methyltransferase GidB [Brucella suis bv. 3 str. 686]
gi|254707421|ref|ZP_05169249.1| 16S rRNA methyltransferase GidB [Brucella pinnipedialis M163/99/10]
gi|254709037|ref|ZP_05170848.1| 16S rRNA methyltransferase GidB [Brucella pinnipedialis B2/94]
gi|254731225|ref|ZP_05189803.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 4 str. 292]
gi|256030562|ref|ZP_05444176.1| 16S rRNA methyltransferase GidB [Brucella pinnipedialis M292/94/1]
gi|256112384|ref|ZP_05453305.1| 16S rRNA methyltransferase GidB [Brucella melitensis bv. 3 str.
Ether]
gi|256158558|ref|ZP_05456448.1| 16S rRNA methyltransferase GidB [Brucella ceti M490/95/1]
gi|256253967|ref|ZP_05459503.1| 16S rRNA methyltransferase GidB [Brucella ceti B1/94]
gi|256263029|ref|ZP_05465561.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 2 str. 63/9]
gi|256370458|ref|YP_003107969.1| glucose-inhibited division protein B [Brucella microti CCM 4915]
gi|260546165|ref|ZP_05821905.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
NCTC 8038]
gi|260562964|ref|ZP_05833450.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. 16M]
gi|260567470|ref|ZP_05837940.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
4 str. 40]
gi|260758957|ref|ZP_05871305.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 4 str. 292]
gi|260760680|ref|ZP_05873023.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 2 str. 86/8/59]
gi|261221109|ref|ZP_05935390.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
B1/94]
gi|261314906|ref|ZP_05954103.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M163/99/10]
gi|261316536|ref|ZP_05955733.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis B2/94]
gi|261755764|ref|ZP_05999473.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
3 str. 686]
gi|265987610|ref|ZP_06100167.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M292/94/1]
gi|265993819|ref|ZP_06106376.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 3 str. Ether]
gi|265997070|ref|ZP_06109627.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M490/95/1]
gi|294851289|ref|ZP_06791962.1| 16S rRNA methyltransferase GidB [Brucella sp. NVSL 07-0026]
gi|20177888|sp|Q8YJS4|RSMG_BRUME RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|75496087|sp|Q57AJ8|RSMG_BRUAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123547325|sp|Q2YR13|RSMG_BRUA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039486|sp|A9M9E3|RSMG_BRUC2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039487|sp|B0CJG0|RSMG_BRUSI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238689412|sp|B2S959|RSMG_BRUA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766885|sp|C0RFU8|RSMG_BRUMB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|17981874|gb|AAL51190.1| glucose inhibited division protein b [Brucella melitensis bv. 1
str. 16M]
gi|62197036|gb|AAX75336.1| GidB, glucose-inhibited division protein B [Brucella abortus bv. 1
str. 9-941]
gi|82616916|emb|CAJ12017.1| Glucose inhibited division protein [Brucella melitensis biovar
Abortus 2308]
gi|161336785|gb|ABX63090.1| methyltransferase GidB [Brucella canis ATCC 23365]
gi|163674801|gb|ABY38912.1| methyltransferase GidB [Brucella suis ATCC 23445]
gi|189020689|gb|ACD73411.1| Glucose inhibited division protein [Brucella abortus S19]
gi|225641856|gb|ACO01770.1| methyltransferase GidB [Brucella melitensis ATCC 23457]
gi|256000621|gb|ACU49020.1| glucose-inhibited division protein B [Brucella microti CCM 4915]
gi|260096272|gb|EEW80148.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
NCTC 8038]
gi|260152980|gb|EEW88072.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. 16M]
gi|260156988|gb|EEW92068.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
4 str. 40]
gi|260669275|gb|EEX56215.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 4 str. 292]
gi|260671112|gb|EEX57933.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 2 str. 86/8/59]
gi|260919693|gb|EEX86346.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
B1/94]
gi|261295759|gb|EEX99255.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis B2/94]
gi|261303932|gb|EEY07429.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M163/99/10]
gi|261745517|gb|EEY33443.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
3 str. 686]
gi|262551538|gb|EEZ07528.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M490/95/1]
gi|262764800|gb|EEZ10721.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 3 str. Ether]
gi|263092902|gb|EEZ17077.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 2 str. 63/9]
gi|264659807|gb|EEZ30068.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M292/94/1]
gi|294819878|gb|EFG36877.1| 16S rRNA methyltransferase GidB [Brucella sp. NVSL 07-0026]
gi|326410055|gb|ADZ67120.1| Glucose inhibited division protein [Brucella melitensis M28]
gi|326539772|gb|ADZ87987.1| methyltransferase GidB [Brucella melitensis M5-90]
Length = 213
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|251800243|ref|YP_003014974.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
gi|247547869|gb|ACT04888.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
Length = 240
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
N +S + LE+ + ++ L ++W++K+NL + + + +H DS+ +
Sbjct: 15 NGILLSPKQLEQFDSYHRLLVEWNEKMNLTGITERDAVFEKHFYDSISLSFFVNMKEVGS 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+GSG GFP I I ++ V +++S NK+ FL ++VQ+ R +
Sbjct: 75 IADIGSGAGFPSIPLKICYPHLK---VVIVDSLNKRIQFLNHLVQELGLENVNCVHGRAE 131
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ P + D+++ARA+A L+ L E+ P+ +
Sbjct: 132 DIARMPAYRDSFDLVTARAVARLNVLNEFCLPFTRK 167
>gi|158321888|ref|YP_001514395.1| methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
gi|166989742|sp|A8MKR7|RSMG_ALKOO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158142087|gb|ABW20399.1| methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
Length = 239
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL+ ++ + +L + + L+W++K+NL + +D I+H DSL Q
Sbjct: 5 DILKEGAQGLNIEITDAQINQLIKYKDILLEWNQKMNLTAIEEEKDVMIKHFLDSLSCIQ 64
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
ID+G+G GFPG+ I L IE + L++S K+ SFL V +T +
Sbjct: 65 SKYLKREGKMIDVGTGAGFPGVPLKIALPGIE---LTLLDSLRKRISFLEEVCAETKLGQ 121
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ D +RA+A L+ L+EY P++
Sbjct: 122 VDFVHGRAEDIGQSKDYREKYDYAVSRAVAALNVLVEYCLPFVK 165
>gi|168491204|ref|ZP_02715347.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
gi|183574346|gb|EDT94874.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
Length = 237
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ ++ R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHLYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|222525733|ref|YP_002570204.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
gi|222449612|gb|ACM53878.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
Length = 442
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQ 67
+LR +++ L + E + + W+++ NL + RH+ DS
Sbjct: 212 LLRKTTADWGLSLNDHQLAQFERYLDELMTWNERFNLTAVRDRAAMVRRHLLDSLWLARV 271
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
P ID+GSG GFP + I ++ V L+E+ KKA+FLR+V+ +
Sbjct: 272 WETPPDSLIDIGSGAGFPALPLKILYPALP---VTLVEATGKKATFLRHVIDCLQLHNIR 328
Query: 127 VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
V RI+ Q V++ARA+A+L LLEY+ P L
Sbjct: 329 VLNERIETVGQNPTEREHYQVVTARAVAELRVLLEYALPLLR 370
>gi|163847861|ref|YP_001635905.1| 16S rRNA methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
gi|189039492|sp|A9WGI4|RSMG_CHLAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163669150|gb|ABY35516.1| methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
Length = 238
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQ 67
+LR +++ L + E + + W+++ NL + RH+ DS
Sbjct: 8 LLRKTTADWGLSLNDHQLAQFERYLDELMTWNERFNLTAVRDRAAMVRRHLLDSLWLARV 67
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
P ID+GSG GFP + I ++ V L+E+ KKA+FLR+V+ +
Sbjct: 68 WETPPDSLIDIGSGAGFPALPLKILYPALP---VTLVEATGKKATFLRHVIDCLQLHNIR 124
Query: 127 VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
V RI+ Q V++ARA+A+L LLEY+ P L
Sbjct: 125 VLNERIETVGQNPTEREHYQVVTARAVAELRVLLEYALPLLR 166
>gi|310659879|ref|YP_003937600.1| glucose-inhibited cell-division methyltransferase [Clostridium
sticklandii DSM 519]
gi|308826657|emb|CBH22695.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Clostridium
sticklandii]
Length = 240
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV- 65
+ IL +++ + + L+++K +NL + E+ + +H DSL
Sbjct: 4 DKILSQGLSSWNIDITENQQNNFKIYMDTLLEYNKVMNLTAIEDPEEIYTKHFLDSLSCL 63
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+L ID+G+G GFP I I I+ +++S NK+ +FL+ V +
Sbjct: 64 LVDELKTVGLKAIDVGTGAGFPSIPIKIMRPDIKM---TMLDSLNKRINFLKEVGARVGL 120
Query: 124 -RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++A P+ D++ +RA+A L LLEY P+L +
Sbjct: 121 DNAEYLHSRAEDAGSNPKYREQYDIVLSRAVASLPVLLEYCSPFLKK 167
>gi|167748065|ref|ZP_02420192.1| hypothetical protein ANACAC_02809 [Anaerostipes caccae DSM 14662]
gi|167652057|gb|EDR96186.1| hypothetical protein ANACAC_02809 [Anaerostipes caccae DSM 14662]
Length = 236
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIW 75
++ L + E +Y L + +K +NL + + ED ++H DSL + +
Sbjct: 12 GIALTDRQLAQFEIYYELLTEKNKVMNLTAITEREDVILKHFVDSLALVKAECGFSSQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
+D+G+G GFPGI I ++ + L++S NK+ FL+ V+ R ++
Sbjct: 72 LDVGTGAGFPGIPLKIAFPGLK---IVLLDSLNKRVKFLQEVIDALELHDITAVHGRAED 128
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D++ +RA+A+L TL EY P++
Sbjct: 129 YARQKEYREQFDLVVSRAVANLSTLSEYCLPYVK 162
>gi|329768827|ref|ZP_08260256.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
gi|328838220|gb|EGF87833.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
Length = 238
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 9 ILRANYLLN------TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
++ N +S + + + +Y L ++W++KINL + + E+F+ +H DS
Sbjct: 1 MMNKQEFYNKVTEQTGIELSEKQKNQYQRYYELVVEWNQKINLTAITEEEEFYSKHFYDS 60
Query: 63 LR--VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ F+ + D+GSG GFP I I ++E +V+ + + K + L+ ++
Sbjct: 61 ISLAFFKDYSNVDNICDVGSGAGFPSIPLKILYPNLEVTIVDSLNKRIKFLNLLKDELEL 120
Query: 121 TAAR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
T A I + ++++ARA+A L+ L E P + +
Sbjct: 121 TNCNFIHARAEEIGQNRDYREKFEIVTARAVARLNVLSELCLPLVRK 167
>gi|167462790|ref|ZP_02327879.1| glucose-inhibited division protein B [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381366|ref|ZP_08055369.1| 16S rRNA methyltransferase GidB-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154942|gb|EFX47213.1| 16S rRNA methyltransferase GidB-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 242
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
+VS + L++ EY+Y ++W++K+NL + + E +++H D SL F+
Sbjct: 16 GISVSDQQLQQFEYYYQELVEWNEKMNLTAITGREQVYVKHFYDSLSLSFFKDMNKVERM 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
D+GSG GFPGI I ++ + +++S NK+ FLR ++ K + + R ++
Sbjct: 76 ADIGSGAGFPGIPLKIMFPHLQ---LTIVDSLNKRILFLRQLIDKLGLKEVECVHSRAED 132
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A D+++ARA+A L L E P+
Sbjct: 133 AGRLESHRDRYDLVTARAVARLAVLNELCLPFTKP 167
>gi|153815415|ref|ZP_01968083.1| hypothetical protein RUMTOR_01650 [Ruminococcus torques ATCC 27756]
gi|317500877|ref|ZP_07959089.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
gi|145847274|gb|EDK24192.1| hypothetical protein RUMTOR_01650 [Ruminococcus torques ATCC 27756]
gi|316897757|gb|EFV19816.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
Length = 239
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
N++ E+ + +Y + ++W+ +NL + ++ ++H DSL + + I
Sbjct: 16 NINLTEHQKEQFDRYYEMLVEWNNVMNLTGITDYDEVNLKHFTDSLTLVRNIDMNKIDAV 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFPG+ I I V L++S NK+ FL V+++ + R ++
Sbjct: 76 IDIGTGAGFPGLPIKIAFPHI---HVVLLDSLNKRIKFLNAVIEELDLADVETLHGRAED 132
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ +RA+A+L TL EY P++ +
Sbjct: 133 YAKRKEYREQFDLCVSRAVANLSTLSEYCIPFVKR 167
>gi|313885633|ref|ZP_07819383.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619363|gb|EFR30802.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
Length = 239
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW- 75
N+ +++ E +Y ++W++KINL + + ++ +++H DSL L
Sbjct: 13 KGINLDSRQIQQFESYYQFLVEWNQKINLTAITEQKEVYLKHFYDSLAPLWLTDKIQADK 72
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRI 132
ID+G+G GFP I +I + V +++S NK+ FL +V+ + R
Sbjct: 73 ALIDIGAGAGFPSIPLAIAQPGLR---VTIVDSLNKRIKFLEVLVEALGLDQVQALHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ + D+++ARA+A L+ L EY P+ +
Sbjct: 130 EDLGQDKRYRQNFDLVTARAVAQLNVLAEYCLPFAKK 166
>gi|256844007|ref|ZP_05549494.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|293380690|ref|ZP_06626739.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
gi|256613912|gb|EEU19114.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|290922730|gb|EFD99683.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
Length = 240
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + +E+ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPEKFILELSKHNFKLTDQQIEQFKIYFNYLIEVNEHVNLTRITEEDEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I ++ + +++S K+ +FL+ ++ K
Sbjct: 61 PLFTFGDVFKDGATLCDVGAGAGFPSIPLKILQPELK---ITIVDSLAKRLTFLKNLITK 117
Query: 121 TAAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 118 LDLKDVELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKK 167
>gi|315612910|ref|ZP_07887821.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
gi|315315020|gb|EFU63061.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
Length = 245
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 12 ETFYSLLAEQNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPIL 71
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 72 QGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLD 128
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ DV++ARA+A + L E + P+L
Sbjct: 129 GVHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLK 173
>gi|306825496|ref|ZP_07458836.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432434|gb|EFM35410.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 245
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 12 ETFYSLLAEQNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPIL 71
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 72 QGLIQNENIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELNLD 128
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+++ARA+A + L E + P+L
Sbjct: 129 GVHFYHGRAEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLK 173
>gi|163742612|ref|ZP_02149998.1| glucose-inhibited division protein B [Phaeobacter gallaeciensis
2.10]
gi|161384197|gb|EDQ08580.1| glucose-inhibited division protein B [Phaeobacter gallaeciensis
2.10]
Length = 204
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 63/148 (42%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET ++L+++ L KWS KINL++ ST++D W RH+ DS+++ Q +P W+D+G
Sbjct: 10 HVSRETYDRLKHYESLVKKWSPKINLIAKSTLDDVWDRHIVDSVQICQGIDFPQTWLDIG 69
Query: 80 SGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFPG++ +I + ++ LIES +K +FLR +++ + KV + RI++ P M
Sbjct: 70 SGGGFPGVVIAILAAERAPDCVITLIESDQRKCAFLRTAIRECGVKAKVVSERIEKVPPM 129
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
D+ISARALADL TLL ++ L
Sbjct: 130 --AADIISARALADLTTLLGFAERHLQP 155
>gi|83309102|ref|YP_419366.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division [Magnetospirillum magneticum AMB-1]
gi|123543729|sp|Q2WBG8|RSMG_MAGMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82943943|dbj|BAE48807.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Magnetospirillum magneticum
AMB-1]
Length = 205
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-L 68
+ LL VSRETLE+L + L +KW +INLV TV D W RH+ DS+++F +
Sbjct: 1 MGPEELLTKSGVSRETLERLRLYADLLVKWQARINLVGPDTVPDLWSRHMLDSVQLFPLI 60
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+DLGSG GFPG++ ++ V+L+ES ++K +FLR V + T V
Sbjct: 61 KVGARRLVDLGSGAGFPGLVLAVM----GAPDVHLVESDSRKCAFLREVARVTETPVTVI 116
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI++ + DV++ARALA LD LL ++FP L +
Sbjct: 117 NKRIEQVAPL--GADVVTARALAPLDRLLGWAFPHLAE 152
>gi|283787571|ref|YP_003367436.1| glucose inhibited division protein [Citrobacter rodentium ICC168]
gi|282951025|emb|CBG90703.1| glucose inhibited division protein [Citrobacter rodentium ICC168]
Length = 207
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S ++ +RH+ DS+ V H + +ID
Sbjct: 13 GISLTDHQKNQLIAYVDMLHKWNKAYNLTSVRDPDEMLVRHILDSI-VVAPHLHGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI SI L++S K+ FLR V + A + EA
Sbjct: 72 VGTGPGLPGIPLSIVRPE---SHFTLLDSLGKRVRFLRQVQHELALKNITPVQSRVEAFP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 AEPPFDGVISRAFASLNDMVNWCHHL 154
>gi|319938660|ref|ZP_08013024.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
gi|319811710|gb|EFW07976.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
Length = 237
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++ ++ E+++ L ++W++KINL + + ++ +++H DS +
Sbjct: 10 LKQQQIELTDRQKQQFEHYFELLVEWNEKINLTAITDKKEVYLKHFYDSSAPILQGLIEN 69
Query: 74 IWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
I D+G+G GFP + I +++ V +I+S NK+ FL ++ + +
Sbjct: 70 KNIKLLDIGAGAGFPSLPMKILYPALD---VTIIDSLNKRILFLNHLADELGLENVHFYH 126
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFAQDKDFRAQFDIVTARAVARMQVLAELTIPFLK 165
>gi|324111639|gb|EGC05620.1| glucose inhibited division protein [Escherichia fergusonii B253]
gi|325499546|gb|EGC97405.1| 16S rRNA methyltransferase GidB [Escherichia fergusonii ECD227]
Length = 207
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSSLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLDN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A LD +L +
Sbjct: 117 ITPVQSRVEEFPAEPPFDGVISRAFASLDDMLNWCHHL 154
>gi|306843476|ref|ZP_07476077.1| methyltransferase GidB [Brucella sp. BO1]
gi|306276167|gb|EFM57867.1| methyltransferase GidB [Brucella sp. BO1]
Length = 213
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 91/146 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS+++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLVDLWNRHILDSVQLFPLAKDATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERPGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|300173934|ref|YP_003773100.1| methyltransferase GidB [Leuconostoc gasicomitatum LMG 18811]
gi|299888313|emb|CBL92281.1| Methyltransferase gidB [Leuconostoc gasicomitatum LMG 18811]
Length = 239
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+++ +++ E ++ + + ++ +NL + + D +++H DSL V
Sbjct: 14 GITLTKHQIQQFEDYFDMLIATNEHVNLTAITEKNDVYLKHFYDSLTVSFYEQDLQTAEK 73
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRI 132
ID+G+G GFP + I ++ + +++S K+ +FL+ VV ++ R
Sbjct: 74 TLIDIGTGAGFPSLPLKIVFPQLK---ITMVDSLQKRINFLQEVVTTLDLSGVEIIHGRA 130
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ Q D +ARA+A L EY+ P++ +
Sbjct: 131 EDIGQNLRYREAFDYATARAVARTSVLAEYTLPFVKK 167
>gi|58338077|ref|YP_194662.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus NCFM]
gi|227902745|ref|ZP_04020550.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
gi|81311393|sp|Q5FI43|RSMG_LACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|58255394|gb|AAV43631.1| glucose inhibited division protein B [Lactobacillus acidophilus
NCFM]
gi|227869408|gb|EEJ76829.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
Length = 240
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + +S + ++ + ++ ++ ++ +NL + + +++H DS+
Sbjct: 1 MNPEEFILELSKHNFELSDKQKQQFKLYFKYLIEVNEHVNLTRITEENEVYLKHFFDSVT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I +++ V +++S K+ +FL+ +++K
Sbjct: 61 PLFTFGEVFKDGATLCDVGAGAGFPSIPLKILNPTLK---VTIVDSLAKRLTFLKNLIEK 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 118 LGLTDVELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKK 167
>gi|15674490|ref|NP_268664.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes M1 GAS]
gi|71910092|ref|YP_281642.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS5005]
gi|20177901|sp|Q9A1D7|RSMG_STRP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13621590|gb|AAK33385.1| putative glucose-inhibited division protein [Streptococcus pyogenes
M1 GAS]
gi|71852874|gb|AAZ50897.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS5005]
Length = 237
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +++S + E+ + ++ ++W+ KINL + + + +++H DS+ + I
Sbjct: 13 DGFSLSSKQKEQFDTYFKSLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|291521112|emb|CBK79405.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus catus GD/7]
Length = 239
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-- 67
+ + +S E + +Y + ++ +K +NL + ++F +H DSL +
Sbjct: 7 FKKKVDMLHIKLSDEQYNQYVTYYEMVVEKNKVMNLTGITEFDEFIDKHYIDSLSIVNAV 66
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
ID+G+G GFPGI I ++ + L++S NK+ +FL VV+ +
Sbjct: 67 DIHQVQSAIDVGTGAGFPGIPLKIAFPHLK---ITLLDSLNKRINFLNEVVETLGLENVE 123
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ ++RA+A+L TL EY P++
Sbjct: 124 TCHGRAEDFGHRKEYREQYDLCTSRAVANLSTLSEYCVPFVK 165
>gi|306834178|ref|ZP_07467298.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
gi|304423751|gb|EFM26897.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
Length = 244
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF- 66
+ ++ ++ E ++ L ++W++KINL + + E +++H DS+
Sbjct: 11 EEFYKKLSQQGFELTDTQKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIAPVL 70
Query: 67 --QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
++ +D+G+G GFP I I I+ V +I+S NK+ +FL + +
Sbjct: 71 QGKITNQAICLLDIGAGAGFPSIPIKILCPDID---VTIIDSLNKRINFLNLLADELGLE 127
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+++ARA+A L L E + P+L
Sbjct: 128 GVHFYHGRAEDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLK 172
>gi|332800540|ref|YP_004462039.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
sp. Re1]
gi|332698275|gb|AEE92732.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
sp. Re1]
Length = 238
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 9/169 (5%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D IL + +S E + +L+ F L L+ +K +NL S + EDF +HV DS
Sbjct: 1 MNDFKEILTREAKGHDIELSDEQILQLDVFRSLLLERNKMVNLTSITEPEDFAKKHVIDS 60
Query: 63 LRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + + +D+G+G G PG+I I IE ++L+ES KK FLR V+ K
Sbjct: 61 LMIVKHIEIDHEAKIMDVGTGPGIPGLILKIYRPDIE---LSLLESVRKKTDFLRDVIGK 117
Query: 121 TAA-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+V R +E + + D++ ARA++ L+ LLE P++
Sbjct: 118 MNISDVQVINGRAEEVGHDIKHRESYDIVVARAVSSLNVLLELCLPFVR 166
>gi|254694682|ref|ZP_05156510.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 3 str. Tulya]
gi|261215010|ref|ZP_05929291.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 3 str. Tulya]
gi|260916617|gb|EEX83478.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 3 str. Tulya]
Length = 213
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKATFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|163803607|ref|ZP_02197473.1| glucose-inhibited division protein B [Vibrio sp. AND4]
gi|159172601|gb|EDP57459.1| glucose-inhibited division protein B [Vibrio sp. AND4]
Length = 211
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A VS + E+L + L KW+K NL S ++ ++H+ DS+ V H
Sbjct: 8 LDALIAQTDLQVSEKQREQLVGYVELLDKWNKAYNLTSVRDPQEMLVKHILDSI-VVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 67 LPGERFIDVGTGPGLPGIPLAIMNPEK---SFYLLDSLGKRIRFIKQVVHTLGLKNVTAI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A + ++E+
Sbjct: 124 QSRVEEFQPEEKFDGVLSRAFASMTDMVEWCHHLPKP 160
>gi|258543706|ref|YP_003189139.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-01]
gi|256634784|dbj|BAI00760.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-01]
gi|256637840|dbj|BAI03809.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-03]
gi|256640894|dbj|BAI06856.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-07]
gi|256643949|dbj|BAI09904.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-22]
gi|256647004|dbj|BAI12952.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-26]
gi|256650057|dbj|BAI15998.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-32]
gi|256653047|dbj|BAI18981.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256656101|dbj|BAI22028.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-12]
Length = 198
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+VSRET EKL F L KW+ +INLVSS +E+ W RHV DSL++ L S +I
Sbjct: 6 EGVHVSRETEEKLSAFVSLLEKWNPRINLVSSKDIENVWSRHVLDSLQLVPLIQGQSRFI 65
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+GSGGGFP ++ I G LIES +KA+FLR + T +V CR++
Sbjct: 66 DMGSGGGFPAVVVGIA----TGIPGVLIESDQRKAAFLREAARLTQTHLEVLPCRLESVK 121
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ V++ARALA L LLE++ P L +
Sbjct: 122 --VQPAPVVTARALAPLVKLLEWAHPLLQPE 150
>gi|315644288|ref|ZP_07897458.1| methyltransferase GidB [Paenibacillus vortex V453]
gi|315280663|gb|EFU43952.1| methyltransferase GidB [Paenibacillus vortex V453]
Length = 240
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSI 74
+ + + L++ E +Y + ++W++K+NL + E + +H D +L +
Sbjct: 15 HGITIDEKQLQQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSVTLAFYVDMSKIGS 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+GSG GFPGI I I+ + +++S NK+ +FL++VV ++ R +
Sbjct: 75 MADIGSGAGFPGIPLKICFPHIK---LTIVDSLNKRITFLKFVVDTLGLSSVELIHGRAE 131
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
E + D+++ARA+A + L E+ P+
Sbjct: 132 EVARKQGYRDGFDLVTARAVARMAVLNEFCLPFTK 166
>gi|163943162|ref|YP_001648046.1| glucose-inhibited division protein B [Bacillus weihenstephanensis
KBAB4]
gi|229564286|sp|A9VTL8|RSMG_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163865359|gb|ABY46418.1| methyltransferase GidB [Bacillus weihenstephanensis KBAB4]
Length = 239
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L ++S LE+ ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGISLSSRQLEQFGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSVT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VKIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + D++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|329298810|ref|ZP_08256146.1| 16S rRNA methyltransferase GidB [Plautia stali symbiont]
Length = 205
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S + ++L + L KW+K NL S + +RH+ DS+ V + H +ID
Sbjct: 13 NISLSDQQKQQLVGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVESHLQGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+G G PGI +I L++S K+ FLR V + ++E P
Sbjct: 72 VGTGPGLPGIPLAIVRP---QAHFTLLDSLGKRVRFLRQVQHELGLTNVTPVQSPVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ +L +
Sbjct: 129 A-EPPFDGVISRAFASLEDMLNWCHHL 154
>gi|23502908|ref|NP_699035.1| 16S rRNA methyltransferase GidB [Brucella suis 1330]
gi|29336737|sp|Q8FY29|RSMG_BRUSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|23348939|gb|AAN30950.1| glucose-inhibited division protein B [Brucella suis 1330]
Length = 213
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLYVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|300024785|ref|YP_003757396.1| methyltransferase GidB [Hyphomicrobium denitrificans ATCC 51888]
gi|299526606|gb|ADJ25075.1| methyltransferase GidB [Hyphomicrobium denitrificans ATCC 51888]
Length = 219
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 12/168 (7%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ +SRETL++L + + +W INLV+ ST+ D W RH DS ++++ P
Sbjct: 11 ESFQAEFGISRETLDRLTTYAQILTRWQATINLVAPSTLGDIWNRHFADSAQLWRFRPPN 70
Query: 73 -SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
W+D+GSG GFPG++ +I + LIES +KA+FLR V + T + R
Sbjct: 71 ARNWLDIGSGAGFPGLVLAIIGAETGATHHILIESDARKAAFLREVARATGITVDILCMR 130
Query: 132 IQ--EAPQMITTCDVISARALADLDTLLEYSFP---------WLYQKK 168
I+ E + + D ++ARALA L LLE S P +L K
Sbjct: 131 IENSETRAKVKSVDCLTARALAPLPRLLEMSAPYFTSATLGLFLKGKD 178
>gi|227879182|ref|ZP_03997054.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256849430|ref|ZP_05554862.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|262046097|ref|ZP_06019060.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|312976919|ref|ZP_07788668.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
gi|227861185|gb|EEJ68832.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256713546|gb|EEU28535.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|260573427|gb|EEX29984.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|310896247|gb|EFQ45312.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
Length = 240
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + +E+ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPEKFILELSKHNFKLTDQQIEQFKIYFNYLIEVNEHVNLTRITEEDEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I ++ + +++S K+ +FL+ ++ K
Sbjct: 61 PLFTFGDVFKDGATLCDVGAGAGFPSIPLKILQPELK---ITIVDSLAKRLTFLKNLITK 117
Query: 121 TAAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 118 LDLKDVELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKK 167
>gi|42519771|ref|NP_965701.1| glucose-inhibited division protein B [Lactobacillus johnsonii NCC
533]
gi|268320135|ref|YP_003293791.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
gi|55976462|sp|Q74HM3|RSMG_LACJO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|41584061|gb|AAS09667.1| glucose inhibited division protein B [Lactobacillus johnsonii NCC
533]
gi|262398510|emb|CAX67524.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
Length = 239
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N I + ++ + ++ +Y ++++KK+NL + + +++H DS+
Sbjct: 1 MNPEIFAKELAKYGFELNEKQKKQFATYYDKLVEFNKKVNLTRITDKNEVYLKHFFDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP + I ++ + +++S K+ FL +V
Sbjct: 61 PLLEFPDLFKGEKTLCDVGAGAGFPSLPIKILCPNL---SITIVDSLGKRLKFLDELVND 117
Query: 121 TAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++A + D+++ RA+A + L EY P
Sbjct: 118 LGLDKVTLVHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPLAK 166
>gi|299133193|ref|ZP_07026388.1| methyltransferase GidB [Afipia sp. 1NLS2]
gi|298593330|gb|EFI53530.1| methyltransferase GidB [Afipia sp. 1NLS2]
Length = 220
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L VSRET +LE + L L+W NLV+ ST+ W RH+ DSL++
Sbjct: 1 MSDPADKAAALALMPVSRETQARLEAYVDLLLQWQAVTNLVAPSTLPTLWTRHIADSLQL 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P + DLGSGGGFPGI+ + L+ G ++L+E KKA+FLR ++ T G
Sbjct: 61 LDLAPNAKTFADLGSGGGFPGIVLACVLADRPGARIDLVERNAKKAAFLREALRITGGAG 120
Query: 126 KVFACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWLYQ 166
+V I + T D ++ARALA L LL ++ P +
Sbjct: 121 EVHHRDIVDYVDSRTAPVDCVTARALAPLHQLLGFAEPLVRN 162
>gi|188580909|ref|YP_001924354.1| methyltransferase GidB [Methylobacterium populi BJ001]
gi|238692888|sp|B1ZGG1|RSMG_METPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|179344407|gb|ACB79819.1| methyltransferase GidB [Methylobacterium populi BJ001]
Length = 211
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 56/150 (37%), Positives = 81/150 (54%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L +NVSRET + L+ + +W NLV +T+ + W RHV D+L++ + P
Sbjct: 9 VLTEHNVSRETAQALDLYVAQLTRWQTVKNLVGPATLSEVWQRHVADALQLLTIAPEARR 68
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W+DLGSG G PG+I +I G V L+ES +K +FL + T A V RI+
Sbjct: 69 WLDLGSGAGIPGLILAIAGRGRSGFHVELVESNARKCAFLSETARLTGAPVTVHNARIEA 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ D++ ARALA L LL +S P L
Sbjct: 129 VIGHRSGIDIVCARALAPLTQLLAWSEPLL 158
>gi|59713181|ref|YP_205957.1| glucose-inhibited division protein B [Vibrio fischeri ES114]
gi|197334215|ref|YP_002157361.1| 16S rRNA methyltransferase GidB [Vibrio fischeri MJ11]
gi|75431404|sp|Q5E1M7|RSMG_VIBF1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|59481282|gb|AAW87069.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Vibrio fischeri
ES114]
gi|197315705|gb|ACH65152.1| 16S rRNA methyltransferase GidB [Vibrio fischeri MJ11]
Length = 210
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 4/166 (2%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D + NVS E+L + L KW+K NL S + I+H+ DS
Sbjct: 1 MTDLSQQFDRLIAQTDLNVSELQKEQLLGYVALLHKWNKAYNLTSVRNPSEMVIKHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ V +ID+G+G G PGI +I L++S K+ F++ V+ +
Sbjct: 61 I-VVSPKLSGERFIDVGTGPGLPGIPLAIMNPEK---SFTLLDSLGKRIRFIKQVIHELK 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
E Q D + +RA A + ++ + ++
Sbjct: 117 ITNVTPIQSRVEEFQPEEKFDAVLSRAFASMTDMVNWCHHLPKEED 162
>gi|293365141|ref|ZP_06611858.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|291316591|gb|EFE57027.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 245
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 12 ETFYSLLAEHNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPIL 71
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 72 QGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLE 128
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ DV++ARA+A + L E + P+L
Sbjct: 129 GVHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLK 173
>gi|148982410|ref|ZP_01816748.1| glucose-inhibited division protein B [Vibrionales bacterium SWAT-3]
gi|145960492|gb|EDK25862.1| glucose-inhibited division protein B [Vibrionales bacterium SWAT-3]
Length = 217
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
VS + +L + L KW+K NL S + ++H+ DS+ + H +ID
Sbjct: 23 DLEVSEKQRSQLVGYVELLNKWNKAYNLTSVRDPLEMMVKHILDSI-IVSTHLQGKRFID 81
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI SI E L++S K+ F++ VV + V E Q
Sbjct: 82 VGTGPGLPGIPLSIMNPDSEFY---LLDSLGKRIRFIKQVVHELGIDNVVPVQSRVEEFQ 138
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A + ++E+ ++
Sbjct: 139 PEEKFDAVLSRAFASMTDMVEWCHHLPKEQ 168
>gi|148251784|ref|YP_001236369.1| 16S rRNA methyltransferase GidB [Bradyrhizobium sp. BTAi1]
gi|189039484|sp|A5E8G9|RSMG_BRASB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146403957|gb|ABQ32463.1| Glucose inhibited division protein B [Bradyrhizobium sp. BTAi1]
Length = 222
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L+ + L L+W K NLV+ ST+ W RH+ DSL++ L P IW+DLGS
Sbjct: 26 VSRETEQRLDRYVALLLEWQAKTNLVAPSTLPHLWTRHISDSLQLLDLAPDAKIWVDLGS 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPG++ + L+ G V+L+E KKA+FLR ++ T A G V I + +
Sbjct: 86 GGGFPGVVLACALAERPGAEVHLVERIAKKAAFLREAIRVTGAPGIVHLSEIGDIVEKWS 145
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L L+ ++ P + +
Sbjct: 146 GGVDCVTARALAPLHQLIGFAEPLVKR 172
>gi|50913652|ref|YP_059624.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10394]
gi|73919635|sp|Q5XDS2|RSMG_STRP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50902726|gb|AAT86441.1| Methyltransferase [Streptococcus pyogenes MGAS10394]
Length = 237
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ + I
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ D ++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDAVTARAVARMQVLSELTIPFLK 165
>gi|317050170|ref|YP_004117818.1| methyltransferase GidB [Pantoea sp. At-9b]
gi|316951787|gb|ADU71262.1| methyltransferase GidB [Pantoea sp. At-9b]
Length = 205
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ + LL ++S + ++L + L KW+K NL S + +RH+ DS+ V
Sbjct: 1 MINKLSALLKAANISLSDQQKQQLVGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VEPHLQGERFIDVGTGPGLPGIPLAIVRP---QSHFTLLDSLGKRVRFLRQVQHELGLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A L+ ++ +
Sbjct: 117 VTPVQSRVEEFPAEPPFDGVISRAFASLEDMVNWCHHL 154
>gi|294085214|ref|YP_003551974.1| glucose inhibited division protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664789|gb|ADE39890.1| Glucose inhibited division protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 219
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ + + + NVSRET++K + L KW K +NLV+ +T++ W RH+ DS
Sbjct: 15 SEMTPEMTPETVQDMLNVSRETIDKFAIYLALLEKWQKSVNLVARATLDIAWQRHILDSG 74
Query: 64 RVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++ + P I D+GSG GFPG++ SI + V+++ES +KK FL+ V++K
Sbjct: 75 QLARYLPAGCKTILDVGSGAGFPGLVLSIM----QDATVHMVESDHKKTVFLQTVIRKLD 130
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V RI+ P M+ DVI+ARA A L + P +
Sbjct: 131 LSAVVHNERIESLPAMVP--DVITARAFAPLGKAITLLAPHMRP 172
>gi|238021265|ref|ZP_04601691.1| hypothetical protein GCWU000324_01163 [Kingella oralis ATCC 51147]
gi|237868245|gb|EEP69251.1| hypothetical protein GCWU000324_01163 [Kingella oralis ATCC 51147]
Length = 213
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 7/165 (4%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ DS L A N+S +KL + L KW+K NL + H+ D
Sbjct: 3 PFSDS---LAAGIAQMRLNISPAQQQKLLAYLALLQKWNKTYNLTALRDPAQMVSHHLLD 59
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + ID+GSGGG P I +I ++ + ++++ +KK +FLR +
Sbjct: 60 SLTLLPYLAQAESMIDVGSGGGMPAIPAAICRPDLQ---ITMVDANSKKTTFLRQAAIEL 116
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E D++++RA A+L + + L
Sbjct: 117 GLENVAVNSSRVE-ELGGQRADIVTSRAFAELADFVRLTRHLLND 160
>gi|329113881|ref|ZP_08242652.1| Ribosomal RNA small subunit methyltransferase G [Acetobacter
pomorum DM001]
gi|326696891|gb|EGE48561.1| Ribosomal RNA small subunit methyltransferase G [Acetobacter
pomorum DM001]
Length = 198
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 6/151 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+VSRET E+L F L KW+ +INLVSS +E+ W RHV DSL++ L S +I
Sbjct: 6 EGVHVSRETEERLSAFVSLLEKWNPRINLVSSKDIENVWSRHVLDSLQLVPLIQGQSRFI 65
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+GSGGGFP ++ I G LIES +KA+FLR + T +V CR++
Sbjct: 66 DMGSGGGFPAVVVGIA----TGIPGVLIESDQRKAAFLREAARLTQTDLEVLPCRLESVK 121
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ V++ARALA L LLE++ P L K
Sbjct: 122 --VQPAPVVTARALAPLVKLLEWAHPLLQPK 150
>gi|254000526|ref|YP_003052589.1| methyltransferase GidB [Methylovorus sp. SIP3-4]
gi|253987205|gb|ACT52062.1| methyltransferase GidB [Methylovorus sp. SIP3-4]
Length = 219
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
IL + ++VS+ T +KL + L KW+K NL + ++ H+ DSL
Sbjct: 5 EILASGIANAGWDVSQATQQKLLDYLALLQKWNKVHNLTAVRDPDEMVTLHLLDSLSVLP 64
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
PS +D+GSG G PGII ++ + ++ V I++ KKASF+R +
Sbjct: 65 HVQALSPSRLLDVGSGAGLPGIILALCMPDLK---VTTIDAVQKKASFMRQAKAELGIAN 121
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + D++ +RA +++ ++ + + +
Sbjct: 122 LEVIAGRVEQHRPSQAYDIVISRAFSEIALFIKLTRHLIAE 162
>gi|325978989|ref|YP_004288705.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178917|emb|CBZ48961.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 244
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ ++ ++ E ++ L ++W++KINL + + E +++H DS+
Sbjct: 11 EEFYKKLSQQGFELTDTQKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIAPVL 70
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP I I I+ V +I+S NK+ +FL + +
Sbjct: 71 QGKITNQAIRLLDIGAGAGFPSIPIKILCPDID---VTIIDSLNKRINFLNLLADELGLE 127
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+++ARA+A L L E + P+L
Sbjct: 128 GVHFYHGRAEDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLK 172
>gi|307708827|ref|ZP_07645289.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
gi|307615193|gb|EFN94404.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
Length = 237
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + ++ E ++ L ++W++KINL + + ++ +++H DS+ P+ I
Sbjct: 14 NLPLSDQQKKQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|325275322|ref|ZP_08141275.1| 16S rRNA methyltransferase GidB [Pseudomonas sp. TJI-51]
gi|324099570|gb|EGB97463.1| 16S rRNA methyltransferase GidB [Pseudomonas sp. TJI-51]
Length = 216
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLG 79
+S E EKL + L +KW+K NL + ++ RH+ DSL V +H W+D+G
Sbjct: 24 LSAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMAFIHSARDNWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGG PGI +I V ++++ KK FL V + EA Q
Sbjct: 84 SGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELKLDNLTVIHSRVEAFQPA 140
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
D I +RA + ++ ++
Sbjct: 141 QPFDGIISRAFSSMENFTNWTRHL 164
>gi|254230610|ref|ZP_04923969.1| methyltransferase GidB [Vibrio sp. Ex25]
gi|262392794|ref|YP_003284648.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. Ex25]
gi|151936870|gb|EDN55769.1| methyltransferase GidB [Vibrio sp. Ex25]
gi|262336388|gb|ACY50183.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. Ex25]
Length = 211
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + VS + E+L + L KW+K NL S D ++H+ DS+ V H
Sbjct: 8 LDSLIAKTDLEVSEQQREQLVGYVELLDKWNKAYNLTSVRDPLDMLVKHILDSI-VVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 67 LPGERFIDVGTGPGLPGIPLAIMNPEK---TFFLLDSLGKRIRFIKQVVHTLGLKNVTPI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E Q D + +RA A + ++E+ Q+
Sbjct: 124 QSRVEEFQPEEKFDGVLSRAFASMTDMVEWCHHLPKQE 161
>gi|291615446|ref|YP_003525603.1| methyltransferase GidB [Sideroxydans lithotrophicus ES-1]
gi|291585558|gb|ADE13216.1| methyltransferase GidB [Sideroxydans lithotrophicus ES-1]
Length = 207
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A V+ E KL + L KW+ NL + E H+ DSL V
Sbjct: 7 LAAGIAQMGLEVTPEQQVKLLDYLALLQKWNGVYNLTAIRQPEQMVSNHLLDSLAVLPY- 65
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+P W+D+G GGG PGI+ ++ L++S +KK F++ + +
Sbjct: 66 LWPRRWLDVGCGGGLPGIVLAVMRPEW---SFTLLDSNSKKIGFIQQAAIELDLQNVEVR 122
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
C E Q+ D I +RA A++ + S L
Sbjct: 123 CERVEQWQVQQKFDGIISRAFAEVADFVRLSRHLLKD 159
>gi|329925034|ref|ZP_08279978.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
gi|328940153|gb|EGG36485.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
Length = 240
Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
+ + + L + E +Y + ++W++K+NL + E + +H DS+ +
Sbjct: 15 HGIKIDEKQLHQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSITLAFYVDMNKIGN 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+GSG GFPGI I ++ + +++S NK+ +FL++V ++ R +
Sbjct: 75 LADIGSGAGFPGIPLKICFPHLK---LTIVDSLNKRITFLKHVADTLGLSEVELIHGRAE 131
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
E + D+++ARA+A + L E+ P+
Sbjct: 132 EVARKHGYRDGFDLVTARAVARMAVLNEFCLPFTK 166
>gi|298502717|ref|YP_003724657.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
gi|298238312|gb|ADI69443.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
Length = 245
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 22 NLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 81
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 82 LLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAE 138
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 139 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 173
>gi|295090266|emb|CBK76373.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium cf.
saccharolyticum K10]
Length = 242
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIWI 76
++ + +E+ +Y L +W++ +NL + + + + +H DSL + +
Sbjct: 20 LTEKQMEQFFRYYELLNEWNQVMNLTAITEMSEVVTKHFVDSLALKRAVDGLETEAFSVA 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPGI I + V L++S NK+ FL V+ + G R ++
Sbjct: 80 DVGTGAGFPGIPLKIAFPGLR---VTLLDSLNKRVKFLNTVISELGLEGITAVHGRAEDF 136
Query: 136 PQM---ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T D+ +RA+A+L TL EY P +
Sbjct: 137 GRNRVSRETFDICVSRAVANLSTLSEYCMPLVKP 170
>gi|283797200|ref|ZP_06346353.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
gi|291075161|gb|EFE12525.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
Length = 242
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIWI 76
++ + +E+ +Y L +W++ +NL + + + + +H DSL + +
Sbjct: 20 LTEKQMEQFFRYYELLNEWNQVMNLTAITEMSEVVTKHFVDSLALKRAVDGLETEAFSVA 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPGI I + V L++S NK+ FL V+ + G R ++
Sbjct: 80 DVGTGAGFPGIPLKIAFPGLR---VTLLDSLNKRVKFLNTVISELGLEGITAVHGRAEDF 136
Query: 136 PQM---ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T D+ +RA+A+L TL EY P +
Sbjct: 137 GRNRVSRETFDICVSRAVANLSTLSEYCMPLVKP 170
>gi|239624144|ref|ZP_04667175.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520530|gb|EEQ60396.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 241
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--- 66
+ +S +E+ +Y + ++ +K +NL + + + +H DSL +F
Sbjct: 1 MNQESAQLGITLSDVQMEQFYSYYEILVEKNKVMNLTAITEENEVVTKHFSDSLSLFGLL 60
Query: 67 -------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
ID+G+G GFPGI I ++ V L++S NK+ +L V
Sbjct: 61 KEMQVGGDAWYKTCNVIDVGTGAGFPGIPLKIVFPELK---VTLLDSLNKRVKWLEEVCT 117
Query: 120 KTAARGK-VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ G R ++ D+ +RA+A+L +L EY P++
Sbjct: 118 ELHLEGVCCVHGRAEDIGRQAAHREVYDLCVSRAVANLASLSEYCMPFVK 167
>gi|91229125|ref|ZP_01262898.1| glucose-inhibited division protein B [Vibrio alginolyticus 12G01]
gi|269965287|ref|ZP_06179408.1| Glucose inhibited division protein [Vibrio alginolyticus 40B]
gi|91187437|gb|EAS73780.1| glucose-inhibited division protein B [Vibrio alginolyticus 12G01]
gi|269830088|gb|EEZ84316.1| Glucose inhibited division protein [Vibrio alginolyticus 40B]
Length = 211
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + VS + E+L + L KW+K NL S D ++H+ DS+ V H
Sbjct: 8 LDSLIAKTDLEVSEQQREQLVGYVELLDKWNKAYNLTSVRDPLDMLVKHILDSI-VVSAH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 67 LPGERFIDVGTGPGLPGIPLAIMNPEK---TFFLLDSLGKRIRFIKQVVHTLGLKNVTPI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E Q D + +RA A + ++E+ Q+
Sbjct: 124 QSRVEEFQPEEKFDGVLSRAFASMTDMVEWCHHLPKQE 161
>gi|157144376|ref|YP_001451695.1| 16S rRNA methyltransferase GidB [Citrobacter koseri ATCC BAA-895]
gi|166224581|sp|A8ACP6|RSMG_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157081581|gb|ABV11259.1| hypothetical protein CKO_00080 [Citrobacter koseri ATCC BAA-895]
Length = 207
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL+ +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSRLLDEAGISLTDHQKNQLIAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 MAPHLQGERFIDVGTGPGLPGIPLSIVRPE---SHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A LD +L +
Sbjct: 117 ITPVQSRVEEFPSEPPFDGVISRAFASLDDMLSWCRHL 154
>gi|116516833|ref|YP_816609.1| glucose-inhibited division protein B [Streptococcus pneumoniae D39]
gi|148985185|ref|ZP_01818424.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|148989310|ref|ZP_01820690.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|149002659|ref|ZP_01827591.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|149007047|ref|ZP_01830716.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|149012342|ref|ZP_01833411.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|169834139|ref|YP_001694710.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Hungary19A-6]
gi|225856947|ref|YP_002738458.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|237649984|ref|ZP_04524236.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974]
gi|237821110|ref|ZP_04596955.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974M2]
gi|303261605|ref|ZP_07347552.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|303267143|ref|ZP_07353011.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|303268436|ref|ZP_07354231.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|307127124|ref|YP_003879155.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|29336662|sp|Q8DPH3|RSMG_STRR6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122278505|sp|Q04K39|RSMG_STRP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766908|sp|C1CL20|RSMG_STRZP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116077409|gb|ABJ55129.1| methyltransferase GidB [Streptococcus pneumoniae D39]
gi|147759270|gb|EDK66263.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|147761351|gb|EDK68317.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|147763668|gb|EDK70603.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|147922630|gb|EDK73748.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|147925288|gb|EDK76367.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|168996641|gb|ACA37253.1| methyltransferase GidB [Streptococcus pneumoniae Hungary19A-6]
gi|225724396|gb|ACO20248.1| methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|301800198|emb|CBW32806.1| methyltransferase GidB [Streptococcus pneumoniae OXC141]
gi|301802074|emb|CBW34807.1| methyltransferase GidB [Streptococcus pneumoniae INV200]
gi|302637185|gb|EFL67673.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|302642042|gb|EFL72394.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|302643304|gb|EFL73583.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|306484186|gb|ADM91055.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|332074898|gb|EGI85370.1| methyltransferase GidB [Streptococcus pneumoniae GA41301]
Length = 237
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLPLSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|291561654|emb|CBL40453.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SS3/4]
Length = 248
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---- 64
+L +S++ E+ +Y + ++ +K +NL + + + D +H DSL
Sbjct: 8 LLDQGCADLEIELSKQQKEQFFKYYEMLIEKNKVMNLTAITELSDVIKKHFVDSLLLVLA 67
Query: 65 -----VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ ID+G+G GFPGI I ++ + L++S NK+ FL V++
Sbjct: 68 APELGLKLDTSAKYRCIDVGTGAGFPGIPLKIAFPGLK---ITLLDSLNKRVGFLNEVIE 124
Query: 120 KTAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ P+ D+ +RA+A++ TL EY P++ +
Sbjct: 125 TLGLTDINAVHGRAEDYGRDPKYREQYDLCVSRAVANMSTLSEYCIPFVKK 175
>gi|238753971|ref|ZP_04615330.1| Ribosomal RNA small subunit methyltransferase G [Yersinia ruckeri
ATCC 29473]
gi|238707723|gb|EEQ00082.1| Ribosomal RNA small subunit methyltransferase G [Yersinia ruckeri
ATCC 29473]
Length = 207
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + ++ + ++L + L KW+K NL S E IRH+ DS+ V H
Sbjct: 6 LESLLKIAGISLPDKQKQQLVGYVELLHKWNKAYNLTSVRDPEQMLIRHILDSI-VVNPH 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 65 LQGQRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELGLNNIEPV 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A LD +L +
Sbjct: 122 QSRVEDFSGEPGFDGVISRAFASLDDMLSWCHHL 155
>gi|308051497|ref|YP_003915063.1| 16S rRNA m(7)G-527 methyltransferase [Ferrimonas balearica DSM
9799]
gi|307633687|gb|ADN77989.1| 16S rRNA m(7)G-527 methyltransferase [Ferrimonas balearica DSM
9799]
Length = 207
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ VS E +L + KW+K NL S D +H+ DS+ V H +I
Sbjct: 13 SGLTVSAEQQAQLVELVRMLDKWNKAYNLTSVRDPMDMLEKHILDSI-VVGPHLQGRRFI 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+G+G G PG+ +I E L++S K+ F+R V+ EA
Sbjct: 72 DVGTGPGLPGLPLAICNPDKE---FVLLDSLGKRIRFIRQVIHSLGLTNVTAVESRVEAY 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
Q DV+ +RA A L+ +L +
Sbjct: 129 QPDPGFDVVLSRAFASLEDMLTWCAHL 155
>gi|295693715|ref|YP_003602325.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
crispatus ST1]
gi|295031821|emb|CBL51300.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus ST1]
Length = 240
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + +E+ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPEKFILELSKHNFKLTDQQIEQFKIYFNYLIEVNENVNLTRITEEDEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I ++ + +++S K+ +FL+ ++ K
Sbjct: 61 PLFTFGDVFKDGATLCDVGAGAGFPSIPLKILQPELK---ITIVDSLAKRLTFLKNLITK 117
Query: 121 TAAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 118 LDLKDVELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKK 167
>gi|254700690|ref|ZP_05162518.1| 16S rRNA methyltransferase GidB [Brucella suis bv. 5 str. 513]
gi|261751199|ref|ZP_05994908.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
5 str. 513]
gi|261740952|gb|EEY28878.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
5 str. 513]
Length = 213
Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 66/146 (45%), Positives = 89/146 (60%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
V++ARALA L L + PWL
Sbjct: 137 IPQVVTARALASLGDLFTLAEPWLSD 162
>gi|114705862|ref|ZP_01438765.1| putative GidB, Glucose inhibited division protein [Fulvimarina
pelagi HTCC2506]
gi|114538708|gb|EAU41829.1| putative GidB, Glucose inhibited division protein [Fulvimarina
pelagi HTCC2506]
Length = 248
Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats.
Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
++VSRETL L+ + + W ++NLV+ ST+ W RH+ DSL++ P
Sbjct: 47 DRERFTARFDVSRETLTALDRYVAMLTDWQTRMNLVAPSTLATVWERHIADSLQLEAFLP 106
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
DLGSGGG PGI+ +I + V+L+ES KKA+FLR V + V A
Sbjct: 107 PFETGADLGSGGGLPGIVIAIMRPEAK---VHLVESVGKKATFLRAVADELGLNTHVHAR 163
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
RI+ + + +V++ARA+A LD LL P +
Sbjct: 164 RIEASGHALRQSEVVTARAVASLDRLLGLVSPHI 197
>gi|307704983|ref|ZP_07641870.1| methyltransferase GidB [Streptococcus mitis SK597]
gi|307621434|gb|EFO00484.1| methyltransferase GidB [Streptococcus mitis SK597]
Length = 237
Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + ++ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLPLSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNENIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|261410103|ref|YP_003246344.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
gi|261286566|gb|ACX68537.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
Length = 240
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
+ + + L + E +Y + ++W++K+NL + E + +H DS+ +
Sbjct: 15 HGITIDEKQLHQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSITLAFYVDMNKIGN 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+GSG GFPGI I ++ + +++S NK+ +FL++V G ++ R +
Sbjct: 75 LADIGSGAGFPGIPLKICFPHLK---LTIVDSLNKRITFLKHVADTLGLSGIELIHGRAE 131
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
E + D+++ARA+A + L E+ P+
Sbjct: 132 EVARKHGYRDGFDLVTARAVARMAVLNEFCLPFTK 166
>gi|325684926|gb|EGD27070.1| glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 239
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L A L + +S ++ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPELFAETLSKYNFKLSPVQEQQFKTYFKELVRANEHVNLTRITDEDEVYLKHFYDSVT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L P D+G+G GFP + I +E V +++S K+ +FL +++K
Sbjct: 61 PLLLWPEVFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEK 117
Query: 121 TAAR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P D+++ARA+A + L EY P
Sbjct: 118 LGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAK 166
>gi|167770825|ref|ZP_02442878.1| hypothetical protein ANACOL_02178 [Anaerotruncus colihominis DSM
17241]
gi|167666865|gb|EDS10995.1| hypothetical protein ANACOL_02178 [Anaerotruncus colihominis DSM
17241]
Length = 237
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 10 LRANYLLNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
+ Y + V+ + L+ + + L ++W+ K+NL + + ++ I+H DSL
Sbjct: 6 MLKEYAA-GFGVTLDTAQLDAFDRYAALLVEWNAKMNLTAITEPQEIVIKHFVDSLSLLS 64
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P + +D+G+G GFP + I + + L++S NK+ +FL+ + Q
Sbjct: 65 LCPIPQGARLVDVGTGAGFPSVPLKIARPDL---HLTLLDSLNKRITFLQELSQSLGQDN 121
Query: 126 KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ R +EA + D+ +RA+A L L EY P++
Sbjct: 122 ECIHARAEEAGRSPVYREKYDMAVSRAVARLYELSEYCLPFVR 164
>gi|328541702|ref|YP_004301811.1| ribosomal RNA small subunit methyltransferase G [polymorphum gilvum
SL003B-26A1]
gi|326411454|gb|ADZ68517.1| Ribosomal RNA small subunit methyltransferase G [Polymorphum gilvum
SL003B-26A1]
Length = 236
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 65/148 (43%), Positives = 88/148 (59%), Gaps = 2/148 (1%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET E+L + L L+W NL++ ST+ + W RHV DSL+ P W+DLGS
Sbjct: 32 VSRETAERLRIYVDLLLRWQPAQNLIAPSTIPEIWRRHVADSLQPHLCLPEARRWVDLGS 91
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM-- 138
G GFPG++T+I L+ G V L+ES +KA+FLR +++T A G V A RI+ +
Sbjct: 92 GAGFPGVVTAILLADKPGAHVYLVESNQRKAAFLRTALRETGAPGTVLAQRIESVAERWS 151
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
D +SARALA L L YS +L Q
Sbjct: 152 HGPVDAVSARALAPLVDLCRYSRAFLAQ 179
>gi|134096564|ref|YP_001101639.1| 16S rRNA methyltransferase GidB [Herminiimonas arsenicoxydans]
gi|189045854|sp|A4GAI1|RSMG_HERAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|133740467|emb|CAL63518.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Herminiimonas arsenicoxydans]
Length = 218
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +S + KL + L +KW+ NL + +H+ DSL +D
Sbjct: 21 SLTLSEAQITKLIDYLALMVKWNSVYNLTAVRDPLQMVTQHLLDSLAAVSAFAGAKNVLD 80
Query: 78 LGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
+G+GGG PGI+ +I + E V+LI++ +KK +FL V + E
Sbjct: 81 VGAGGGLPGIVLAIWAAEAEPEMRVSLIDTVHKKTAFLTQVKAELGLANVSVHTARVEQW 140
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
DVI++RA A+L+ + +S L +
Sbjct: 141 NAPHKFDVITSRAFAELNDFVNWSGHLLDE 170
>gi|306829253|ref|ZP_07462443.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
gi|304428339|gb|EFM31429.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
Length = 245
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 12 ETFYSLLVEQNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPIL 71
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 72 QGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELNLD 128
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+++ARA+A + L E + P+L
Sbjct: 129 GVHFYHGRAEDFAQDKNFRAQFDMVTARAVARMQVLSELTIPYLK 173
>gi|303254470|ref|ZP_07340575.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|303258921|ref|ZP_07344900.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|303264274|ref|ZP_07350194.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
gi|302598556|gb|EFL65597.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|302639864|gb|EFL70320.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|302646086|gb|EFL76313.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
Length = 237
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLPLSDQQKEQFECYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|317496585|ref|ZP_07954933.1| glucose inhibited division protein [Gemella moribillum M424]
gi|316913292|gb|EFV34790.1| glucose inhibited division protein [Gemella moribillum M424]
Length = 237
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
+S ++ E ++ L ++W++KINL + + E+F+ +H DS+ + Y D+
Sbjct: 18 LSDIQKKQYEKYFELVVEWNQKINLTAITEEEEFYTKHFYDSISLSFYRDYSKVSNICDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQ 137
GSG GFP I I +E +V+ + + K + L+ + T A + +
Sbjct: 78 GSGAGFPSIPLKILYPHLEVTIVDSLNKRIKFLNLLQEELGLTNCNFIHARAEEVGQDKN 137
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++++ARA+A L+ L+E P + +
Sbjct: 138 FRESFEIVTARAVARLNVLVELCLPLVKK 166
>gi|254713537|ref|ZP_05175348.1| 16S rRNA methyltransferase GidB [Brucella ceti M644/93/1]
gi|254716108|ref|ZP_05177919.1| 16S rRNA methyltransferase GidB [Brucella ceti M13/05/1]
gi|261217879|ref|ZP_05932160.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M13/05/1]
gi|261321271|ref|ZP_05960468.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M644/93/1]
gi|260922968|gb|EEX89536.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M13/05/1]
gi|261293961|gb|EEX97457.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M644/93/1]
Length = 213
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIKSMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|229106076|ref|ZP_04236689.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
gi|228677342|gb|EEL31606.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
Length = 239
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N + L +S LE+ + ++ ++W++K+NL + + E+ +++H D +
Sbjct: 1 MNIEQFQSMLEEKGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P D+G+G GFP I I ++ V +++S K+ +FL ++ QK
Sbjct: 61 AAFYYDFSKPFSICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLE 117
Query: 123 ARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLY 165
F E + + +++ ARA+A L L E P +
Sbjct: 118 LSDVAFCHDRAETFGKKEGVRESYEIVMARAVARLSVLSELCLPLVK 164
>gi|15890075|ref|NP_355756.1| glucose-inhibited division protein B [Agrobacterium tumefaciens
str. C58]
gi|22095725|sp|Q8UBM1|RSMG_AGRT5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15158060|gb|AAK88541.1| glucose inhibited division protein [Agrobacterium tumefaciens str.
C58]
Length = 205
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 84/148 (56%), Positives = 109/148 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+N +VSRET E+LE+F LF KW+K NLV+ ST+ + W RHV DS ++FQL P P W
Sbjct: 3 INGQSVSRETQERLEHFVELFKKWNKTTNLVAPSTLTELWSRHVADSAQIFQLSPQPKKW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
IDLGSGGGFPG+IT+I L+ + G V+L+ES NKKA+FLR +++T ARG V RI+ A
Sbjct: 63 IDLGSGGGFPGVITAIFLAELGDGWVDLVESNNKKAAFLRIALKETGARGAVHPVRIETA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
++ITTC+ +SARALADLD L Y PW
Sbjct: 123 SEIITTCNAVSARALADLDLLFGYIHPW 150
>gi|209515786|ref|ZP_03264649.1| methyltransferase GidB [Burkholderia sp. H160]
gi|209503813|gb|EEA03806.1| methyltransferase GidB [Burkholderia sp. H160]
Length = 227
Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
++S E KL + L KW+ NL + I+H+ DSL + PS
Sbjct: 25 GLDLSDEQQRKLLDYVALLAKWNNVYNLTAIRDPRQMLIQHILDSLSIVPHLALRGPSAA 84
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+GSGGG PGI+ +I L V + +KK +F + V R++
Sbjct: 85 LDVGSGGGLPGIVLAIVLPDW---TVTTNDIVHKKTAFQAQAKAELGLANLSVVTGRVET 141
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWLYQK 167
DVI +RA A+L + + + ++
Sbjct: 142 LRPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|116617470|ref|YP_817841.1| cell division SAM-dependent methyltransferase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|122272329|sp|Q03ZA4|RSMG_LEUMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116096317|gb|ABJ61468.1| 16S rRNA m(7)G-527 methyltransferase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 239
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N ++ + + + E +Y L + ++ +NL + + +D +++H DSL V
Sbjct: 3 NEDFIEALSSAGITLTTQQVRQFERYYELLVATNEHVNLTAITEKKDVYLKHFYDSLTVA 62
Query: 67 QLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
ID+G+G GFP + I ++ + ++++ K+ +FL+ VV
Sbjct: 63 MYEQKLKSSESTLIDIGTGAGFPSLPLKIAFPDLK---ITMVDALKKRVNFLQEVVDTLD 119
Query: 123 AR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R ++ P+ D +ARA+A L EY+ P++
Sbjct: 120 LTGVEIVHGRAEDIGQNPKYRENFDYATARAVARTSVLAEYTLPFVK 166
>gi|125974848|ref|YP_001038758.1| methyltransferase GidB [Clostridium thermocellum ATCC 27405]
gi|256003895|ref|ZP_05428882.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281418697|ref|ZP_06249716.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|189039498|sp|A3DHY6|RSMG_CLOTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125715073|gb|ABN53565.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium thermocellum ATCC
27405]
gi|255992233|gb|EEU02328.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281407781|gb|EFB38040.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|316941970|gb|ADU76004.1| methyltransferase GidB [Clostridium thermocellum DSM 1313]
Length = 242
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDL 78
N+ E ++K + + +W++K+NL + E+ ++H DS+ + + ++ ID+
Sbjct: 22 NLDDEQIDKFFAYKDVLKEWNQKMNLTAIEDDEEIILKHFIDSISICPIIKDKNLALIDV 81
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA-- 135
G+G GFPGI I ++ V L++S K+ FL V+++ + R +E
Sbjct: 82 GTGAGFPGIPVKIVFPELK---VKLLDSLEKRTKFLNEVIERLDLKDISTVHARAEEKGV 138
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
P D+ ARA+A L LLEY P++
Sbjct: 139 DPDYREKYDISVARAVASLPVLLEYCLPFVK 169
>gi|269962682|ref|ZP_06177027.1| Glucose inhibited division protein [Vibrio harveyi 1DA3]
gi|269832605|gb|EEZ86719.1| Glucose inhibited division protein [Vibrio harveyi 1DA3]
Length = 211
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A VS + E+L + L KW+K NL S + ++H+ DS+ V H
Sbjct: 8 LDALIAQTDLEVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 67 LPGERFIDVGTGPGLPGIPLAIMNPEK---TFFLLDSLGKRIRFIKQVVHTLGLKNVTAI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A + ++E+ Q
Sbjct: 124 QSRVEEFQPEEKFDGVLSRAFASMTDMVEWCHHLPKQ 160
>gi|195978770|ref|YP_002124014.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689834|sp|B4U4T4|RSMG_STREM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|195975475|gb|ACG63001.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 237
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+ ++ E+ + ++ L + W++KINL + + + +++H DS+ P+
Sbjct: 14 GFALTNHQKEQFDTYFKLLVDWNRKINLTAITEENEVYLKHFYDSVAPLLQGYIPNEPLR 73
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
+D+G+G GFP I I ++ V +I+S NK+ FL+ + ++ + R +
Sbjct: 74 LLDIGAGAGFPSIPMKIMFPKLD---VTIIDSLNKRIHFLQLLAKELGLEGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ Q D+++ARA+A + L E + P+L K
Sbjct: 131 DFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIK 167
>gi|225871173|ref|YP_002747120.1| methyltransferase GidB [Streptococcus equi subsp. equi 4047]
gi|254766903|sp|C0M821|RSMG_STRE4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225700577|emb|CAW95086.1| methyltransferase GidB [Streptococcus equi subsp. equi 4047]
Length = 237
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+ ++ E+ + ++ L + W++KINL + + + +++H DS+ P+
Sbjct: 14 GFALTNHQKEQFDTYFKLLVDWNRKINLTAITEENEVYLKHFYDSVAPLLQGYIPNEPLR 73
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
+D+G+G GFP I I ++ V +I+S NK+ FL+ + ++ + R +
Sbjct: 74 LLDIGAGAGFPSIPMKIMFPKLD---VTIIDSLNKRIHFLQLLAKELGLEGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ Q D+++ARA+A + L E + P+L K
Sbjct: 131 DFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIK 167
>gi|161870873|ref|YP_001600047.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis 053442]
gi|189045868|sp|A9M3R8|RSMG_NEIM0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161596426|gb|ABX74086.1| glucose inhibited division protein B [Neisseria meningitidis
053442]
Length = 207
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++ ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDILETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDVR--ADVITSRAFAELADFVSWTGHLLKD 159
>gi|156972767|ref|YP_001443674.1| glucose-inhibited division protein B [Vibrio harveyi ATCC BAA-1116]
gi|166224628|sp|A7N0X5|RSMG_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156524361|gb|ABU69447.1| hypothetical protein VIBHAR_00432 [Vibrio harveyi ATCC BAA-1116]
Length = 211
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L VS + E+L + L KW+K NL S + ++H+ DS+ V H
Sbjct: 8 LDELIAQTDLEVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 67 LPGERFIDVGTGPGLPGIPLAIMNPEK---TFFLLDSLGKRIRFIKQVVHTLGLKNVTAI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A + ++E+ Q
Sbjct: 124 QSRVEEFQPEEKFDGVLSRAFASMTDMVEWCHHLPKQ 160
>gi|322391720|ref|ZP_08065187.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
gi|321145430|gb|EFX40824.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
Length = 237
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+++ + + E+++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLSLTEQQKMQFEHYFQLLVEWNEKINLTAITDKEEVYLKHFYDSVAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP I I ++E V +I+S NK+ +FL+ + + + R +
Sbjct: 74 LLDIGAGAGFPSIPMKILYPNLE---VTIIDSLNKRINFLQLLAGELGLEGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+++ARA+A + L E + P+L
Sbjct: 131 DFAQDKNFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|315223095|ref|ZP_07864963.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
gi|315187784|gb|EFU21531.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
Length = 238
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+ ++ ++ E ++ L ++W++ INL + + ++ +++H DS+ +
Sbjct: 11 LKQHQIELTDRQKQQFERYFELLVEWNENINLTAITDKKEVYLKHFYDSIAPILQGLIDN 70
Query: 74 IWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
I D+G+G GFP + I ++ V +I+S NK+ FL ++ + + +
Sbjct: 71 KGIKLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRILFLNHLADELGLEKVHFYH 127
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ DV++ARA+A + L E + P+L
Sbjct: 128 GRAEDFAQDKDFRAQFDVVTARAVARMQVLAELTIPFLK 166
>gi|148656341|ref|YP_001276546.1| 16S rRNA methyltransferase GidB [Roseiflexus sp. RS-1]
gi|189040818|sp|A5UVE3|RSMG_ROSS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148568451|gb|ABQ90596.1| methyltransferase GidB [Roseiflexus sp. RS-1]
Length = 234
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L + + +E+ + W+ ++NL + + E RH DSLR
Sbjct: 2 DMLLNTARAWGLRLDQRQIEQFARYSAELRAWNTRVNLTAITDEEGIVARHFLDSLRCAL 61
Query: 68 LHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
ID+GSG GFPG+ I + V L+ES KKA+FLR+++ R
Sbjct: 62 SWGDAPSSLIDIGSGAGFPGLPLKILRPELR---VALVESVGKKAAFLRHMITVLDLRDV 118
Query: 127 VF----ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + PQ DV++ARA+A+L TL EY P
Sbjct: 119 TVLTARAETVGRDPQHREQYDVVTARAVAELATLAEYCLPL 159
>gi|300719170|ref|YP_003743973.1| methyltransferase, glucose-inhibited division protein B [Erwinia
billingiae Eb661]
gi|299065006|emb|CAX62126.1| Methyltransferase, Glucose-inhibited division protein B [Erwinia
billingiae Eb661]
Length = 206
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + T ++S + +L + + KW+K NL S E IRH+ DS+ V + H
Sbjct: 5 LTSLLKAATISLSDQQKNQLVGYVEMLHKWNKAYNLTSVRDPEQMLIRHIMDSI-VVEPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
S +ID+G+G G PG+ +I L++S K+ FL+ V + +
Sbjct: 64 LQGSRFIDVGTGPGLPGVPLAIVRPD---AHFTLLDSLGKRIRFLKQVQHELKLVNIEPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ P D + +RA A L+ +L +
Sbjct: 121 QSRVEDFPA-EPPFDGVISRAFASLNDMLNWCHHL 154
>gi|259417839|ref|ZP_05741758.1| 16S rRNA methyltransferase GidB [Silicibacter sp. TrichCH4B]
gi|259346745|gb|EEW58559.1| 16S rRNA methyltransferase GidB [Silicibacter sp. TrichCH4B]
Length = 205
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 66/157 (42%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ + +VSRET E+LE F + KW+ KINLVS ++ED W RH+ DS++VF++
Sbjct: 1 MNFELVREYSDVSRETFERLEVFSEVLTKWNPKINLVSRKSLEDLWTRHILDSVQVFEIA 60
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVF 128
P W+D+GSGGG PG+I +I + V L+ES +K +FLR ++ + V
Sbjct: 61 PNAKTWLDIGSGGGLPGVIVAILAADKSPETKVTLMESDQRKCAFLRNAARECDVQVTVK 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ RI+EA + V+SARALADLD LL YS L
Sbjct: 121 SQRIEEAEP--ESAGVMSARALADLDILLGYSERHLK 155
>gi|329668022|gb|AEB93970.1| glucose inhibited division protein B [Lactobacillus johnsonii DPC
6026]
Length = 239
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N I + ++ + ++ +Y ++++KK+NL + + +++H DS+
Sbjct: 1 MNPEIFAKELAKYGFELNEKQQKQFATYYDKLVEFNKKVNLTRITDKNEVYLKHFFDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP + I ++ + +++S K+ FL +V
Sbjct: 61 PLLEFPDLFKGEKTLCDVGAGAGFPSLPIKILCPNL---SITIVDSLGKRLKFLDELVND 117
Query: 121 TAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++A + D+++ RA+A + L EY P
Sbjct: 118 LDLDKVTLVHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPLAK 166
>gi|227432682|ref|ZP_03914655.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227351564|gb|EEJ41817.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 239
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N ++ + + + E +Y L + ++ +NL + + +D +++H DSL V
Sbjct: 3 NEDFIEALSSAGITLTTQQVRQFERYYELLVATNEHVNLTAITEKKDVYLKHFYDSLTVA 62
Query: 67 QLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
ID+G+G GFP + I ++ + ++++ K+ +FL+ VV
Sbjct: 63 MYEQKLKSSESTLIDIGTGAGFPSLPLKIAFPDLK---ITMVDALKKRVNFLQEVVDTLD 119
Query: 123 AR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R ++ P+ D +ARA+A L EY+ P++
Sbjct: 120 LTGVEIVHGRAEDIGQNPKYRENFDYATARAVARTSVLAEYTLPFVK 166
>gi|94989784|ref|YP_597884.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10270]
gi|166224620|sp|Q1JII3|RSMG_STRPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94543292|gb|ABF33340.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10270]
Length = 237
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ + +S + E+ + ++ L ++W+ KINL + + + +++H DS+ +
Sbjct: 12 KDGFLLSSKQKEQFDTYFKLLVEWNTKINLTAITEKNEVYLKHFYDSIAPILQGFLANEP 71
Query: 76 I---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
I D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 72 IKLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGR 128
Query: 132 IQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ DV++ARA+A + L E + P+L
Sbjct: 129 AEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|238853720|ref|ZP_04644087.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
gi|238833656|gb|EEQ25926.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
Length = 239
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + A L N + +S + E+ +Y ++++KK+NL + + +++H DS+
Sbjct: 1 MNPEIFAEELANYGFKLSSKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP + I + + +++S K+ FL +V
Sbjct: 61 PLLEFSDLFKGEKSLCDVGAGAGFPSLPIKILCPDL---SITIVDSLGKRLKFLDELVSD 117
Query: 121 TAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + R ++A + D+++ RA+A + L EY P
Sbjct: 118 LSLDKVTLVHSRAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCLPLAK 166
>gi|229826127|ref|ZP_04452196.1| hypothetical protein GCWU000182_01492 [Abiotrophia defectiva ATCC
49176]
gi|229789700|gb|EEP25814.1| hypothetical protein GCWU000182_01492 [Abiotrophia defectiva ATCC
49176]
Length = 239
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S++ ++ E +KL FY + + +K +NL + + E+F I+H DSL + +
Sbjct: 5 SLIIKKLENEGITITSEQCDKLYRFYEMVTEKNKVMNLTAITDYEEFVIKHFVDSLMIAK 64
Query: 68 LHPYPSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR- 124
+ + D+G+G GFPG+ I + + V L++S NK+ +FL V+++ +
Sbjct: 65 VMDMKAPMTVLDIGTGAGFPGVPIKIVYPATK---VLLLDSLNKRLNFLNEVIEELGLKD 121
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R +E + D+ +RA++ L TL EY P++
Sbjct: 122 ITTIHSRAEELQAKGEYRENFDLCVSRAVSALPTLSEYCLPYVK 165
>gi|225867913|ref|YP_002743861.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
gi|259495620|sp|C0MG47|RSMG_STRS7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225701189|emb|CAW98104.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
Length = 237
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+ ++ E+ + ++ L + W++KINL + + + +++H DS+ P+
Sbjct: 14 GFALTNHQKEQFDTYFKLLIDWNRKINLTAITEENEVYLKHFYDSVAPLLQGYIPNEPLR 73
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
+D+G+G GFP I I ++ V +I+S NK+ FL+ + ++ + R +
Sbjct: 74 LLDIGAGAGFPSIPMKIMFPKLD---VTIIDSLNKRIQFLQLLAKELGLEGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ Q D+++ARA+A + L E + P+L K
Sbjct: 131 DFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIK 167
>gi|307706750|ref|ZP_07643555.1| methyltransferase GidB [Streptococcus mitis SK321]
gi|307617835|gb|EFN96997.1| methyltransferase GidB [Streptococcus mitis SK321]
Length = 237
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDSVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DLAQDKNFRAHYDFVTARAVARMQVLSELTIPYLK 165
>gi|256045662|ref|ZP_05448540.1| 16S rRNA methyltransferase GidB [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992084|ref|ZP_06104641.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. Rev.1]
gi|263003150|gb|EEZ15443.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. Rev.1]
Length = 213
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 66/146 (45%), Positives = 89/146 (60%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGF GI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFRGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|291520337|emb|CBK75558.1| 16S rRNA m(7)G-527 methyltransferase [Butyrivibrio fibrisolvens
16/4]
Length = 226
Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWI 76
+ + + + +L+ FY L ++ +K +NL + + ++ I+H DSL + +
Sbjct: 16 NFALIEKQISQLDLFYELLVEKNKVMNLTAITEFDEVIIKHFADSLSICTVLPDSVKTVC 75
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEA 135
DLG+G GFPGI +I S++ LI+S NK+ FL+ VV R +EA
Sbjct: 76 DLGTGAGFPGIPMAIAFPSLQ---FTLIDSLNKRIKFLQEVVDALGLNNVTLIHARAEEA 132
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
D++ +RA+A++ TL EY P +
Sbjct: 133 GRNKLYRENFDLVVSRAVANISTLSEYCLPLV 164
>gi|307823024|ref|ZP_07653254.1| methyltransferase GidB [Methylobacter tundripaludum SV96]
gi|307735799|gb|EFO06646.1| methyltransferase GidB [Methylobacter tundripaludum SV96]
Length = 211
Score = 110 bits (274), Expect = 7e-23, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL + NV+ E +++L F L KW+K NL + E+ H+ DSL +
Sbjct: 6 EILVSGIASLNLNVTDEKIDQLLSFIKLIEKWNKAYNLTAIRDREEMARLHILDSLAIVP 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
ID+G+G G PGI +I L I+ L++S KK F++ VV + +
Sbjct: 66 HIE-GKRVIDIGTGAGLPGIPLAICLPEID---FTLLDSNAKKTRFVQQVVLELKLKNVE 121
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E T D + RA A L +++ + L +
Sbjct: 122 VLHSRVENYHPEKTYDAVLTRAFAGLSDIVKLTAHLLSK 160
>gi|160882057|ref|YP_001561025.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
gi|189039497|sp|A9KLX7|RSMG_CLOPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160430723|gb|ABX44286.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
Length = 242
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
NS ++++ LE+ E +Y L ++W+ +NL + + E+ +H DSL +
Sbjct: 4 NSTFIQGLRSLGMDLNKHQLEQFEIYYDLLIEWNSFMNLTAITEYEEVIQKHFLDSLSLI 63
Query: 67 QLHPYPSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ + + D+G+G GFPGI I + V L++S NK+ +FL V+ +
Sbjct: 64 KSYQIKTGDTLLDMGTGAGFPGIPLKIAYPDLN---VLLMDSLNKRINFLNEVINRLELK 120
Query: 124 RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E D++ +RA+A +L E P++ +
Sbjct: 121 NISAMHGRAEEQARKLDFREKFDIVVSRAVARTASLAELCLPYVKK 166
>gi|329767566|ref|ZP_08259087.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
gi|328839193|gb|EGF88777.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
Length = 237
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIW 75
+S E+ +Y L ++W++KINL + + ++F+ +H DS+ ++ +
Sbjct: 15 GIELSELQKEQYSKYYDLVVEWNQKINLTAITEEDEFYTKHFFDSISLAFYKDYSNIESI 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
D+GSG GFP I I +++ +V+ + + K + ++ + + A +
Sbjct: 75 CDVGSGAGFPSIPLKILYPNLKVTIVDSLNKRIKFLNLVKDELGLSDCNFVHARAEEFGQ 134
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++++ARA+A L+ L E P + +
Sbjct: 135 NKDYRESFEIVTARAVARLNVLAELCLPLVKK 166
>gi|332523926|ref|ZP_08400178.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
gi|332315190|gb|EGJ28175.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
Length = 237
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
Y+++++ ++ ++ ++W++KINL + + D +++H DS+ + P
Sbjct: 14 GYDLTQKQKDQFNTYFNTLIEWNQKINLTAITEKNDVYLKHFYDSIAPILQGYIPNQPIQ 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL ++ Q+ G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKIVFPQLQ---VTIIDSLNKRITFLAHLTQELGLDGVAFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKDFRSKYDLVTARAVARMQILSELTIPFLK 165
>gi|254560704|ref|YP_003067799.1| methyltransferase gidB [Methylobacterium extorquens DM4]
gi|254267982|emb|CAX23850.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Methylobacterium extorquens DM4]
Length = 234
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 83/150 (55%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L+ ++VSRET + + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 32 VLSEHHVSRETAASFDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLTVAPEATR 91
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W+DLGSG G PG+I +I G V L+ES +K +FL + T A V RI+
Sbjct: 92 WLDLGSGAGIPGLILAIAGKERPGFHVRLVESNARKCAFLSETARLTGAPVTVHNARIEA 151
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+T +++ ARALA L LL ++ P L
Sbjct: 152 VIGTLTDTEIVCARALAPLSQLLAWTEPLL 181
>gi|313112544|ref|ZP_07798209.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625144|gb|EFQ08434.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 235
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ L++L+ F + + +++K+NL + + E +H DSL +D
Sbjct: 15 NITLTGTQLDQLDAFAEILVDYNQKVNLTAITDPEGIEDKHFLDSLLFASQPEVAGRMVD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--- 134
+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA E
Sbjct: 75 VGAGAGFPGIVTKIYKPELE---LTLMEPTGKRVEFLKYACAQLGLTGVEFAKERAEEAA 131
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
D+ SARA+A L L EY P +
Sbjct: 132 RKAWREQFDLASARAVAALPMLAEYCLPLVK 162
>gi|313472996|ref|ZP_07813483.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
gi|313448827|gb|EEQ67802.2| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
Length = 264
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + ++++ +++ +Y ++ ++ +NL + +E+ +++H DSL F
Sbjct: 4 ELFIKQLAEKGFALNQKQIDQFSKYYKKLIEVNEYVNLTRITDLEEVYLKHFYDSLTPFL 63
Query: 68 LHPYPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+P D+G+G GFP I I + ++ +V+ + + K + L + +
Sbjct: 64 EYPDLFKKGHICDVGAGAGFPSIPIKILVPEMQLAIVDSLNKRLKFLADLTADLD--LEQ 121
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ + D+++ARA+A++ TL EY P + +
Sbjct: 122 VELIHGRAEDVGQNEKYREKFDLVTARAVANMATLSEYCLPLVKK 166
>gi|27375743|ref|NP_767272.1| 16S rRNA methyltransferase GidB [Bradyrhizobium japonicum USDA 110]
gi|55976511|sp|Q89WP6|RSMG_BRAJA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27348881|dbj|BAC45897.1| gidB [Bradyrhizobium japonicum USDA 110]
Length = 260
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ DS L VSRET +L+ + L +W K NLV+ ST+ W RH+ D
Sbjct: 46 RSLDSVIAADKIAALKLAPVSRETEARLDRYIALLREWQAKTNLVAPSTLPHLWTRHIAD 105
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL++ L P W DLGSGGGFPG++ + ++ G V+L+E KKA+FLR ++ T
Sbjct: 106 SLQLVDLAPTARRWADLGSGGGFPGVVLACTMAETPGASVHLVERIAKKAAFLREAIRIT 165
Query: 122 AARGKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ G V I + ++ D ++ARALA L L+ ++ P + Q
Sbjct: 166 TSPGVVHLAEIGDNVDRITGPVDCVTARALAPLHQLIGFAEPLMRQ 211
>gi|319407870|emb|CBI81523.1| glucose inhibited division protein B [Bartonella sp. 1-1C]
Length = 219
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
KY D I+ + VSRET++ L F L ++W+ INL+S++T+ W RH+ D
Sbjct: 8 KYQDILEIIPS--------VSRETMKHLIEFESLVIQWNIHINLISATTIPVLWKRHILD 59
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S +++ L W DLGSGGGFP I+ +I L +GG ++L+ES KKA+FLR V+ K
Sbjct: 60 SAQIYPLKSQFLHWCDLGSGGGFPAIVLAILLKEKKGGHIDLVESNGKKAAFLRNVIAKL 119
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V CRI+ + I T D+++AR LA LDTLL PWL QK
Sbjct: 120 NLPATVHHCRIENVYKKIKTPDILTARGLASLDTLLHLMSPWLTQK 165
>gi|255283804|ref|ZP_05348359.1| 16S rRNA methyltransferase GidB [Bryantella formatexigens DSM
14469]
gi|255265687|gb|EET58892.1| 16S rRNA methyltransferase GidB [Bryantella formatexigens DSM
14469]
Length = 261
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++S++ L + E +Y L +KW+ +NL + + E+ +H DSL + + I
Sbjct: 39 GIDLSQKQLLQFEKYYELLIKWNSLMNLTAITEHEEVLKKHFLDSLSIVKTVDMTKIHTL 98
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+G+G GFPGI I ++ V L++S K+ FL +V ++ R ++
Sbjct: 99 MDVGTGAGFPGIPLKISYPHLK---VVLLDSLGKRVKFLNHVTEELGLEDISAIHGRAED 155
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+ +RA+A+L +L EY P+ +
Sbjct: 156 FARQEKYRESFDLCVSRAVANLSSLSEYCIPYTKK 190
>gi|116512182|ref|YP_809398.1| glucose-inhibited division protein B [Lactococcus lactis subsp.
cremoris SK11]
gi|123125536|sp|Q02YJ6|RSMG_LACLS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116107836|gb|ABJ72976.1| 16S rRNA m(7)G-527 methyltransferase [Lactococcus lactis subsp.
cremoris SK11]
Length = 238
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSI 74
+S + +++ E ++ L ++W++KINL + + + +++H DS+ P
Sbjct: 14 DIQLSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSVAPILYGLITDQPVS 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+D+G+G GFP + I +E V +I+S NK+ +FL + ++ + R +
Sbjct: 74 ILDIGAGAGFPSLPMKIIFPELE---VTIIDSLNKRINFLSLLTEELGLENVTLLHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T D ++ARA+A L L E++ +L +
Sbjct: 131 DFGQDSNYRATFDFVTARAVARLSVLSEFTISFLKK 166
>gi|300362899|ref|ZP_07059069.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
gi|300352949|gb|EFJ68827.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
Length = 239
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + A L N + +S + E+ +Y ++++KK+NL + + +++H DS+
Sbjct: 1 MNPEIFAEELANYGFKLSSKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP + I + + +++S K+ FL +V
Sbjct: 61 PLLEFSDLFKGEKSLCDVGAGAGFPSLPIKILCPDL---SITIVDSLGKRLKFLDELVSD 117
Query: 121 TAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + R ++A + D+++ RA+A + L EY P
Sbjct: 118 LSLDKVTLVHSRAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCLPLAK 166
>gi|26986748|ref|NP_742173.1| 16S rRNA methyltransferase GidB [Pseudomonas putida KT2440]
gi|148550505|ref|YP_001270607.1| 16S rRNA methyltransferase GidB [Pseudomonas putida F1]
gi|60392324|sp|P0A124|RSMG_PSEPK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|60392325|sp|P0A125|RSMG_PSEPU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|166224604|sp|A5WBB3|RSMG_PSEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24981338|gb|AAN65637.1|AE016190_3 glucose-inhibited division protein B [Pseudomonas putida KT2440]
gi|581464|emb|CAA44420.1| unnamed protein product [Pseudomonas putida]
gi|148514563|gb|ABQ81423.1| methyltransferase GidB [Pseudomonas putida F1]
Length = 216
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLG 79
++ E EKL + L +KW+K NL + ++ RH+ DSL V +H W+D+G
Sbjct: 24 LTAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFIHNDRDNWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGG PGI +I V ++++ KK FL V + EA Q
Sbjct: 84 SGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELKLDNLTVIHSRVEAFQPA 140
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
D I +RA + ++ ++
Sbjct: 141 QPFDGIISRAFSSMENFTNWTRHL 164
>gi|15903207|ref|NP_358757.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae R6]
gi|182684218|ref|YP_001835965.1| glucose-inhibited division protein B [Streptococcus pneumoniae
CGSP14]
gi|15458795|gb|AAK99967.1| Glucose inhibited division protein B [Streptococcus pneumoniae R6]
gi|182629552|gb|ACB90500.1| glucose-inhibited division protein B [Streptococcus pneumoniae
CGSP14]
Length = 245
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 22 NLPLSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 81
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 82 LLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAE 138
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 139 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 173
>gi|298252131|ref|ZP_06975934.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
gi|297546723|gb|EFH80591.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
Length = 247
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPS 73
L +S E + L+W+ + NL + E+ +H DSL +
Sbjct: 21 LQRLGLSGELEAAFLRYRQELLEWNTRFNLTAIKDPEEVMTKHFLDSLSLLAIYPQDEAT 80
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFPG+ + V L+E+ NKK +FLR++V +V R
Sbjct: 81 TLLDIGTGPGFPGLPLKMARPRWR---VTLVEATNKKVTFLRHMVDVLELEHVEVIHGRA 137
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+E Q + D+++ARA+A L LLEY P+
Sbjct: 138 EELGQKAAYRSAFDLVTARAVAALPALLEYCAPY 171
>gi|326202764|ref|ZP_08192631.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
gi|325986841|gb|EGD47670.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
Length = 241
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 12 ANYLLNTY-----NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
L+ +S +E+ E + L +W+KKINL + + I+H DS+ +
Sbjct: 8 KELLIKGLTHYKKEISDTQIEQFEKYMELLKEWNKKINLTAIEDDREIVIKHFIDSISIV 67
Query: 67 QLH-PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G GFPGI I + L++ ++ + K + + V T
Sbjct: 68 PHIGNEDIKIIDVGTGAGFPGIPLKIVNPKNKITLLDSLDKRVKFLNEVINKVNITQISA 127
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ P D+ ARA+++L LLEY P++
Sbjct: 128 --IHGRAEDFGTNPVYREKYDIAVARAVSNLPVLLEYCLPFIK 168
>gi|76787171|ref|YP_330246.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae A909]
gi|123601392|sp|Q3JZQ7|RSMG_STRA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76562228|gb|ABA44812.1| glucose-inhibited division protein B [Streptococcus agalactiae
A909]
Length = 237
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHP 70
+ + ++ + ++ E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 10 LIEHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDN 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
P +D+G+G GFP I I I+ + +I+S NK+ +FL + + F
Sbjct: 70 SPLSILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFGQDRVFRAKFDIVTARAVARMQVLAELTIPFLK 165
>gi|22537769|ref|NP_688620.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae 2603V/R]
gi|76799422|ref|ZP_00781572.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
gi|29336666|sp|Q8DY64|RSMG_STRA5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22534661|gb|AAN00493.1|AE014266_4 glucose-inhibited division protein B [Streptococcus agalactiae
2603V/R]
gi|76585231|gb|EAO61839.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
Length = 237
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHP 70
+ + ++ + ++ E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 10 LIEHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDN 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
P +D+G+G GFP I I I+ + +I+S NK+ +FL + + F
Sbjct: 70 SPLSILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFGQDRVFRAKFDIVTARAVAKMQVLAELTIPFLK 165
>gi|254450602|ref|ZP_05064039.1| methyltransferase GidB [Octadecabacter antarcticus 238]
gi|198265008|gb|EDY89278.1| methyltransferase GidB [Octadecabacter antarcticus 238]
Length = 202
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DL 78
+VSRET++KLE L KW+K INL++ ++V D W RH+ DS +VF P DL
Sbjct: 8 DVSRETMDKLEQLCALITKWTKAINLIAPNSVPDLWDRHIVDSAQVFHCAPDDWTCWTDL 67
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGG P ++ +I LIES +K FL+ ++ K+ RI +A
Sbjct: 68 GSGGGLPALVVAILDQQKRPM--TLIESDQRKCLFLKTARRELGLDIKIVNKRITDAD-- 123
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV+SARALA L LL Y+ +L +
Sbjct: 124 VAKADVLSARALAPLSDLLGYAEKFLRPE 152
>gi|313124635|ref|YP_004034894.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312281198|gb|ADQ61917.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 239
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L A L + +S ++ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPELFAETLSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L P D+G+G GFP + I +E V +++S K+ +FL +++K
Sbjct: 61 PLLLWPEVFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEK 117
Query: 121 TAAR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P D+++ARA+A + L EY P
Sbjct: 118 LGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAK 166
>gi|116514833|ref|YP_813739.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274435|sp|Q047S1|RSMG_LACDB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116094148|gb|ABJ59301.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325126527|gb|ADY85857.1| Glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 239
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L A L + +S ++ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPELFAETLSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L P D+G+G GFP + I +E V +++S K+ +FL +++K
Sbjct: 61 PLLLWPEVFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEK 117
Query: 121 TAAR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P D+++ARA+A + L EY P
Sbjct: 118 LGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAK 166
>gi|104774705|ref|YP_619685.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|123251759|sp|Q1G8A5|RSMG_LACDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|103423786|emb|CAI98794.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 239
Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L A L + +S ++ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPELFAETLSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L P D+G+G GFP + I +E V +++S K+ +FL +++K
Sbjct: 61 PLLLWPEVFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEK 117
Query: 121 TAAR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P D+++ARA+A + L EY P
Sbjct: 118 LGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAK 166
>gi|326692159|ref|ZP_08229164.1| 16S rRNA methyltransferase GidB [Leuconostoc argentinum KCTC 3773]
Length = 239
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++ +++ E ++ + + + +NL + + +D +++H DSL V Q
Sbjct: 14 GIQLTENQIQQFEQYFDMLVATNAHVNLTAITEKKDVYLKHFYDSLTVAQYEKDLQQTNG 73
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRI 132
ID+G+G GFP + I +++ + ++++ K+ FL+ VV + R
Sbjct: 74 TLIDVGTGAGFPSLPLKIAFPNLQ---ITMVDALQKRVKFLQDVVTTLGITGVTIVHGRA 130
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ P+ D +ARA+A L EY+ P++
Sbjct: 131 EDIGQDPKYREQFDYATARAVARTSVLAEYTLPFVK 166
>gi|312866384|ref|ZP_07726602.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
gi|311098078|gb|EFQ56304.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
Length = 237
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+ +S + + E ++ L + W++KINL + + ++ +++H DS+ +
Sbjct: 10 LAQEGFELSDKQKQDFESYFRLLVDWNQKINLTAITDKDEVYLKHFYDSVAPVLQGLISN 69
Query: 74 IWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
I D+G+G GFP + I +E V +I+S K+ +FL V ++ +
Sbjct: 70 NTIKLLDIGAGAGFPSLPMKILCPQLE---VTIIDSLKKRINFLEQVAKELGMTGVHFYH 126
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDLGQDKAFRANYDLVTARAVARMQVLSELTIPFLK 165
>gi|326793314|ref|YP_004311135.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
gi|326544078|gb|ADZ85937.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
Length = 238
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-- 63
+L N++ L + + L +W++K+NL + + + +H D +
Sbjct: 1 MKQLLLDGAKELGINLTETQLNQFMMYKSLLQEWNEKMNLTAITEDREVMTKHFLDCMTI 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPG++ I +E + L+++ K+ +FL V+ +
Sbjct: 61 QKAIDMNTQKTVIDIGTGAGFPGLVIKIAFPHLE---LTLVDALKKRLTFLEEVINQLGL 117
Query: 124 RG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+G K R ++ D+ ++RA+A+L L EY+ P++
Sbjct: 118 KGIKCIHSRAEDLGKNKAYREGFDICASRAVANLAVLSEYTLPFVK 163
>gi|240138142|ref|YP_002962614.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Methylobacterium extorquens AM1]
gi|240008111|gb|ACS39337.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Methylobacterium extorquens AM1]
Length = 234
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 84/150 (56%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L+ ++VSRET L+ + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 32 VLSEHHVSRETAASLDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLSIAPEATR 91
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W+DLGSG G PG+I ++ G V L+ES +K +FL + T A V RI+
Sbjct: 92 WLDLGSGAGIPGLILALAGKERPGFHVRLVESNARKCAFLSETARLTGAPVTVHNARIEA 151
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+T +++ ARALA L LL ++ P L
Sbjct: 152 VIGTLTDTEIVCARALAPLSQLLAWTEPLL 181
>gi|218529838|ref|YP_002420654.1| methyltransferase GidB [Methylobacterium chloromethanicum CM4]
gi|254766897|sp|B7KV55|RSMG_METC4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218522141|gb|ACK82726.1| methyltransferase GidB [Methylobacterium chloromethanicum CM4]
Length = 211
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 84/150 (56%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L+ ++VSRET L+ + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 9 VLSEHHVSRETAASLDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLSIAPEATR 68
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W+DLGSG G PG+I ++ G V L+ES +K +FL + T A V RI+
Sbjct: 69 WLDLGSGAGIPGLILALAGKERPGFHVRLVESNARKCAFLSETARLTGAPVTVHNARIEA 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+T +++ ARALA L LL ++ P L
Sbjct: 129 VIGTLTDTEIVCARALAPLSQLLAWTEPLL 158
>gi|24115043|ref|NP_709553.1| 16S rRNA methyltransferase GidB [Shigella flexneri 2a str. 301]
gi|32699527|sp|Q83PJ7|RSMG_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24054303|gb|AAN45260.1| glucose-inhibited division protein GidB [Shigella flexneri 2a str.
301]
Length = 207
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+GSG G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGSGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|307709239|ref|ZP_07645697.1| methyltransferase GidB [Streptococcus mitis SK564]
gi|307619822|gb|EFN98940.1| methyltransferase GidB [Streptococcus mitis SK564]
Length = 237
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +S + ++ E ++ L ++W+ KINL + + E+ +++H DS+ + I
Sbjct: 13 HNLPLSDQQKKQFERYFELLVEWNGKINLTAITDKEEVYLKHFYDSIAPILQGLISNETI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRI 132
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|311281695|ref|YP_003943926.1| methyltransferase GidB [Enterobacter cloacae SCF1]
gi|308750890|gb|ADO50642.1| methyltransferase GidB [Enterobacter cloacae SCF1]
Length = 207
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + IRH+ DS+ V H +ID
Sbjct: 13 GISLTDHQKNQLVAYVDMLNKWNKAYNLTSVRDPNEMLIRHILDSI-VVAPHLQGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+G G PGI S+ L++S K+ FLR V + R+++ P
Sbjct: 72 VGTGPGLPGIPLSVVRPE---AHFTLLDSLGKRVRFLRQVQHELKLENVTPVQSRVEDFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 AQP-PFDGVISRAFASLNDMVSWCHHL 154
>gi|114769775|ref|ZP_01447385.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [alpha proteobacterium
HTCC2255]
gi|114549480|gb|EAU52362.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [alpha proteobacterium
HTCC2255]
Length = 213
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 4/150 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDL 78
+VSRET++ L + L KW+K INLVS ST+ W RH DS +++ P + +D+
Sbjct: 15 DVSRETIQSLRVYANLLEKWNKTINLVSKSTINHMWERHFLDSAQLWPHIPENAKTLVDI 74
Query: 79 GSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSG GF G++ +I V LIES +K +F+R V ++T ++ RI+E
Sbjct: 75 GSGAGFAGLVLAIIGKEKNPNLRVVLIESDTRKCAFMRNVSRETNINVEIITKRIEEVDD 134
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV++ARALA + LL+YS L +K
Sbjct: 135 L--KADVVTARALATVSQLLDYSKNILKKK 162
>gi|25011716|ref|NP_736111.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae NEM316]
gi|77408471|ref|ZP_00785209.1| methyltransferase GidB [Streptococcus agalactiae COH1]
gi|77411914|ref|ZP_00788245.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77414723|ref|ZP_00790853.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|29336669|sp|Q8E3T0|RSMG_STRA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24413256|emb|CAD47335.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159230|gb|EAO70411.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|77162011|gb|EAO72991.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77172913|gb|EAO76044.1| methyltransferase GidB [Streptococcus agalactiae COH1]
Length = 237
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHP 70
+ + ++ + ++ E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 10 LIEHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDN 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
P +D+G+G GFP I I I+ + +I+S NK+ +FL + + F
Sbjct: 70 SPLSILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFGQDKVFRAKFDIVTARAVARMQVLAELTIPFLK 165
>gi|194467503|ref|ZP_03073490.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
gi|194454539|gb|EDX43436.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
Length = 241
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + +S E +++ +Y L ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPEQFQQALADHGIALSAEQMQQFADYYRLLVETNEHVNLTRITEKDEVYLKHFYDSIM 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP + I ++ V +++S NK+ +FL +V K
Sbjct: 61 GAFAEPRLESEELTLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRIAFLEDLVAK 117
Query: 121 TAA-RGKVFACRIQ----EAPQMITTCDVISARALADLDTLLEYSFP 162
+ R + + D+++ARA+A L L E P
Sbjct: 118 LGLTDVTLIHDRAETFSAKNSPYREKFDIVTARAVARLSVLSELCLP 164
>gi|87122926|ref|ZP_01078791.1| glucose-inhibited division protein B [Marinomonas sp. MED121]
gi|86161799|gb|EAQ63099.1| glucose-inhibited division protein B [Marinomonas sp. MED121]
Length = 210
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 4/156 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I++ ++ T++KL + L KW+K NL + V+ H+ DSL
Sbjct: 5 EIIQKGAQTMGVDLPELTIQKLVDYLALLQKWNKAYNLTAIRDVDQMIALHLIDSLSTIP 64
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
ID+G+G G PG++ +I L++S KK FL V +
Sbjct: 65 YIQ-GDKIIDVGTGPGLPGMVLAICFPEK---AFTLLDSNGKKTRFLTQVKMELGVDNVT 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A E D + +RA A L ++ ++ P
Sbjct: 121 VANERVELHAQAGQYDHVISRAFASLQDMINWTLPL 156
>gi|241759058|ref|ZP_04757169.1| 16S rRNA methyltransferase GidB [Neisseria flavescens SK114]
gi|241320660|gb|EER56913.1| 16S rRNA methyltransferase GidB [Neisseria flavescens SK114]
Length = 209
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ KL + L KW+K NL + H+ DSL +
Sbjct: 7 LRDGIQALGLDIDDAKQAKLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ +D+GSGGG PGI T+I ++ + L+++ KK +FL+ V + +V
Sbjct: 67 KHAQTMLDVGSGGGQPGIPTAICRPDLD---ITLLDANTKKTAFLQQAVIELGLKNVRVI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ A DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAAADCR--ADVITSRAFAELADFVNWTEHLLKD 159
>gi|251781805|ref|YP_002996107.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390434|dbj|BAH80893.1| glucose-inhibited division protein B [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|323126617|gb|ADX23914.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 237
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ + ++ + E+ + ++ L ++W+ KINL + + D +++H DS+ + I
Sbjct: 13 DGFPLTMKQKEQFDTYFKLLVEWNNKINLTAITEENDVYLKHFYDSIAPILQGFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++E V +I+S NK+ +FL ++ + A + F R
Sbjct: 73 RLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRIAFLTHLAESLALDKVHFFHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKDFRAQFDVVTARAVARMQVLAELTIPFLK 165
>gi|225028846|ref|ZP_03718038.1| hypothetical protein EUBHAL_03133 [Eubacterium hallii DSM 3353]
gi|224953842|gb|EEG35051.1| hypothetical protein EUBHAL_03133 [Eubacterium hallii DSM 3353]
Length = 238
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D L+A +++ + L + E FY + ++ +K +NL + + ++ +H DSL
Sbjct: 1 MDFKEKLKARAEKEGISLTPKQLGQFELFYKMLIETNKSMNLTAITDEDEVIEKHFIDSL 60
Query: 64 RVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ ID+G+G GFPGI I I+ L++S NK+ FL+ V +
Sbjct: 61 SCRRVVDMSQIRTCIDVGTGAGFPGIPLKIVYPEID---FVLVDSLNKRVKFLKDVKEAL 117
Query: 122 AARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
G + R ++ + D+ +RA+A+L L EY P++
Sbjct: 118 GLEGLEALHGRAEDLARDKSLRAAFDLCVSRAVANLSVLSEYCVPFVR 165
>gi|56694930|ref|YP_165275.1| glucose-inhibited division protein B [Ruegeria pomeroyi DSS-3]
gi|81558750|sp|Q5LWF2|RSMG_SILPO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56676667|gb|AAV93333.1| glucose-inhibited division protein B [Ruegeria pomeroyi DSS-3]
Length = 204
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 62/150 (41%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
NT NVSRET E+L+ F L KW+ +INLVS ++ED W RH+ DS++VF+ P +W+
Sbjct: 7 NTLNVSRETFERLKIFADLVHKWNPRINLVSKRSLEDLWTRHIIDSIQVFRNAPKGDLWV 66
Query: 77 DLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+I +I + + +ES +K++FLR ++ +V + RI+
Sbjct: 67 DLGSGGGFPGLICAILAAEEKPETQFICVESDQRKSAFLRSAARECGIACQVISERIEHL 126
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D++SARAL DL LL ++ L
Sbjct: 127 DPL--DADILSARALTDLTGLLGFAERHLK 154
>gi|227543811|ref|ZP_03973860.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|300908879|ref|ZP_07126342.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri SD2112]
gi|227186188|gb|EEI66259.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|300894286|gb|EFK87644.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri SD2112]
Length = 241
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + +S E +++ +Y L ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPEQFQQALADHGITLSAEQMQQFADYYQLLVETNEHVNLTRITEKDEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP + I ++ V +++S NK+ +FL +V K
Sbjct: 61 GAFAEPRLESEELTLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRIAFLEALVAK 117
Query: 121 TAA-RGKVFACRIQ----EAPQMITTCDVISARALADLDTLLEYSFP 162
+ R + + D+++ARA+A L L E P
Sbjct: 118 LGLTDVTLIHDRAETFSAKNSPYREKFDIVTARAVARLSVLSELCLP 164
>gi|300215180|gb|ADJ79596.1| Ribosomal RNA small subunit methyltransferase G (16S ribosomal RNA
7-methylguanosine methyltransferase) (16S ribosomal RNA
m7G methyltransferase) [Lactobacillus salivarius CECT
5713]
Length = 241
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SL 63
R + N++ E +++ E +Y ++ +K +NL + + + +++H D +L
Sbjct: 4 EEFRQSLAEQGLNLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLAL 63
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V L D+G+G GFP + I ++ + +++S NK+ FL+ + QK
Sbjct: 64 TVKNLQTEELSLCDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKLNL 120
Query: 124 -RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPWLY 165
R +E D+++ARA+A + L E P
Sbjct: 121 QDVHFHHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAK 167
>gi|301301113|ref|ZP_07207270.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851242|gb|EFK78969.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 241
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SL 63
R + N++ E +++ E +Y ++ +K +NL + + + +++H D +L
Sbjct: 4 EEFRQSLAEQGLNLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLAL 63
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V L D+G+G GFP + I ++ + +++S NK+ FL+ + QK
Sbjct: 64 TVKDLQTEELSLCDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKLNL 120
Query: 124 -RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPWLY 165
R +E D+++ARA+A + L E P
Sbjct: 121 QDVHFHHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAK 167
>gi|154251728|ref|YP_001412552.1| methyltransferase GidB [Parvibaculum lavamentivorans DS-1]
gi|189045873|sp|A7HSL2|RSMG_PARL1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154155678|gb|ABS62895.1| methyltransferase GidB [Parvibaculum lavamentivorans DS-1]
Length = 226
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
++ + NVSRETL++L + L KW K INLVS+ ++ + W RH+ DS ++
Sbjct: 12 VVDSESFSALTNVSRETLDRLLSYEALLRKWQKSINLVSNGSLPELWRRHMLDSAQLVCL 71
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ WIDLGSGGGFPG++ +I L G ++L+ES +K F+R V + T A V
Sbjct: 72 VPESARRWIDLGSGGGFPGLVIAILLRERPGFQMHLVESDQRKCVFMREVARVTGAPATV 131
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
RI+ Q DV+SARALA LD L ++ P
Sbjct: 132 HTVRIEAFAQGAEAGDVVSARALAPLDRLFGWAAPL 167
>gi|323467284|gb|ADX70971.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
gi|323467327|gb|ADX71014.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
Length = 240
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + E+ + ++ ++ ++ +NL + + +++H DS+
Sbjct: 1 MNPEKFILELSKHNFVLTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ D+G+G GFP I I S++ V +++S K+ +FL+ ++ K
Sbjct: 61 PLFVFGDVFKDGATLCDVGAGAGFPSIPLKILKPSLK---VTIVDSLAKRLTFLKDLIAK 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 118 LGLDNVELVHGRAEDVGQNKLYREKFDIVTARAIAKMSVLSEYCLPLVKK 167
>gi|317494635|ref|ZP_07953047.1| glucose inhibited division protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917237|gb|EFV38584.1| glucose inhibited division protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 206
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 4/162 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L +++ + ++L + L KW+K NL S ++ +RH+ DS+ V
Sbjct: 1 MQKQLDTLLAQAGISLTDQQKQQLLGYVGLLDKWNKAYNLTSVRDPKEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPFLQGNRFIDVGTGPGLPGIPLAIVRPE---SHFTLLDSLGKRVRFLRQVQHELKLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA D + +RA A L +L + +
Sbjct: 117 IEPVQSRVEAFLPEPPFDGVISRAFASLQDMLSWCHHLPKPE 158
>gi|322376832|ref|ZP_08051325.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
gi|321282639|gb|EFX59646.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
Length = 237
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + ++ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLPLSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DLAQDKNFRAHYDFVTARAVARMQVLSELTIPYLK 165
>gi|320174631|gb|EFW49767.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Shigella dysenteriae CDC 74-1112]
Length = 207
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|293393680|ref|ZP_06637989.1| glucose inhibited division protein B [Serratia odorifera DSM 4582]
gi|291423802|gb|EFE97022.1| glucose inhibited division protein B [Serratia odorifera DSM 4582]
Length = 206
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + ++ ++L + + KW+K NL S + IRH+ DS+ V
Sbjct: 1 MDKKLDSLLAAAGISLPDRQKQQLLGYVGMLDKWNKAYNLTSVRDPQQMLIRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLAGMRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELGLNN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA D + +RA A L +L + +
Sbjct: 117 IEPVQSRVEAFVAEPPFDGVISRAFASLQDMLAWCHHLPAK 157
>gi|206578596|ref|YP_002241279.1| methyltransferase GidB [Klebsiella pneumoniae 342]
gi|288937918|ref|YP_003441977.1| methyltransferase GidB [Klebsiella variicola At-22]
gi|290511658|ref|ZP_06551026.1| 16S rRNA methyltransferase GidB [Klebsiella sp. 1_1_55]
gi|226797826|sp|B5XZL6|RSMG_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|206567654|gb|ACI09430.1| methyltransferase GidB [Klebsiella pneumoniae 342]
gi|288892627|gb|ADC60945.1| methyltransferase GidB [Klebsiella variicola At-22]
gi|289775448|gb|EFD83448.1| 16S rRNA methyltransferase GidB [Klebsiella sp. 1_1_55]
Length = 207
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL+ +++ +L + L KW+K NL S + +RH+ DS+ +
Sbjct: 1 MLNKLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSI-I 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VAPYLQGSRFIDVGTGPGLPGIPLAIVRPE---SHFTLLDSLGKRVRFLRQVQHELKLDN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L+ ++ +
Sbjct: 117 VTPVQSRVEAFPAEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|238797881|ref|ZP_04641373.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
mollaretii ATCC 43969]
gi|238718297|gb|EEQ10121.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
mollaretii ATCC 43969]
Length = 206
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ N LLN + + +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLKKLNSLLNAADIELPEQQKLQLIAYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNTHLQGRRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELGLSN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R+++ D + +RA A L +L + +
Sbjct: 117 IEPVQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|324990717|gb|EGC22653.1| glucose inhibited division protein B [Streptococcus sanguinis
SK353]
Length = 237
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L ++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 12 LQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIGNQE 71
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 72 LKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGR 128
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 129 AEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|94993669|ref|YP_601767.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10750]
gi|166224621|sp|Q1J8D8|RSMG_STRPF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94547177|gb|ABF37223.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10750]
Length = 237
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ ++++ + E+ + ++ L ++W+ KINL + + + +++H DS+ + I
Sbjct: 13 DGFSLASKQKEQFDTYFKLLVEWNTKINLTAITEKNEVYLKHFYDSIAPILQGFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|148543343|ref|YP_001270713.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri DSM 20016]
gi|184152753|ref|YP_001841094.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri JCM 1112]
gi|227364417|ref|ZP_03848507.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|325683616|ref|ZP_08163132.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
gi|166989746|sp|A5VHQ2|RSMG_LACRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797827|sp|B2G582|RSMG_LACRJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148530377|gb|ABQ82376.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus reuteri DSM
20016]
gi|183224097|dbj|BAG24614.1| glucose-inhibited division protein B [Lactobacillus reuteri JCM
1112]
gi|227070510|gb|EEI08843.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|324977966|gb|EGC14917.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
Length = 241
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + +S E +++ +Y L ++ ++ +NL + + +++H DS+
Sbjct: 1 MNPEQFQQALADHGITLSAEQMQQFADYYQLLVETNEHVNLTRITEKNEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP + I ++ V +++S NK+ +FL +V K
Sbjct: 61 GAFAEPRLESEDLTLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRIAFLEDLVAK 117
Query: 121 TAAR-GKVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFP 162
+ R + D+++ARA+A L L E P
Sbjct: 118 LGLTGVTLIHDRAETFSAKTSPYREKFDIVTARAVARLSVLSELCLP 164
>gi|116630298|ref|YP_815530.1| glucose-inhibited division protein B [Lactobacillus gasseri ATCC
33323]
gi|282852937|ref|ZP_06262278.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
gi|122272765|sp|Q040U0|RSMG_LACGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116095880|gb|ABJ61032.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus gasseri ATCC
33323]
gi|282556045|gb|EFB61666.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
Length = 239
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N I + + +S + E+ +Y ++++KK+NL + + +++H DS+
Sbjct: 1 MNPEIFAEELANHGFKLSNKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP + I + + +++S K+ FL ++
Sbjct: 61 PLLEFSDLFKGEKSLCDVGAGAGFPSLPIKILCPDL---SITIVDSLGKRLKFLDELIND 117
Query: 121 TAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + R ++A + D+++ RA+A + L EY P
Sbjct: 118 LSLDKVTLVHSRAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCIPLAK 166
>gi|227529772|ref|ZP_03959821.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
gi|227350256|gb|EEJ40547.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
Length = 253
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + N+S +++ +Y L + ++ +NL + ++ +++H DS+
Sbjct: 13 MNPEQFQQALAERGINLSDAQMKQFAEYYDLLVATNEHVNLTRITEKKEVYLKHFFDSIS 72
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP I I ++ V +++S NK+ FL+ +V +
Sbjct: 73 GVFAEPKLMTDELTLCDIGAGAGFPSIPIKIAFPQLK---VTIVDSLNKRIIFLQELVDQ 129
Query: 121 TAA-RGKVFACRIQ----EAPQMITTCDVISARALADLDTLLEYSFP 162
+ R + + D+++ARA+A L L E P
Sbjct: 130 LGLSDVTLVHDRAETFSAKRSDHREQYDIVTARAVARLAVLSELCLP 176
>gi|304398009|ref|ZP_07379884.1| methyltransferase GidB [Pantoea sp. aB]
gi|304354295|gb|EFM18667.1| methyltransferase GidB [Pantoea sp. aB]
Length = 205
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + ++S + ++L + L KW+K NL S E +RH+ DS+ V H
Sbjct: 5 LTSLLKAASISLSDQQKQQLVAYVGLLDKWNKAYNLTSVRDPEQMLVRHILDSI-VVAPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I + L++S K+ FLR V +
Sbjct: 64 LKGSRFIDVGTGPGLPGIPLAIVMPD---AHFTLLDSLGKRVRFLRQVQHELGLTNITPV 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L ++ +
Sbjct: 121 QSRVEAFPAEPPFDGVISRAFASLTDMVNWCHHL 154
>gi|99082706|ref|YP_614860.1| methyltransferase GidB [Ruegeria sp. TM1040]
gi|123252057|sp|Q1GCL8|RSMG_SILST RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|99038986|gb|ABF65598.1| methyltransferase GidB [Ruegeria sp. TM1040]
Length = 205
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 65/150 (43%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+VSRETLE+L F + KW+ KINLVS +++D W RH+ DS++VF P W+D
Sbjct: 9 ELDVSRETLERLMVFSEVLKKWNPKINLVSRKSIDDLWTRHILDSIQVFDAAPEGGAWLD 68
Query: 78 LGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
+GSGGG PGII +I + + L+ES +K +FLR ++ V + RI+ AP
Sbjct: 69 IGSGGGLPGIIVAILAAEKSPDTRITLMESDLRKCAFLRNAARECGVSVTVKSKRIESAP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ CDV+SARALADLD LL ++ L +
Sbjct: 129 E--ENCDVLSARALADLDNLLGFAERHLAE 156
>gi|116493452|ref|YP_805187.1| cell division SAM-dependent methyltransferase [Pediococcus
pentosaceus ATCC 25745]
gi|122265084|sp|Q03DH7|RSMG_PEDPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103602|gb|ABJ68745.1| 16S rRNA m(7)G-527 methyltransferase [Pediococcus pentosaceus ATCC
25745]
Length = 243
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-- 65
+ Y +S + + +Y + ++ ++ +NL + + + +++H DS+
Sbjct: 4 EEFKKALEDKGYQISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDSVTPLL 63
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + D+G+G GFP + I S++ V +++S NK+ +FL+ +V +
Sbjct: 64 EAPEYFKSGAELCDVGAGAGFPSLPMKILFPSLK---VTIVDSLNKRITFLKTLVDQLEL 120
Query: 124 -RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + ++++ARA+A L L E P + Q
Sbjct: 121 TDVTLVHDRAETFGAKKSVYREKFEIVTARAVARLSVLSELCIPLVKQ 168
>gi|15804340|ref|NP_290379.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 EDL933]
gi|15833936|ref|NP_312709.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
Sakai]
gi|16131608|ref|NP_418196.1| 16S rRNA m(7)G527 methyltransferase, SAM-dependent;
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. MG1655]
gi|26250486|ref|NP_756526.1| 16S rRNA methyltransferase GidB [Escherichia coli CFT073]
gi|30064955|ref|NP_839126.1| 16S rRNA methyltransferase GidB [Shigella flexneri 2a str. 2457T]
gi|74314234|ref|YP_312653.1| 16S rRNA methyltransferase GidB [Shigella sonnei Ss046]
gi|82546100|ref|YP_410047.1| 16S rRNA methyltransferase GidB [Shigella boydii Sb227]
gi|89110267|ref|AP_004047.1| methyltransferase, glucose-inhibited cell-division protein
[Escherichia coli str. K-12 substr. W3110]
gi|91213267|ref|YP_543253.1| 16S rRNA methyltransferase GidB [Escherichia coli UTI89]
gi|110644081|ref|YP_671811.1| 16S rRNA methyltransferase GidB [Escherichia coli 536]
gi|110807564|ref|YP_691084.1| 16S rRNA methyltransferase GidB [Shigella flexneri 5 str. 8401]
gi|117626011|ref|YP_859334.1| glucose-inhibited division protein B [Escherichia coli APEC O1]
gi|157163222|ref|YP_001460540.1| 16S rRNA methyltransferase GidB [Escherichia coli HS]
gi|168748530|ref|ZP_02773552.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4113]
gi|168753642|ref|ZP_02778649.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4401]
gi|168766240|ref|ZP_02791247.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4486]
gi|168772211|ref|ZP_02797218.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4196]
gi|168779975|ref|ZP_02804982.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4076]
gi|168786583|ref|ZP_02811590.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC869]
gi|170022223|ref|YP_001727177.1| 16S rRNA methyltransferase GidB [Escherichia coli ATCC 8739]
gi|170083241|ref|YP_001732561.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187732172|ref|YP_001882423.1| 16S rRNA methyltransferase GidB [Shigella boydii CDC 3083-94]
gi|188493070|ref|ZP_03000340.1| methyltransferase GidB [Escherichia coli 53638]
gi|191169754|ref|ZP_03031413.1| 16S rRNA methyltransferase GidB [Escherichia coli B7A]
gi|191170432|ref|ZP_03031985.1| 16S rRNA methyltransferase GidB [Escherichia coli F11]
gi|193063828|ref|ZP_03044915.1| 16S rRNA methyltransferase GidB [Escherichia coli E22]
gi|193071606|ref|ZP_03052512.1| 16S rRNA methyltransferase GidB [Escherichia coli E110019]
gi|194428104|ref|ZP_03060648.1| 16S rRNA methyltransferase GidB [Escherichia coli B171]
gi|194435612|ref|ZP_03067715.1| 16S rRNA methyltransferase GidB [Escherichia coli 101-1]
gi|195936367|ref|ZP_03081749.1| glucose-inhibited division protein B [Escherichia coli O157:H7 str.
EC4024]
gi|208808840|ref|ZP_03251177.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4206]
gi|208812418|ref|ZP_03253747.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4045]
gi|208818673|ref|ZP_03258993.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4042]
gi|209399374|ref|YP_002273268.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4115]
gi|209921221|ref|YP_002295305.1| 16S rRNA methyltransferase GidB [Escherichia coli SE11]
gi|215489078|ref|YP_002331509.1| 16S rRNA methyltransferase GidB [Escherichia coli O127:H6 str.
E2348/69]
gi|217324250|ref|ZP_03440334.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
TW14588]
gi|218556311|ref|YP_002389225.1| 16S rRNA methyltransferase GidB [Escherichia coli IAI1]
gi|218560815|ref|YP_002393728.1| 16S rRNA methyltransferase GidB [Escherichia coli S88]
gi|218692028|ref|YP_002400240.1| 16S rRNA methyltransferase GidB [Escherichia coli ED1a]
gi|218697466|ref|YP_002405133.1| 16S rRNA methyltransferase GidB [Escherichia coli 55989]
gi|227883962|ref|ZP_04001767.1| glucose-inhibited division protein B [Escherichia coli 83972]
gi|237703541|ref|ZP_04534022.1| ribosomal RNA small subunit methyltransferase G [Escherichia sp.
3_2_53FAA]
gi|238902831|ref|YP_002928627.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli BW2952]
gi|253775625|ref|YP_003038456.1| 16S rRNA methyltransferase GidB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254038959|ref|ZP_04873011.1| methyltransferase gidB [Escherichia sp. 1_1_43]
gi|254795746|ref|YP_003080583.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
TW14359]
gi|256021238|ref|ZP_05435103.1| 16S rRNA methyltransferase GidB [Shigella sp. D9]
gi|256025529|ref|ZP_05439394.1| 16S rRNA methyltransferase GidB [Escherichia sp. 4_1_40B]
gi|260846475|ref|YP_003224253.1| methyltransferase GidB [Escherichia coli O103:H2 str. 12009]
gi|260857845|ref|YP_003231736.1| methyltransferase GidB [Escherichia coli O26:H11 str. 11368]
gi|260870474|ref|YP_003236876.1| methyltransferase GidB [Escherichia coli O111:H- str. 11128]
gi|261225897|ref|ZP_05940178.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli O157:H7 str. FRIK2000]
gi|261258942|ref|ZP_05951475.1| methyltransferase GidB [Escherichia coli O157:H7 str. FRIK966]
gi|293417213|ref|ZP_06659840.1| 16S rRNA methyltransferase GidB [Escherichia coli B185]
gi|293464066|ref|ZP_06664480.1| 16S rRNA methyltransferase GidB [Escherichia coli B088]
gi|297519013|ref|ZP_06937399.1| 16S rRNA methyltransferase GidB [Escherichia coli OP50]
gi|300815005|ref|ZP_07095230.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 107-1]
gi|300824550|ref|ZP_07104660.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 119-7]
gi|300902978|ref|ZP_07120921.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 84-1]
gi|300916391|ref|ZP_07133131.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 115-1]
gi|300932375|ref|ZP_07147640.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 187-1]
gi|300950657|ref|ZP_07164551.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 116-1]
gi|300958748|ref|ZP_07170865.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 175-1]
gi|300984346|ref|ZP_07176952.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 45-1]
gi|301019836|ref|ZP_07183977.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 196-1]
gi|301047563|ref|ZP_07194635.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 185-1]
gi|301305611|ref|ZP_07211701.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 124-1]
gi|301644416|ref|ZP_07244415.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 146-1]
gi|306815908|ref|ZP_07450046.1| 16S rRNA methyltransferase GidB [Escherichia coli NC101]
gi|307140440|ref|ZP_07499796.1| 16S rRNA methyltransferase GidB [Escherichia coli H736]
gi|307313188|ref|ZP_07592813.1| methyltransferase GidB [Escherichia coli W]
gi|309795703|ref|ZP_07690118.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 145-7]
gi|312967850|ref|ZP_07782062.1| methyltransferase GidB [Escherichia coli 2362-75]
gi|312971968|ref|ZP_07786142.1| methyltransferase GidB [Escherichia coli 1827-70]
gi|331644467|ref|ZP_08345596.1| 16S rRNA methyltransferase GidB [Escherichia coli H736]
gi|331649566|ref|ZP_08350652.1| 16S rRNA methyltransferase GidB [Escherichia coli M605]
gi|331655402|ref|ZP_08356401.1| 16S rRNA methyltransferase GidB [Escherichia coli M718]
gi|331660084|ref|ZP_08361022.1| 16S rRNA methyltransferase GidB [Escherichia coli TA206]
gi|331670591|ref|ZP_08371430.1| 16S rRNA methyltransferase GidB [Escherichia coli TA271]
gi|331679844|ref|ZP_08380514.1| 16S rRNA methyltransferase GidB [Escherichia coli H591]
gi|332282465|ref|ZP_08394878.1| ribosomal RNA small subunit methyltransferase G [Shigella sp. D9]
gi|62288117|sp|P0A6U5|RSMG_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|62288118|sp|P0A6U6|RSMG_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|62288119|sp|P0A6U7|RSMG_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122421809|sp|Q1R4J2|RSMG_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122957079|sp|Q0SYT6|RSMG_SHIF8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123147503|sp|Q0TAW9|RSMG_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123558240|sp|Q31UN9|RSMG_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123615765|sp|Q3YVP4|RSMG_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224586|sp|A1AHS0|RSMG_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166989744|sp|A8A6K3|RSMG_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039386|sp|B1IWZ8|RSMG_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725354|sp|B7MGG0|RSMG_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725356|sp|B7M596|RSMG_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797824|sp|B5YXE4|RSMG_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797825|sp|B6I3X7|RSMG_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229558760|sp|B1X9W8|RSMG_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691694|sp|B2TUN5|RSMG_SHIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766890|sp|B7UMK5|RSMG_ECO27 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766891|sp|B7L890|RSMG_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766892|sp|B7N2H9|RSMG_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|259495493|sp|C4ZZ18|RSMG_ECOBW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21465733|pdb|1JSX|A Chain A, Crystal Structure Of The Escherichia Coli
Glucose-Inhibited Division Protein B (Gidb)
gi|12518597|gb|AAG58943.1|AE005605_11 glucose-inhibited division; chromosome replication [Escherichia
coli O157:H7 str. EDL933]
gi|26110916|gb|AAN83100.1|AE016769_215 Methyltransferase gidB [Escherichia coli CFT073]
gi|290589|gb|AAA62092.1| glucose inhibited division protein [Escherichia coli]
gi|581247|emb|CAA25774.1| unnamed protein product [Escherichia coli]
gi|1790179|gb|AAC76763.1| 16S rRNA m(7)G527 methyltransferase, SAM-dependent;
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. MG1655]
gi|13364157|dbj|BAB38105.1| glucose-inhibited division protein GidB [Escherichia coli O157:H7
str. Sakai]
gi|30043216|gb|AAP18937.1| glucose-inhibited division protein GidB [Shigella flexneri 2a str.
2457T]
gi|73857711|gb|AAZ90418.1| GldB [Shigella sonnei Ss046]
gi|81247511|gb|ABB68219.1| GidB [Shigella boydii Sb227]
gi|85676298|dbj|BAE77548.1| methyltransferase, glucose-inhibited cell-division protein
[Escherichia coli str. K12 substr. W3110]
gi|91074841|gb|ABE09722.1| putative methyltransferase GidB [Escherichia coli UTI89]
gi|110345673|gb|ABG71910.1| glucose inhibited division protein B [Escherichia coli 536]
gi|110617112|gb|ABF05779.1| glucose-inhibited division [Shigella flexneri 5 str. 8401]
gi|115515135|gb|ABJ03210.1| glucose-inhibited division protein B [Escherichia coli APEC O1]
gi|157068902|gb|ABV08157.1| methyltransferase GidB [Escherichia coli HS]
gi|169757151|gb|ACA79850.1| methyltransferase GidB [Escherichia coli ATCC 8739]
gi|169891076|gb|ACB04783.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187429164|gb|ACD08438.1| methyltransferase GidB [Shigella boydii CDC 3083-94]
gi|187771511|gb|EDU35355.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4196]
gi|188016845|gb|EDU54967.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4113]
gi|188488269|gb|EDU63372.1| methyltransferase GidB [Escherichia coli 53638]
gi|189002346|gb|EDU71332.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4076]
gi|189358956|gb|EDU77375.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4401]
gi|189364706|gb|EDU83125.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4486]
gi|189373248|gb|EDU91664.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC869]
gi|190900205|gb|EDV60095.1| 16S rRNA methyltransferase GidB [Escherichia coli B7A]
gi|190909240|gb|EDV68826.1| 16S rRNA methyltransferase GidB [Escherichia coli F11]
gi|192930543|gb|EDV83150.1| 16S rRNA methyltransferase GidB [Escherichia coli E22]
gi|192955070|gb|EDV85567.1| 16S rRNA methyltransferase GidB [Escherichia coli E110019]
gi|194413862|gb|EDX30140.1| 16S rRNA methyltransferase GidB [Escherichia coli B171]
gi|194425155|gb|EDX41139.1| 16S rRNA methyltransferase GidB [Escherichia coli 101-1]
gi|208728641|gb|EDZ78242.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4206]
gi|208733695|gb|EDZ82382.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4045]
gi|208738796|gb|EDZ86478.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4042]
gi|209160774|gb|ACI38207.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4115]
gi|209753808|gb|ACI75211.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753810|gb|ACI75212.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753812|gb|ACI75213.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753814|gb|ACI75214.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753816|gb|ACI75215.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209914480|dbj|BAG79554.1| glucose inhibited division protein B [Escherichia coli SE11]
gi|215267150|emb|CAS11598.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-divisionprotein [Escherichia coli
O127:H6 str. E2348/69]
gi|217320471|gb|EEC28895.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
TW14588]
gi|218354198|emb|CAV00831.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli 55989]
gi|218363080|emb|CAR00718.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli IAI1]
gi|218367584|emb|CAR05368.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli S88]
gi|218429592|emb|CAR10550.2| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli ED1a]
gi|222035453|emb|CAP78198.1| Methyltransferase gidB [Escherichia coli LF82]
gi|226838924|gb|EEH70951.1| methyltransferase gidB [Escherichia sp. 1_1_43]
gi|226902805|gb|EEH89064.1| ribosomal RNA small subunit methyltransferase G [Escherichia sp.
3_2_53FAA]
gi|227839240|gb|EEJ49706.1| glucose-inhibited division protein B [Escherichia coli 83972]
gi|238861773|gb|ACR63771.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli BW2952]
gi|242379278|emb|CAQ34085.1| 16S rRNA m[7]G527 methyltransferase [Escherichia coli BL21(DE3)]
gi|253326669|gb|ACT31271.1| methyltransferase GidB [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253979749|gb|ACT45419.1| glucose-inhibited division protein [Escherichia coli BL21(DE3)]
gi|254595146|gb|ACT74507.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli O157:H7 str. TW14359]
gi|257756494|dbj|BAI27996.1| methyltransferase GidB [Escherichia coli O26:H11 str. 11368]
gi|257761622|dbj|BAI33119.1| methyltransferase GidB [Escherichia coli O103:H2 str. 12009]
gi|257766830|dbj|BAI38325.1| methyltransferase GidB [Escherichia coli O111:H- str. 11128]
gi|260451403|gb|ACX41825.1| methyltransferase GidB [Escherichia coli DH1]
gi|281180798|dbj|BAI57128.1| glucose inhibited division protein B [Escherichia coli SE15]
gi|281603138|gb|ADA76122.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Shigella flexneri 2002017]
gi|291321698|gb|EFE61134.1| 16S rRNA methyltransferase GidB [Escherichia coli B088]
gi|291431244|gb|EFF04237.1| 16S rRNA methyltransferase GidB [Escherichia coli B185]
gi|294493000|gb|ADE91756.1| methyltransferase GidB [Escherichia coli IHE3034]
gi|299882064|gb|EFI90275.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 196-1]
gi|300300549|gb|EFJ56934.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 185-1]
gi|300314629|gb|EFJ64413.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 175-1]
gi|300404973|gb|EFJ88511.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 84-1]
gi|300408382|gb|EFJ91920.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 45-1]
gi|300416295|gb|EFJ99605.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 115-1]
gi|300450027|gb|EFK13647.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 116-1]
gi|300459880|gb|EFK23373.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 187-1]
gi|300522951|gb|EFK44020.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 119-7]
gi|300531897|gb|EFK52959.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 107-1]
gi|300839119|gb|EFK66879.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 124-1]
gi|301077255|gb|EFK92061.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 146-1]
gi|305850304|gb|EFM50761.1| 16S rRNA methyltransferase GidB [Escherichia coli NC101]
gi|306906871|gb|EFN37380.1| methyltransferase GidB [Escherichia coli W]
gi|307555879|gb|ADN48654.1| methyltransferase GidB [Escherichia coli ABU 83972]
gi|307628814|gb|ADN73118.1| 16S rRNA methyltransferase GidB [Escherichia coli UM146]
gi|308120582|gb|EFO57844.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 145-7]
gi|309704188|emb|CBJ03535.1| glucose inhibited division protein [Escherichia coli ETEC H10407]
gi|310334345|gb|EFQ00550.1| methyltransferase GidB [Escherichia coli 1827-70]
gi|312287411|gb|EFR15319.1| methyltransferase GidB [Escherichia coli 2362-75]
gi|312948306|gb|ADR29133.1| 16S rRNA methyltransferase GidB [Escherichia coli O83:H1 str. NRG
857C]
gi|313647644|gb|EFS12092.1| methyltransferase GidB [Shigella flexneri 2a str. 2457T]
gi|315063050|gb|ADT77377.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli W]
gi|315138325|dbj|BAJ45484.1| 16S rRNA methyltransferase GidB [Escherichia coli DH1]
gi|315254567|gb|EFU34535.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 85-1]
gi|315285543|gb|EFU44985.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 110-3]
gi|315292826|gb|EFU52178.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 153-1]
gi|315296884|gb|EFU56173.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 16-3]
gi|315618552|gb|EFU99138.1| methyltransferase GidB [Escherichia coli 3431]
gi|320186277|gb|EFW61013.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Shigella flexneri CDC 796-83]
gi|320191156|gb|EFW65806.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli O157:H7 str. EC1212]
gi|320193715|gb|EFW68348.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli WV_060327]
gi|320201227|gb|EFW75808.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli EC4100B]
gi|320639468|gb|EFX09083.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
G5101]
gi|320644908|gb|EFX13944.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H- str.
493-89]
gi|320650174|gb|EFX18670.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H- str. H
2687]
gi|320655523|gb|EFX23458.1| 16S rRNA methyltransferase GidB [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661146|gb|EFX28582.1| 16S rRNA methyltransferase GidB [Escherichia coli O55:H7 str. USDA
5905]
gi|320666275|gb|EFX33281.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
LSU-61]
gi|323155421|gb|EFZ41604.1| methyltransferase GidB [Escherichia coli EPECa14]
gi|323161008|gb|EFZ46927.1| methyltransferase GidB [Escherichia coli E128010]
gi|323167014|gb|EFZ52753.1| methyltransferase GidB [Shigella sonnei 53G]
gi|323173365|gb|EFZ58994.1| methyltransferase GidB [Escherichia coli LT-68]
gi|323177760|gb|EFZ63344.1| methyltransferase GidB [Escherichia coli 1180]
gi|323189527|gb|EFZ74807.1| methyltransferase GidB [Escherichia coli RN587/1]
gi|323380888|gb|ADX53156.1| methyltransferase GidB [Escherichia coli KO11]
gi|323934909|gb|EGB31287.1| glucose inhibited division protein [Escherichia coli E1520]
gi|323944216|gb|EGB40296.1| glucose inhibited division protein [Escherichia coli H120]
gi|323949983|gb|EGB45867.1| glucose inhibited division protein [Escherichia coli H252]
gi|323954965|gb|EGB50743.1| glucose inhibited division protein [Escherichia coli H263]
gi|323959806|gb|EGB55456.1| glucose inhibited division protein [Escherichia coli H489]
gi|323971219|gb|EGB66465.1| glucose inhibited division protein [Escherichia coli TA007]
gi|324008008|gb|EGB77227.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 57-2]
gi|324018462|gb|EGB87681.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 117-3]
gi|324115904|gb|EGC09830.1| glucose inhibited division protein [Escherichia coli E1167]
gi|326340512|gb|EGD64311.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli O157:H7 str. 1044]
gi|326341578|gb|EGD65367.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli O157:H7 str. 1125]
gi|330908053|gb|EGH36572.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli AA86]
gi|331036761|gb|EGI08987.1| 16S rRNA methyltransferase GidB [Escherichia coli H736]
gi|331042064|gb|EGI14208.1| 16S rRNA methyltransferase GidB [Escherichia coli M605]
gi|331047417|gb|EGI19495.1| 16S rRNA methyltransferase GidB [Escherichia coli M718]
gi|331053299|gb|EGI25332.1| 16S rRNA methyltransferase GidB [Escherichia coli TA206]
gi|331062653|gb|EGI34573.1| 16S rRNA methyltransferase GidB [Escherichia coli TA271]
gi|331073016|gb|EGI44341.1| 16S rRNA methyltransferase GidB [Escherichia coli H591]
gi|332089410|gb|EGI94514.1| methyltransferase GidB [Shigella boydii 3594-74]
gi|332104817|gb|EGJ08163.1| ribosomal RNA small subunit methyltransferase G [Shigella sp. D9]
gi|332345730|gb|AEE59064.1| methyltransferase GidB [Escherichia coli UMNK88]
gi|332750749|gb|EGJ81157.1| methyltransferase GidB [Shigella flexneri 4343-70]
gi|332750897|gb|EGJ81303.1| methyltransferase GidB [Shigella flexneri K-671]
gi|332751743|gb|EGJ82141.1| methyltransferase GidB [Shigella flexneri 2747-71]
gi|332764003|gb|EGJ94240.1| methyltransferase GidB [Shigella flexneri 2930-71]
gi|332995987|gb|EGK15614.1| methyltransferase GidB [Shigella flexneri VA-6]
gi|332997090|gb|EGK16706.1| methyltransferase GidB [Shigella flexneri K-218]
gi|333013464|gb|EGK32835.1| methyltransferase GidB [Shigella flexneri K-304]
Length = 207
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|160893420|ref|ZP_02074205.1| hypothetical protein CLOL250_00969 [Clostridium sp. L2-50]
gi|156864815|gb|EDO58246.1| hypothetical protein CLOL250_00969 [Clostridium sp. L2-50]
Length = 240
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
+S LE+ + +Y L ++W+K +NL + ED I+H DSL + +
Sbjct: 12 DIELSDHQLEQFQKYYELLVEWNKVMNLTAIIEKEDVIIKHFADSLLLAKYKKLDESLSV 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFPGI I ++ V L++S NK+ FL V++ + R ++
Sbjct: 72 IDVGTGAGFPGIPLKIAFPGLK---VTLMDSLNKRVKFLNEVIRTLELDDIEAVHSRAED 128
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
Q D+ +RA+A+L +L E+ P++
Sbjct: 129 GGRNVQYREKYDLAVSRAVANLSSLSEFCMPFVK 162
>gi|332983461|ref|YP_004464902.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
gi|332701139|gb|AEE98080.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
Length = 240
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
L L ++ E +++ + + ++W++ INL S + I+H DSL +
Sbjct: 8 LNNEALKCGISLDDEAIDRFMAYKDMLIEWNEHINLTSITDDMGIVIKHFIDSLLCYSTG 67
Query: 69 -HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ ID+G+G GFPG+ I S++ L++ ++ K +FL V++ + +
Sbjct: 68 VIRPDARIIDIGTGAGFPGLALKIAFPSLKVCLMDSVQK---KLNFLDNVIKALSLEDVE 124
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ DV++ARA+A L L EY P+
Sbjct: 125 LIWGRAEDYACKKGYREAFDVVTARAVASLLVLAEYCLPFAK 166
>gi|283836164|ref|ZP_06355905.1| hypothetical protein CIT292_10590 [Citrobacter youngae ATCC 29220]
gi|291068358|gb|EFE06467.1| 16S rRNA methyltransferase GidB [Citrobacter youngae ATCC 29220]
Length = 207
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 13 GISLTDHQKTQLIAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLKGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI SI L++S K+ FLR V + E
Sbjct: 72 VGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELGLTNITPVQSRVEEFP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|238783014|ref|ZP_04627041.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
bercovieri ATCC 43970]
gi|238716015|gb|EEQ08000.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
bercovieri ATCC 43970]
Length = 206
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 9 ILRANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+++ N LLN + + +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 2 LIKLNSLLNAADIELPDQQKLQLIGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-VV 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 61 NPHLQGRRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELGLSNI 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E D + +RA A L +L + +
Sbjct: 118 EPVQSRVEEFAA-NPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|254477561|ref|ZP_05090947.1| methyltransferase GidB [Ruegeria sp. R11]
gi|214031804|gb|EEB72639.1| methyltransferase GidB [Ruegeria sp. R11]
Length = 204
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 66/152 (43%), Positives = 98/152 (64%), Gaps = 3/152 (1%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ +VSRET ++L+++ L KWS KINLV+ ST+ED W RH+ DS++V L +P W
Sbjct: 6 IAGVDVSRETYDRLKHYESLVQKWSPKINLVAKSTLEDVWERHIVDSVQVCDLVSFPETW 65
Query: 76 IDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSGGGFPG++ +I + V LIES +K +FLR +++ RG+V + RI++
Sbjct: 66 VDIGSGGGFPGVVVAIVAAEKAPDCQVTLIESDQRKCAFLRTALRECGVRGRVISDRIEK 125
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
M V+SARALADL LLE++ L +
Sbjct: 126 VAPM--GAGVLSARALADLSLLLEFAERHLSK 155
>gi|330505866|ref|YP_004382735.1| 16S rRNA methyltransferase GidB [Pseudomonas mendocina NK-01]
gi|328920152|gb|AEB60983.1| 16S rRNA methyltransferase GidB [Pseudomonas mendocina NK-01]
Length = 214
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIWI 76
+S + E+L + L +KW+K NL + ++ RH+ DSL V W+
Sbjct: 19 GIELSAQQQEQLLAYLGLLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFVAERGDNWL 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSGGG PG+ +I L++S KK FL V + +V R+ EA
Sbjct: 79 DVGSGGGMPGVPLAIMFPERR---FTLLDSNGKKTRFLVQVKLELKLANLEVVHNRV-EA 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
+ D IS+RA + L+ ++
Sbjct: 135 YRPEQPFDGISSRAFSSLEDFSNWTRHL 162
>gi|319639611|ref|ZP_07994358.1| ribosomal RNA small subunit methyltransferase G [Neisseria mucosa
C102]
gi|317399182|gb|EFV79856.1| ribosomal RNA small subunit methyltransferase G [Neisseria mucosa
C102]
Length = 209
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ KL + L KW+K NL + H+ DSL +
Sbjct: 7 LRDGIQALGLDIDEAKQAKLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLSYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ +D+GSGGG PGI T+I ++ + L+++ KK +FL+ V + +V
Sbjct: 67 EHAQTMLDVGSGGGQPGIPTAICRPDLD---ITLLDANTKKTAFLQQAVIELGLKNVRVI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ A T DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAAADCRT--DVITSRAFAELADFVNWTEHLLKD 159
>gi|161170271|gb|ABX59241.1| predicted S-adenosylmethionine-dependent methyltransferase
[uncultured marine bacterium EB000_55B11]
gi|297183800|gb|ADI19923.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 213
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 4/150 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDL 78
+VSRET++ L + L KW+K INLVS ST+ W RH DS +++ P + +D+
Sbjct: 15 DVSRETIQSLRVYANLLEKWNKTINLVSKSTINHMWERHFLDSAQLWPHIPENAKTLVDI 74
Query: 79 GSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSG GF G++ +I V LIES +K +F+R V ++T ++ RI+E
Sbjct: 75 GSGAGFAGLVLAIIGKEKNPNLRVVLIESDTRKCAFMRNVSRETNINVEIITKRIEEVDD 134
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV++ARALA + LL+YS L +K
Sbjct: 135 L--KADVVTARALATVSQLLDYSKNILKKK 162
>gi|157151065|ref|YP_001449807.1| 16S rRNA methyltransferase GidB [Streptococcus gordonii str.
Challis substr. CH1]
gi|189040724|sp|A8AVJ7|RSMG_STRGC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157075859|gb|ABV10542.1| methyltransferase GidB [Streptococcus gordonii str. Challis substr.
CH1]
Length = 237
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYP 72
++ ++ E ++ L ++W++KINL + + + +++H DS+
Sbjct: 12 QQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQD 71
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 72 HKLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGR 128
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 129 AEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|322387493|ref|ZP_08061103.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
gi|321142022|gb|EFX37517.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
Length = 245
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
N++ + + E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 20 QQNINLTDQQKAQFERYFELLVEWNEKINLTAITEKEEVYLKHFYDSIAPILQGLIENQE 79
Query: 76 I---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACR 131
I D+G+G GFP + I ++ V +I+S NK+ +FL+ + +K + R
Sbjct: 80 IKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAEKLDLEGVHFYHGR 136
Query: 132 IQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ D+++ARA+A + L E + P+L
Sbjct: 137 AEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLK 173
>gi|251791739|ref|YP_003006460.1| methyltransferase GidB [Dickeya zeae Ech1591]
gi|247540360|gb|ACT08981.1| methyltransferase GidB [Dickeya zeae Ech1591]
Length = 206
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
IL + ++ + +L + L KW+K NL S E +RH+ DS V
Sbjct: 1 MLEILNSLLQRAGMTLTDQQKNQLIQYVALLHKWNKAYNLTSVREPEQMLVRHIMDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ H + +ID+G+G G PG+ +I L++S K+ FLR V +
Sbjct: 60 VEPHLVGNRFIDVGTGPGLPGVPLAIVRPD---AHFVLLDSLGKRVRFLRQVQHELNLGN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R+++ P D + +RA A L ++ +
Sbjct: 117 IEPVQSRVEDFPS-DPPFDGVISRAFASLQDMVNWCHHL 154
>gi|227873160|ref|ZP_03991451.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
gi|227840991|gb|EEJ51330.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
Length = 248
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--------- 68
+++ + L + +Y + ++ +K +NL + + ED ++H D L + Q+
Sbjct: 17 GLSLTEQQLLQFYQYYQILVEKNKVMNLTAITEEEDVIVKHFVDCLAICQMNVSRETFSE 76
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKV 127
+D+G+G GFPG++ I SI+ L + ++ + FL +V+ K
Sbjct: 77 WIEGKSVMDVGTGAGFPGLVLKIAFPSIQLSLSDSLQK---RIRFLEELVESLGLEGVKF 133
Query: 128 FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ + D++ +RA+A+L TL EY P++
Sbjct: 134 YHGRAEDLGHDKNLREQYDLVVSRAVANLATLSEYDLPFVKP 175
>gi|291536996|emb|CBL10108.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis M50/1]
Length = 238
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y + ++ + + + +Y L ++ +K +NL + + ++ +H
Sbjct: 1 MSYNL--EQFKDGLKELQIELNEKQISQFLKYYELLVETNKVMNLTAITEFDEVVEKHFL 58
Query: 61 DSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + +++ + +DLG+G GFPGI I ++E + L +S NK+ FL V+
Sbjct: 59 DSLSLCRVYDLKIDAKILDLGTGAGFPGIPLKIAFPNLE---LVLADSLNKRIKFLNQVI 115
Query: 119 QKTAAR-GKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R +E DV +RA+A+L +L EY P++
Sbjct: 116 DELELKDITAVHARAEELGRNKDYREQFDVCVSRAVANLSSLSEYCIPFVK 166
>gi|308188711|ref|YP_003932842.1| glucose inhibited division protein B [Pantoea vagans C9-1]
gi|308059221|gb|ADO11393.1| glucose inhibited division protein B [Pantoea vagans C9-1]
Length = 207
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++S + ++L + L KW+K NL S + +RH+ DS+ V H
Sbjct: 5 LTSLLKAAGISLSDQQKQQLVAYVGLLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVAPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I + L++S K+ FLR V +
Sbjct: 64 LKGSRFIDVGTGPGLPGIPLAIVMPD---AHFTLLDSLGKRVRFLRQVQHELGLTNITPV 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L ++ +
Sbjct: 121 QSRVEAFPAEPPFDGVISRAFASLTDMVNWCHHL 154
>gi|153008196|ref|YP_001369411.1| 16S rRNA methyltransferase GidB [Ochrobactrum anthropi ATCC 49188]
gi|166224600|sp|A6WX78|RSMG_OCHA4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151560084|gb|ABS13582.1| methyltransferase GidB [Ochrobactrum anthropi ATCC 49188]
Length = 213
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 66/146 (45%), Positives = 88/146 (60%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L F LF KWSK INL S ST+ + W RH+ DS ++F L W+D+GS
Sbjct: 17 VSRETANRLIAFEDLFRKWSKAINLASPSTLNELWTRHILDSAQLFPLASDAKHWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++LIES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAEQPGGAIDLIESAGKKAAFLRTAAGHLHVPARVHSTRIEAMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L+ L + WL
Sbjct: 137 TPQVVTARALASLNDLFGLTELWLTN 162
>gi|330447282|ref|ZP_08310932.1| methyltransferase GidB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491473|dbj|GAA05429.1| methyltransferase GidB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 206
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L V+ + L++L + L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MKQRLVQLIAQTDLQVTEQQLDQLIGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + +ID+G+G G PGI +I L++S K+ F+R V+ +
Sbjct: 60 VSKYLGGTNYIDVGTGPGLPGIPLAIMCPDK---SFTLLDSLGKRIRFIRQVIHELKITN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E + D + +RA A + ++ +
Sbjct: 117 VTPVQSRVEEFEAEDGFDAVLSRAFASMADMVNWCHHL 154
>gi|152972649|ref|YP_001337795.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238897247|ref|YP_002921995.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae NTUH-K2044]
gi|166224594|sp|A6TG44|RSMG_KLEP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150957498|gb|ABR79528.1| glucose-inhibited division protein B [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549577|dbj|BAH65928.1| glucose-inhibited division protein B [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 207
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL+ +++ +L + L KW+K NL S + +RH+ DS+ +
Sbjct: 1 MLNKLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSI-I 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VAPYLQGSRFIDVGTGPGLPGIPLAIVCPE---SHFTLLDSLGKRVRFLRQVQHELKLDN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L+ ++ +
Sbjct: 117 VTPVQSRVEAFPAEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|90409268|ref|ZP_01217370.1| GidB [Psychromonas sp. CNPT3]
gi|90309628|gb|EAS37811.1| GidB [Psychromonas sp. CNPT3]
Length = 211
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR+ L T VS + + +L L +KW+K NL S + I+H+ DS+ V H
Sbjct: 11 LRSMISLTTLKVSDKQINQLIQLLELLVKWNKAYNLTSVRDPQQMLIKHIMDSI-VVSPH 69
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
ID+G+G G PG+ +I + L++S K+ F+R V + + F
Sbjct: 70 LQGQRLIDVGTGPGLPGLPLAILNPDKQ---FVLLDSLGKRLRFIRQAVLELGLKNVEFI 126
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E DV+ +RA A L +L +
Sbjct: 127 QSRVEEYHPEEKFDVVLSRAFASLADMLNWCKHL 160
>gi|56965872|ref|YP_177606.1| 16S rRNA methyltransferase GidB [Bacillus clausii KSM-K16]
gi|81600611|sp|Q5WAG5|RSMG_BACSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56912118|dbj|BAD66646.1| glucose inhibited division protein B [Bacillus clausii KSM-K16]
Length = 237
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNT-YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++ L +S E+ + ++ L ++W++K+NL + + +D +++H DS+
Sbjct: 1 MGEEFFSSLLAEQKIVLSSTQHEQFKRYFELLVEWNEKMNLTAITEKKDVYLKHFYDSIT 60
Query: 65 VFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+P+ +D+G+G GFP + I ++ +++I+S NK+ FL ++ +
Sbjct: 61 PSFYYPFTDQKIVDIGAGAGFPSLPLKILYPDLQ---ISIIDSLNKRIGFLTHLANELEL 117
Query: 124 RGKVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
G F E DV ARA+A + L E P++
Sbjct: 118 TGVSFYHDRAELAGKSKHHREIYDVAIARAVARMSVLSELCLPFVK 163
>gi|237735332|ref|ZP_04565813.1| ribosomal RNA small subunit methyltransferase G [Mollicutes
bacterium D7]
gi|229381077|gb|EEO31168.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
D7]
Length = 233
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 6 SNSI-LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + ++ + + + + ++ + ++W++K+NL + + E +++H DSL
Sbjct: 1 MNELEFIKQLETKGITLTPQQVNQFKQYFKILVEWNEKMNLTAITDEEGVYLKHFYDSLT 60
Query: 65 V-FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ F +D+G+G GFP + I ++ + +++S K+ +FL ++ ++
Sbjct: 61 IAFDFDFTDQSIVDVGAGAGFPSVPLKIVYPELK---ITIVDSLTKRITFLNHLFKELNL 117
Query: 124 -RGKVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++ CD++ ARA+A L+ L E P +
Sbjct: 118 SNCQAISARAEDYAKDHRQKCDIVMARAVARLNILDELCLPLVK 161
>gi|89092257|ref|ZP_01165211.1| Glucose inhibited division protein [Oceanospirillum sp. MED92]
gi|89083345|gb|EAR62563.1| Glucose inhibited division protein [Oceanospirillum sp. MED92]
Length = 212
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ +S +++L + L +KW+K NL + + RH+ DSL V
Sbjct: 13 LKQGISQLGLALSEHQIDQLIRYLNLLIKWNKAYNLTAVRNPMEMIDRHLIDSLSVVPFI 72
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
ID+GSG G PGI +I + V ++S KK F V + V
Sbjct: 73 E-GKRIIDVGSGPGLPGIPLAICYPELP---VTTLDSNGKKTRFQLQVKGELGLNNLTVV 128
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ D + +RA A L+ ++ ++ +Q+
Sbjct: 129 NERVENCN--FEPFDQVISRAFASLEDMINWTQQLCHQE 165
>gi|323486762|ref|ZP_08092081.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323694904|ref|ZP_08109054.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
gi|323399901|gb|EGA92280.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323500994|gb|EGB16906.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
Length = 242
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ ++ +E+ +Y L + W+ INL + + +++ +H DSL + ++
Sbjct: 9 LKEELKQIDVELTERQIEQFYNYYELLIHWNSMINLTAITQLDEVVTKHFVDSLSLKKII 68
Query: 70 ----PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
ID+G+G GFPGI I ++ + L++S NK+ FL VV+
Sbjct: 69 VDIGQKSQSLIDVGTGAGFPGIPLKIAFPELK---ITLLDSLNKRVKFLNEVVETLQLDN 125
Query: 125 GKVFACRIQEAPQM---ITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + T D+ +RA+A+L TL EY P++
Sbjct: 126 ITAVHGRAEDYGRDNVSRETFDICVSRAVANLSTLAEYCMPFVK 169
>gi|241889363|ref|ZP_04776664.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
gi|241863906|gb|EER68287.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
Length = 237
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 10 LRANYLLN------TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ N +S ++ +Y L ++W++KINL + + ++F+ +H DS+
Sbjct: 1 MNKEQFYNAVKEKVGIELSELQKDQYSKYYDLVVEWNQKINLTAITEEDEFYTKHFFDSI 60
Query: 64 R--VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
++ + D+GSG GFP I I +++ +V+ + + K + ++ + T
Sbjct: 61 SLAFYKDYSNIESICDVGSGAGFPSIPLKILYPNLKVTIVDSLNKRIKFLNLVKDELGLT 120
Query: 122 AAR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + + + ++++ARA+A L+ L E P + +
Sbjct: 121 DCNFVHARAEEFGQNKEYRESFEIVTARAVARLNILAELCLPLVKK 166
>gi|183597129|ref|ZP_02958622.1| hypothetical protein PROSTU_00368 [Providencia stuartii ATCC 25827]
gi|188023439|gb|EDU61479.1| hypothetical protein PROSTU_00368 [Providencia stuartii ATCC 25827]
Length = 207
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L L ++ + ++L + L KW+K NL S + IRH+ DS+ V
Sbjct: 7 LTRLSALANIELTDQQKQQLVGYVELLAKWNKAYNLTSVRDPQQMLIRHIMDSI-VVNGQ 65
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +ID+G+G G PG+ +I L++S K+ FL+ V +
Sbjct: 66 LKGTSFIDVGTGPGLPGVPLAIVRPD---SHFVLLDSLGKRIRFLKQVQHELGLNNIEPL 122
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A L +L +
Sbjct: 123 QSRVEEYQPEAGFDGVISRAFASLSDMLSWCHHL 156
>gi|90962568|ref|YP_536484.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius UCC118]
gi|122448467|sp|Q1WRS8|RSMG_LACS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|90821762|gb|ABE00401.1| Methyltransferase [Lactobacillus salivarius UCC118]
Length = 241
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SLRVFQLHPYPS 73
N++ E +++ E +Y ++ +K +NL + + + +++H D +L V L
Sbjct: 14 GLNLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDLQTEEL 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G GFP + I ++ + +++S NK+ FL+ + QK R
Sbjct: 74 SLCDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKLNLQDVHFHHARA 130
Query: 133 QEAPQ----MITTCDVISARALADLDTLLEYSFPWLY 165
+E D+++ARA+A + L E P
Sbjct: 131 EEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAK 167
>gi|312868207|ref|ZP_07728407.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
gi|311095952|gb|EFQ54196.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
Length = 237
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+ ++ E+ E ++ L ++W++KINL + + ++ +++H DS+ + I
Sbjct: 14 GFPLTDRQKEQYERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIAPILQGLIENQPIR 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL + ++ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLK 165
>gi|295103708|emb|CBL01252.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
SL3/3]
Length = 235
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 9 ILRANYLLN-----TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++ L ++ L++L+ F + + +++K+NL + + E +H DSL
Sbjct: 1 MIDKQRLEEKCSTWNIALTGTQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSL 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+D+G+G GFPGI+T I +E + L+E K+ FL+Y +
Sbjct: 61 LFASQPEVAGRMVDVGAGAGFPGIVTKIFKPELE---LTLMEPTGKRVDFLKYACAQLGL 117
Query: 124 RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
G FA E D+ SARA+A L L EY P +
Sbjct: 118 TGVEFAKERAEEAARKVWREQFDLASARAVAALPMLAEYCLPLVK 162
>gi|77405787|ref|ZP_00782871.1| methyltransferase GidB [Streptococcus agalactiae H36B]
gi|77175574|gb|EAO78359.1| methyltransferase GidB [Streptococcus agalactiae H36B]
Length = 237
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHP 70
+ + ++ + ++ E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 10 LIEHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDN 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
P +D+G+G GFP I I I+ + +I+S NK+ +FL + K F
Sbjct: 70 SPLSILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANKLELSGVHFFH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFGQDKVFRAKFDIVTARAVARMQVLAELTIPFLK 165
>gi|167754940|ref|ZP_02427067.1| hypothetical protein CLORAM_00444 [Clostridium ramosum DSM 1402]
gi|167704990|gb|EDS19569.1| hypothetical protein CLORAM_00444 [Clostridium ramosum DSM 1402]
Length = 233
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 6 SNSI-LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + ++ + + + + ++ + ++W++K+NL + + E +++H DSL
Sbjct: 1 MNELEFIKQLETKGITLTPQQVNQFKQYFKILVEWNEKMNLTAITDEEGVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + I D+G+G GFP + I ++ + +++S K+ +FL ++ ++
Sbjct: 61 IAFDFDFTDQNIVDVGAGAGFPSVPLKIVYPELK---ITIVDSLTKRITFLNHLFKELNL 117
Query: 124 -RGKVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++ CD++ ARA+A L+ L E P +
Sbjct: 118 SNCQAISARAEDYAKDHRQKCDIVMARAVARLNILDELCLPLVK 161
>gi|146309630|ref|YP_001190095.1| glucose-inhibited division protein B [Pseudomonas mendocina ymp]
gi|189040709|sp|A4Y197|RSMG_PSEMY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145577831|gb|ABP87363.1| 16S rRNA m(7)G-527 methyltransferase [Pseudomonas mendocina ymp]
Length = 214
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIWI 76
+S E+L + L +KW+K NL + ++ RH+ DSL V W+
Sbjct: 19 GIELSERQQEQLLAYLGLLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFVAERGDNWL 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSGGG PGI +I L++S KK FL V + +V R++
Sbjct: 79 DVGSGGGMPGIPLAIMFPERR---FTLLDSNGKKTRFLVQVKLELKLANLEVVHSRVETY 135
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
D IS+RA + L +++
Sbjct: 136 RP-EQPFDGISSRAFSSLQDFSDWTRHL 162
>gi|254557729|ref|YP_003064146.1| glucose-inhibited division protein B [Lactobacillus plantarum JDM1]
gi|254046656|gb|ACT63449.1| glucose-inhibited division protein B [Lactobacillus plantarum JDM1]
Length = 244
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + L + ++ L + +K+ NL + + + +++H DSL
Sbjct: 1 MNPEEFKQALAQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLT 60
Query: 65 VFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I ++ V +++S NK+ +FL +VQ+
Sbjct: 61 PAFYVPALRDQQLTICDVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQ 117
Query: 121 TAAR-GKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
K F R + + D+++ARA+A L L E P +
Sbjct: 118 LGLTGVKTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVK 167
>gi|254977335|ref|ZP_05273807.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-66c26]
gi|255094666|ref|ZP_05324144.1| 16S rRNA methyltransferase GidB [Clostridium difficile CIP 107932]
gi|255316419|ref|ZP_05358002.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-76w55]
gi|255519079|ref|ZP_05386755.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-97b34]
gi|255652262|ref|ZP_05399164.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-37x79]
gi|306521977|ref|ZP_07408324.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-32g58]
Length = 239
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 6 SNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N+I + +N+ + LEK + + + ++W+KK+NL ++ +I+H DS+
Sbjct: 1 MNNIELLKNGIEGFNIDTNDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDSI 60
Query: 64 RV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
ID+G+G GFPGI I L S+E + L++S NK+ +FL V +
Sbjct: 61 SAVKNGYIKNGMSIIDVGTGAGFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVL 117
Query: 122 AA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ DV +ARA+A L L+E+ P++
Sbjct: 118 ELDNITFIHGRAEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVK 165
>gi|313496412|gb|ADR57778.1| RsmG [Pseudomonas putida BIRD-1]
Length = 216
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLG 79
++ E EKL + L +KW+K NL + ++ RH+ DSL V +H W+D+G
Sbjct: 24 LTAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFIHNGRDNWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGG PGI +I V ++++ KK FL V + + EA Q
Sbjct: 84 SGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELRLDNLMVIHSRVEAFQPA 140
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
D I +RA + ++ ++
Sbjct: 141 QPFDGIISRAFSSMENFTNWTRHL 164
>gi|90421003|ref|ZP_01228907.1| glucose-inhibited division protein B [Aurantimonas manganoxydans
SI85-9A1]
gi|90334781|gb|EAS48557.1| glucose-inhibited division protein B [Aurantimonas manganoxydans
SI85-9A1]
Length = 240
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+T NVSRETLE+L+ + L +W ++NLV+ +T+ D W RH+ DSL + +L P +
Sbjct: 42 EFLSTRNVSRETLERLDRYVALLTEWQTRMNLVAPATIGDVWSRHIADSLALERLLPNVT 101
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ +DLGSG G PG++ + ++ V+L+E+ +KK +FLR V + G RI+
Sbjct: 102 VCVDLGSGAGLPGLVIAAARPAL---SVDLVEANSKKIAFLRAVQRDLGLSGMAHGARIE 158
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++ D++ ARALA L L P +
Sbjct: 159 DCGAVLAKADIVIARALASLTELFALVAPHIR 190
>gi|154503058|ref|ZP_02040118.1| hypothetical protein RUMGNA_00880 [Ruminococcus gnavus ATCC 29149]
gi|153796299|gb|EDN78719.1| hypothetical protein RUMGNA_00880 [Ruminococcus gnavus ATCC 29149]
Length = 237
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ ++ E+ +Y L ++W+K +NL + ++ +H DSL +
Sbjct: 1 MENKFEQQLSQLDIRLTERQKEQFHQYYELLVEWNKVMNLTGITEYDEVNEKHFVDSLAI 60
Query: 66 FQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + ID+G+G GFPG+ I ++ V L++S K+ +FL VV+K
Sbjct: 61 VKTVDMNQVNSVIDIGTGAGFPGLPLKIAFPHLK---VVLLDSLKKRINFLDAVVEKLGL 117
Query: 124 -RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+ +RA+A+L TL EY P++
Sbjct: 118 EDVETLHGRAEDFAKQTAYREQFDLCVSRAVANLSTLSEYCIPYIR 163
>gi|330961497|gb|EGH61757.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 214
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S+ ++L + L +KW+K NL + ++ RH+ DSL V + W+D
Sbjct: 21 GIDLSQAQHDQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWMD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I V+L++S KK F V + E Q
Sbjct: 80 VGSGGGMPGIPMAILFPE---RHVSLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAENYQ 136
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 137 PDAPFDGIISRAFSSLEDFAGWTRHM 162
>gi|194431148|ref|ZP_03063441.1| 16S rRNA methyltransferase GidB [Shigella dysenteriae 1012]
gi|194420603|gb|EDX36679.1| 16S rRNA methyltransferase GidB [Shigella dysenteriae 1012]
gi|320180078|gb|EFW55020.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Shigella boydii ATCC 9905]
gi|332084594|gb|EGI89788.1| methyltransferase GidB [Shigella boydii 5216-82]
gi|332084733|gb|EGI89919.1| methyltransferase GidB [Shigella dysenteriae 155-74]
Length = 207
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 7/158 (4%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A L+ ++ +
Sbjct: 117 IGPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|227891371|ref|ZP_04009176.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
gi|227866760|gb|EEJ74181.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
Length = 241
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SL 63
R + N++ E +++ E +Y ++ +K +NL + + + +++H D +L
Sbjct: 4 EEFRQSLAEQGLNLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLAL 63
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V L D+G+G GFP + I ++ + +++S NK+ FL+ + QK
Sbjct: 64 TVKDLQTEELSLCDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKLNL 120
Query: 124 -RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPWLY 165
R +E D+++ARA+A + L E P
Sbjct: 121 QDVHFHHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAK 167
>gi|160944277|ref|ZP_02091506.1| hypothetical protein FAEPRAM212_01786 [Faecalibacterium prausnitzii
M21/2]
gi|158444459|gb|EDP21463.1| hypothetical protein FAEPRAM212_01786 [Faecalibacterium prausnitzii
M21/2]
Length = 235
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 9 ILRANYLLN-----TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++ L ++ L++L+ F + + +++K+NL + + E +H DSL
Sbjct: 1 MIDKQRLEEKCSTWNIALTGTQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSL 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+D+G+G GFPGI+T I +E + L+E K+ FL+Y +
Sbjct: 61 LFASQPEVAGRMVDVGAGAGFPGIVTKIFKPELE---LTLMEPTGKRVEFLKYACAQLGL 117
Query: 124 RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
G FA E D+ SARA+A L L EY P +
Sbjct: 118 TGVEFAKERAEEAARKVWREQFDLASARAVAALPMLAEYCLPLVK 162
>gi|146313754|ref|YP_001178828.1| 16S rRNA methyltransferase GidB [Enterobacter sp. 638]
gi|166989745|sp|A4WGE7|RSMG_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145320630|gb|ABP62777.1| 16S rRNA m(7)G-527 methyltransferase [Enterobacter sp. 638]
Length = 207
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + IRH+ DS+ V H +ID
Sbjct: 13 GISLTDHQKNQLVAYVDMLNKWNKAYNLTSVRDPNEMLIRHILDSI-VVAPHLRGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI SI L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLSIVRPE---CHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEAFP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCKHL 154
>gi|90581141|ref|ZP_01236940.1| glucose-inhibited division protein B [Vibrio angustum S14]
gi|90437662|gb|EAS62854.1| glucose-inhibited division protein B [Vibrio angustum S14]
Length = 206
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L V+ + L++L + L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MKQRLVQLIAQTELQVTEQQLDQLIGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + +ID+G+G G PGI +I L++S K+ F+R V+ +
Sbjct: 60 VSHYLDGATYIDVGTGPGLPGIPLAIMCPDK---SFTLLDSLGKRIRFIRQVIHELKITN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E + D + +RA A + ++ +
Sbjct: 117 VTPVQSRVEEFEAGDGFDAVLSRAFASMADMVNWCHHL 154
>gi|331086946|ref|ZP_08336022.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409607|gb|EGG89046.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 240
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
+ E+ + FY + ++W++ +NL + E+ +H DS+ + + ID+
Sbjct: 17 LDDRQKEQFDLFYEILVEWNEFMNLTGITEYEEVNEKHFVDSVSIVKAMDMKSVKSVIDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-- 135
G+G GFPGI I +E V L++S NK+ FL V++K +G + R ++
Sbjct: 77 GTGAGFPGIPLKIVFPELE---VVLLDSLNKRVKFLNAVIEKLQLKGIRAIHGRAEDYAK 133
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ +RA+A+L TL EY P++ +
Sbjct: 134 QQEYREQFDLCVSRAVANLATLSEYCLPYVKK 165
>gi|261380617|ref|ZP_05985190.1| 16S rRNA methyltransferase GidB [Neisseria subflava NJ9703]
gi|284796595|gb|EFC51942.1| 16S rRNA methyltransferase GidB [Neisseria subflava NJ9703]
Length = 209
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ KL + L KW+K NL + H+ DSL + + +D
Sbjct: 15 GLDIDEAKQAKLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLPYIEHAQTMLD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PGI T+I ++ + L+++ KK +FL+ V + +V + R++ A
Sbjct: 75 VGSGGGQPGIPTAICRPDLD---ITLLDANTKKTAFLQQAVIELGLKNVRVISGRVEAAA 131
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
DVI++RA A+L + ++ L
Sbjct: 132 DCR--ADVITSRAFAELADFVNWTEHLLKD 159
>gi|228474165|ref|ZP_04058902.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|314935196|ref|ZP_07842549.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
gi|228271860|gb|EEK13197.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|313656531|gb|EFS20270.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
Length = 240
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++ + ++ + +Y L ++W++K+NL S + + +++H DS+ +
Sbjct: 7 LTKALSEQGIELTDQQQQQFQTYYRLLVEWNEKMNLTSITDEHEVYLKHFYDSITAGFYY 66
Query: 70 PYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ + +
Sbjct: 67 DFNQPLTLCDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAVELGLTQVS 123
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + T DV++ARA+A L L E P + +
Sbjct: 124 FVHDRAETFGKGVNRETYDVVTARAVARLTVLSELCLPLVKK 165
>gi|227889290|ref|ZP_04007095.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
gi|227850092|gb|EEJ60178.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
Length = 239
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 71/167 (42%), Gaps = 12/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N I + ++ + ++ +Y ++++KK+NL + +++H DS+
Sbjct: 1 MNPEIFAKELAKYGFELNEKQTKQFATYYDKLIEFNKKVNLTRIIDKNEVYLKHFFDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP + I ++ + +++S K+ FL +V
Sbjct: 61 PLLEFPDLFKGEKTLCDVGAGAGFPSLPIKILCPNL---SITIVDSLGKRLKFLDELVND 117
Query: 121 TAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPW 163
+ + R ++A + D+++ RA+A + L EY P
Sbjct: 118 LGLDKVTLVHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|237729051|ref|ZP_04559532.1| glucose-inhibited division protein B [Citrobacter sp. 30_2]
gi|226909673|gb|EEH95591.1| glucose-inhibited division protein B [Citrobacter sp. 30_2]
Length = 207
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 13 GISLTDHQKNQLIAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLKGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI SI L++S K+ FLR V + A E
Sbjct: 72 VGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELALTNITPVQSRVEEFP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|157373140|ref|YP_001481129.1| 16S rRNA methyltransferase GidB [Serratia proteamaculans 568]
gi|166989555|sp|A8GLL1|RSMG_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157324904|gb|ABV44001.1| methyltransferase GidB [Serratia proteamaculans 568]
Length = 206
Score = 109 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + ++L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MQKKLDSLLKAAGITLPDRQKQQLLGYVGMLDKWNKAYNLTSVRDPQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLQGKRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELGLTN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E P D + +RA A L +L + +
Sbjct: 117 VEPVQSRVEEFPA-EPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|163851011|ref|YP_001639054.1| methyltransferase GidB [Methylobacterium extorquens PA1]
gi|238687374|sp|A9W327|RSMG_METEP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163662616|gb|ABY29983.1| methyltransferase GidB [Methylobacterium extorquens PA1]
Length = 211
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 84/150 (56%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L+ ++VSRET L+ + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 9 VLSEHHVSRETAASLDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLTVAPEATR 68
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W+DLGSG G PG+I ++ G V L+ES +K +FL + T A V RI+
Sbjct: 69 WLDLGSGAGIPGLILALAGKERPGFHVGLVESNARKCAFLSETARLTGAPVTVHNARIEA 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+T +++ ARALA L LL ++ P L
Sbjct: 129 VIGTLTDTEIVCARALAPLSQLLAWTEPLL 158
>gi|227524955|ref|ZP_03955004.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
gi|227087867|gb|EEI23179.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
Length = 244
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N N LL V+ + L + + ++ L ++ ++ +NL + + + +++H DS+
Sbjct: 1 MNIDQFINALLEQNIQVTDDQLGQFDAYFKLLVRTNEHVNLTTITEKSEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I ++ + +++S NK+ +FL +VQ+
Sbjct: 61 PAFFVSQIREQPVSLCDVGAGAGFPSIPLKILFPQLK---ITIVDSLNKRINFLTELVQQ 117
Query: 121 TAAR-GKVFACRIQEAPQM----ITTCDVISARALADLDTLLEYSFPWLY 165
+ + R +E + D+++ARA+A L L E P +
Sbjct: 118 LNLKDVTLVHARAEEFGNKKSVSRQSFDIVTARAVARLGVLSELCLPLVR 167
>gi|255308712|ref|ZP_05352883.1| 16S rRNA methyltransferase GidB [Clostridium difficile ATCC 43255]
Length = 239
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 6 SNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N+I + +N+ + LEK + + + ++W+KK+NL ++ +I+H DS+
Sbjct: 1 MNNIELLKNGIEGFNIDTNDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDSI 60
Query: 64 RV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
ID+G+G GFPGI I L S+E + L++S NK+ +FL V +
Sbjct: 61 SAVKNGYIKNGMSIIDVGTGAGFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVL 117
Query: 122 AA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ DV +ARA+A L L+E+ P++
Sbjct: 118 ELDNITFIHGRAEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVK 165
>gi|170682169|ref|YP_001746070.1| 16S rRNA methyltransferase GidB [Escherichia coli SMS-3-5]
gi|218702590|ref|YP_002410219.1| 16S rRNA methyltransferase GidB [Escherichia coli IAI39]
gi|226725355|sp|B7NR42|RSMG_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725358|sp|B1LL67|RSMG_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170519887|gb|ACB18065.1| methyltransferase GidB [Escherichia coli SMS-3-5]
gi|218372576|emb|CAR20450.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli IAI39]
Length = 207
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|240145750|ref|ZP_04744351.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|257202166|gb|EEV00451.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|291539799|emb|CBL12910.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis XB6B4]
Length = 242
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y + ++ + + + +Y L ++ +K +NL + + ++ +H
Sbjct: 5 MSYNL--EQFKDGLKELQIELNEKQISQFLKYYELLVETNKVMNLTAITEFDEVVEKHFL 62
Query: 61 DSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + +++ + +DLG+G GFPGI I ++E + L +S NK+ FL V+
Sbjct: 63 DSLSLCRVYDLKIDAKILDLGTGAGFPGIPLKIAFPNLE---LVLADSLNKRIKFLNQVI 119
Query: 119 QKTAAR-GKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R +E DV +RA+A+L +L EY P++
Sbjct: 120 DELELKDITAVHARAEELGRNKDYREQFDVCVSRAVANLSSLSEYCIPFVK 170
>gi|170766772|ref|ZP_02901225.1| methyltransferase GidB [Escherichia albertii TW07627]
gi|170124210|gb|EDS93141.1| methyltransferase GidB [Escherichia albertii TW07627]
Length = 207
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSSLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A L+ ++ +
Sbjct: 117 IAPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|323965808|gb|EGB61259.1| glucose inhibited division protein [Escherichia coli M863]
gi|327250892|gb|EGE62594.1| methyltransferase GidB [Escherichia coli STEC_7v]
Length = 207
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSSLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGDRFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|322390107|ref|ZP_08063642.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
gi|321143234|gb|EFX38677.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
Length = 237
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+ V+ E+ E ++ L ++W++KINL + + ++ +++H DS+ + I
Sbjct: 14 GFPVTDRQKEQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIAPILQGLIENQPIR 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL + ++ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLK 165
>gi|296875935|ref|ZP_06899994.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis ATCC
15912]
gi|296433010|gb|EFH18798.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis ATCC
15912]
Length = 237
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+ ++ E+ E ++ L ++W++KINL + + E+ +++H DS+ + I
Sbjct: 14 GFPLTDRQKEQYERYFELLVEWNEKINLTAITAKEEVYLKHFYDSIAPILQGLIENQPIR 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL + ++ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLNGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLK 165
>gi|213418554|ref|ZP_03351620.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 196
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 2 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 60
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 61 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 117
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 118 SEPPFDGVISRAFASLNDMVSWCHHL 143
>gi|91974911|ref|YP_567570.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris BisB5]
gi|123763116|sp|Q13E20|RSMG_RHOPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91681367|gb|ABE37669.1| methyltransferase GidB [Rhodopseudomonas palustris BisB5]
Length = 233
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L+ + L +W K NLV+ ST+ W RHV DSL++ L P W+D GS
Sbjct: 27 VSRETERRLDAYLDLLRQWQAKTNLVAPSTLPQLWTRHVADSLQLLTLAPDARRWLDFGS 86
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPGI+ + ++ +GG V L+E KKA+FLR ++ T + G V I + +
Sbjct: 87 GGGFPGIVLACAMAEHDGGHVTLVERNAKKAAFLREALRVTGSPGTVMLADIGDNVDRFP 146
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D I+ARA+A L L+ ++ P + +
Sbjct: 147 QGLDCITARAVAPLHQLIGFARPLMTE 173
>gi|322411150|gb|EFY02058.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 237
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ + ++ + E+ + ++ L ++W+ KINL + + D +++H DS+ + I
Sbjct: 13 DGFPLTMKQKEQFDTYFKLLVEWNNKINLTAITEENDVYLKHFYDSIAPILQGFLANEPI 72
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D+G+G GFP + I ++E +++ + + + L + F R +
Sbjct: 73 RLLDIGAGAGFPSLPMKILFPNLEVTIIDSLNKRIAFLTHLAEALALDKLH--FFHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ DV++ARA+A + L E + P+L
Sbjct: 131 DFGQDKDFRAQFDVVTARAVARMQVLAELTIPFLK 165
>gi|308181815|ref|YP_003925943.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|308047306|gb|ADN99849.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 244
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 13/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + L + ++ L + +K+ NL + + + +++H DSL
Sbjct: 1 MNPEEFKQALAQHEIALTAKQLGQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLT 60
Query: 65 VFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP I I ++ V +++S NK+ +FL +VQ+
Sbjct: 61 PAFYVPALRDQPLTICDVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQ 117
Query: 121 TAAR-GKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
K F R + + D+++ARA+A L L E P +
Sbjct: 118 LGLTGVKTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVK 167
>gi|227509064|ref|ZP_03939113.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191451|gb|EEI71518.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 245
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 6 SNS-ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + L V+ + L + + ++ L + ++ +NL + + + +++H DS+
Sbjct: 1 MNIDQFISALLAQNIQVTDDQLGQFDAYFKLLVATNEHVNLTTITEKSEVYLKHFYDSIT 60
Query: 65 VFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP I I ++ + +++S NK+ FL +VQ+
Sbjct: 61 PAFFVSQIREQPVSICDVGAGAGFPSIPLKILFPQLK---ITIVDSLNKRIHFLTELVQQ 117
Query: 121 TAAR-GKVFACRIQEAPQM----ITTCDVISARALADLDTLLEYSFPWLY 165
+ + R +E + D+++ARA+A L L E P +
Sbjct: 118 LHLKDVTLVHARAEEFGNKKSASRQSFDIVTARAVARLSVLSELCLPLVK 167
>gi|154245779|ref|YP_001416737.1| 16S rRNA methyltransferase GidB [Xanthobacter autotrophicus Py2]
gi|154159864|gb|ABS67080.1| glucose inhibited division protein [Xanthobacter autotrophicus Py2]
Length = 245
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLG 79
VSRETL +L L +KW K INLV+ +T+ D W RHV DSL++ P W+DLG
Sbjct: 20 VSRETLGRLTTIADLLVKWQKTINLVAPATLPDLWARHVGDSLQLVHHVPQTPLRWVDLG 79
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ-M 138
SGGGFPG++ + L+ +G ++L+ES +KA+FLR + V A RI++ Q +
Sbjct: 80 SGGGFPGLVVAAVLAERDGAHMHLVESDTRKAAFLREAARLAQLPVTVHAARIEQVAQAL 139
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
V+SARALA L LL+ + P+L
Sbjct: 140 APGTHVVSARALAPLPKLLDLAAPFLA 166
>gi|323975192|gb|EGB70296.1| glucose inhibited division protein [Escherichia coli TW10509]
Length = 207
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSSLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|197249483|ref|YP_002148810.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|226797830|sp|B5EZ06|RSMG_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|197213186|gb|ACH50583.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 207
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 13 GISLTDHQKTLLAAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|169351490|ref|ZP_02868428.1| hypothetical protein CLOSPI_02270 [Clostridium spiroforme DSM 1552]
gi|169291712|gb|EDS73845.1| hypothetical protein CLOSPI_02270 [Clostridium spiroforme DSM 1552]
Length = 233
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 10 LRANYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ + +S + +E+ + ++ L ++W++K+NL + + E +++H DS+
Sbjct: 1 MSKEEFIELLKNKGIILSDKQIEQFDKYFKLLVEWNEKMNLTAITDEESVYLKHFYDSIT 60
Query: 65 VFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G GFP I I ++ +V+ + + + L ++ T
Sbjct: 61 IAFDFEFASQSIVDVGAGAGFPSIPLKIIYPDLKVTIVDSLTKRITFLNHLFGALELTNC 120
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + A + A + CDV+ ARA+A L+ L E P +
Sbjct: 121 KA-ISARAEEYAKENREKCDVVMARAVARLNILDELCLPLVK 161
>gi|256848571|ref|ZP_05554012.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
gi|256714623|gb|EEU29603.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
Length = 242
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 12/164 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
R ++ + + +Y + ++ +NL + +D +++H DS+
Sbjct: 4 EEFRQALANQGIQLTDHQMNQFAQYYQDLVATNQVVNLTRITDEKDVYLKHFYDSITGSF 63
Query: 68 LHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P D+G+G GFP + I ++ V +++S NK+ +FL+ +V +
Sbjct: 64 ALPALRTESLSLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRINFLQELVARLNL 120
Query: 124 -RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFP 162
+ R ++ + DV++ARA+A L L E P
Sbjct: 121 DNVTLVHSRAEDFSKKGSAHRENYDVVTARAVARLSVLSELCLP 164
>gi|89074718|ref|ZP_01161176.1| glucose-inhibited division protein B [Photobacterium sp. SKA34]
gi|89049482|gb|EAR55043.1| glucose-inhibited division protein B [Photobacterium sp. SKA34]
Length = 206
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L V+ + L++L + L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MKQRLVQLIAQTELQVTEQQLDQLIGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI +I L++S K+ F+R V+ +
Sbjct: 60 VSQYLDGDSYIDVGTGPGLPGIPLAIMCPDK---SFTLLDSLGKRIRFIRQVIHELKITN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E + D + +RA A + ++ +
Sbjct: 117 VTPVQSRVEEFEAGDGFDAVLSRAFASMADMVNWCHHL 154
>gi|320162408|ref|YP_004175633.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
gi|319996262|dbj|BAJ65033.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
Length = 246
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++R L +S +E L + L+W++++NL + V ++H DS
Sbjct: 5 MEDLVRYAASLFDLTLSARQVEALRIYEQELLEWNERMNLTAIRDVPGIRVKHFLDSFSC 64
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P+ ID+G+G GFPGI I S+ + L++S KK F R+VVQK
Sbjct: 65 ALAWRDNPPASLIDIGTGAGFPGIPLKILYPSMR---LTLVDSVGKKVDFCRHVVQKLGL 121
Query: 124 -RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
R + R +E PQ D ARA+A ++ L EY P +
Sbjct: 122 DRVEALQARAEELGQNPQYREKYDCAVARAVAQMNILAEYLLPLVR 167
>gi|284007081|emb|CBA72356.1| methyltransferase (glucose-inhibited division protein B)
[Arsenophonus nasoniae]
Length = 208
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++L ++ ++ + +++L + L KW+K NL S + E IRH+ DS+ +
Sbjct: 9 TLLDKTDII----LTDQQIQQLIAYIELLNKWNKAYNLTSIRSPEQMIIRHILDSI-IVD 63
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +ID+G+G G PGI +I L++S K+ FLR + + +
Sbjct: 64 KYLVGKRFIDVGTGPGLPGIPLAIVRP---NAHFTLLDSLGKRVRFLRQIQHELMLKNIE 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E Q + D I +RA A + +L + Q
Sbjct: 121 PIQKRVEQYQPVEKFDGIVSRAFASIQDMLSWCQHLPKQ 159
>gi|331665394|ref|ZP_08366295.1| 16S rRNA methyltransferase GidB [Escherichia coli TA143]
gi|331057904|gb|EGI29890.1| 16S rRNA methyltransferase GidB [Escherichia coli TA143]
Length = 207
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSSLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|304385713|ref|ZP_07368057.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
gi|304328217|gb|EFL95439.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
Length = 243
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N R + VS + + + +Y ++ ++ +NL + + ++ +++H DS+
Sbjct: 1 MNPEEFRQALAERGWTVSDHQMWQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVT 60
Query: 65 V----FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
Q D+G+G GFP + I L ++ V +++S NK+ FL+ +V +
Sbjct: 61 PLLEAPQFFTPGIALCDVGAGAGFPSLPMKILLPELK---VTIVDSLNKRIKFLQALVDE 117
Query: 121 TAA-RGKVFACRIQ----EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R + + + +++ARA+A L L E P + Q
Sbjct: 118 LGLTDVELVHDRAETFGAKKSAYRASFALVTARAVARLSVLSELCLPLVKQ 168
>gi|149204375|ref|ZP_01881342.1| glucose-inhibited division protein B [Roseovarius sp. TM1035]
gi|149142260|gb|EDM30307.1| glucose-inhibited division protein B [Roseovarius sp. TM1035]
Length = 201
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 63/149 (42%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DL 78
+VSRET +LE + L +KW+ +INLVS ++++ W RH DS ++ L P DL
Sbjct: 6 DVSRETQARLEIYADLLVKWNPRINLVSRKSLDEMWTRHFADSAQIHALAPPSVDHWVDL 65
Query: 79 GSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ +I V LIES +KA+FLR V+++T V RI++
Sbjct: 66 GSGGGFPGLVVAILAQDGGSPRRVTLIESDARKAAFLRVVIRETGLNAMVLNDRIEKVRP 125
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
DV+SARAL DL LLE+S L Q
Sbjct: 126 QE--ADVLSARALTDLSGLLEFSERHLAQ 152
>gi|324995236|gb|EGC27148.1| glucose inhibited division protein B [Streptococcus sanguinis
SK678]
Length = 237
Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 10 LAQQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDN 69
Query: 74 IW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + +
Sbjct: 70 QDLKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFAQDKAFRAKFDLVTARAVARMQVLSELTIPYLK 165
>gi|239993738|ref|ZP_04714262.1| glucose-inhibited division protein B [Alteromonas macleodii ATCC
27126]
Length = 211
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+IL + + ++S + ++L + L KW+K NL S + ++H+ DSL +
Sbjct: 9 TILVSGLDALSLDLSDKQQQQLVDYVLLMDKWNKAYNLTSVRDPKQMMVKHILDSLAIVP 68
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ ID+G+G G PG+ +I L++S K+ F+ V
Sbjct: 69 F-LDGNNIIDVGTGPGLPGMPLAIAFPDK---SFTLLDSLGKRVRFMTQCVHTLGLTNVT 124
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
E T D++ +RA A L +L + +
Sbjct: 125 PVQSRVEEHNGDTPYDIVLSRAFASLKDMLHWCQHLV 161
>gi|225076865|ref|ZP_03720064.1| hypothetical protein NEIFLAOT_01916 [Neisseria flavescens
NRL30031/H210]
gi|224951810|gb|EEG33019.1| hypothetical protein NEIFLAOT_01916 [Neisseria flavescens
NRL30031/H210]
Length = 209
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ KL + L KW+K NL + H+ DSL + + +D
Sbjct: 15 GLDIDDAKQAKLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLPYIEHAQTMLD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PGI T+I ++ + L+++ KK +FL+ V + +V + R++ A
Sbjct: 75 VGSGGGQPGIPTAICRPDLD---ITLLDANTKKTAFLQQAVIELDLKNVRVISGRVEAAA 131
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
DVI++RA A+L + ++ L
Sbjct: 132 DCR--ADVITSRAFAELADFVNWTEHLLKD 159
>gi|253581095|ref|ZP_04858355.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847631|gb|EES75601.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 236
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIW 75
+S++ + FY ++ +K +NL + E+ +H DSL
Sbjct: 12 GIELSQKQKNQFIQFYEFLVEKNKVMNLTGITEFEEVLTKHFLDSLACVKAIDMTKVKTI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+D+G+G GFPG+ I +E L++S K+ +FL + G K R +E
Sbjct: 72 MDIGTGAGFPGVPLKIAFPHLEAC---LLDSLKKRVNFLEESFELLGLEGIKAIHGRAEE 128
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ +RA+++L TL EY P++
Sbjct: 129 YAKNKEYREKYDLCVSRAVSNLATLSEYCLPYVK 162
>gi|289826267|ref|ZP_06545379.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
Length = 207
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|261341603|ref|ZP_05969461.1| hypothetical protein ENTCAN_08065 [Enterobacter cancerogenus ATCC
35316]
gi|288315954|gb|EFC54892.1| 16S rRNA methyltransferase GidB [Enterobacter cancerogenus ATCC
35316]
Length = 207
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL+ +++ +L + + KW+K NL S + IRH+ DS+ V
Sbjct: 1 MLNKLSRLLDEAGISLTDHQKNQLVAYVDMLNKWNKAYNLTSVRDPNEMLIRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLKGERFIDVGTGPGLPGIPLSIVRPE---SHFTLLDSLGKRIRFLRQVQHELKLEN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L+ ++ +
Sbjct: 117 ITPVQSRVEAFPAEPPFDGVISRAFASLNDMVSWCKHL 154
>gi|325663374|ref|ZP_08151824.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470828|gb|EGC74058.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
Length = 240
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
+ E+ + FY + ++W++ +NL + E+ +H DS+ + + ID+
Sbjct: 17 LDDRQKEQFDLFYEILVEWNEFMNLTGITEYEEVNEKHFVDSVSIVKAMDMKSVKSVIDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-- 135
G+G GFPGI I +E V L++S NK+ FL V++K +G + R ++
Sbjct: 77 GTGAGFPGIPLKIVFPELE---VVLLDSLNKRVKFLNAVIEKLQLKGIRAIHGRAEDYAK 133
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ +RA+A+L TL EY P++ +
Sbjct: 134 QQEYREQFDLCVSRAVANLATLSEYCLPYVKK 165
>gi|238913126|ref|ZP_04656963.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|322617214|gb|EFY14119.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619098|gb|EFY15984.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625165|gb|EFY21993.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322634359|gb|EFY31093.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635243|gb|EFY31958.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642880|gb|EFY39465.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645084|gb|EFY41614.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650433|gb|EFY46845.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653625|gb|EFY49952.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661547|gb|EFY57770.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322661629|gb|EFY57848.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669791|gb|EFY65933.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671984|gb|EFY68103.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675005|gb|EFY71091.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683695|gb|EFY79708.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686082|gb|EFY82067.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192001|gb|EFZ77238.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323202724|gb|EFZ87761.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208301|gb|EFZ93242.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211736|gb|EFZ96569.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218598|gb|EGA03305.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323224770|gb|EGA09035.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323232522|gb|EGA16624.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235297|gb|EGA19382.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323241085|gb|EGA25122.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241366|gb|EGA25398.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248596|gb|EGA32526.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252105|gb|EGA35965.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258591|gb|EGA42254.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323268214|gb|EGA51690.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270628|gb|EGA54073.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 209
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|170026422|ref|YP_001722927.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis YPIII]
gi|238688495|sp|B1JR33|RSMG_YERPY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169752956|gb|ACA70474.1| methyltransferase GidB [Yersinia pseudotuberculosis YPIII]
Length = 206
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 7/161 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ + LL + + +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLKKLDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLQGSRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELGLNN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA D + +RA A L +L + +
Sbjct: 117 IELVQSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|300983836|ref|ZP_07176778.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 200-1]
gi|300306865|gb|EFJ61385.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 200-1]
Length = 217
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 8 SILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++L LL +++ +L + + KW+K NL S + +RH+ DS+
Sbjct: 10 TVLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI- 68
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
V + +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 69 VVAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLE 125
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 126 NIEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 164
>gi|325690245|gb|EGD32249.1| glucose inhibited division protein B [Streptococcus sanguinis
SK115]
Length = 237
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 12 QQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIENQE 71
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 72 LKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGR 128
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 129 AEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|323939197|gb|EGB35410.1| glucose inhibited division protein [Escherichia coli E482]
Length = 207
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL + +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSLLLKDASISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|182416728|ref|ZP_02948127.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237669667|ref|ZP_04529645.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379385|gb|EDT76880.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237654901|gb|EEP52463.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 239
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+S + E+ + L +W++KINL + + E+ +H D ++ F+ +
Sbjct: 15 GLQLSEQQYERFMKYMRLLQEWNEKINLTAITEDEEVVKKHFIDCIKAFKRDEFKKAETL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFPG+ +I ++ V L++S NK+ +FL VVQ+ R ++
Sbjct: 75 IDVGTGAGFPGLPIAIMREDLK---VTLLDSLNKRINFLNTVVQELGLKNVTTIHSRAED 131
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ ++RA+A++ L E+ P++
Sbjct: 132 GARNKDLREQFDISTSRAVANMSVLSEFCLPYVK 165
>gi|325697023|gb|EGD38910.1| glucose inhibited division protein B [Streptococcus sanguinis
SK160]
Length = 237
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 10 LAQQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDN 69
Query: 74 IW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + +K + +
Sbjct: 70 QELKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEKLGLDKVHFYH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q T D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFAQDKAFRTQFDLVTARAVARMQVLSELTIPYLK 165
>gi|324012754|gb|EGB81973.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 60-1]
Length = 216
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 8 SILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++L LL +++ +L + + KW+K NL S + +RH+ DS+
Sbjct: 9 TVLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI- 67
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
V + +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 68 VVAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLE 124
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 125 NIEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 163
>gi|331266663|ref|YP_004326293.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
gi|326683335|emb|CBZ00953.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
Length = 237
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ +S + + E ++ L ++W+++INL + + E+ +++H DS+
Sbjct: 4 ETFYSLLAEQNLPLSDQQKNQFERYFELLVEWNERINLTAITDKEEVYLKHFYDSIAPIL 63
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 64 QGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLD 120
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+++ARA+A + L E + P+L
Sbjct: 121 GVHFYHGRAEDFAQDKKFRAQFDMVTARAVARMQILSELTIPYLK 165
>gi|187933315|ref|YP_001887732.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
gi|238691667|sp|B2TRH8|RSMG_CLOBB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|187721468|gb|ACD22689.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
Length = 239
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+S+E EK + L +W++K+NL + + E+ +H DS++ F+ +
Sbjct: 15 GLELSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEEIIKKHFIDSIKAFKRDEFKEAKTL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G GFPGI +I +I+ V L++S NK+ +FL V +K + V R ++
Sbjct: 75 IDVGTGAGFPGIPVAIMNENIQ---VTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAED 131
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ ++RA+A++ L E+ P++
Sbjct: 132 GARQKNLRESFDIATSRAVANMSVLSEFCLPYVK 165
>gi|302063885|ref|ZP_07255426.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tomato
K40]
gi|302131969|ref|ZP_07257959.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|330876346|gb|EGH10495.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330964188|gb|EGH64448.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 214
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + W+D
Sbjct: 21 GIDLSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWMD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I ++L++S KK F V + E Q
Sbjct: 80 VGSGGGMPGIPMAILFPERN---ISLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAENYQ 136
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 137 PDVPFDGIISRAFSSLEDFAGWTRHM 162
>gi|28872708|ref|NP_795327.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213968449|ref|ZP_03396592.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato T1]
gi|301384264|ref|ZP_07232682.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tomato
Max13]
gi|37999548|sp|Q87TS4|RSMG_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28855964|gb|AAO59022.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213926737|gb|EEB60289.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato T1]
Length = 211
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + W+D
Sbjct: 18 GIDLSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWMD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I ++L++S KK F V + E Q
Sbjct: 77 VGSGGGMPGIPMAILFPERN---ISLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAENYQ 133
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 134 PDVPFDGIISRAFSSLEDFAGWTRHM 159
>gi|262367752|gb|ACY64309.1| glucose inhibited division protein B [Yersinia pestis D182038]
Length = 173
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 7/161 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ + LL + + +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLKKLDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLQGSRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELGLNN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA D + +RA A L +L + +
Sbjct: 117 IEPVQSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|300769525|ref|ZP_07079411.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300492940|gb|EFK28122.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 244
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + L + ++ L + +K+ NL + + + +++H DSL
Sbjct: 1 MNPEEFKQALAQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLT 60
Query: 65 VFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP I I ++ V +++S NK+ +FL +VQ+
Sbjct: 61 PAFYVPALRDQPLTICDVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQ 117
Query: 121 TAAR-GKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
A + F R + + D+++ARA+A L L E P +
Sbjct: 118 LALTGVQTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVK 167
>gi|218707386|ref|YP_002414905.1| 16S rRNA methyltransferase GidB [Escherichia coli UMN026]
gi|293407377|ref|ZP_06651299.1| ribosomal RNA small subunit methyltransferase G [Escherichia coli
FVEC1412]
gi|293413190|ref|ZP_06655856.1| 16S rRNA methyltransferase GidB [Escherichia coli B354]
gi|298383119|ref|ZP_06992714.1| glucose inhibited division protein B [Escherichia coli FVEC1302]
gi|300896069|ref|ZP_07114628.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 198-1]
gi|226725357|sp|B7NF56|RSMG_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218434483|emb|CAR15410.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli UMN026]
gi|284923854|emb|CBG36953.1| glucose inhibited division protein [Escherichia coli 042]
gi|291425668|gb|EFE98704.1| ribosomal RNA small subunit methyltransferase G [Escherichia coli
FVEC1412]
gi|291468323|gb|EFF10818.1| 16S rRNA methyltransferase GidB [Escherichia coli B354]
gi|298276955|gb|EFI18473.1| glucose inhibited division protein B [Escherichia coli FVEC1302]
gi|300360055|gb|EFJ75925.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 198-1]
Length = 207
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLTSLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|205354544|ref|YP_002228345.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205274325|emb|CAR39349.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326629679|gb|EGE36022.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 209
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|188588844|ref|YP_001922715.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
gi|226796820|sp|B2V1U8|RSMG_CLOBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188499125|gb|ACD52261.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
Length = 239
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+S+E EK + L +W++K+NL + + ED +H DS++ F+ +
Sbjct: 15 GLELSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEDIIKKHFIDSIKAFKRDEFKEAKTL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G GFPGI +I +I+ V L++S NK+ +FL V +K + V R ++
Sbjct: 75 IDVGTGAGFPGIPVAIMNENIQ---VTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAED 131
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ ++RA+A++ L E+ P++
Sbjct: 132 GARQKNLRESFDIATSRAVANMSVLSEFCLPYVK 165
>gi|225575642|ref|ZP_03784252.1| hypothetical protein RUMHYD_03735 [Blautia hydrogenotrophica DSM
10507]
gi|225037152|gb|EEG47398.1| hypothetical protein RUMHYD_03735 [Blautia hydrogenotrophica DSM
10507]
Length = 239
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++L + + E+ +Y L ++W+K +NL + E+ +H DSL V +
Sbjct: 5 TVLDRGCAELGIQLEQRQREQFVQYYELLIEWNKVMNLTGITEFEEVLQKHFVDSLSVKK 64
Query: 68 LHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR- 124
+ S ID+G+G GFPGI I ++ + L++S K+ FL V+ + +
Sbjct: 65 VVDLTKISRVIDVGTGAGFPGIPLKIVFPELK---ITLLDSLQKRIKFLNEVIGRLCLKD 121
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E + D+ +RA+A+L +L EY P++
Sbjct: 122 IEAIHGRAEEYARRKEYREQYDLCVSRAVANLASLSEYCLPYVK 165
>gi|296157545|ref|ZP_06840380.1| methyltransferase GidB [Burkholderia sp. Ch1-1]
gi|295892317|gb|EFG72100.1| methyltransferase GidB [Burkholderia sp. Ch1-1]
Length = 227
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
++S L KL + L KW+ NL + I+H+ DSL + PS
Sbjct: 25 GLDLSDAQLGKLLDYVALLSKWNAVYNLTAIRDPRQMLIQHILDSLAIVPHLAPLGPSSV 84
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+GSGGG PGI+ +I L V + + +KK +F + V R++
Sbjct: 85 LDVGSGGGLPGIVLAIVLPDW---TVTVNDIVHKKTAFQAQAKAELGLANLSVVTGRVES 141
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWLYQK 167
DVI +RA A+L + + + ++
Sbjct: 142 LQPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|290579746|ref|YP_003484138.1| putative glucose-inhibited division protein [Streptococcus mutans
NN2025]
gi|254996645|dbj|BAH87246.1| putative glucose-inhibited division protein [Streptococcus mutans
NN2025]
Length = 237
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-- 65
+ N+S + E+ + ++ L ++W+ KINL + + ++ +++H DS+
Sbjct: 4 EEFYQALAKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIAPLL 63
Query: 66 -FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ +D+G+G GFP + I ++ V +I+S NK+ FL +
Sbjct: 64 SGYIPNESLKLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRIKFLNLLADALELD 120
Query: 124 RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++ D+++ARA+A L L E + P+L
Sbjct: 121 KVHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLK 165
>gi|290473124|ref|YP_003465985.1| glucose-inhibited division protein [Xenorhabdus bovienii SS-2004]
gi|289172418|emb|CBJ79185.1| glucose-inhibited division protein, contains
S-adenosyl-L-methionine-dependent methyltransferase
domain [Xenorhabdus bovienii SS-2004]
Length = 206
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + +S E ++L + + KW+K NL S E +RH+ DS+ V
Sbjct: 5 LESLLVKTDIVLSLEQKQQLIAYVDMLNKWNKAYNLTSVRDPEQMLVRHIMDSI-VVNPF 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ + +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 64 LHGTRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELGLKNIDPV 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E D + +RA A L +L +
Sbjct: 121 QSRVEEFIPEPPFDGVISRAFASLQDMLSWCRHLPKP 157
>gi|207859096|ref|YP_002245747.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213026622|ref|ZP_03341069.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
gi|213579758|ref|ZP_03361584.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|224585668|ref|YP_002639467.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|206710899|emb|CAR35263.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224470196|gb|ACN48026.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|267996161|gb|ACY91046.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160405|emb|CBW19931.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|320088298|emb|CBY98059.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|323132235|gb|ADX19665.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
Length = 209
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|204928642|ref|ZP_03219841.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204322075|gb|EDZ07273.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|322630216|gb|EFY26987.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|323200495|gb|EFZ85573.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323219999|gb|EGA04469.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323262377|gb|EGA45935.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
Length = 207
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|238926046|ref|YP_002939564.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|238877723|gb|ACR77430.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|291526553|emb|CBK92140.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale DSM
17629]
Length = 237
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDL 78
++ LE+ E +Y + ++ +K +NL + + ++ +H DSL + ID+
Sbjct: 19 LNNSQLEQFELYYDMLIEKNKVMNLTAITDFDEVIEKHFLDSLFLCHTLDLNAEKNIIDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA-- 135
G+G GFPGI I ++ + L++S NK+ FL V++ + + R ++
Sbjct: 79 GTGAGFPGIPLKIAFPQLK---ITLLDSLNKRVGFLNEVIEALELKDIEAVHGRAEDFAR 135
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ +RA+A+L TL EY P++
Sbjct: 136 DKEHRAAYDICVSRAVANLSTLSEYCLPFVK 166
>gi|330718085|ref|ZP_08312685.1| 16S rRNA methyltransferase GidB [Leuconostoc fallax KCTC 3537]
Length = 239
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
L+ +L ++ +++ +Y L ++ ++ +NL + + + +++H DSL V Q
Sbjct: 10 LKKAGIL----LTETQVKQFHQYYELLVETNEHVNLTAITEQHEVYLKHFFDSLTVAQYV 65
Query: 69 ---HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
ID+G+G GFP + I + V L+++ K+ FL+ VV+
Sbjct: 66 TSLQTTNQTLIDVGTGAGFPALPLKIAFPQLR---VTLVDALQKRVRFLKTVVEALGLDH 122
Query: 125 GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ Q D +ARA+A L EY+ P++
Sbjct: 123 VTIVHGRAEDIGQEQRFREQFDYATARAVARTSVLAEYTLPFVK 166
>gi|156936120|ref|YP_001440036.1| 16S rRNA methyltransferase GidB [Cronobacter sakazakii ATCC
BAA-894]
gi|166224587|sp|A7MMW2|RSMG_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156534374|gb|ABU79200.1| hypothetical protein ESA_04014 [Cronobacter sakazakii ATCC BAA-894]
Length = 207
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +L + + KW+K NL S + +RH+ DS+ V + H + +ID
Sbjct: 13 GITLPEHQKAQLVAYVDMLNKWNKAYNLTSVRDPNEMLVRHIMDSI-VVEPHLKGTRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELKLDNITPVQSRVEAFP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L ++ +
Sbjct: 129 AEPPFDGVISRAFASLSDMVNWCHHL 154
>gi|331017734|gb|EGH97790.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 211
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L ++S E+L + L +KW+K NL + ++ RH+ DSL V +
Sbjct: 15 LELGIDLSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
WID+GSGGG PGI +I ++L++S KK F V + E
Sbjct: 74 WIDVGSGGGMPGIPMAILFPERN---ISLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE 130
Query: 135 APQMITTCDVISARALADLDTLLEYSFPW 163
Q D I +RA + L+ ++
Sbjct: 131 NYQPDVPFDGIISRAFSSLEDFAGWTRHM 159
>gi|152986230|ref|YP_001351677.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa PA7]
gi|166224603|sp|A6VF42|RSMG_PSEA7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150961388|gb|ABR83413.1| methyltransferase GidB [Pseudomonas aeruginosa PA7]
Length = 214
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ E +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDAEKKHQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPHAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGG PG+ +I + L++S KK FL V + EA + +
Sbjct: 83 GGGMPGVPLAILFPERR---LTLLDSNGKKTRFLTQVKLELKLANLDVVHSRVEAFRPES 139
Query: 141 TCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 140 PFDGIVSRAFSSLEDFANWTRHL 162
>gi|16762453|ref|NP_458070.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29143941|ref|NP_807283.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56415741|ref|YP_152816.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62182356|ref|YP_218773.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161616996|ref|YP_001590961.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167994880|ref|ZP_02575970.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168245183|ref|ZP_02670115.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168823140|ref|ZP_02835140.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194443339|ref|YP_002043121.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194448458|ref|YP_002047904.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197261829|ref|ZP_03161903.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197364669|ref|YP_002144306.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198243877|ref|YP_002217821.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200388761|ref|ZP_03215373.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|213052662|ref|ZP_03345540.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213649866|ref|ZP_03379919.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850448|ref|ZP_03381346.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|308065943|ref|NP_462772.3| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|54037193|sp|P64238|RSMG_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54041309|sp|P64237|RSMG_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|75479636|sp|Q57HX0|RSMG_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81599662|sp|Q5PJX2|RSMG_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040821|sp|A9MXB7|RSMG_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797831|sp|B5FN43|RSMG_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238690239|sp|B4TAY2|RSMG_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238690765|sp|B5BIP4|RSMG_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238693555|sp|B4SYE1|RSMG_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|25300022|pir||AF0953 glucose inhibited division protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16422447|gb|AAL22731.1| associated with glucose-inhibited division [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16504758|emb|CAD03122.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139577|gb|AAO71143.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56129998|gb|AAV79504.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129989|gb|AAX67692.1| associate with glucose-inhibited division [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161366360|gb|ABX70128.1| hypothetical protein SPAB_04817 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402002|gb|ACF62224.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406762|gb|ACF66981.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197096146|emb|CAR61742.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197240084|gb|EDY22704.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197938393|gb|ACH75726.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199605859|gb|EDZ04404.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205327328|gb|EDZ14092.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205336052|gb|EDZ22816.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205340562|gb|EDZ27326.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|261249012|emb|CBG26870.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|312915004|dbj|BAJ38978.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321222171|gb|EFX47244.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322716850|gb|EFZ08421.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|326625608|gb|EGE31953.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|332990722|gb|AEF09705.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 207
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|251780390|ref|ZP_04823310.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084705|gb|EES50595.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 239
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+S+E EK + L +W++K+NL + + ED +H DS++ F+ +
Sbjct: 15 GLELSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEDIIKKHFIDSIKAFKRDEFKKAKTL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G GFPGI +I +I+ V L++S NK+ +FL V +K + V R ++
Sbjct: 75 IDVGTGAGFPGIPVAIMNENIQ---VTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAED 131
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ ++RA+A++ L E+ P++
Sbjct: 132 GARQKNLRESFDIATSRAVANMSVLSEFCLPYVK 165
>gi|301020856|ref|ZP_07184917.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 69-1]
gi|331675224|ref|ZP_08375977.1| 16S rRNA methyltransferase GidB [Escherichia coli TA280]
gi|331685467|ref|ZP_08386053.1| 16S rRNA methyltransferase GidB [Escherichia coli H299]
gi|300398426|gb|EFJ81964.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 69-1]
gi|331067669|gb|EGI39071.1| 16S rRNA methyltransferase GidB [Escherichia coli TA280]
gi|331077838|gb|EGI49050.1| 16S rRNA methyltransferase GidB [Escherichia coli H299]
Length = 207
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLTSLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|319745619|gb|EFV97920.1| glucose inhibited division protein B [Streptococcus agalactiae ATCC
13813]
Length = 237
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHP 70
+ + ++ + ++ E ++ L ++W++KINL + + E +++H DS+ +
Sbjct: 10 LIEHGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEGVYLKHFYDSIAPILQGYIDN 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
P +D+G+G GFP I I I+ + +I+S NK+ +FL + + F
Sbjct: 70 SPLSILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFGQDKVFRAKFDIVTARAVARMQVLAELTIPFLK 165
>gi|166032901|ref|ZP_02235730.1| hypothetical protein DORFOR_02622 [Dorea formicigenerans ATCC
27755]
gi|166027258|gb|EDR46015.1| hypothetical protein DORFOR_02622 [Dorea formicigenerans ATCC
27755]
Length = 239
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
++ + + + FY + ++W+K +NL + ++ ++H DSL + +++ + + ID+
Sbjct: 19 LTDKQVSQFIKFYEMLVEWNKVMNLTGITEYDEVVMKHFVDSLSIVKVNGFDNVTTIIDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA-- 135
G+G GFPGI I I+ + L++S NK+ FL V+ + + R ++
Sbjct: 79 GTGAGFPGIPLKIVFPEIK---ITLLDSLNKRIKFLNAVIDELELENIETIHGRAEDFSK 135
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
D+ +RA+A+L TL EY P++
Sbjct: 136 KEDYREQYDLCVSRAVANLATLSEYCLPYVK 166
>gi|313111485|ref|ZP_07797286.1| glucose inhibited division protein B [Pseudomonas aeruginosa 39016]
gi|310883788|gb|EFQ42382.1| glucose inhibited division protein B [Pseudomonas aeruginosa 39016]
Length = 214
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++
Sbjct: 83 GGGMPGVPLAILFPQKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVEAFRP-E 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|296105466|ref|YP_003615612.1| 16S rRNA methyltransferase GidB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059925|gb|ADF64663.1| 16S rRNA methyltransferase GidB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 207
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL+ +++ +L + + KW+K NL S + IRH+ DS+ V
Sbjct: 1 MLNKLSRLLDQAGISLTDHQKNQLVAYVDMLNKWNKAYNLTSVRDPNEMLIRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLNGERFIDVGTGPGLPGIPLSIVRPE---SHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A L+ ++ +
Sbjct: 117 ITPVQSRVEEFPAEPPFDGVISRAFASLNDMVSWCKHL 154
>gi|307133312|ref|YP_003885328.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Dickeya
dadantii 3937]
gi|306530841|gb|ADN00772.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Dickeya
dadantii 3937]
Length = 206
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 6/164 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + +S ++L + L KW+K NL S E +RH+ DS V
Sbjct: 1 MLDTLNSLLQRAGIALSDRQKDQLLQYVALLHKWNKAYNLTSVREPEQMLVRHIMDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ H S +ID+G+G G PG+ +I L++S K+ FLR V +
Sbjct: 60 VEPHLAGSRFIDVGTGPGLPGVPLAIARPD---AHFVLLDSLGKRVRFLRQVQHELNLGN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ R+++ P D + +RA A L ++ + +++
Sbjct: 117 IEPVQSRVEDFPA-EPPFDGVISRAFASLQDMVNWCHHLPSRQQ 159
>gi|291529195|emb|CBK94781.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale M104/1]
Length = 237
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDL 78
++ LE+ E +Y + ++ +K +NL + + ++ +H DSL + ID+
Sbjct: 19 LNNSQLEQFELYYDMLIEKNKVMNLTAITDFDEVIEKHFLDSLFLCHTLDLNAEKNIIDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA-- 135
G+G GFPGI I ++ + L++S NK+ FL V++ + + R ++
Sbjct: 79 GTGAGFPGIPLKIAFPQLK---ITLLDSLNKRVGFLNEVIEALELKDIEAVHGRAEDFAR 135
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ +RA+A+L TL EY P++
Sbjct: 136 DKEHRAAYDICVSRAVANLSTLSEYCLPFVK 166
>gi|217978727|ref|YP_002362874.1| methyltransferase GidB [Methylocella silvestris BL2]
gi|217504103|gb|ACK51512.1| methyltransferase GidB [Methylocella silvestris BL2]
Length = 219
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ TL +L + L KW INLV+ ST++D WIRH DSL+V P W+DLGS
Sbjct: 25 LPDVTLRRLALYEALLRKWQGSINLVAKSTLDDIWIRHFVDSLQVSAAAPQARRWVDLGS 84
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQMI 139
GGGFPG++T+I+ + ++LIES +K +FLR V ++T A V RI++ +
Sbjct: 85 GGGFPGLVTAIRYADDPSAEIHLIESDQRKCAFLRTVSRETGAHAIVHCGRIEDIAAALD 144
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D +SARALA LL Y+ +L +
Sbjct: 145 APFDAVSARALAPFSQLLHYAERFLEK 171
>gi|269140866|ref|YP_003297567.1| glucose-inhibited cell division protein B
(S-adenosylmethionine-dependent methyltransferase)
[Edwardsiella tarda EIB202]
gi|267986527|gb|ACY86356.1| glucose-inhibited cell division protein B
(S-adenosylmethionine-dependent methyltransferase)
[Edwardsiella tarda EIB202]
gi|304560624|gb|ADM43288.1| Ribosomal RNA small subunit methyltransferase G [Edwardsiella tarda
FL6-60]
Length = 206
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N L +++ + ++L + L KW+K NL S D +RH+ DS+ V
Sbjct: 1 MNKQLDTLLAQAGISLTDQQKQRLLGYVSLLDKWNKAYNLTSVRDPRDMLVRHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPYLQGQRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELHLDN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L ++ +
Sbjct: 117 IEPVQSRVEAFVAEPPFDGVISRAFASLQDMVSWCHHL 154
>gi|327458814|gb|EGF05162.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1057]
Length = 237
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+ ++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 10 LVQQGIELNDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDN 69
Query: 74 IW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + +
Sbjct: 70 QELKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|270264086|ref|ZP_06192353.1| ribosomal RNA small subunit methyltransferase G [Serratia odorifera
4Rx13]
gi|270041735|gb|EFA14832.1| ribosomal RNA small subunit methyltransferase G [Serratia odorifera
4Rx13]
Length = 206
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + + ++L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MQKKLDSLLSAAGIALPDQQKQQLLGYVGMLDKWNKAYNLTSVRDPQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLQGSRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELGLTN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E P D + +RA A L +L + +
Sbjct: 117 IEPVQSRVEEFPA-EPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|238795164|ref|ZP_04638753.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
intermedia ATCC 29909]
gi|238725522|gb|EEQ17087.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
intermedia ATCC 29909]
Length = 206
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ + LLN + + +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLKKLDSLLNTAGIVLPDQQKLQLIGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI +I + L++S K+ FLR V +
Sbjct: 60 VNPYLQGDRFIDVGTGPGLPGIPLAIVRPT---AHFTLLDSLGKRVRFLRQVQHELGLNN 116
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R+++ D + +RA A L +L + +
Sbjct: 117 IEPVQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|255102892|ref|ZP_05331869.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-63q42]
Length = 239
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 6 SNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N+I + +N+ + LEK + + + + W+KK+NL ++ +I+H DS+
Sbjct: 1 MNNIELLKNGIEGFNIDTNDSMLEKFKIYREILVDWNKKMNLTGIEDEKEVYIKHFLDSI 60
Query: 64 RV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
ID+G+G GFPGI I L S+E + L++S NK+ +FL V +
Sbjct: 61 SAVKNGYIKNGMSIIDVGTGAGFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVL 117
Query: 122 AA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ DV +ARA+A L L+E+ P++
Sbjct: 118 ELDNITFIHGRAEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVK 165
>gi|331104702|ref|ZP_04590132.2| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024530|gb|EGI04586.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 214
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ E+L + L +KW+K NL + ++ RH+ DSL V + W+D
Sbjct: 21 GIELTQSQHEQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFIE-GTRWMD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V+L++S KK F V + E Q
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VSLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAENYQ 136
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 137 PDAPFDGIISRAFSSLEDFAGWTRHM 162
>gi|260595794|ref|YP_003208365.1| 16S rRNA methyltransferase GidB [Cronobacter turicensis z3032]
gi|260214971|emb|CBA26598.1| Ribosomal RNA small subunit methyltransferase G [Cronobacter
turicensis z3032]
Length = 207
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +L + + KW+K NL S + +RH+ DS+ V + H S +ID
Sbjct: 13 GITLPEHQKAQLVAYVDMLNKWNKAYNLTSVRDPNEMLVRHIMDSI-VVEPHLKGSRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI SI L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLSIVRPD---SHFTLLDSLGKRVRFLRQVQHELKLDNIAPVQSRVEAFP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L ++ +
Sbjct: 129 AEPPFDGVISRAFASLSDMVNWCHHL 154
>gi|209696453|ref|YP_002264384.1| 16S rRNA methyltransferase GidB [Aliivibrio salmonicida LFI1238]
gi|208010407|emb|CAQ80753.1| methyltransferase GidB (glucose inhibited division protein B)
[Aliivibrio salmonicida LFI1238]
Length = 209
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 4/164 (2%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D + VS E+L + L KW+K NL S + I+H+ DS
Sbjct: 1 MTDLSQQFDRLIAQTDLTVSELQKEQLLGYVALLHKWNKAYNLTSVRNPSEMVIKHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ V + +ID+G+G G PGI +I L++S K+ F++ V+ +
Sbjct: 61 I-VVSPNLSGERFIDVGTGPGLPGIPLAIMNPEK---SFTLLDSLGKRIRFIKQVIHELK 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A + ++ + +
Sbjct: 117 ITNVTPIQSRVEDFQPEEKFDAVLSRAFASMTDMVNWCHHLPKE 160
>gi|332074619|gb|EGI85093.1| methyltransferase GidB [Streptococcus pneumoniae GA17545]
Length = 254
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ P+ I
Sbjct: 14 NLPLSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIK 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A + L E + P+L
Sbjct: 131 DFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|270293003|ref|ZP_06199214.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
gi|270278982|gb|EFA24828.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
Length = 245
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 12 ETFYSLLAEQNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPIL 71
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 72 QGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLD 128
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+++ARA+A + L E + P+L
Sbjct: 129 GVHFYHGRAEDFAQDKNFRAHFDMVTARAVARMQILSELTIPYLK 173
>gi|255657631|ref|ZP_05403040.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-23m63]
gi|296452688|ref|ZP_06894379.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296880060|ref|ZP_06904029.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
gi|296258470|gb|EFH05374.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296428927|gb|EFH14805.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
Length = 239
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 6 SNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N++ + +N+ + LEK + + + + W+KK+NL ++ +I+H DS+
Sbjct: 1 MNNMELLKNGIEGFNIDTNDSMLEKFKIYREILIDWNKKMNLTGIEDEKEVYIKHFLDSI 60
Query: 64 RV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
ID+G+G GFPGI I L +E + L++S NK+ +FL V +
Sbjct: 61 SAVKNGYIKNGMSIIDVGTGAGFPGIPLKICLDRLE---LTLLDSLNKRINFLEEVSRVL 117
Query: 122 AA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
K R ++ DV +ARA+A L L+E+ P++
Sbjct: 118 ELDNIKFIHGRAEDFGKNENYREKYDVATARAVAGLPILMEFCVPFVK 165
>gi|49078966|gb|AAT49839.1| PA5564 [synthetic construct]
Length = 215
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++
Sbjct: 83 GGGMPGVPLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVEAFRP-E 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|116053715|ref|YP_794042.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa UCBPP-PA14]
gi|122256265|sp|Q02DE4|RSMG_PSEAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115588936|gb|ABJ14951.1| glucose inhibited division protein B [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 214
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++
Sbjct: 83 GGGMPGVPLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVEAFRP-E 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|15600757|ref|NP_254251.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa PAO1]
gi|107104665|ref|ZP_01368583.1| hypothetical protein PaerPA_01005744 [Pseudomonas aeruginosa PACS2]
gi|218894667|ref|YP_002443537.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa LESB58]
gi|254243109|ref|ZP_04936431.1| glucose inhibited division protein B [Pseudomonas aeruginosa 2192]
gi|296392431|ref|ZP_06881906.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa PAb1]
gi|20177903|sp|Q9HT10|RSMG_PSEAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725362|sp|B7V7A1|RSMG_PSEA8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|9951905|gb|AAG08949.1|AE004968_3 glucose inhibited division protein B [Pseudomonas aeruginosa PAO1]
gi|126196487|gb|EAZ60550.1| glucose inhibited division protein B [Pseudomonas aeruginosa 2192]
gi|218774896|emb|CAW30714.1| glucose inhibited division protein B [Pseudomonas aeruginosa
LESB58]
Length = 214
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++
Sbjct: 83 GGGMPGVPLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVEAFRP-E 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|291615572|ref|YP_003518314.1| GidB [Pantoea ananatis LMG 20103]
gi|291150602|gb|ADD75186.1| GidB [Pantoea ananatis LMG 20103]
Length = 208
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S + ++L + L KW+K NL S + +RH+ DS+ V H S +ID
Sbjct: 13 KISLSDQQKQQLVAYVGLLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVAPHLQGSRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I + L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVMPE---AHFTLLDSLGKRVRFLRQVQHELGLTNIEPVQSRVEAFP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLEDMVSWCHHL 154
>gi|167036427|ref|YP_001671658.1| 16S rRNA methyltransferase GidB [Pseudomonas putida GB-1]
gi|189040710|sp|B0KRB8|RSMG_PSEPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166862915|gb|ABZ01323.1| methyltransferase GidB [Pseudomonas putida GB-1]
Length = 216
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLG 79
+S E EKL + L +KW+K NL + ++ RH+ DSL V +H W+D+G
Sbjct: 24 LSAEHHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFIHNERDNWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGG PGI +I V ++++ KK FL V + EA Q
Sbjct: 84 SGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELKLDNLTVIHSRVEAFQPA 140
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
D I +RA + ++ ++
Sbjct: 141 QPFDGIISRAFSSMENFTNWTRHL 164
>gi|187925873|ref|YP_001897515.1| 16S rRNA methyltransferase GidB [Burkholderia phytofirmans PsJN]
gi|187717067|gb|ACD18291.1| methyltransferase GidB [Burkholderia phytofirmans PsJN]
Length = 227
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 9/156 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
++S L+KL + L KW+ NL + I+H+ DSL + PS
Sbjct: 25 GLDLSDAQLDKLLDYVALLSKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLAPLGPSSV 84
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+GSGGG PGI+ +I LS V + + +KK +F + V R++
Sbjct: 85 LDVGSGGGLPGIVLAIVLSEW---TVTVNDIVHKKTAFQAQAKAELGLANLSVVTGRVET 141
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWLYQK 167
DVI +RA A+L + + + ++
Sbjct: 142 LQPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|125717463|ref|YP_001034596.1| 16S rRNA methyltransferase GidB [Streptococcus sanguinis SK36]
gi|166224624|sp|A3CLJ1|RSMG_STRSV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125497380|gb|ABN44046.1| Methyltransferase gidB, putative [Streptococcus sanguinis SK36]
Length = 237
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 10 LAQQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDN 69
Query: 74 IW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + +
Sbjct: 70 QELKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFAQDKAFRAQFDLVTARAVARMQILSELTIPYLK 165
>gi|86747516|ref|YP_484012.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris HaA2]
gi|123004743|sp|Q2J359|RSMG_RHOP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86570544|gb|ABD05101.1| methyltransferase GidB [Rhodopseudomonas palustris HaA2]
Length = 237
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 59/147 (40%), Positives = 84/147 (57%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L+ + L W K NLV+ ST+ W RHV DSL++ L P W+D GS
Sbjct: 27 VSRETETRLDAYLDLLRLWQAKTNLVAPSTLPQLWTRHVADSLQLLALAPTARRWLDFGS 86
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+ + ++ +GG V L+E KKA+FLR ++ T A G V I +
Sbjct: 87 GGGFPGIVLACAMAEHDGGHVTLVERNAKKAAFLREALRVTGAPGTVMLADIGDNVDRFP 146
Query: 141 TC-DVISARALADLDTLLEYSFPWLYQ 166
D I+ARA+A L L+ ++ P + +
Sbjct: 147 RALDCITARAVAPLHQLIGFAAPLMTE 173
>gi|82779068|ref|YP_405417.1| 16S rRNA methyltransferase GidB [Shigella dysenteriae Sd197]
gi|309784451|ref|ZP_07679090.1| methyltransferase GidB [Shigella dysenteriae 1617]
gi|123561166|sp|Q329S9|RSMG_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81243216|gb|ABB63926.1| GldB [Shigella dysenteriae Sd197]
gi|308927958|gb|EFP73426.1| methyltransferase GidB [Shigella dysenteriae 1617]
Length = 207
Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 9/159 (5%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL ++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSLLLKDAGIPLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|54310652|ref|YP_131672.1| 16S rRNA methyltransferase GidB [Photobacterium profundum SS9]
gi|55976423|sp|Q6LLF8|RSMG_PHOPR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46915095|emb|CAG21870.1| Putative glucose inhibited division protein B [Photobacterium
profundum SS9]
Length = 206
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L V+ + +++L + L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MKQRLVQLIAQTELQVTEQQVQQLVGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 60 VSAHLQGENFIDVGTGPGLPGIPLAIMCPEKN---FTLLDSLGKRIRFIKQVVHELKIAN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A ++ ++ +
Sbjct: 117 VTPVQSRVEEFQPEQGFDGVISRAFASMNDMVSWCHHL 154
>gi|167759569|ref|ZP_02431696.1| hypothetical protein CLOSCI_01926 [Clostridium scindens ATCC 35704]
gi|167662796|gb|EDS06926.1| hypothetical protein CLOSCI_01926 [Clostridium scindens ATCC 35704]
Length = 237
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L ++ ++ + FY L ++W+K +NL + + +H DSL +
Sbjct: 1 MEHLLEEKLEKLGIQINEIQRKQFDDFYQLLVEWNKVMNLTGITEYGEVVEKHFVDSLSL 60
Query: 66 FQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + ID+G+G GFPGI I + + L++S NK+ FL V+++
Sbjct: 61 VEVLDLENVNHVIDVGTGAGFPGIPLKIAFPHLR---ITLLDSLNKRIKFLDTVIKELGL 117
Query: 124 R-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+ +RA+A+L TL EY P++
Sbjct: 118 KDIHTIHGRAEDYARQAEYREKYDLCVSRAVANLATLSEYCLPYIR 163
>gi|188535591|ref|YP_001909388.1| 16S rRNA methyltransferase GidB [Erwinia tasmaniensis Et1/99]
gi|238689684|sp|B2VCB2|RSMG_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188030633|emb|CAO98529.1| Methyltransferase GidB (Glucose-inhibited division protein B)
[Erwinia tasmaniensis Et1/99]
Length = 205
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S ++L + + KW+K NL S + +RH+ DS+ V + H +ID
Sbjct: 13 GISLSDRQKQQLVGYVEMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLIGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PG+ +I L++S K+ FL+ V + E
Sbjct: 72 VGTGPGLPGVPLAIVRPG---AHFTLLDSLGKRVRFLKQVQHELKLDNITPVQSRVEEFA 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 GEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|168234384|ref|ZP_02659442.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194469918|ref|ZP_03075902.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194456282|gb|EDX45121.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205331682|gb|EDZ18446.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 207
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|168263228|ref|ZP_02685201.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205348134|gb|EDZ34765.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 207
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPD---AYFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|268593522|ref|ZP_06127743.1| 16S rRNA methyltransferase GidB [Providencia rettgeri DSM 1131]
gi|291310946|gb|EFE51399.1| 16S rRNA methyltransferase GidB [Providencia rettgeri DSM 1131]
Length = 206
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 6 SNSILRANYLL--NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ + + N LL +++ + ++L + L KW+K NL S + IRH+ DS+
Sbjct: 1 MDLLSKLNQLLVKTDIDLTEKQKQQLVDYVGLLAKWNKAYNLTSVRDPQQMLIRHIMDSI 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V + +ID+G+G G PG+ +I L++S K+ FL+ V +
Sbjct: 61 -VVNGQLNGTKFIDVGTGPGLPGVPLAIVRPD---SHFVLLDSLGKRIRFLKQVQHELGL 116
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E ++ D + +RA A L+ +L +
Sbjct: 117 TNIEPVQSRVEEYRIENGFDGVISRAFASLNDMLGWCHHL 156
>gi|300925570|ref|ZP_07141443.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 182-1]
gi|301324959|ref|ZP_07218514.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 78-1]
gi|300418344|gb|EFK01655.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 182-1]
gi|300848130|gb|EFK75890.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 78-1]
Length = 215
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 8 SILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++L LL +++ +L + + KW+K NL S + +RH+ DS+
Sbjct: 8 TVLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI- 66
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
V + +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 67 VVAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLE 123
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 124 NIEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 162
>gi|294638359|ref|ZP_06716612.1| 16S rRNA methyltransferase GidB [Edwardsiella tarda ATCC 23685]
gi|291088612|gb|EFE21173.1| 16S rRNA methyltransferase GidB [Edwardsiella tarda ATCC 23685]
Length = 206
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L +++ + ++L + L KW+K NL S + +RH+ DS+ V
Sbjct: 1 MHKQLDTLLAQAGISLTDQQKQQLLAYVELLDKWNKAYNLTSVRDPREMLVRHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI +I L++S K+ FLR V
Sbjct: 60 VSPHLQGQRFIDVGTGPGLPGIPLAIVRPE---SHFTLLDSLGKRVRFLRQVQHALQLNN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E+ D + +RA A L +L +
Sbjct: 117 IEPVQSRVESFVAEPPFDGVISRAFASLQDMLAWCHHL 154
>gi|300940926|ref|ZP_07155452.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 21-1]
gi|300454356|gb|EFK17849.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 21-1]
Length = 207
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLTSLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|329116883|ref|ZP_08245600.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
gi|326907288|gb|EGE54202.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
Length = 237
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWID 77
++ ++ + + ++W++KINL + + +++ +++H DS+ + P +D
Sbjct: 17 LTDYQKDQFKTYLETLIEWNQKINLTAITDLDEVYLKHFYDSIAPILQGHITNQPIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA- 135
+G+G GFP I I ++ V +I+S NK+ +FL + K + R ++
Sbjct: 77 IGAGAGFPSIPMKIICPELD---VTIIDSLNKRINFLNLLADKLNLTNVHFYHGRAEDFG 133
Query: 136 --PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
D+++ARA+A + L E + P+L K
Sbjct: 134 QDKNFRGQFDIVTARAVARMQVLSELTIPFLRIK 167
>gi|325265451|ref|ZP_08132174.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
gi|324029309|gb|EGB90601.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
Length = 237
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + +Y L +W+K +NL + ++ +H DSL +
Sbjct: 1 MENKFENQLKELNIQLDEKQKQQFQRYYELLTEWNKVMNLTGITDYDEVNEKHFVDSLSI 60
Query: 66 FQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPG+ I + V L++S NK+ FL V+++
Sbjct: 61 VKAVDIENIKTVIDIGTGAGFPGLPLKIVYPQL---HVVLLDSLNKRVKFLNTVIEELKL 117
Query: 124 -RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+ +RA+A+L TL EY P++
Sbjct: 118 DDIETLHGRAEDYARQTNYREQFDLCVSRAVANLSTLSEYCLPYIR 163
>gi|90413744|ref|ZP_01221732.1| glucose-inhibited division protein B [Photobacterium profundum
3TCK]
gi|90325213|gb|EAS41710.1| glucose-inhibited division protein B [Photobacterium profundum
3TCK]
Length = 206
Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L V+ + +++L + L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MKQRLVQLIAQTELQVTEQQVQQLVGYVELLHKWNKAYNLTSVRDPHEMLVKHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 60 VSAHLQGENFIDVGTGPGLPGIPLAIMCPEKN---FTLLDSLGKRIRFIKQVVHELNIAN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A ++ ++ +
Sbjct: 117 VTPVQSRVEEFQPEQGFDGVISRAFASMNDMVSWCHHL 154
>gi|323342285|ref|ZP_08082517.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463397|gb|EFY08591.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 238
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 6 SNSI-LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + VS E ++ + L + +K +NL E +++H DSL
Sbjct: 1 MNFLEFISKIEALGIVVSEEMKQQFLTYKNLIQEVNKVLNLTGIDDDEGIFLKHFYDSLL 60
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ L S D+GSG GFPGI+ +I V IE K+ +FL VVQ+ +
Sbjct: 61 ISPLIKENSSIADIGSGAGFPGIVLAIARPD---VTVTCIEPTTKRTNFLERVVQECGLK 117
Query: 125 GKVFACRIQE--APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ E ++ + DV +ARA+A LD L E P++
Sbjct: 118 NTIVLNGRAEDVIGELRESFDVATARAVAYLDILSELCLPFVK 160
>gi|303240049|ref|ZP_07326570.1| methyltransferase GidB [Acetivibrio cellulolyticus CD2]
gi|302592318|gb|EFL62045.1| methyltransferase GidB [Acetivibrio cellulolyticus CD2]
Length = 242
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 12 ANYLL---NTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N L+ N +N ++ E EK + + +W++KINL + D I+H DSL +
Sbjct: 9 KNLLIAGANEFNIPLNEEQAEKFFKYKNVLKEWNEKINLTAIEDDRDIIIKHFIDSLSIL 68
Query: 67 Q-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ ID+G+G GFPGI I E V L++S +K+ FL V+++ G
Sbjct: 69 PLIKGDNIKLIDVGTGAGFPGIPVKIAR---ESIEVTLLDSLDKRVKFLNEVIKEDGLTG 125
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
K R +E P+ D+ +ARA+A L L+EY P++
Sbjct: 126 IKALHGRAEEKAVLPEFREKYDICTARAVASLPVLIEYCLPFVK 169
>gi|170724366|ref|YP_001752054.1| 16S rRNA methyltransferase GidB [Pseudomonas putida W619]
gi|193806450|sp|B1JFV1|RSMG_PSEPW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169762369|gb|ACA75685.1| methyltransferase GidB [Pseudomonas putida W619]
Length = 216
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLG 79
+S E E+L + L +KW+K NL + ++ RH+ DSL V +HP W+D+G
Sbjct: 24 LSAEQHERLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMGFIHPDRDSWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGG PGI +I V ++++ KK FL V + EA Q
Sbjct: 84 SGGGMPGIPLAILHPQKR---VTVLDANGKKTRFLTQVKMELKLDNLTVIHSRVEAFQPA 140
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ I +RA + ++ ++
Sbjct: 141 QPFNGIISRAFSSMENFTNWTRHL 164
>gi|254237762|ref|ZP_04931085.1| glucose inhibited division protein B [Pseudomonas aeruginosa C3719]
gi|126169693|gb|EAZ55204.1| glucose inhibited division protein B [Pseudomonas aeruginosa C3719]
Length = 214
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGGNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++
Sbjct: 83 GGGMPGVPLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVEAFRP-E 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|329900650|ref|ZP_08272542.1| Ribosomal RNA small subunit methyltransferase G [Oxalobacteraceae
bacterium IMCC9480]
gi|327549426|gb|EGF33990.1| Ribosomal RNA small subunit methyltransferase G [Oxalobacteraceae
bacterium IMCC9480]
Length = 221
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
TLE+L + L KW+ NL + + +H+ D+L + + +D+G+GGG
Sbjct: 29 TLERLIDYVALLAKWNTVYNLTAIRDPQQMVTQHLLDTLAILPAFLHVKHVLDVGAGGGL 88
Query: 85 PGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG++ +I ++++++ +KK +FL V + EA ++ D
Sbjct: 89 PGMVLAIWAQQANPALRISMVDTVHKKTAFLTQVKVELGLTNVTVHTGRVEALKVTQLFD 148
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
VI++RA A+L + +S L +
Sbjct: 149 VITSRAFAELLDFVNWSGHLLAE 171
>gi|254788515|ref|YP_003075944.1| 16S rRNA m7G527 methyltransferase [Teredinibacter turnerae T7901]
gi|237686626|gb|ACR13890.1| 16S rRNA m7G527 methyltransferase [Teredinibacter turnerae T7901]
Length = 211
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
S + +L + LF+KW+K NL + ++ +H+ DSL V + +ID+G+
Sbjct: 19 FSDDQRVRLGAYLELFIKWNKTYNLSAIRDPQEMVSKHLLDSLSVAEH-LTGERFIDVGT 77
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGG PGI +I L++S KK FL V Q R E+ +
Sbjct: 78 GGGLPGIPLAITFPE---RHFTLLDSAGKKTRFLFQVKQALGLHNVQVENRRVESFEPDE 134
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D + +RA A L + +Y L
Sbjct: 135 LYDGVISRAFASLQDMTDYCHHLLKP 160
>gi|225386362|ref|ZP_03756126.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
gi|225047544|gb|EEG57790.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
Length = 243
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
++ ++ LE+ +Y L ++ +K +NL + + +D +H DSL + +L
Sbjct: 9 MKREAGELGIALNGGQLEQFFRYYELLVERNKVMNLTAITEEQDVVTKHFTDSLSLVKLM 68
Query: 70 ----PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR- 124
+D+G+G GFPGI I + V L++S NK+ FL V ++ +
Sbjct: 69 GAEAFAGKTLMDVGTGAGFPGIPLKIAFPELN---VTLLDSLNKRVRFLMDVCEELGLKD 125
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+ +RA+A+L +L EY P++
Sbjct: 126 ITAVHGRAEDFGRNLQYREQFDLCVSRAVANLASLSEYCMPFVK 169
>gi|260685216|ref|YP_003216501.1| 16S rRNA methyltransferase GidB [Clostridium difficile CD196]
gi|260688875|ref|YP_003220009.1| 16S rRNA methyltransferase GidB [Clostridium difficile R20291]
gi|260211379|emb|CBA67032.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile CD196]
gi|260214892|emb|CBE07696.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile R20291]
Length = 242
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 7 NSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L N + +N+ + LEK + + + ++W+KK+NL ++ +I+H DS+
Sbjct: 6 NIELLKNGI-EGFNIDTNDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDSIS 64
Query: 65 V--FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
ID+G+G GFPGI I L S+E + L++S NK+ +FL V +
Sbjct: 65 AVKNGYIKNGMSIIDVGTGAGFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVLE 121
Query: 123 A-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ DV +ARA+A L L+E+ P++
Sbjct: 122 LDNITFIHGRAEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVK 168
>gi|323352787|ref|ZP_08087757.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
gi|322121823|gb|EFX93569.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
Length = 237
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 10 LAQQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDN 69
Query: 74 IW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + +
Sbjct: 70 QELKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELSLDKVHFYH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|304438031|ref|ZP_07397975.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368985|gb|EFM22666.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 240
Score = 107 bits (267), Expect = 6e-22, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
IL A ++ E + + ++ + L W+ ++NL + + ED ++H+ DSL +
Sbjct: 5 EEILAARAAEAGIPLTAEQIGQFSVYHEMLLDWNTRMNLTALTAPEDVVVKHIIDSLMAY 64
Query: 67 Q--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
ID+G+G G PGI ++ + V L++S NK+ FL V
Sbjct: 65 DAARFDGARTLIDVGTGAGLPGIPLAVYAPHL---TVTLLDSLNKRVRFLTEVTAAMGLQ 121
Query: 124 RGKVFA---CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ +RA+A L LLEY+ P++
Sbjct: 122 NVRCIHARAEEAARTAEHRAAYDIAVSRAVARLPVLLEYTLPFVR 166
>gi|28379586|ref|NP_786478.1| glucose-inhibited division protein B [Lactobacillus plantarum
WCFS1]
gi|38257501|sp|Q88T09|RSMG_LACPL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28272426|emb|CAD65350.1| cell division protein GidB [Lactobacillus plantarum WCFS1]
Length = 244
Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + ++ + L + ++ L + +K+ NL + + + +++H DSL
Sbjct: 1 MNPEEFKQALAQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLT 60
Query: 65 VFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP I I ++ V +++S NK+ +FL +VQ+
Sbjct: 61 PAFYVPALRDQPLTICDVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQ 117
Query: 121 TAAR-GKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
K F R + + D+ +ARA+A L L E P +
Sbjct: 118 LGLTGVKTFHDRAETFAGKKSAHRESYDIATARAVARLSVLSELCLPLVK 167
>gi|51598259|ref|YP_072450.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis IP
32953]
gi|108810164|ref|YP_654080.1| 16S rRNA methyltransferase GidB [Yersinia pestis Antiqua]
gi|108814146|ref|YP_649913.1| 16S rRNA methyltransferase GidB [Yersinia pestis Nepal516]
gi|145601144|ref|YP_001165220.1| 16S rRNA methyltransferase GidB [Yersinia pestis Pestoides F]
gi|150260937|ref|ZP_01917665.1| glucose inhibited division protein B [Yersinia pestis CA88-4125]
gi|153947796|ref|YP_001403126.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis IP
31758]
gi|162419517|ref|YP_001608480.1| 16S rRNA methyltransferase GidB [Yersinia pestis Angola]
gi|165926220|ref|ZP_02222052.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939988|ref|ZP_02228525.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009598|ref|ZP_02230496.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213356|ref|ZP_02239391.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401525|ref|ZP_02307019.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422855|ref|ZP_02314608.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425517|ref|ZP_02317270.1| methyltransferase GidB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167468639|ref|ZP_02333343.1| glucose-inhibited division protein B [Yersinia pestis FV-1]
gi|186897460|ref|YP_001874572.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis PB1/+]
gi|218931105|ref|YP_002348980.1| 16S rRNA methyltransferase GidB [Yersinia pestis CO92]
gi|229839839|ref|ZP_04459998.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229841923|ref|ZP_04462079.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229896800|ref|ZP_04511963.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Pestoides A]
gi|229904689|ref|ZP_04519800.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Nepal516]
gi|270488399|ref|ZP_06205473.1| 16S rRNA methyltransferase GidB [Yersinia pestis KIM D27]
gi|294505651|ref|YP_003569713.1| glucose-inhibited division protein B [Yersinia pestis Z176003]
gi|20177890|sp|Q8Z9R9|RSMG_YERPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81638065|sp|Q663Q0|RSMG_YERPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122979241|sp|Q1C087|RSMG_YERPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122979846|sp|Q1CCG7|RSMG_YERPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224630|sp|A4TSI5|RSMG_YERPP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166989557|sp|A7FPE8|RSMG_YERP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238687313|sp|A9R5U7|RSMG_YERPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691429|sp|B2K7J3|RSMG_YERPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51591541|emb|CAH23213.1| glucose inhibited division protein B [Yersinia pseudotuberculosis
IP 32953]
gi|108777794|gb|ABG20313.1| glucose inhibited division protein B [Yersinia pestis Nepal516]
gi|108782077|gb|ABG16135.1| glucose inhibited division protein B [Yersinia pestis Antiqua]
gi|115349716|emb|CAL22697.1| glucose inhibited division protein B [Yersinia pestis CO92]
gi|145212840|gb|ABP42247.1| glucose inhibited division protein B [Yersinia pestis Pestoides F]
gi|149290345|gb|EDM40422.1| glucose inhibited division protein B [Yersinia pestis CA88-4125]
gi|152959291|gb|ABS46752.1| methyltransferase GidB [Yersinia pseudotuberculosis IP 31758]
gi|162352332|gb|ABX86280.1| methyltransferase GidB [Yersinia pestis Angola]
gi|165912114|gb|EDR30754.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922080|gb|EDR39257.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991520|gb|EDR43821.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205654|gb|EDR50134.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958247|gb|EDR55268.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048907|gb|EDR60315.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055531|gb|EDR65324.1| methyltransferase GidB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186700486|gb|ACC91115.1| methyltransferase GidB [Yersinia pseudotuberculosis PB1/+]
gi|229678807|gb|EEO74912.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Nepal516]
gi|229691262|gb|EEO83315.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229696205|gb|EEO86252.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229700238|gb|EEO88274.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Pestoides A]
gi|262363816|gb|ACY60537.1| glucose-inhibited division protein B [Yersinia pestis D106004]
gi|270336903|gb|EFA47680.1| 16S rRNA methyltransferase GidB [Yersinia pestis KIM D27]
gi|294356110|gb|ADE66451.1| glucose-inhibited division protein B [Yersinia pestis Z176003]
gi|320017464|gb|ADW01036.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 206
Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 7/161 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ + LL + + +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLKKLDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLQGSRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELGLNN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA D + +RA A L +L + +
Sbjct: 117 IEPVQSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|241895296|ref|ZP_04782592.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
gi|241871602|gb|EER75353.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
Length = 239
Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SLRVF 66
N +L+ + L + + +Y + ++ +NL + + +D +++H D +
Sbjct: 12 DKNVILD-----DKQLAQYQTYYDRLVSVNEHMNLTAITDRDDVYLKHFYDSLTLAWAYP 66
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+L ID+G+G GFP + I ++ + +I++ NK+ FL+ +V +
Sbjct: 67 KLQTDQLRMIDVGAGAGFPSLPLKIAFPQLK---ITIIDALNKRIKFLQELVTELGLEDV 123
Query: 126 KVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
V R +E DV +ARALA L+ L E + P +
Sbjct: 124 TVVHARAEEFGHKKAPNREQFDVATARALARLNVLGELTLPLVK 167
>gi|269103812|ref|ZP_06156509.1| ribosomal RNA small subunit methyltransferase G [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268163710|gb|EEZ42206.1| ribosomal RNA small subunit methyltransferase G [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 206
Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L V+ + L++L + L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MKQRLAQLISQTDLQVTEQQLDQLVGYVELLNKWNKAYNLTSVRDPNEMLVKHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI +I L++S K+ F+R V+ +
Sbjct: 60 VSEYLKGDHYIDVGTGPGLPGIPLAIMCPEK---SFTLLDSLGKRIRFIRQVIFELKITN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A + ++ +
Sbjct: 117 VTPVQSRVEEFQPEEGFDGVLSRAFASMTDMVTWCHHL 154
>gi|219849945|ref|YP_002464378.1| 16S rRNA methyltransferase GidB [Chloroflexus aggregans DSM 9485]
gi|254766886|sp|B8G6Y3|RSMG_CHLAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219544204|gb|ACL25942.1| methyltransferase GidB [Chloroflexus aggregans DSM 9485]
Length = 238
Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSIWI 76
+S + + + + W+ + NL + RH+ DS P+ I
Sbjct: 17 GIPLSEHQYAQFQRYLDELIIWNDRFNLTAIRDRSAMIRRHLLDSLYLARDWQTAPANLI 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSG GFP + I ++ V L+E+ KKA FLR+V++ +V RI+
Sbjct: 77 DIGSGAGFPALPLKIAYPTLP---VTLVEATGKKAEFLRHVIECLELTDVRVLHERIETV 133
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ +V++ARA+A+L L+EY+ P L
Sbjct: 134 GRNLAEREQYEVVTARAVAELRVLVEYALPLLR 166
>gi|319936584|ref|ZP_08010998.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
gi|319808382|gb|EFW04942.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
Length = 234
Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N N L ++S L++ E +Y ++W++K+NL + + ED +++H DSL
Sbjct: 1 MNIEQFINALHDKGISLSDYQLKQFEIYYNTLVEWNEKMNLTAITQKEDVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + D+G+G GFP I I ++ +V+ + + ++L V++
Sbjct: 61 ISFDFDFNNQTLCDIGAGAGFPSIPLKIVYPDLKITIVDSLTKRITFLNYLTQVLKLN-- 118
Query: 124 RGKVFACRIQEAP-QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ T D+++ARA+A L+ L E P +
Sbjct: 119 NVTAVSARAEDYAIGHRETFDIVTARAVARLNILDELCLPLVR 161
>gi|210624044|ref|ZP_03294161.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
gi|210153251|gb|EEA84257.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
Length = 241
Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 7 NSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N L N + + +TL++ + L +W++K+NL + +I+H DS+
Sbjct: 5 NRELLKNGIEDFGLTADDKTLDRFRMYRELLAEWNRKMNLTGIDDEKGTYIKHFLDSVSA 64
Query: 66 FQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPG+ + L + + V L++S NK+ +FL+ V +
Sbjct: 65 VKGGYIKDGMSIIDVGTGAGFPGVPLKVCLENTK---VTLLDSLNKRINFLQEVCNQLEL 121
Query: 124 -RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P DV +ARA+A L L+E+ P++
Sbjct: 122 EDVEFIHGRAEDFGKNPDYREQYDVATARAVAGLPILMEFCVPFIK 167
>gi|323496916|ref|ZP_08101944.1| 16S rRNA methyltransferase GidB [Vibrio sinaloensis DSM 21326]
gi|323317990|gb|EGA70973.1| 16S rRNA methyltransferase GidB [Vibrio sinaloensis DSM 21326]
Length = 210
Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A +VS + E L + + KW+K NL S +D ++H+ DS+ + H
Sbjct: 8 LDALIAQTDLDVSDKQRELLVGYVAMLDKWNKAYNLTSVRDPQDMLVKHILDSI-IVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I E L++S K+ F++ + +
Sbjct: 67 LQGERFIDVGTGPGLPGIPLAIMCPDKEFF---LLDSLGKRIRFIKQALHELKIENVTPI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A + ++ + Q
Sbjct: 124 QSRVEEFQPEEKFDAVLSRAFASMVDMVNWCHHLPKQ 160
>gi|332361813|gb|EGJ39617.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1056]
Length = 237
Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 12 QQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQE 71
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 72 LKLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEEIGLDKVHFYHGR 128
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 129 AEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|304392707|ref|ZP_07374647.1| 16S rRNA methyltransferase GidB [Ahrensia sp. R2A130]
gi|303295337|gb|EFL89697.1| 16S rRNA methyltransferase GidB [Ahrensia sp. R2A130]
Length = 212
Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VSRET E+L+ ++ L +KW K+INLVS ST+ D W RH DS+++ L + +D G
Sbjct: 13 GVSRETAERLQVYHDLLVKWQKQINLVSPSTIPDAWQRHFLDSMQIAPLITGGTSLVDFG 72
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-----RGKVFACRIQE 134
SG GFPG++ +I V+L+ES KKA+FLR V++ V R++
Sbjct: 73 SGAGFPGLVLAIMNVDGPLTNVHLVESNGKKAAFLRAVLRDIGLAKTGMTVTVHNERVEV 132
Query: 135 APQMITTCDVISARALADLDTLLEYSFPW 163
+ D I+ARAL+ L LL S P
Sbjct: 133 VSTTMPAPDWITARALSSLSELLTMSAPL 161
>gi|322835094|ref|YP_004215121.1| methyltransferase GidB [Rahnella sp. Y9602]
gi|321170295|gb|ADW75994.1| methyltransferase GidB [Rahnella sp. Y9602]
Length = 206
Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + + ++L + L KW+K NL S +RH+ DS+ V
Sbjct: 1 MQKKLDSLLAAAGIALPDQQKQQLIGYVELLHKWNKAYNLTSVRDPMQMLVRHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNEHLQGSRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELGLKN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E D + +RA A L +L +
Sbjct: 117 IEPVQSRVEEFEPDPL-FDGVISRAFASLQDMLSWCHHL 154
>gi|262282118|ref|ZP_06059887.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
gi|262262572|gb|EEY81269.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
Length = 237
Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 12 QQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQE 71
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 72 LKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEEIGLDKVHFYHGR 128
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 129 AEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|85712597|ref|ZP_01043644.1| glucose-inhibited division protein B [Idiomarina baltica OS145]
gi|85693588|gb|EAQ31539.1| glucose-inhibited division protein B [Idiomarina baltica OS145]
Length = 215
Score = 107 bits (266), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 5/147 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS E + KL L KW+K NL S + +H+ DS V H +ID+G+
Sbjct: 22 VSDEQVVKLVQLVELLDKWNKAYNLTSVRDPNEMLTKHIIDS-LVVMPHLKGEQFIDVGT 80
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
G G PG+ +I + L++S K+ F+R V + R++ +
Sbjct: 81 GPGLPGLPLAICMP---HCEFVLLDSLGKRIRFIRQVCHELNIENVTAVQSRVEAYDSRL 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D + +RA A L+ +L +
Sbjct: 138 HDFDGVLSRAFASLNDMLSWCHHLPKP 164
>gi|291541855|emb|CBL14965.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus bromii L2-63]
Length = 237
Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
+ E L++ E ++ L ++W++K+NL + + ++H DSL ++ ID
Sbjct: 17 KLDDEMLQRFEIYFKLLVEWNEKMNLTAITDEHGVAVKHFADSLTLYNFVDVKKNASIID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--- 134
+G+G GFPG++ I I+ + L++S NK+ +FL V+ T ++ R +E
Sbjct: 77 VGTGAGFPGVVLKIARPDIK---LTLLDSLNKRLTFLDTVLNDTGLDSELVHSRAEEGGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
D+ +RA+A L+ L EY P++
Sbjct: 134 NKLYREKFDIAVSRAVARLNVLCEYCLPYVK 164
>gi|227511970|ref|ZP_03942019.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
gi|227084778|gb|EEI20090.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
Length = 244
Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N N LL V+ + L + + ++ L ++ ++ +NL + + + +++H DS+
Sbjct: 1 MNIDQFINALLEQNIQVTDDQLGQFDAYFKLLVRTNEHVNLTTITEKSEVYLKHFYDSIT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFP I I ++ + +++S NK+ +FL +VQ+
Sbjct: 61 PAFFVSQIREQPVSLCDVGAGAGFPSIPLKILFPQLK---ITIVDSLNKRINFLTELVQQ 117
Query: 121 TAAR-GKVFACRIQEAPQM----ITTCDVISARALADLDTLLEYSFPWLY 165
+ + R +E + D+++ARA+A L L E P +
Sbjct: 118 LNLKDVTLAHARAEEFGNKKSVSRQSFDIVTARAVARLGVLSELCLPLVR 167
>gi|315178651|gb|ADT85565.1| glucose-inhibited division protein B [Vibrio furnissii NCTC 11218]
Length = 211
Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 6 SNSI---LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
NS+ L A +VS E+L + L KW+K NL S D ++H+ DS
Sbjct: 1 MNSLRVKLDALIAQTDLDVSERQCEQLVGYVELLNKWNKAYNLTSVRDTSDMLVKHIMDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ V +ID+G+G G PGI +I + L++S K+ F++ V+ +
Sbjct: 61 I-VVSPLLVGERFIDVGTGPGLPGIPLAIMNPTK---SFVLLDSLGKRIRFIKQVLHELN 116
Query: 123 A-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D + +RA A + ++E+
Sbjct: 117 ITNVTPVQSRVEEFDGGEDGFDGVLSRAFASITDMVEWCHHL 158
>gi|332998036|gb|EGK17641.1| methyltransferase GidB [Shigella flexneri K-272]
gi|333013714|gb|EGK33079.1| methyltransferase GidB [Shigella flexneri K-227]
Length = 207
Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHQL 154
>gi|270290031|ref|ZP_06196257.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
gi|270281568|gb|EFA27400.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
Length = 243
Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPSIWI 76
VS + + + +Y ++ ++ +NL + + ++ +++H DS+ Q
Sbjct: 17 VSDHQMWQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTPGIALC 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ-- 133
D+G+G GFP + I L ++ V +++S NK+ FL+ +V + ++ R +
Sbjct: 77 DVGAGAGFPSLPMKILLPELK---VTIVDSLNKRIKFLQALVDELGLTDVELVHDRAETF 133
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + +++ARA+A L L E P + Q
Sbjct: 134 GAKKSAYRASFALVTARAVARLSVLSELCLPLVKQ 168
>gi|24380281|ref|NP_722236.1| 16S rRNA methyltransferase GidB [Streptococcus mutans UA159]
gi|20177893|sp|Q93D95|RSMG_STRMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|15625438|gb|AAL04086.1|AF397166_11 GidB [Streptococcus mutans]
gi|24378293|gb|AAN59542.1|AE015017_8 putative glucose-inhibited division protein [Streptococcus mutans
UA159]
Length = 237
Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-- 65
+ N+S + E+ + ++ L ++W+ KINL + + ++ +++H DS+
Sbjct: 4 EEFYQALAKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIAPLL 63
Query: 66 -FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ +D+G+G GFP + I ++ V +I+S NK+ FL +
Sbjct: 64 SGYIPNESLKLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRIKFLNLLADALELD 120
Query: 124 RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R + + D+++ARA+A L L E + P+L
Sbjct: 121 KVHFYHGRAEVFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLK 165
>gi|22128011|ref|NP_671434.1| 16S rRNA methyltransferase GidB [Yersinia pestis KIM 10]
gi|45443759|ref|NP_995298.1| 16S rRNA methyltransferase GidB [Yersinia pestis biovar Microtus
str. 91001]
gi|21961159|gb|AAM87685.1|AE014015_10 glucose-inhibited division protein [Yersinia pestis KIM 10]
gi|45438629|gb|AAS64175.1| glucose inhibited division protein B [Yersinia pestis biovar
Microtus str. 91001]
Length = 223
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + + +L + L KW+K NL S + +RH+ DS+ V H
Sbjct: 22 LDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPH 80
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 81 LQGSRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELGLNNIEPV 137
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA D + +RA A L +L + +
Sbjct: 138 QSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHLPAK 174
>gi|331092104|ref|ZP_08340935.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402305|gb|EGG81876.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
Length = 237
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ I ++ E+ FY + ++W+ +NL + E+ +H DS+ +
Sbjct: 1 MSKIFEEKLAHLGIVLNDTQKEQFHQFYEILVEWNSFMNLTGITEYEEVNEKHFVDSVSL 60
Query: 66 FQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPGI I +E + L++S NK+ FL V+++
Sbjct: 61 IKAVDLSKVKTVIDVGTGAGFPGIPLKIAFPHLE---IVLLDSLNKRVKFLNEVIEQLGL 117
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
G + R ++ + D+ +RA+A+L TL EY P++
Sbjct: 118 TGIRAIHGRAEDYAKQKEYREQFDLCVSRAVANLSTLSEYCIPYV 162
>gi|227113931|ref|ZP_03827587.1| glucose-inhibited division protein B [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 206
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 13 NYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
N L N N +S + L + + KW+K NL S + +RH+ DS+ V +
Sbjct: 3 NTLDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLVRHIMDSI-VVE 61
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
H + +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 62 PHLHGQRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELQLENIT 118
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L ++ +
Sbjct: 119 PVQSRVEAFPAEPPFDGVISRAFASLQDMISWCSHL 154
>gi|213427462|ref|ZP_03360212.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 216
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|220930842|ref|YP_002507751.1| methyltransferase GidB [Clostridium cellulolyticum H10]
gi|220001170|gb|ACL77771.1| methyltransferase GidB [Clostridium cellulolyticum H10]
Length = 241
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLG 79
++ +++ E + L +W+KKINL + + I+H DS+ + + ID+G
Sbjct: 22 ITDIQIKQFEKYMELLKEWNKKINLTAIEDDREIVIKHFIDSISIVPYVKNENLKIIDIG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA---P 136
+G GFPGI I + L++ ++ + K + + + T R ++ P
Sbjct: 82 TGAGFPGIPLKIVNPQNKVTLLDSLDKRVKFLNEVINGINITQISA--IHGRAEDFGTNP 139
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLY 165
D+ ARA+A+L LLEY P++
Sbjct: 140 VYREKYDIAVARAVANLPVLLEYCLPFVK 168
>gi|291531939|emb|CBK97524.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum 70/3]
Length = 232
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + + +S++ +KL Y +++++ +NL + + E+ ++H DS+ F
Sbjct: 5 EFIISEFQKCNIELSQDKADKLLKLYEFLVEYNQNVNLTAITDFEEVVVKHFIDSVLPFS 64
Query: 68 LHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G GFP I I ++ L+E+ NK+ FL + T
Sbjct: 65 MIDIKENSSFIDVGTGAGFPSIPLMIVRPDLK---GTLLEALNKRCVFLEKACELTGVDA 121
Query: 126 KVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
KV R ++ + D +ARA+A + L EY P++
Sbjct: 122 KVVHGRAEDYAKEKREAFDFATARAVAAMPVLCEYCIPYVK 162
>gi|291285164|ref|YP_003501982.1| Ribosomal RNA small subunit methyltransferase G [Escherichia coli
O55:H7 str. CB9615]
gi|290765037|gb|ADD58998.1| Ribosomal RNA small subunit methyltransferase G [Escherichia coli
O55:H7 str. CB9615]
Length = 207
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 9/159 (5%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +++ +L + + KW+K N S + +RH+ DS+ V
Sbjct: 1 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNPTSVRDPNEMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 60 VAPYLQGERFIDVGTGPGLPGIPLSIVRPE---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ ++ +
Sbjct: 117 IEPVQSRVEEFPS-EPPFDGVISRAFASLNDMVSWCHHL 154
>gi|298489531|ref|ZP_07007540.1| Methyltransferase gidB [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298155958|gb|EFH97069.1| Methyltransferase gidB [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 211
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S KK F V + E Q
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAENYQ 133
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 134 PDAPFDGIISRAFSSLEDFTGWTRHM 159
>gi|332995870|gb|AEF05925.1| glucose-inhibited division protein B [Alteromonas sp. SN2]
Length = 214
Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 5/159 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL + + +S + KL F L KW+K NL S + ++H+ DSL ++
Sbjct: 9 EILASGLAAQSLQLSDDQQAKLVGFVLLIDKWNKAYNLTSVRDPKQMMVKHILDSLAIYP 68
Query: 68 L--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G G PG+ +I L++S K+ F+ V
Sbjct: 69 YLAKHEAKHIIDVGTGPGLPGMPLAIAFPDT---AFTLLDSLGKRVRFMTQCVHTLKLSN 125
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
EA D++ +RA A L +L + +
Sbjct: 126 VTPVQSRVEAHTPAQPYDIVLSRAFASLKDMLHWCQHLV 164
>gi|81427630|ref|YP_394627.1| glucose-inhibited division protein B [Lactobacillus sakei subsp.
sakei 23K]
gi|123564972|sp|Q38ZR1|RSMG_LACSS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78609269|emb|CAI54316.1| Methyltransferase GidB (Glucose Inhibited Cell Division protein B)
[Lactobacillus sakei subsp. sakei 23K]
Length = 246
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYP 72
+ +VS++ L++ E ++ + ++ +NL + + E +++H DS+ P
Sbjct: 13 HQIDVSQKQLDQFEIYFERLVATNQNVNLTAITEKEAVYLKHFFDSVAPTLYLESLRTMP 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP + I ++ V +++S NK+ FL +V + + R
Sbjct: 73 LNICDIGAGAGFPSLPMKILFPQLK---VTIVDSLNKRIHFLEELVAELGLTDVTLVHDR 129
Query: 132 IQ----EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+++ARA+A ++ L E+ P +
Sbjct: 130 AELFSQVKRPYREQFDMVTARAVAPMNVLAEFCLPAVK 167
>gi|260771037|ref|ZP_05879965.1| ribosomal RNA small subunit methyltransferase G [Vibrio furnissii
CIP 102972]
gi|260613926|gb|EEX39117.1| ribosomal RNA small subunit methyltransferase G [Vibrio furnissii
CIP 102972]
Length = 211
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 6 SNSI---LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
NS+ L A +VS E+L + L KW+K NL S D ++H+ DS
Sbjct: 1 MNSLRVKLDALIAQTDLDVSERQREQLVGYVELLNKWNKAYNLTSVRDTSDMLVKHIMDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ V +ID+G+G G PGI +I + L++S K+ F++ V+ +
Sbjct: 61 I-VVSPLLVGERFIDVGTGPGLPGIPLAIMNPTK---SFVLLDSLGKRIRFIKQVLHELN 116
Query: 123 A-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D + +RA A + ++E+
Sbjct: 117 ITNVTPVQSRVEEFDGGEDGFDGVLSRAFASITDMVEWCHHL 158
>gi|271502657|ref|YP_003335683.1| methyltransferase GidB [Dickeya dadantii Ech586]
gi|270346212|gb|ACZ78977.1| methyltransferase GidB [Dickeya dadantii Ech586]
Length = 206
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ + +L + L KW+K NL S E +RH+ DS V + H + +ID+G+
Sbjct: 16 LTDQQKNQLLQYVALLHKWNKAYNLTSVREPEQMLVRHIMDS-LVVEPHLCGNRFIDVGT 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
G G PG+ +I L++S K+ FLR V + + R+++ P
Sbjct: 75 GPGLPGVPLAIARPD---AHFVLLDSLGKRVRFLRQVQHELGLSNIEPVQSRVEDFPA-E 130
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
D + +RA A L ++ +
Sbjct: 131 PPFDGVISRAFASLQDMVNWCHHL 154
>gi|319946423|ref|ZP_08020660.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
gi|319747391|gb|EFV99647.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
Length = 237
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+ ++ E+ E ++ L ++W++KINL + + ++ +++H DS+ + I
Sbjct: 14 GFPLTNRQKEQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIAPILQGLIENKPIR 73
Query: 77 --DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ +FL + ++ + R +
Sbjct: 74 LLDIGAGAGFPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFAQDKVFRAQFDLVTARAVARMQVLSELTIPFLK 165
>gi|296114341|ref|ZP_06832995.1| putative methyltransferase gidB (glucose-inhibited divisio protein
B) [Gluconacetobacter hansenii ATCC 23769]
gi|295979102|gb|EFG85826.1| putative methyltransferase gidB (glucose-inhibited divisio protein
B) [Gluconacetobacter hansenii ATCC 23769]
Length = 214
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET ++L + L ++W+ +INLVS + W RH+ DSL++ L P + +D+G
Sbjct: 15 DVSRETRDRLTAYADLLVRWNARINLVSRPDLAQLWPRHIADSLQLAALIPQGARVVDMG 74
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG++ ++ V LIES +KA+FLR + R +V +
Sbjct: 75 SGGGFPGLVIAMA----TDAHVTLIESDQRKAAFLREASRVAGVRTRV--IAARIEAAEA 128
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D+++ARALA L LL++ +L ++
Sbjct: 129 GPADIVTARALAPLPQLLQWGVRFLDKE 156
>gi|238917973|ref|YP_002931490.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
gi|238873333|gb|ACR73043.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
Length = 240
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N + N ++ E+ + +Y L ++W+ +NL + ++ ++H DSL +
Sbjct: 3 NETFKNNLNSIGVELTDRQYEQFDMYYKLLVEWNSFMNLTGITDYDEVLLKHYVDSLVLD 62
Query: 67 Q----LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
ID+G+G GFPG+ I + V L++S NK+ FL V++
Sbjct: 63 IEKIGHGKKEISLIDVGTGAGFPGLPLKIAYPQLN---VVLLDSLNKRVKFLNQVIEDLG 119
Query: 123 ARG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
G + R ++ + DV +RA+A+L TL+EY+ P++
Sbjct: 120 LTGIETVHSRAEDGGRNKDLREHFDVSVSRAVANLATLVEYNLPFVK 166
>gi|254291138|ref|ZP_04961935.1| hypothetical protein A33_0021 [Vibrio cholerae AM-19226]
gi|150422983|gb|EDN14933.1| hypothetical protein A33_0021 [Vibrio cholerae AM-19226]
Length = 210
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + + KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQMLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ FL+ V+ + + E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHELKINNVLPVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV+ +RA A + ++ +
Sbjct: 132 PESGFDVVLSRAFASMTDMVNWCQHLPKP 160
>gi|300721122|ref|YP_003710390.1| glucose-inhibited division protein [Xenorhabdus nematophila ATCC
19061]
gi|297627607|emb|CBJ88126.1| glucose-inhibited division protein, contains
S-adenosyl-L-methionine-dependent methyltransferase
domain [Xenorhabdus nematophila ATCC 19061]
Length = 206
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S+E ++L + + KW+K NL S E +RH+ DS+ V
Sbjct: 5 LESLLAKTDIALSQEQKQQLVAYVEMLNKWNKAYNLTSVRDPEQMLVRHIMDSI-VVNPF 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ + +ID+G+G G PG+ +I + L++S K+ FLR V +
Sbjct: 64 LHGTRFIDVGTGPGLPGVPLAIVR---QDSHFTLLDSLGKRVRFLRQVQHELGLTNIDPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E D + +RA A L +L +
Sbjct: 121 QSRVEEFIP-EPPFDGVISRAFASLQDMLSWCRHLPKP 157
>gi|302877166|ref|YP_003845799.1| methyltransferase GidB [Clostridium cellulovorans 743B]
gi|307687865|ref|ZP_07630311.1| 16S rRNA methyltransferase GidB [Clostridium cellulovorans 743B]
gi|302580023|gb|ADL54035.1| methyltransferase GidB [Clostridium cellulovorans 743B]
Length = 239
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I++ + + + L +W++KINL + + E+ +H DS+++F+
Sbjct: 5 EIMKKSAENEGLMFDEIKYNQFIKYKNLLKEWNEKINLTAITEDEEIIKKHFIDSIKIFR 64
Query: 68 LHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P + ID+G+G GFPG+ I I+ V L++S NK+ +FL V+ +
Sbjct: 65 FSPLSKMNNIIDVGTGAGFPGLPIKIVNPDIK---VTLLDSLNKRVNFLNTVISELGINN 121
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E + D +RA+A+L L E P++
Sbjct: 122 IDAIHGRAEEFSRKEEHRGQFDGAVSRAVANLTVLSELCIPYVKN 166
>gi|323492999|ref|ZP_08098135.1| 16S rRNA methyltransferase GidB [Vibrio brasiliensis LMG 20546]
gi|323312735|gb|EGA65863.1| 16S rRNA methyltransferase GidB [Vibrio brasiliensis LMG 20546]
Length = 210
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + VS + +L + + KW+K NL S ++ ++H+ DS+ V H
Sbjct: 8 LDALIAQTSLEVSDQQRSQLVGYVEMLDKWNKAYNLTSVRDPQEMLVKHIMDSI-VVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI SI + L++S K+ F++ V+ +
Sbjct: 67 LQGESFIDVGTGPGLPGIPLSIMNPDKQ---FVLLDSLGKRIRFIKQVLHELKIENVTPV 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A + ++E+
Sbjct: 124 QSRVEEYLPEDKFDAVLSRAFASMTDMVEWCHHL 157
>gi|91785744|ref|YP_560950.1| glucose inhibited division protein [Burkholderia xenovorans LB400]
gi|123062449|sp|Q13SP1|RSMG_BURXL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91689698|gb|ABE32898.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia xenovorans
LB400]
Length = 227
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
+S L KL + L KW+ NL + I+H+ DSL + PS
Sbjct: 25 GLALSDAQLGKLLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLAPLGPSSV 84
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+GSGGG PGI+ +I L V + + +KK +F + V R++
Sbjct: 85 LDVGSGGGLPGIVLAIVLPEW---TVTVNDIVHKKTAFQAQGKAELGLANLSVVTGRVES 141
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWLYQK 167
DVI +RA A+L + + + ++
Sbjct: 142 LQPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|295678143|ref|YP_003606667.1| methyltransferase GidB [Burkholderia sp. CCGE1002]
gi|295437986|gb|ADG17156.1| methyltransferase GidB [Burkholderia sp. CCGE1002]
Length = 227
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 9/156 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
+S KL + L KW+ NL + ++H+ DS+ + PS
Sbjct: 25 GLELSDAQQRKLLDYVALLAKWNNVYNLTAIRDPRQMLVQHILDSVSIVPHLAPRGPSSV 84
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+GSGGG PGI+ +I L V + +KK +F + V R++
Sbjct: 85 LDVGSGGGMPGIVLAIVLPDW---TVTTNDIVHKKTAFQSQAKAELGLANLSVVTGRVET 141
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWLYQK 167
DVI +RA A+L + + + ++
Sbjct: 142 LQPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|313890867|ref|ZP_07824491.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
gi|313120765|gb|EFR43880.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
Length = 237
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ Y + ++ ++ + ++ + ++W++KINL + + D +++H DS+ + P
Sbjct: 13 SGYELKQKQKDQFDTYFKVLIEWNQKINLTAITEKNDVYLKHFYDSIAPILQGYIPNQPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL ++ Q+ G F R
Sbjct: 73 QLLDIGAGAGFPSLPMKIIFPQLQ---VTIIDSLNKRITFLAHLTQELDLDGVTFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q + D+++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKGFRSKYDLVTARAVARMQILSELTIPFLK 165
>gi|116334626|ref|YP_796153.1| glucose-inhibited division protein B [Lactobacillus brevis ATCC
367]
gi|122268695|sp|Q03NV0|RSMG_LACBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116099973|gb|ABJ65122.1| Cell division SAM-dependent methyltransferase [Lactobacillus brevis
ATCC 367]
Length = 242
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 13/170 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N RA +++ ++ +Y + ++ +NL + + D +++H DSL
Sbjct: 1 MNPEEFRAALAAQGIDLTATQEQQFADYYQFLVATNEHVNLTTITAEPDVYLKHFYDSLT 60
Query: 65 VFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P D+G+G GFP + I ++ V +++S NK+ +FL + K
Sbjct: 61 PAFYVSALRTEPLTLCDVGAGAGFPSLPLKIVFPQLQ---VTIVDSLNKRITFLNELAAK 117
Query: 121 TAARGKVFACRIQE-----APQMITTCDVISARALADLDTLLEYSFPWLY 165
G F E D+++ARA+A + L E P +
Sbjct: 118 LNLTGVAFHHARAEEFGGKRAANREGFDLVTARAVARMSVLSELCLPLVK 167
>gi|291558324|emb|CBL35441.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum V10Sc8a]
Length = 232
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + + +S++ +KL Y ++++K +NL + + E+ ++H DS+ F
Sbjct: 5 EFIISEFQKCNIKLSQDKADKLLKLYEFLVEYNKNVNLTAITDFEEVVVKHFIDSVLPFS 64
Query: 68 LHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G GFP I I ++ L+E+ NK+ FL + T
Sbjct: 65 MIDIKENSSFIDVGTGAGFPSIPLMIVRPDLK---GTLLEALNKRCVFLEKACELTEVDA 121
Query: 126 KVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
KV R ++ + D +ARA+A + L EY P++
Sbjct: 122 KVIHGRAEDYAKEKREAFDFATARAVAAMPVLCEYCIPYVK 162
>gi|227354886|ref|ZP_03839301.1| methyltransferase (glucose-inhibited division protein B) [Proteus
mirabilis ATCC 29906]
gi|227165039|gb|EEI49875.1| methyltransferase (glucose-inhibited division protein B) [Proteus
mirabilis ATCC 29906]
Length = 208
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D + L+ ++ +KL + + KW+K NL S + IRH+ DS
Sbjct: 1 MSDLLNRLKKLAKQANIELTDVQAQKLTAYVAMLDKWNKAYNLTSVRDPQQMLIRHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ V + + +ID+G+G G PGI +I L++S K+ F++ V + A
Sbjct: 61 I-VVSQYLEGNNFIDVGTGPGLPGIPLAIMRPD---HHFVLLDSLGKRVRFMKQVQHELA 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E Q+ D + +RA A + +L + + ++
Sbjct: 117 LHNIEPVQYRVEEYQVEKPFDGVISRAFASMKDMLSWCSHLVTEE 161
>gi|150019905|ref|YP_001312159.1| 16S rRNA methyltransferase GidB [Clostridium beijerinckii NCIMB
8052]
gi|189039494|sp|A6M3M3|RSMG_CLOB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149906370|gb|ABR37203.1| methyltransferase GidB [Clostridium beijerinckii NCIMB 8052]
Length = 239
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MK+ D ++ + +S+E EK + L +W++KINL + E+ +H
Sbjct: 1 MKFYD---LMSKSAEDVGLQLSKEQYEKFIDYMKLLQEWNEKINLTAIIDDEEIIKKHFI 57
Query: 61 DSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS++ F+ + ID+G+G GFPG+ +I + + V L++S NK+ SFL V+
Sbjct: 58 DSIKAFKRDEFKIASSLIDVGTGAGFPGLPIAIMRADLN---VTLLDSLNKRVSFLNTVI 114
Query: 119 QKTAA-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ A R ++ ++ D+ ++RA+A++ L E P++
Sbjct: 115 NRIGASNVTTIHSRAEDGAKDIKLRENFDIATSRAVANMSVLSELCLPYVK 165
>gi|27364444|ref|NP_759972.1| 16S rRNA methyltransferase GidB [Vibrio vulnificus CMCP6]
gi|37681445|ref|NP_936054.1| glucose-inhibited division protein B [Vibrio vulnificus YJ016]
gi|320154848|ref|YP_004187227.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Vibrio vulnificus MO6-24/O]
gi|29336648|sp|Q8DDH8|RSMG_VIBVU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976474|sp|Q7MGH0|RSMG_VIBVY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27360563|gb|AAO09499.1| methyltransferase GidB [Vibrio vulnificus CMCP6]
gi|37200197|dbj|BAC96025.1| glucose inhibited division protein B [Vibrio vulnificus YJ016]
gi|319930160|gb|ADV85024.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Vibrio vulnificus MO6-24/O]
Length = 211
Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A V+ E+L + L KW+K NL S +D ++H+ DS+ V H
Sbjct: 8 LDALIEQTDLQVNERQREQLLGYVELLNKWNKAYNLTSVRDPQDMLVKHILDSI-VVAPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F++ V+ +
Sbjct: 67 LDGERFIDVGTGPGLPGIPLAIMHPEK---TFFLLDSLGKRIRFIKQVLHELKIENVTTV 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A + ++E+
Sbjct: 124 QSRVEEFQPEEKFDGVLSRAFASMTDMVEWCHHL 157
>gi|239631036|ref|ZP_04674067.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301065357|ref|YP_003787380.1| cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
gi|239527319|gb|EEQ66320.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300437764|gb|ADK17530.1| Cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
Length = 243
Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL + +L
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQV 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 MSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQ----EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + Q + D+++ARA+A LD L E P + +
Sbjct: 130 AETFGAKKSQHRASFDLVTARAVAALDVLAELCLPLVKPQ 169
>gi|161505601|ref|YP_001572713.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|189040820|sp|A9MJR0|RSMG_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160866948|gb|ABX23571.1| hypothetical protein SARI_03777 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 207
Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 7/158 (4%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + LL+ +++ L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLNKLSRLLDEAGISLTDHQKNHLVAYVGMLDKWNKAYNLTSVRDPAEMIVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI +I L L++S K+ FLR V +
Sbjct: 60 VAPYLQGQRFIDVGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLEN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L ++ +
Sbjct: 117 ITPVQSRVEAYPSEPPFDGVISRAFASLSDMVSWCRHL 154
>gi|227327864|ref|ZP_03831888.1| glucose-inhibited division protein B [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 206
Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 9/156 (5%)
Query: 13 NYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
N L N N +S + L + + KW+K NL S + +RH+ DS+ V +
Sbjct: 3 NTLDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLVRHIMDSI-VVE 61
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 62 PHLDGQRFIDVGTGPGLPGIPLAIVRPE---SHFTLLDSLGKRVRFLRQVQHELQLENIT 118
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A L ++ +
Sbjct: 119 PVQSRVEEFPAEPPFDGVISRAFASLQDMISWCSHL 154
>gi|197286881|ref|YP_002152753.1| glucose-inhibited division protein B [Proteus mirabilis HI4320]
gi|194684368|emb|CAR46007.1| methyltransferase (glucose-inhibited division protein B) [Proteus
mirabilis HI4320]
Length = 208
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D + L+ ++ +KL + + KW+K NL S + IRH+ DS
Sbjct: 1 MSDLLNRLKKLAKQANIELTDVQAQKLTAYVAMLDKWNKAYNLTSVRDPQQMLIRHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ V + + +ID+G+G G PGI +I L++S K+ F++ V + A
Sbjct: 61 I-VVSQYLKGNNFIDVGTGPGLPGIPLAIMRPD---HHFVLLDSLGKRVRFMKQVQHELA 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E Q+ D + +RA A + +L + + ++
Sbjct: 117 LHNIEPVQYRVEEYQVEKPFDGVISRAFASMKDMLSWCSHLVTEE 161
>gi|218134366|ref|ZP_03463170.1| hypothetical protein BACPEC_02260 [Bacteroides pectinophilus ATCC
43243]
gi|217989751|gb|EEC55762.1| hypothetical protein BACPEC_02260 [Bacteroides pectinophilus ATCC
43243]
Length = 248
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 6 SNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ LN NV E L+ +Y L ++W+K +NL + + +D +++H DSL
Sbjct: 1 MEISMNFTDALNEINVELDDSMEEALQKYYELLVEWNKVMNLTAITEKDDVYVKHFLDSL 60
Query: 64 RVFQLHPYPSI------------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
V + ID+G+G GFPGI I S++ V L++S NK+
Sbjct: 61 AVKTVFDDKEYAKMLPDTNTAIKVIDIGTGAGFPGIPLKIAFPSVK---VTLLDSLNKRI 117
Query: 112 SFLRYVVQKTAAR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
FL V+ + R ++ P + D+ +RA+A L TL EY P++
Sbjct: 118 KFLNEVISTVGLNDIEAIHGRAEDYAREPDYRESYDLCVSRAVATLSTLAEYCLPYVK 175
>gi|167751434|ref|ZP_02423561.1| hypothetical protein EUBSIR_02430 [Eubacterium siraeum DSM 15702]
gi|167655680|gb|EDR99809.1| hypothetical protein EUBSIR_02430 [Eubacterium siraeum DSM 15702]
Length = 232
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + + +S++ +KL Y +++++ +NL + + E+ ++H DS+ F
Sbjct: 5 EFIISEFQKCNIELSQDKADKLLKLYEFLVEYNQNVNLTAITDFEEVVVKHFIDSVLPFS 64
Query: 68 LHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G GFP I I ++ L+E+ NK+ FL + T
Sbjct: 65 MIDIKENSSFIDVGTGAGFPSIPLMIVRPDLK---GTLLEALNKRCVFLEKACELTEVDA 121
Query: 126 KVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
KV R ++ + D +ARA+A + L EY P++
Sbjct: 122 KVIHGRAEDYAKEKREAFDFATARAVAAMPVLCEYCIPYVK 162
>gi|320539762|ref|ZP_08039423.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Serratia
symbiotica str. Tucson]
gi|320030165|gb|EFW12183.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Serratia
symbiotica str. Tucson]
Length = 206
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 6/159 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + + ++L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 MQKKLDSLLSAAGIELPEQQKQQLLGYIVMLEKWNKAYNLTSVRDAQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNSHLQGSRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELGLHN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E D + +RA A L +L +
Sbjct: 117 IEPVHSRVEEFMA-EPPFDGVISRAFASLQDMLSWCHHL 154
>gi|330987012|gb|EGH85115.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011894|gb|EGH91950.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 214
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 21 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S KK F V + E+ Q
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAESYQ 136
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 137 PEVPFDGIISRAFSSLEDFTGWTRHM 162
>gi|289677541|ref|ZP_06498431.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. syringae
FF5]
gi|320321680|gb|EFW77779.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331117|gb|EFW87088.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 211
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S KK F V + E+ Q
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAESYQ 133
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 134 PEVPFDGIISRAFSSLEDFTGWTRHM 159
>gi|257485606|ref|ZP_05639647.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 211
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S KK F V + E+ Q
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAESYQ 133
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 134 PEVPFDGIISRAFSSLEDFTGWTRHM 159
>gi|75674295|ref|YP_316716.1| glucose inhibited division protein [Nitrobacter winogradskyi
Nb-255]
gi|123614359|sp|Q3SWH7|RSMG_NITWN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|74419165|gb|ABA03364.1| Glucose inhibited division protein [Nitrobacter winogradskyi
Nb-255]
Length = 277
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS ET +L+ + L ++W K NLV+SST+ W RH+ DSL++ L P W DLGS
Sbjct: 70 VSSETEARLDAYVDLLVQWQTKTNLVASSTLPQLWTRHIADSLQLLALAPQAKCWADLGS 129
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ IEG V+L+E KKA+FLR V+ TA+ V I +
Sbjct: 130 GGGFPGVVLACALADIEGARVDLVERNAKKAAFLREAVRITASPASVHLMDIGDYVDRSE 189
Query: 141 -TCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L LL + P + +
Sbjct: 190 DRIDCVTARALAPLQVLLGFVEPLVNK 216
>gi|66048355|ref|YP_238196.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. syringae
B728a]
gi|75499949|sp|Q4ZL14|RSMG_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|63259062|gb|AAY40158.1| Glucose inhibited division protein [Pseudomonas syringae pv.
syringae B728a]
gi|330881915|gb|EGH16064.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330952341|gb|EGH52601.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae Cit 7]
gi|330970318|gb|EGH70384.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aceris
str. M302273PT]
gi|330976395|gb|EGH76452.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 214
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 21 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S KK F V + E+ Q
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAESYQ 136
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 137 PEVPFDGIISRAFSSLEDFTGWTRHM 162
>gi|266620966|ref|ZP_06113901.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
gi|288867388|gb|EFC99686.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
Length = 243
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SLRVFQLHPYPSIWIDLGS 80
+ + +Y L +W+K +NL + + ++ +H D + ++ ID+G+
Sbjct: 24 QINQFYQYYELLDEWNKVMNLTAITDQKEVITKHFVDSLALVKAMGEISTKEYKIIDIGT 83
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA---P 136
G GFPGI I ++ + L++S NK+ FL V+++ + R ++
Sbjct: 84 GAGFPGIPLKIAFPQLK---ITLMDSLNKRIKFLNEVIEQLGLKEITAVHSRAEDLGRDK 140
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
D+ +RA+A+L TL EY P++
Sbjct: 141 DYREQYDLSVSRAVANLSTLSEYCMPFVKP 170
>gi|90421813|ref|YP_530183.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris BisB18]
gi|122477631|sp|Q21CM2|RSMG_RHOPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|90103827|gb|ABD85864.1| methyltransferase GidB [Rhodopseudomonas palustris BisB18]
Length = 234
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L+ + L L+W K NL+S +T+ W RHV DSL++ +L P W+D GS
Sbjct: 27 VSRETEARLDAYVALLLQWQAKTNLISPATLPQLWTRHVADSLQLLRLAPDAKTWLDFGS 86
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPG++ + L+ GG V L+E KKA+FLR ++ T G+V I + +
Sbjct: 87 GGGFPGVVLACALAESAGGSVQLVERNVKKAAFLREALRVTGGAGQVILADIGDSVDRFA 146
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARA+A L L+ ++ P + Q
Sbjct: 147 GQVDCVTARAVAPLHQLIGFAKPLIRQ 173
>gi|224121638|ref|XP_002318633.1| predicted protein [Populus trichocarpa]
gi|222859306|gb|EEE96853.1| predicted protein [Populus trichocarpa]
Length = 288
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-----------FQLH 69
S +++ + L+W++K+NL + + V++ RH+EDSL +
Sbjct: 59 FSCRQKKQIRLYVDTLLQWNQKMNLTAVTDVDEVMERHIEDSLAILPPIQDSYVSHCNAS 118
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+G+G G PG++ +I + + V L+ES NK+ FL + + T +V
Sbjct: 119 IDSIKLVDVGTGAGLPGLVLAIACPAWK---VTLLESMNKRCDFLEHAISVTGLSNVEVV 175
Query: 129 ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R + Q DV ARA+A++ L EY P +
Sbjct: 176 RGRAENLGQNVSFREKFDVAVARAVAEMRILAEYCLPLVR 215
>gi|253690609|ref|YP_003019799.1| methyltransferase GidB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259495499|sp|C6DJG4|RSMG_PECCP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|251757187|gb|ACT15263.1| methyltransferase GidB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 206
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Query: 13 NYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
N L N N +S + L + + KW+K NL S + +RH+ DS+ V +
Sbjct: 3 NTLDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLVRHIMDSI-VVE 61
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
H + +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 62 PHLHGQRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELQLENIT 118
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A L ++ +
Sbjct: 119 PVQSRVEEFPAEPPFDGVISRAFASLHDMISWCNHL 154
>gi|110635798|ref|YP_676006.1| glucose-inhibited division protein B [Mesorhizobium sp. BNC1]
gi|123057421|sp|Q11CN4|RSMG_MESSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110286782|gb|ABG64841.1| methyltransferase GidB [Chelativorans sp. BNC1]
Length = 210
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/145 (40%), Positives = 83/145 (57%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET + L F F KWS +INL + ST+ W RH+ DS ++ ++ P W+DLGS
Sbjct: 16 VSRETFDGLVAFEGEFRKWSARINLTAPSTLPHLWERHILDSAQLIRIAPAARRWLDLGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG + +I + V+L+ES KKA+FL+ + A + RI++ I
Sbjct: 76 GGGFPGAVIAILMKEHAPAQVDLVESNRKKAAFLQTSLASLKAPCMIHPQRIEDCYGQIP 135
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
+VI+ARALA L L + PW+
Sbjct: 136 PPEVITARALAPLPVLFGLAEPWMK 160
>gi|315650202|ref|ZP_07903277.1| glucose inhibited division protein B [Eubacterium saburreum DSM
3986]
gi|315487559|gb|EFU77867.1| glucose inhibited division protein B [Eubacterium saburreum DSM
3986]
Length = 241
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
Y D + L + +L+T +S E EKL FY + ++ +K +NL S + + + +H DS
Sbjct: 2 YNDMDKYLSESNILDTV-LSDEKKEKLYRFYKILIEKNKVMNLTSITDIRECTYKHFIDS 60
Query: 63 LRV----FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ + + DLG+G GFPGI +I ++ ++LI+S NK+ F++ V
Sbjct: 61 IAIEKLVKDIGEREYSVADLGTGAGFPGIPLAIAFPNLR---LDLIDSLNKRVKFIQEVC 117
Query: 119 QKTAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R + + D+ +RA+A+L +L EY P +
Sbjct: 118 EALELKNVTSIHSRAENIAKDKKYREKFDICVSRAVANLASLSEYCLPLVK 168
>gi|89052692|ref|YP_508143.1| methyltransferase GidB [Jannaschia sp. CCS1]
gi|122499791|sp|Q28VZ4|RSMG_JANSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|88862241|gb|ABD53118.1| 16S rRNA m(7)G-527 methyltransferase [Jannaschia sp. CCS1]
Length = 211
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 6/164 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N ++L + VSRET+++LE ++ L +W K INL++ ST++ W+RH+ DS ++
Sbjct: 1 MNESDAKHWLSDR--VSRETMDRLELYHTLLTRWQKTINLIAPSTIDSVWVRHIMDSAQL 58
Query: 66 FQ-LHPYPSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAA 123
F W+DLGSGGGFPG++ + V L+ES +K FLR ++
Sbjct: 59 FDLASKPAHRWLDLGSGGGFPGLVVAAMAKDVCPNLTVTLVESDIRKCGFLREAARQMDL 118
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
K+ + RI + P T DVISARAL+ L L+ ++ P + K
Sbjct: 119 SVKILSRRIGDVP--AQTADVISARALSSLSNLIGHARPHMTPK 160
>gi|302185833|ref|ZP_07262506.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. syringae
642]
Length = 211
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVSFIE-GTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S KK F V + E+ Q
Sbjct: 77 VGSGGGMPGIPMAILFPQCQ---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAESYQ 133
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 134 PEVPFDGIISRAFSSLEDFTGWTRHM 159
>gi|212712653|ref|ZP_03320781.1| hypothetical protein PROVALCAL_03748 [Providencia alcalifaciens DSM
30120]
gi|212684869|gb|EEB44397.1| hypothetical protein PROVALCAL_03748 [Providencia alcalifaciens DSM
30120]
Length = 207
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 4/164 (2%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D S L ++ + ++L + L KW+K NL S E +RH+ DS+
Sbjct: 1 MDLLSKLTKLLAKADIQLTDKQKQQLVDYVGLLHKWNKAYNLTSVREPEQMLVRHIMDSI 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V H + +ID+G+G G PG+ +I L++S K+ FL+ V +
Sbjct: 61 -VVNGHLKGNKFIDVGTGPGLPGVPLAIVRPD---AHFVLLDSLGKRVRFLKQVQHELGL 116
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E D + +RA A L+ +L + ++
Sbjct: 117 TNIEPVQFRVEEYPANEGFDGVISRAFASLNDMLSWCHHLPAKE 160
>gi|15896963|ref|NP_350312.1| 16S rRNA methyltransferase GidB [Clostridium acetobutylicum ATCC
824]
gi|20177895|sp|Q97CW4|RSMG_CLOAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15026839|gb|AAK81652.1|AE007868_8 Glucose-inhibited division protein, GIDB
(S-adenosylmethionine-dependent methyltransferase)
[Clostridium acetobutylicum ATCC 824]
gi|325511140|gb|ADZ22776.1| glucose-inhibited division protein B [Clostridium acetobutylicum EA
2018]
Length = 239
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MKY D I+ + E K + L +W+K +NL S E+ +H
Sbjct: 1 MKYFD---IMSLECKKIGIEFTEEKYGKFMRYKELLQEWNKVMNLTSIVDDEEIVKKHFI 57
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS+++F+ ID+G+G GFPG+ +I IE V L++S K+ +FL V+
Sbjct: 58 DSIKIFECEHIVKAKRIIDVGTGAGFPGLPIAIMNDDIE---VVLLDSLQKRVNFLNEVI 114
Query: 119 QKTAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R ++ DV +RA+A++ L E+ P+
Sbjct: 115 KELNLKNISTVHGRAEDFGVDKDYREKFDVAVSRAVANMAVLSEFCLPFAR 165
>gi|327384225|gb|AEA55699.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BD-II]
Length = 243
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL + +L
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQV 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 MSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQ----EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + + D+++ARA+A LD L E P + +
Sbjct: 130 AETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQ 169
>gi|227534572|ref|ZP_03964621.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187821|gb|EEI67888.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 247
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL + +L
Sbjct: 17 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQV 76
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 77 MSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 133
Query: 132 IQ----EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + + D+++ARA+A LD L E P + +
Sbjct: 134 AETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQ 173
>gi|191637023|ref|YP_001986189.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BL23]
gi|190711325|emb|CAQ65331.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Lactobacillus casei BL23]
gi|327381050|gb|AEA52526.1| 16S rRNA methyltransferase GidB [Lactobacillus casei LC2W]
Length = 247
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL + +L
Sbjct: 17 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQV 76
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 77 MSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 133
Query: 132 IQ----EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + + D+++ARA+A LD L E P + +
Sbjct: 134 AETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQ 173
>gi|116493781|ref|YP_805515.1| 16S rRNA methyltransferase GidB [Lactobacillus casei ATCC 334]
gi|122264764|sp|Q03CJ9|RSMG_LACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103931|gb|ABJ69073.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus casei ATCC 334]
Length = 243
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL + +L
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQV 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 MSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQ----EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + + D+++ARA+A LD L E P + +
Sbjct: 130 AEAFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQ 169
>gi|330870068|gb|EGH04777.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 214
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L KW+K NL + ++ RH+ DSL V + WID
Sbjct: 21 GIDLSPAQHEQLLAYLALLTKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S KK F V + E Q
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAENYQ 136
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 137 PDAPFDGIISRAFSSLEDFTGWTRHM 162
>gi|289628221|ref|ZP_06461175.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289649111|ref|ZP_06480454.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 211
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLTKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S KK F V + E Q
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAENYQ 133
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 134 PDAPFDGIISRAFSSLEDFTGWTRHM 159
>gi|123444381|ref|YP_001008346.1| 16S rRNA methyltransferase GidB [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332163558|ref|YP_004300135.1| 16S rRNA methyltransferase GidB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|166224629|sp|A1JTD7|RSMG_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122091342|emb|CAL14228.1| glucose inhibited division protein B [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|318608065|emb|CBY29563.1| rrna small subunit methyltransferase, glucose inhibited division
protein GidB [Yersinia enterocolitica subsp. palearctica
Y11]
gi|325667788|gb|ADZ44432.1| 16S rRNA methyltransferase GidB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861788|emb|CBX71961.1| ribosomal RNA small subunit methyltransferase G [Yersinia
enterocolitica W22703]
Length = 206
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ + LL+ + + +L + L KW+K NL S +RH+ DS+ V
Sbjct: 1 MLKKLDSLLSAAGIELPDQQKHQLIGYVELLDKWNKAYNLTSVRDPMQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLQGSRFIDVGTGPGLPGIPLAIVRPD---AHFVLLDSLGKRVRFLRQVQHELGLSN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R+++ D + +RA A L +L + +
Sbjct: 117 IEPVQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|261250649|ref|ZP_05943224.1| ribosomal RNA small subunit methyltransferase G [Vibrio orientalis
CIP 102891]
gi|260939218|gb|EEX95205.1| ribosomal RNA small subunit methyltransferase G [Vibrio orientalis
CIP 102891]
Length = 210
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A VS E+L + + KW+K NL S ++ ++H+ DS+ + H
Sbjct: 8 LDALIAQTDLEVSSHQREQLVGYVEMLNKWNKAYNLTSVRDPQEMLVKHIMDSI-IVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I + + L++S K+ F++ V+ +
Sbjct: 67 LQGERFIDVGTGPGLPGIPLAIMNPTKQFC---LLDSLGKRIRFIKQVLHELKIDNVNPI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A + ++E+
Sbjct: 124 QSRVEEYQPEDKFDGVLSRAFASITDMVEWCHHL 157
>gi|260887476|ref|ZP_05898739.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|330840114|ref|YP_004414694.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|260862763|gb|EEX77263.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|329747878|gb|AEC01235.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
Length = 238
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L L + + +EK +Y L ++W+ K+NL + + + ++H+ DSL +
Sbjct: 6 LERASALYGLPLDAKQIEKFGIYYRLIIEWNAKMNLTAITEPREVAVKHIVDSLTALRGI 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GK 126
ID+G+G GFPGI I ++ + L++S K+ FL VV+ +
Sbjct: 66 EERDSLRLIDVGTGAGFPGIPLKIVRPDLK---LTLLDSLKKRVHFLETVVEALGLEGAE 122
Query: 127 VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R +EA + + D+ ++RA+A L L EY P++
Sbjct: 123 CLHGRAEEAARQSALRERFDIAASRAVARLPVLAEYLLPFVR 164
>gi|50123436|ref|YP_052603.1| 16S rRNA methyltransferase GidB [Pectobacterium atrosepticum
SCRI1043]
gi|55976380|sp|Q6CYI7|RSMG_ERWCT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49613962|emb|CAG77415.1| glucose inhibited division protein B [Pectobacterium atrosepticum
SCRI1043]
Length = 206
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Query: 13 NYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
N L N N +S + L + + KW+K NL S + +RH+ DS+ V +
Sbjct: 3 NTLDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLVRHIMDSI-VVE 61
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
H + +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 62 PHLHGQRFIDVGTGPGLPGIPLAIVRPE---SHFTLLDSLGKRVRFLRQVQHELQLENIT 118
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A L ++ +
Sbjct: 119 PVQSRVEDFPAEPPFDGVISRAFASLQDMISWCNHL 154
>gi|168464789|ref|ZP_02698681.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|195632297|gb|EDX50781.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
Length = 207
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYL 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|254226942|ref|ZP_04920508.1| hypothetical protein VCV51_1868 [Vibrio cholerae V51]
gi|125620547|gb|EAZ48915.1| hypothetical protein VCV51_1868 [Vibrio cholerae V51]
Length = 210
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGEHFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ FL+ V+ + E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLLVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RA A + ++ +
Sbjct: 132 PESGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|331002967|ref|ZP_08326479.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
gi|330413011|gb|EGG92386.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
Length = 241
Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
Y D L + + ++S + EKL FY L ++ +K +NL S + +++ +H DS
Sbjct: 2 YNDMARYL-SESEIPGIDISDDKKEKLYRFYELLIEKNKVMNLTSITELKECTYKHFIDS 60
Query: 63 LRVFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ + ++ DLG+G GFPGI +I ++ + LI+S NK+ F++ V
Sbjct: 61 ISLIKIVKDLDSKDYNIADLGTGAGFPGIPLAIVFPNLN---LTLIDSLNKRIKFIQEVC 117
Query: 119 QKTAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+ +RA+A+L +L EY P +
Sbjct: 118 ENLGLENVNAIHSRAEDIARNRDYRESFDICVSRAVANLASLSEYCLPLVK 168
>gi|238765115|ref|ZP_04626049.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
kristensenii ATCC 33638]
gi|238696667|gb|EEP89450.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
kristensenii ATCC 33638]
Length = 206
Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ + LLN + + +L + L KW+K NL S +RH+ DS+ V
Sbjct: 1 MLKKLDSLLNAAGIALPDQQKHQLVGYVELLDKWNKAYNLTSVRDPMQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H + +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLQGNRFIDVGTGPGLPGIPLAIVRPD---AHFVLLDSLGKRVRFLRQVQHELGLSN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R+++ D + +RA A L +L + +
Sbjct: 117 IEPVQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|261213273|ref|ZP_05927555.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC341]
gi|260837547|gb|EEX64250.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC341]
Length = 210
Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
+VS + E+L + L KW+K NL S + ++H+ DS+ V H +ID+
Sbjct: 17 LSVSEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSM-VVSPHLNGERFIDV 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PGI +I + L++S K+ FL+ V+ + + E
Sbjct: 76 GTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHELKITNVLPVQSRVEDFDP 132
Query: 139 ITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + ++ +
Sbjct: 133 EQGFDAVLSRAFASMTDMVNWCQHL 157
>gi|134301151|ref|YP_001114647.1| methyltransferase GidB [Desulfotomaculum reducens MI-1]
gi|189039383|sp|A4J9R9|RSMG_DESRM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134053851|gb|ABO51822.1| 16S rRNA m(7)G-527 methyltransferase [Desulfotomaculum reducens
MI-1]
Length = 240
Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D L+ ++++ E +Y L ++W+K INL + ++ ++H DS
Sbjct: 1 MNDLTITLKQAAKEMEFDLTENQTLAFEKYYNLLIEWNKNINLTAIIEPKEVALKHFIDS 60
Query: 63 LRVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L ++ P + +D+G+G GFPGI I I V L++S NK+ +FL V++K
Sbjct: 61 LTCLKILEIPCQANVLDIGTGAGFPGIPIKIFRPDIN---VTLMDSLNKRVNFLNEVIKK 117
Query: 121 TAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFP 162
R ++ + D + +RA+A L L EY P
Sbjct: 118 LGLTNICAIHDRAEDFGQKKEHREKYDYVLSRAVAKLKVLSEYCLP 163
>gi|323527851|ref|YP_004230004.1| methyltransferase GidB [Burkholderia sp. CCGE1001]
gi|323384853|gb|ADX56944.1| methyltransferase GidB [Burkholderia sp. CCGE1001]
Length = 238
Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 9/156 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
+S L KL + L KW+ NL + I+H+ DSL + P
Sbjct: 25 GLELSDTQLAKLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLAERNPRSV 84
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+GSGGG PGI+ +I V + + +KK +F + V R++
Sbjct: 85 LDVGSGGGLPGIVLAIVRPD---CAVTVNDIVHKKTAFQAQAKAELGLGNLSVVTGRVET 141
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWLYQK 167
DVI +RA A+L + + + ++
Sbjct: 142 LQPGAEVSAKFDVIVSRAFAELADFVTLARHLVAER 177
>gi|258626069|ref|ZP_05720920.1| Glucose inhibited division protein [Vibrio mimicus VM603]
gi|262166772|ref|ZP_06034509.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
VM223]
gi|262172751|ref|ZP_06040429.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
MB-451]
gi|258581595|gb|EEW06493.1| Glucose inhibited division protein [Vibrio mimicus VM603]
gi|261893827|gb|EEY39813.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
MB-451]
gi|262026488|gb|EEY45156.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
VM223]
Length = 210
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 6 SNSILRA-NYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
N + + L++ +V+ + E+L + L KW+K NL S + ++H+ DS
Sbjct: 1 MNPLRVKLDALISNTTLSVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V +H +ID+G+G G PGI +I + L++S K+ FL+ V+ +
Sbjct: 61 -LVVSVHLEGERFIDVGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHELK 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E D + +RA A + ++ +
Sbjct: 117 INNVLPVQSRVEEFDPEQGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|261823730|ref|YP_003261836.1| 16S rRNA methyltransferase GidB [Pectobacterium wasabiae WPP163]
gi|261607743|gb|ACX90229.1| methyltransferase GidB [Pectobacterium wasabiae WPP163]
Length = 206
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Query: 13 NYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
N L N N +S + L + + KW+K NL S + IRH+ DS+ V +
Sbjct: 3 NTLDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLIRHIMDSI-VVE 61
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 62 SHLSGQRFIDVGTGPGLPGIPLAIVRPE---SHFTLLDSLGKRVRFLRQVQHELQLENIT 118
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L ++ +
Sbjct: 119 PVQSRVEAFPAEPPFDGVISRAFASLQDMISWCGHL 154
>gi|71278438|ref|YP_271684.1| 16S rRNA methyltransferase GidB [Colwellia psychrerythraea 34H]
gi|82592862|sp|Q47U39|RSMG_COLP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71144178|gb|AAZ24651.1| methyltransferase GidB [Colwellia psychrerythraea 34H]
Length = 209
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
VS+E ++ L + L KW+K NL S + ++H+ DS + +ID
Sbjct: 15 QLVVSQEQIDLLIQYVELLNKWNKAYNLTSVRDPSEMLVKHIMDS-LMVGEVLIGKNFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L++S K+ +FLR VV + E Q
Sbjct: 74 VGTGPGLPGIPLAILYPERN---FVLLDSLGKRITFLRQVVFQLKLSNVTPVKARVEEYQ 130
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQKK 168
D + +RA + L+ ++ + + ++
Sbjct: 131 GEEPFDGVLSRAFSSLNDMVSWCKHLITTEQ 161
>gi|168239644|ref|ZP_02664702.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194734008|ref|YP_002116816.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|238690702|sp|B4TN41|RSMG_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|194709510|gb|ACF88731.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197287674|gb|EDY27065.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 207
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHQL 154
>gi|332143483|ref|YP_004429221.1| glucose-inhibited division protein B [Alteromonas macleodii str.
'Deep ecotype']
gi|254766873|sp|B4RS91|RSMG_ALTMD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|327553505|gb|AEB00224.1| glucose-inhibited division protein B [Alteromonas macleodii str.
'Deep ecotype']
Length = 211
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 4/157 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+IL + +S ++L + L KW+K NL S + ++H+ DSL +
Sbjct: 9 TILVQGLDALSLELSERQQQQLVDYVLLMDKWNKAYNLTSVRDPKQMMVKHILDSLAIVP 68
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
ID+G+G G PG+ +I L++S K+ F+ V +
Sbjct: 69 H-LEGDNIIDVGTGPGLPGMPLAIAFPEKR---FTLLDSLGKRVRFMTQSVHTLGLKNVT 124
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
EA D++ +RA A L +L + +
Sbjct: 125 PVQSRVEAHNGEVPYDIVLSRAFASLKDMLHWCQHLV 161
>gi|323340452|ref|ZP_08080708.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
gi|323092141|gb|EFZ34757.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
Length = 246
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 12/167 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
R +S +++ +Y + ++ +NL + + ++ +++H DSL
Sbjct: 5 EEFRQALAARGVELSDHQMQQFADYYEYLVAVNEHVNLTAITQKDEVYLKHFYDSLIPAL 64
Query: 68 LHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
D+G+G GFP I I +++ V +++S NK+ FL + ++
Sbjct: 65 TVKDLQTEALTLCDVGAGAGFPSIPMKIAFPNLK---VTIVDSLNKRIRFLNDLSERLGL 121
Query: 124 R-GKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E + + DV++ARA+A L L EY P
Sbjct: 122 EEVEFHHGRAEEFAGKKSRHRESYDVVTARAVARLSVLSEYCLPLAR 168
>gi|229524903|ref|ZP_04414308.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
bv. albensis VL426]
gi|229338484|gb|EEO03501.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
bv. albensis VL426]
Length = 210
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ FL+ V+ + + E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHELKINNVLPVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RA A + ++ +
Sbjct: 132 PESGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|327485242|gb|AEA79649.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Vibrio cholerae LMA3894-4]
Length = 210
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 GLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ FL+ V+ + E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RA A + ++ +
Sbjct: 132 PESGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|255540789|ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus communis]
gi|223550574|gb|EEF52061.1| Methyltransferase gidB, putative [Ricinus communis]
Length = 282
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
++ E++ ++ L+W++K+NL + + + RH+EDSL + I
Sbjct: 55 LNSRQKEQIRHYVDALLEWNQKMNLTAVTEANEVMRRHIEDSLAMLTPIRKSYISHCSSS 114
Query: 76 ------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+G+G G PG+I +I + V L+ES NK+ FL + V T +V
Sbjct: 115 IDNLKLVDVGTGPGLPGLILAIACPGWK---VTLLESMNKRCVFLEHAVNVTGLSNVEVL 171
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R + + DV ARA+A++ L EY P +
Sbjct: 172 RGRAESLGQNDSFREQFDVAVARAVAEMRVLAEYCLPLVR 211
>gi|260774972|ref|ZP_05883872.1| ribosomal RNA small subunit methyltransferase G [Vibrio
coralliilyticus ATCC BAA-450]
gi|260609062|gb|EEX35221.1| ribosomal RNA small subunit methyltransferase G [Vibrio
coralliilyticus ATCC BAA-450]
Length = 210
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A VS ++L + + KW+K NL S D ++H+ DS+ V H
Sbjct: 8 LDALIAQTKLEVSDNQRDQLVGYVEMLNKWNKAYNLTSVRDPSDMLVKHILDSI-VVSSH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI SI E L++S K+ F++ V+ +
Sbjct: 67 LQGQRFIDVGTGPGLPGIPLSIMNPDKEFY---LLDSLGKRIRFIKQVLHELKIENVTPI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A + ++E+
Sbjct: 124 QSRVEEFQPQDKFDGVLSRAFASMVDMVEWCHHL 157
>gi|258622944|ref|ZP_05717959.1| Glucose inhibited division protein [Vibrio mimicus VM573]
gi|258584727|gb|EEW09461.1| Glucose inhibited division protein [Vibrio mimicus VM573]
Length = 210
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 6 SNSILRA-NYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
N + + L++ +V+ + E+L + L KW+K NL S + ++H+ DS
Sbjct: 1 MNPLRVKLDALISNTTLSVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V +H +ID+G+G G PGI +I + L++S K+ FL+ V+ +
Sbjct: 61 -LVVSVHLEGERFIDVGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHELK 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E D + +RA A + ++ +
Sbjct: 117 INNVLPVQSRVEEFDPDQGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|78486513|ref|YP_392438.1| methyltransferase GidB [Thiomicrospira crunogena XCL-2]
gi|123554883|sp|Q31DK9|RSMG_THICR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78364799|gb|ABB42764.1| Glucose inhibited division protein B [Thiomicrospira crunogena
XCL-2]
Length = 216
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ + KL + L KW+K NL + V++ +I+H+ DSL V + ID+G+G
Sbjct: 25 NDQAWSKLLDYLALLQKWNKTYNLTAIRDVDEMFIKHILDSLSVAPYIDSERL-IDVGTG 83
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GG PGI +I + V+L++S +KK FL + + EA T
Sbjct: 84 GGLPGIPLAILFPERQ---VDLLDSNSKKTRFLVQAKAELGLKNVEVVHHRVEAYHPETL 140
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A LD +L ++ L +
Sbjct: 141 YDGVVSRAFASLDDMLNWTHHLLKPQ 166
>gi|71733888|ref|YP_277290.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|123634470|sp|Q48BF5|RSMG_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71554441|gb|AAZ33652.1| methyltransferase GidB [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 211
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S KK F V + E+ Q
Sbjct: 77 VGSGGGMPGIPMAILFPEGK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAESYQ 133
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 134 PEVPFDGIISRAFSSLEDFTGWTRHM 159
>gi|163732965|ref|ZP_02140409.1| methyltransferase GidB [Roseobacter litoralis Och 149]
gi|161393500|gb|EDQ17825.1| methyltransferase GidB [Roseobacter litoralis Och 149]
Length = 203
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRETL+ L ++ L LKW+ +INLVS S+++D W RH+ DS ++ W+DLGS
Sbjct: 10 VSRETLDALRAYHELLLKWNSRINLVSKSSIDDVWQRHIWDSAQIVDCAEDVKTWVDLGS 69
Query: 81 GGGFPGIITSIQLSSIEGGLVNLI-ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
GGG PG++ +I + ++ ES +KA+FLR V+++ + +V RI+ +
Sbjct: 70 GGGLPGLVVAIMAKVADPNWKTILVESDQRKAAFLRTVIRELSLNARVIVDRIETVAPLR 129
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
DV+SARALADL LL ++ L +
Sbjct: 130 --ADVVSARALADLSVLLSFAHRHLSPQ 155
>gi|56461729|ref|YP_157010.1| 16S rRNA methyltransferase GidB [Idiomarina loihiensis L2TR]
gi|81600227|sp|Q5QZI9|RSMG_IDILO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56180739|gb|AAV83461.1| Predicted S-adenosylmethionine-dependent methyltransferase
[Idiomarina loihiensis L2TR]
Length = 206
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L+ N+S +E+ L KW+K NL S +D RH+ DSL V
Sbjct: 1 MKEQLKGLLDQAQINLSEAQIEQQLALVGLLDKWNKAYNLTSVRNPKDMLTRHIMDSLAV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
Q + +ID+G+G G PG+ +I E L++S K+ F+R V +
Sbjct: 61 RQY-LHGQRFIDVGTGPGLPGLPLAIAEPDNE---FVLLDSLGKRIRFIRQVCHELKLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A L+ +L +
Sbjct: 117 VTAVQARVEDYQDEKQFDGVISRAFASLNDMLSWCEHL 154
>gi|292669231|ref|ZP_06602657.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
gi|292649072|gb|EFF67044.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
Length = 240
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++ +E+ + L + W++++NL + + ED ++H+ DSL + +
Sbjct: 16 GLALTAVQIEQCAVYNRLLIAWNERMNLTALTAPEDVAVKHIIDSLTAYDAKLFAPARTL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G G PGI ++ IE V L+++ K+ FL + R +E
Sbjct: 76 IDVGTGAGLPGIPLAVYAPKIE---VTLMDALGKRVKFLTEAAAAMELRNVRCIHARAEE 132
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
A P+ D+ +RA+A L LLEY+ P++
Sbjct: 133 AARRPEHRARYDIAVSRAVARLPVLLEYTLPFVR 166
>gi|298293754|ref|YP_003695693.1| methyltransferase GidB [Starkeya novella DSM 506]
gi|296930265|gb|ADH91074.1| methyltransferase GidB [Starkeya novella DSM 506]
Length = 217
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L L KW + INLV+ +T+ W RHV DSL++ L + W+DLGS
Sbjct: 18 VSRETEDRLVAIVALLEKWQRTINLVAPATLPVVWTRHVADSLQLIPLAGEATRWVDLGS 77
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQMI 139
GGGFPG++ + L+ G V L+ES ++KA+FLR + V RI++ P++
Sbjct: 78 GGGFPGLVVAAVLAERPGADVTLVESDSRKAAFLREAARIAELPATVLPSRIEQVAPKIA 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
+++SARALA L LL+ + P+L Q
Sbjct: 138 EGVEIVSARALAPLPKLLDLAAPFLAQ 164
>gi|319409463|emb|CBI83112.1| glucose inhibited division protein B [Bartonella schoenbuchensis
R1]
Length = 215
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 9 ILRANYLLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
I + L +VSRET+E L F L ++W+K+INL+S++TV W RH+ DS +++
Sbjct: 5 IEQKYQDLLNLVPSVSRETVENLMRFESLVIQWNKRINLISTATVPVLWTRHILDSAQIY 64
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
LH W D GSGGGFP I+ +I L + +GG ++L+ES KK +FLR V+
Sbjct: 65 PLHNQCLHWCDFGSGGGFPAIVIAIFLKNRKGGHIDLVESNGKKVAFLRTVIAHLDLPAT 124
Query: 127 VFACRIQEAPQMITTCDVISARALADLDT 155
V CRI++ Q I +VI+AR LA LD
Sbjct: 125 VHHCRIEDVYQKINKPEVITARGLASLDV 153
>gi|85714097|ref|ZP_01045086.1| Glucose inhibited division protein [Nitrobacter sp. Nb-311A]
gi|85699223|gb|EAQ37091.1| Glucose inhibited division protein [Nitrobacter sp. Nb-311A]
Length = 270
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS +T +L+ F L +W K NLV+ ST+ W RH+ DSL++ L P+ W DLGS
Sbjct: 62 VSPQTEARLDAFVGLLGQWQTKTNLVAPSTLPRLWTRHIADSLQLLALAPHAKRWADLGS 121
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQMI 139
GGGFPG++ + L+ IEG V+LIE KKA+FLR V+ TA+ G V I + ++
Sbjct: 122 GGGFPGVVLACALAGIEGARVDLIERNAKKAAFLREAVRITASPGIVHLTDIGDYVDRLE 181
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L LL ++ P + +
Sbjct: 182 DRIDCVTARALAPLQVLLGFAEPLVKK 208
>gi|158426334|ref|YP_001527626.1| 16S rRNA methyltransferase GidB [Azorhizobium caulinodans ORS 571]
gi|189039479|sp|A8I267|RSMG_AZOC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158333223|dbj|BAF90708.1| putative methyltransferase [Azorhizobium caulinodans ORS 571]
Length = 275
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLG 79
VSRETL +L+ +W K INLV+ +T+ D W RH+ DSL++ + W DLG
Sbjct: 49 VSRETLARLDTIAEQLTRWQKTINLVAPNTLPDLWHRHIADSLQLVWLVPETVLNWADLG 108
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ-M 138
SGGGFPG++ + L+ EG V L+ES +KA+FLR + A ++ RI++A Q +
Sbjct: 109 SGGGFPGLVVAAVLAEREGAHVTLVESDTRKAAFLREASRAAALPTRIVPERIEQASQRL 168
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
V+SARALA L LL+ + P+L
Sbjct: 169 AAGMQVVSARALAPLPKLLDLTEPFL 194
>gi|300812283|ref|ZP_07092719.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496703|gb|EFK31789.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 239
Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L L + +S ++ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPELFTETLSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L P D+G+G GFP + I +E V +++S K+ +FL +++K
Sbjct: 61 PLLLWPEVFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEK 117
Query: 121 TAAR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P D+++ARA+A + L EY
Sbjct: 118 LGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLSLAK 166
>gi|254520704|ref|ZP_05132760.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
gi|226914453|gb|EEH99654.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
Length = 239
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+++ L +S E+ + L +W++KINL + + E+ +H D ++ F+
Sbjct: 6 LMKEASLEVGMELSEHQYEQFIKYMRLLQEWNEKINLTAITEDEEVIKKHFIDCIKAFKS 65
Query: 69 HPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ ID+G+G GFPG+ +I +++ + L++S NK+ +FL V+ +
Sbjct: 66 DAIKNAKTIIDVGTGAGFPGLPIAIMNPNVQ---ITLLDSLNKRINFLNTVINNIGLKNV 122
Query: 127 V-FACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P++ DV ++RA+A++ L E+ P++
Sbjct: 123 ITIHSRAEDGARKPELREKFDVATSRAVANMAVLSEFCMPYIK 165
>gi|125596647|gb|EAZ36427.1| hypothetical protein OsJ_20757 [Oryza sativa Japonica Group]
Length = 295
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-------LRVFQLHPYPS 73
+S ++ + L W++++NL + + + RHV DS R ++
Sbjct: 64 LSPSQQRQVSLYVDALLDWNQRMNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDLGGM 123
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+GSG G PG+I ++ S + L+ES K+ FL + V+ V R
Sbjct: 124 RLVDVGSGAGLPGLILAVARPSWK---FTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRA 180
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ P DV ARA+A+L L EY P +
Sbjct: 181 ENVGQSPDFREAFDVAVARAVAELKVLAEYCLPLVR 216
>gi|90023651|ref|YP_529478.1| glucose inhibited division protein B [Saccharophagus degradans
2-40]
gi|122995697|sp|Q21DG3|RSMG_SACD2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89953251|gb|ABD83266.1| methyltransferase GidB [Saccharophagus degradans 2-40]
Length = 223
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + + +L + LF KW+K NL + E + +H+ DSL + +ID
Sbjct: 24 ELTLSEQQVNQLLDYLELFEKWNKAYNLSAIRDAEGMFTKHLLDSLSIAPH-LTGERFID 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGG PGI +I L++S KK FL V Q R E Q
Sbjct: 83 VGTGGGLPGIPMAICFPQ---RHFTLLDSAGKKVRFLFQVKQALGLSNVDTQNRRVETFQ 139
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
D + +RA A + +L + ++
Sbjct: 140 PQPQFDGVISRAFASITYMLTWCNHLIHD 168
>gi|226941924|ref|YP_002796998.1| 16S rRNA methyltransferase GidB [Laribacter hongkongensis HLHK9]
gi|254766894|sp|C1D5H2|RSMG_LARHH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226716851|gb|ACO75989.1| GidB [Laribacter hongkongensis HLHK9]
Length = 207
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 6 SN--SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N L+A +S L ++ L KW++ NL + HV DSL
Sbjct: 1 MNLKEELKAGLAELGLALSAPQELLLVHYVELLDKWNRVYNLTAVRETGRMLSYHVLDSL 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
L +D+GSGGG PGI +I + L+++ +KK +FL+ V +
Sbjct: 61 AALPLVA-GQRILDVGSGGGMPGIPFAISQPDW---SLTLLDANHKKTTFLKQAVIELGL 116
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
C EA Q DVI++RA +DL + + L +
Sbjct: 117 TNTEVVCERVEAFQPERKFDVITSRAFSDLAEFVRLTRHLLAE 159
>gi|261346699|ref|ZP_05974343.1| 16S rRNA methyltransferase GidB [Providencia rustigianii DSM 4541]
gi|282565099|gb|EFB70634.1| 16S rRNA methyltransferase GidB [Providencia rustigianii DSM 4541]
Length = 207
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 6/164 (3%)
Query: 6 SNSILRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ I + LL + ++ + ++L + L KW+K NL S E +RH+ DS+
Sbjct: 1 MDLIAKLTKLLAKTDIILTEKQKQQLVDYVGLLNKWNKAYNLTSVRDPELMLVRHIMDSI 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V H +ID+G+G G PG+ +I L++S K+ FL+ V +
Sbjct: 61 -VVNDHLKGYKFIDVGTGPGLPGVPLAIVRPD---SHFVLLDSLGKRIRFLKQVQHELGL 116
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + D + +RA A L+ +L + ++
Sbjct: 117 NNIEPVQARVEEYPVKDGFDGVISRAFASLNDMLSWCHHLPAEE 160
>gi|237809877|ref|YP_002894317.1| methyltransferase GidB [Tolumonas auensis DSM 9187]
gi|237502138|gb|ACQ94731.1| methyltransferase GidB [Tolumonas auensis DSM 9187]
Length = 209
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 4/158 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++S + ++L L KW+K NL S E +RH+ DS+ V +
Sbjct: 8 LESLLQQANISLSDQQKQQLLALVGLLHKWNKAYNLTSVREPEAMLVRHILDSI-VVAPY 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PG+ +I + L++S K+ F+R V+ + + V
Sbjct: 67 LNGSRFIDVGTGPGLPGLPLAIVQPDKQ---FVLLDSLGKRIRFIRQVILELGLKNVVAV 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E T D + +RA A L+ +L + +
Sbjct: 124 QSRVEEFHDETGFDGVLSRAFASLNDMLSWCRHLPAPQ 161
>gi|37524080|ref|NP_927424.1| glucose-inhibited division protein B [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|55976478|sp|Q7NA87|RSMG_PHOLL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|36783503|emb|CAE12343.1| Glucose inhibited division protein B [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 206
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 7/158 (4%)
Query: 9 ILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L LL +S + ++L + + KW+K NL S E +RH+ DS+ V
Sbjct: 1 MLNKLELLLTKAGIELSLQQKQQLVAYVDMLNKWNKAYNLTSVREPEQMLVRHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VSPYLQGHRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELDLVN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L ++ +
Sbjct: 117 IEPVQSRVEAYSSEPPFDGVISRAFASLKDMVSWCSHL 154
>gi|223932622|ref|ZP_03624622.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|330832234|ref|YP_004401059.1| methyltransferase GidB [Streptococcus suis ST3]
gi|223898732|gb|EEF65093.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|329306457|gb|AEB80873.1| methyltransferase GidB [Streptococcus suis ST3]
Length = 237
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 69/164 (42%), Gaps = 8/164 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ ++ + + ++ L ++W++KINL + + + +++H DS+
Sbjct: 4 EVFYKTLADQGIQLTDQQKHQFHRYFQLLVEWNEKINLTAITEESEVYLKHFYDSIAPIL 63
Query: 68 LHPYPSIW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+G+G GFP + I ++ +++ + + L ++
Sbjct: 64 QGHIQNEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDSLNKRINFLHLLAEELELEG-- 121
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+++ARA+A + L E + P+L
Sbjct: 122 VHFYHGRAEDFAQDKNFRAQFDLVTARAVARMQILSELTIPYLK 165
>gi|330937307|gb|EGH41315.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. pisi str.
1704B]
Length = 214
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 21 GIDLSPAQNEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFIE-GTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R +
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAESYR 136
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 137 PEV-PFDGIISRAFSSLEDFTGWTRHM 162
>gi|15642767|ref|NP_232400.1| 16S rRNA methyltransferase GidB [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|153820110|ref|ZP_01972777.1| hypothetical protein A5C_0004 [Vibrio cholerae NCTC 8457]
gi|153821960|ref|ZP_01974627.1| hypothetical protein A5E_0009 [Vibrio cholerae B33]
gi|227082886|ref|YP_002811437.1| glucose inhibited division protein B [Vibrio cholerae M66-2]
gi|229508287|ref|ZP_04397791.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae BX
330286]
gi|229508639|ref|ZP_04398134.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
B33]
gi|229517145|ref|ZP_04406591.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC9]
gi|229606561|ref|YP_002877209.1| 16S rRNA methyltransferase GidB [Vibrio cholerae MJ-1236]
gi|254851565|ref|ZP_05240915.1| glucose-inhibited division protein B [Vibrio cholerae MO10]
gi|255746816|ref|ZP_05420762.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholera
CIRS 101]
gi|262155896|ref|ZP_06029018.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
INDRE 91/1]
gi|298501186|ref|ZP_07010985.1| 16S rRNA methyltransferase GidB [Vibrio cholerae MAK 757]
gi|20177906|sp|Q9KNG5|RSMG_VIBCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766911|sp|C3LSJ9|RSMG_VIBCM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|9657376|gb|AAF95913.1| glucose inhibited division protein B [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|126509341|gb|EAZ71935.1| hypothetical protein A5C_0004 [Vibrio cholerae NCTC 8457]
gi|126520499|gb|EAZ77722.1| hypothetical protein A5E_0009 [Vibrio cholerae B33]
gi|227010774|gb|ACP06986.1| glucose inhibited division protein B [Vibrio cholerae M66-2]
gi|229346208|gb|EEO11180.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC9]
gi|229354353|gb|EEO19281.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
B33]
gi|229354560|gb|EEO19482.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae BX
330286]
gi|229369216|gb|ACQ59639.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
MJ-1236]
gi|254847270|gb|EET25684.1| glucose-inhibited division protein B [Vibrio cholerae MO10]
gi|255735573|gb|EET90972.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholera
CIRS 101]
gi|262030348|gb|EEY48990.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
INDRE 91/1]
gi|297540058|gb|EFH76120.1| 16S rRNA methyltransferase GidB [Vibrio cholerae MAK 757]
Length = 210
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G PGI +I E LI+S K+ FL+ V+ + E
Sbjct: 75 VGSGPGLPGIPLAIMHPDKE---FVLIDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RA A + ++ +
Sbjct: 132 PESGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|332687257|ref|YP_004457031.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
gi|332371266|dbj|BAK22222.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
Length = 238
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++ +++ + +Y L ++W++K+NL + E +++H DS+ + +
Sbjct: 14 NIALTDYQMKQFDSYYKLLIEWNQKMNLTTILNKEAVYLKHFYDSISLAFFANFKGRHSL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+G+G GFP I I ++ + +I+S NK+ SFL +V + ++ R +
Sbjct: 74 CDIGAGAGFPSIPLKILFPDLQ---ITIIDSLNKRISFLTELVNQLEMDHVFLYHERAEV 130
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
Q D ++ARA+A L+ L E P + ++
Sbjct: 131 FGQDSTFRGQFDYVTARAVARLNVLSELCLPLVRKE 166
>gi|145634515|ref|ZP_01790224.1| glucose-inhibited division protein B [Haemophilus influenzae
PittAA]
gi|319897995|ref|YP_004136192.1| methyltransferase, sam-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3031]
gi|145268060|gb|EDK08055.1| glucose-inhibited division protein B [Haemophilus influenzae
PittAA]
gi|317433501|emb|CBY81884.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3031]
Length = 203
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLAQANIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSPYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELGLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ +
Sbjct: 117 VTPVLSRVEEYQPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|302388590|ref|YP_003824412.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
gi|302199218|gb|ADL06789.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
Length = 243
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 13 NYLLNTYNV-SRE----TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SL 63
N N+ S E + + ++ L ++W+K +NL + + +++ +H D
Sbjct: 7 EKFQNELNLLSIELKNYQINQFYDYFQLLIEWNKFMNLTAITEMDEVITKHFVDSLSLVK 66
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V ++ ID+G+G GFPGI I ++ + L++S NK+ +FL + +
Sbjct: 67 AVKEMRTKNYRIIDVGTGAGFPGIPLKIAFPDLK---ITLMDSLNKRINFLNEAINRLEL 123
Query: 124 R-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + R ++ + D+ +RA+A+L TL EY P++
Sbjct: 124 KEIEAIHGRAEDLGRDPLHREQYDLCLSRAVANLSTLSEYCMPFVKP 170
>gi|325694167|gb|EGD36085.1| glucose inhibited division protein B [Streptococcus sanguinis
SK150]
Length = 237
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++ ++ ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 10 LAQQGIELNDRQKDQFGRYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDN 69
Query: 74 IW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + +
Sbjct: 70 QELKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEEIGLDKVHFYH 126
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 127 GRAEDFAQDKAFRAQFDLVTARAVARMQILSELTIPYLK 165
>gi|170694310|ref|ZP_02885464.1| methyltransferase GidB [Burkholderia graminis C4D1M]
gi|170140733|gb|EDT08907.1| methyltransferase GidB [Burkholderia graminis C4D1M]
Length = 232
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 9/154 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWI 76
++S L KL + L KW+ NL + I+H+ DSL + P +
Sbjct: 27 LDLSDAQLGKLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLALRNPRSVL 86
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSGGG PGI+ +I L V + + +KK +F + V R++
Sbjct: 87 DVGSGGGLPGIVLAIVLPDCG---VTVNDIVHKKTAFQAQAKAELGLTNLSVVTGRVETL 143
Query: 136 PQMIT---TCDVISARALADLDTLLEYSFPWLYQ 166
DVI +RA A+L + + + +
Sbjct: 144 QPGAEVPAKFDVIVSRAFAELADFVTLARHLVAE 177
>gi|254250983|ref|ZP_04944301.1| Glucose inhibited division protein [Burkholderia dolosa AUO158]
gi|124893592|gb|EAY67472.1| Glucose inhibited division protein [Burkholderia dolosa AUO158]
Length = 228
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDL 78
++ +L + L KW+ NL + + I+H+ DSL + + +D+
Sbjct: 29 LTDTQRNQLLDYVALLGKWNAVYNLTAIRDPQQMMIQHILDSLSIVPHLRARESARVLDV 88
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP-- 136
GSGGG PGI+ +I L ++++ K+ + +R ++ A V R++
Sbjct: 89 GSGGGLPGIVLAIVRPDWHVTLNDIVQKKSAFQTQMRAELK--LANLSVVTGRVESLQPG 146
Query: 137 -QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL ++ + + +
Sbjct: 147 VDVPEKFDVIVSRAFADLSDFVKLARHLVAR 177
>gi|256425869|ref|YP_003126522.1| methyltransferase GidB [Chitinophaga pinensis DSM 2588]
gi|256040777|gb|ACU64321.1| methyltransferase GidB [Chitinophaga pinensis DSM 2588]
Length = 207
Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLH 69
+L + + + L++L+ L+ +W++KIN++S ++ + +HV SL +
Sbjct: 2 EIVLKYFSDFTDTQLQQLQALSGLYQEWNEKINVISRKDIDALYEKHVLHSLSIAAVADF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
P +DLG+GGGFPGI +I ++ L++S KK + V + + F
Sbjct: 62 PNGMQILDLGTGGGFPGIPLAIFFPEVQFH---LVDSIGKKIKVVEGVSEALGLKNVTFK 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R+++ D++ +RA+A L L +S P L +
Sbjct: 119 HSRVEDIKD--RKFDLVVSRAVAPLKDLWRWSKPVLKK 154
>gi|170731466|ref|YP_001763413.1| 16S rRNA methyltransferase GidB [Burkholderia cenocepacia MC0-3]
gi|169814708|gb|ACA89291.1| methyltransferase GidB [Burkholderia cenocepacia MC0-3]
Length = 228
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 7/163 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 17 MLVEGTAALDLTLTDTQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVPH 76
Query: 69 --HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++ A
Sbjct: 77 LRGRTSAHVLDVGSGGGLPGIVLAIVEPGWQVTLNDIVQKKSAFQTQMRAELK--LANLS 134
Query: 127 VFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 135 VVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|153829675|ref|ZP_01982342.1| hypothetical protein A59_0021 [Vibrio cholerae 623-39]
gi|148874851|gb|EDL72986.1| hypothetical protein A59_0021 [Vibrio cholerae 623-39]
Length = 210
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ FL+ V+ + E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ D + +RA A + ++ +
Sbjct: 132 PESSFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|254504857|ref|ZP_05117008.1| methyltransferase GidB [Labrenzia alexandrii DFL-11]
gi|222440928|gb|EEE47607.1| methyltransferase GidB [Labrenzia alexandrii DFL-11]
Length = 194
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 57/143 (39%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+++L+ + L LKW NL++ ST+ D W RHV DSL+ +P +W+D+GSGGGFP
Sbjct: 1 MDRLQIYVDLVLKWQPAQNLIAPSTIPDIWTRHVADSLQTQWSYPEAKVWVDIGSGGGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ--MITTCD 143
G++T+I L+ V++IES +KA+FLR +++T ++G V A RI+ + D
Sbjct: 61 GVVTAILLADEPDAHVHMIESNQRKAAFLRTALRETGSKGTVHAGRIESVAEGWSHGPVD 120
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
+SARALA L+ L + + P+ Q
Sbjct: 121 AVSARALASLNLLFDLAEPFTAQ 143
>gi|83942029|ref|ZP_00954491.1| glucose-inhibited division protein B [Sulfitobacter sp. EE-36]
gi|83847849|gb|EAP85724.1| glucose-inhibited division protein B [Sulfitobacter sp. EE-36]
Length = 202
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETLEKL++F L KW+ KINL+S +V + W RH+ DSL+++ P S W+DLG
Sbjct: 8 DVSRETLEKLQHFSRLVEKWTAKINLISKPSVPEMWERHILDSLQIYSHAPNASHWVDLG 67
Query: 80 SGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFP I+ ++ L+ES +K +FLR +++ V RI+E +
Sbjct: 68 SGGGFPAIVVALMSQQDERATKFTLVESDQRKCAFLRTAIRELELNATVANARIEEIEPL 127
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
DV+SARAL+DL LL ++ L
Sbjct: 128 E--ADVLSARALSDLTALLGFADRHL 151
>gi|146318067|ref|YP_001197779.1| 16S rRNA methyltransferase GidB [Streptococcus suis 05ZYH33]
gi|146320245|ref|YP_001199956.1| 16S rRNA methyltransferase GidB [Streptococcus suis 98HAH33]
gi|253751261|ref|YP_003024402.1| methyltransferase GidB [Streptococcus suis SC84]
gi|253753162|ref|YP_003026302.1| methyltransferase GidB [Streptococcus suis P1/7]
gi|253754985|ref|YP_003028125.1| methyltransferase GidB [Streptococcus suis BM407]
gi|166224623|sp|A4VZL7|RSMG_STRS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224625|sp|A4VTE0|RSMG_STRSY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145688873|gb|ABP89379.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 05ZYH33]
gi|145691051|gb|ABP91556.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 98HAH33]
gi|251815550|emb|CAZ51133.1| methyltransferase GidB [Streptococcus suis SC84]
gi|251817449|emb|CAZ55190.1| methyltransferase GidB [Streptococcus suis BM407]
gi|251819407|emb|CAR44867.1| methyltransferase GidB [Streptococcus suis P1/7]
gi|292557829|gb|ADE30830.1| Glucose inhibited cell division protein [Streptococcus suis GZ1]
gi|319757540|gb|ADV69482.1| 16S rRNA methyltransferase GidB [Streptococcus suis JS14]
Length = 237
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-- 65
+ ++ + + ++ L ++W++KINL + + + +++H DS+
Sbjct: 4 EVFYKTLADQGIQLTDQQKHQFHRYFQLLVEWNEKINLTAITEESEVYLKHFYDSIAPLL 63
Query: 66 -FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P +D+G+G GFP + I ++ +++ + + L ++
Sbjct: 64 QGHIQNEPLRLLDIGAGAGFPSLPMKIIFPQLDVTIIDSLNKRINFLHLLAEELELEG-- 121
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+++ARA+A + L E + P+L
Sbjct: 122 VHFYHGRAEDFAQDKNFRAQFDLVTARAVARMQILSELTIPYLK 165
>gi|332289272|ref|YP_004420124.1| 16S rRNA methyltransferase GidB [Gallibacterium anatis UMN179]
gi|330432168|gb|AEC17227.1| 16S rRNA methyltransferase GidB [Gallibacterium anatis UMN179]
Length = 206
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + +++ + +L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKEKLDSLLRQADISLTDQQKSQLVKLVELLHKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I L++S K+ SF+R V++
Sbjct: 60 VSRYLVGERFIDVGTGPGLPGLPLAIANPDK---TFYLLDSLGKRISFIRNAVRELGLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A L + ++
Sbjct: 117 VEPVLSRVEEYQPEQKFDGVLSRAFASLADMTQWCRHL 154
>gi|126724524|ref|ZP_01740367.1| glucose-inhibited division protein B [Rhodobacterales bacterium
HTCC2150]
gi|126705688|gb|EBA04778.1| glucose-inhibited division protein B [Rhodobacterales bacterium
HTCC2150]
Length = 203
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 58/143 (40%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDL 78
NVSRET++ L F L +KW+ KINLVS ++++ W RH+ DS++VF + +W+D+
Sbjct: 8 NVSRETMDDLSVFADLLIKWNAKINLVSPKSIDELWHRHIADSVQVFDLVKVEKGLWVDM 67
Query: 79 GSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+GGGFPG I +I + IES +K+ FLR V+++ +V RI+
Sbjct: 68 GTGGGFPGAICAIVAKHKKPEMKFVFIESDTRKSLFLRTVIRELDLNARVENERIE--KT 125
Query: 138 MITTCDVISARALADLDTLLEYS 160
DV+SARALA LD LL ++
Sbjct: 126 QPQNADVVSARALASLDLLLGFA 148
>gi|145640462|ref|ZP_01796046.1| glucose-inhibited division protein B [Haemophilus influenzae R3021]
gi|145275048|gb|EDK14910.1| glucose-inhibited division protein B [Haemophilus influenzae
22.4-21]
Length = 203
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLAQANIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSPYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELGLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ +
Sbjct: 117 VTPVLSRVEEYQPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|147673868|ref|YP_001218411.1| 16S rRNA methyltransferase GidB [Vibrio cholerae O395]
gi|262167090|ref|ZP_06034805.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC27]
gi|172047494|sp|A5F469|RSMG_VIBC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146315751|gb|ABQ20290.1| hypothetical protein VC0395_A2518 [Vibrio cholerae O395]
gi|227011998|gb|ACP08208.1| glucose inhibited division protein B [Vibrio cholerae O395]
gi|262024476|gb|EEY43162.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC27]
Length = 210
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G PGI +I E L++S K+ FL+ V+ + E
Sbjct: 75 VGSGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RA A + ++ +
Sbjct: 132 PESGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|118591439|ref|ZP_01548837.1| glucose-inhibited division protein B [Stappia aggregata IAM 12614]
gi|118436111|gb|EAV42754.1| glucose-inhibited division protein B [Stappia aggregata IAM 12614]
Length = 194
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+++L+ + L LKW NL++ ST+ D W RHV DSL+ +P W+D+GSGGGFP
Sbjct: 1 MDRLQIYVDLVLKWQPAQNLIAPSTIPDIWTRHVADSLQTQWSYPEARTWVDIGSGGGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ--MITTCD 143
G++T+I L+ G V++IES +K +FLR +++T +RG V RI+ + + D
Sbjct: 61 GVVTAILLADEPGAHVHMIESNQRKVAFLRTALRETGSRGTVHPGRIESVAKDWKYGSVD 120
Query: 144 VISARALADLDTLLEYSFPW 163
+SARALA LD L + S P+
Sbjct: 121 AVSARALASLDLLFQLSEPF 140
>gi|312868952|ref|ZP_07729132.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
gi|311095516|gb|EFQ53780.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
Length = 240
Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 13/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--- 61
N + N++ +++ +Y L + ++++NL + D +++H D
Sbjct: 1 MNPEQFQQALADRGINLTDRQMQQFADYYQLLVTTNRQVNLTRITEENDVYLKHFYDSLT 60
Query: 62 -SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ +L D+G+G GFP + I ++ V +++S NK+ +FL+ +V K
Sbjct: 61 GAFAEPRLQTEQLPLCDIGAGAGFPSLPLKIAFPQLQ---VTIVDSLNKRINFLQELVAK 117
Query: 121 TAARGKVFACRIQE-----APQMITTCDVISARALADLDTLLEYSFP 162
G E D++ ARA+A L L E P
Sbjct: 118 LGLSGVTLVHDRAETFSAKKAANREKYDLVLARAVARLSVLAELCLP 164
>gi|292490168|ref|YP_003533063.1| glucose-inhibited division protein GidB [Erwinia amylovora
CFBP1430]
gi|292901170|ref|YP_003540539.1| glucose-inhibited division protein B [Erwinia amylovora ATCC 49946]
gi|291201018|emb|CBJ48157.1| methyltransferase (glucose-inhibited division protein B) [Erwinia
amylovora ATCC 49946]
gi|291555610|emb|CBA24236.1| glucose-inhibited division protein GidB [Erwinia amylovora
CFBP1430]
gi|312174361|emb|CBX82614.1| glucose-inhibited division protein GidB [Erwinia amylovora ATCC
BAA-2158]
Length = 208
Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S +L + + KW+K NL S + +RH+ DS+ V + H +ID
Sbjct: 13 GISLSDGQKHQLIGYVEMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLVGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+G G PG+ +I L++S K+ FL+ V + R+++
Sbjct: 72 VGTGPGLPGVPLAIVRP---QAHFTLLDSLGKRIRFLKQVQHELQLANIMPVQSRVEDFA 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A L ++ + Q+
Sbjct: 129 GEPG-FDGVISRAFASLTDMVSWCRHLPAQQ 158
>gi|226947203|ref|YP_002802276.1| 16S rRNA methyltransferase GidB [Azotobacter vinelandii DJ]
gi|226722130|gb|ACO81301.1| Glucose inhibited division protein B, gidB [Azotobacter vinelandii
DJ]
Length = 215
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWI 76
+S E+L + L +KW+K NL + ++ RH+ DSL V W+
Sbjct: 20 GIELSERQREQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVTPQIAEAGDDWL 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSGGG PG+ +I L++S KK FL V + +V R++
Sbjct: 80 DVGSGGGMPGVPLAILFPGRR---FTLLDSNGKKTRFLTQVKLELQLQNLEVVHSRVEAF 136
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
I +RA + L ++
Sbjct: 137 KP-AQPFSGICSRAFSSLADFAGWTRHL 163
>gi|167587940|ref|ZP_02380328.1| Glucose inhibited division protein [Burkholderia ubonensis Bu]
Length = 212
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDL 78
++ +L + L KW+ NL + + I+H+ DSL + + +D+
Sbjct: 13 LTDAQRNQLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARVLDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP-- 136
GSGGG PGI+ +I L + L ++++ K+ + R ++ A V R++
Sbjct: 73 GSGGGLPGIVLAIVLPDWQITLNDIVQKKSAFQTQTRAELK--LANLSVVTGRVETLQPG 130
Query: 137 -QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ DVI +RA ADL ++ + + +
Sbjct: 131 VEVPEKFDVIVSRAFADLSDFVKLARHLVAR 161
>gi|153212978|ref|ZP_01948572.1| hypothetical protein A55_0019 [Vibrio cholerae 1587]
gi|153803601|ref|ZP_01958187.1| hypothetical protein A51_B2828 [Vibrio cholerae MZO-3]
gi|229515959|ref|ZP_04405416.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
TMA 21]
gi|229520163|ref|ZP_04409590.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae TM
11079-80]
gi|297581980|ref|ZP_06943900.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|124116204|gb|EAY35024.1| hypothetical protein A55_0019 [Vibrio cholerae 1587]
gi|124120866|gb|EAY39609.1| hypothetical protein A51_B2828 [Vibrio cholerae MZO-3]
gi|229342757|gb|EEO07748.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae TM
11079-80]
gi|229347059|gb|EEO12021.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
TMA 21]
gi|297533847|gb|EFH72688.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 210
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ FL+ V+ + E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RA A + ++ +
Sbjct: 132 PESGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|206558429|ref|YP_002229189.1| 16S rRNA methyltransferase GidB [Burkholderia cenocepacia J2315]
gi|238693059|sp|B4E582|RSMG_BURCJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|198034466|emb|CAR50331.1| methyltransferase GidB [Burkholderia cenocepacia J2315]
Length = 228
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 70/165 (42%), Gaps = 7/165 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 15 EQMLVEGTAALDLTLTDAQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIV 74
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++
Sbjct: 75 PHLRGRTSARVLDVGSGGGLPGIVLAIVEPGWQVTLNDIVQKKSAFQTQMRAELKLVNLS 134
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 135 --VVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|237747166|ref|ZP_04577646.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes HOxBLS]
gi|229378517|gb|EEO28608.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes HOxBLS]
Length = 221
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 3/159 (1%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ L KL + L KW+ NL + H+ DSL +
Sbjct: 9 FLLEKGARELGISLGDNQLNKLSTYLVLLSKWNAIYNLTAIRDWRAMLTHHLMDSLSIVP 68
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+D+GSGGG PG+I +I ++ V LI+ +KK +F+ V + A +
Sbjct: 69 FLLECKNLLDVGSGGGLPGLILAIAYPELK---VTLIDIVHKKTAFMNQVKIELALKNVT 125
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + DVI +RA + L + S L +
Sbjct: 126 VCTGRVEELFVDKKFDVIVSRAFSSLSDFVSLSGHLLDE 164
>gi|262402092|ref|ZP_06078656.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC586]
gi|262351738|gb|EEZ00870.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC586]
Length = 210
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 6 SNSILRA-NYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
N + + L++ +V+ + E+L + L KW+K NL S + ++H+ DS
Sbjct: 1 MNPLRVKLDALISNTTLSVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V +H +ID+G+G G PGI +I + L++S K+ FL+ V+ +
Sbjct: 61 -LVVSVHLEGERFIDVGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHELK 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E D + +RA A + ++ +
Sbjct: 117 IDNVLPVQSRVEEFDPEQGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|145628868|ref|ZP_01784668.1| glucose-inhibited division protein B [Haemophilus influenzae
22.1-21]
gi|144979338|gb|EDJ89024.1| glucose-inhibited division protein B [Haemophilus influenzae
22.1-21]
Length = 184
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLVQANIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSPYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E Q D + +RA A L + ++ +
Sbjct: 117 VIPVLSRVEEYQPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|312882251|ref|ZP_07741997.1| 16S rRNA methyltransferase GidB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370095|gb|EFP97601.1| 16S rRNA methyltransferase GidB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 210
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L VS EKL + L KW+K NL S + I+H+ DS+ V
Sbjct: 7 LLDDLIDQTNLEVSTIQKEKLLGYVSLLDKWNKAYNLTSVRKPSEMVIKHIMDSI-VVSE 65
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +ID+G+G G PGI +I + E L++S K+ F++ V+ + +
Sbjct: 66 YLEGDRFIDVGTGPGLPGIPLAIMQPNKE---FVLLDSLGKRVRFIKQVIHELDIKNVTP 122
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A + ++E+
Sbjct: 123 VQSRVEEYQTNDKFDGVLSRAFASMTDMVEWCQHLPKD 160
>gi|229530213|ref|ZP_04419602.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
12129(1)]
gi|229332346|gb|EEN97833.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
12129(1)]
Length = 210
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI ++ E L++S K+ FL+ V+ + E
Sbjct: 75 VGTGPGLPGIPLAVMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RA A + ++ +
Sbjct: 132 PESGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|170750485|ref|YP_001756745.1| methyltransferase GidB [Methylobacterium radiotolerans JCM 2831]
gi|193806447|sp|B1M187|RSMG_METRJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170657007|gb|ACB26062.1| methyltransferase GidB [Methylobacterium radiotolerans JCM 2831]
Length = 211
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VSRET E+L+ + +W NLV +T+ + W RH++D+L++ L P W+DLG
Sbjct: 14 GVSRETAERLDLYVAQLRRWQPIKNLVGPATLTEVWSRHIDDALQLLDLAPEARTWLDLG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PG+I +I G V+L+ES +K +FL + T A +V RI+
Sbjct: 74 SGAGIPGLILAIAGRE-RGVRVDLVESNARKCAFLTETARLTEAPARVRNARIEAVIGEY 132
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
DV+ ARALA + LL ++ P L
Sbjct: 133 GGTDVVCARALAPMTQLLAWTEPLLK 158
>gi|186477784|ref|YP_001859254.1| 16S rRNA methyltransferase GidB [Burkholderia phymatum STM815]
gi|184194243|gb|ACC72208.1| methyltransferase GidB [Burkholderia phymatum STM815]
Length = 225
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
+++ + KL + L KW+ NL + I+H+ DSL + +
Sbjct: 26 GFDLRADQKGKLLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLASLERASA 85
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSGGG PGI+ +I + + ++++ K+ S ++ + T V R++
Sbjct: 86 LDVGSGGGLPGIVLAIVFPAWSITVNDIVQKKSAFQSQVKAELGLTNLS--VVTGRVERL 143
Query: 136 PQMIT---TCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA A+L + + +
Sbjct: 144 QPGVEVPGKFDVIVSRAFAELADFVTLARHLVAD 177
>gi|238787870|ref|ZP_04631667.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
frederiksenii ATCC 33641]
gi|238724213|gb|EEQ15856.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
frederiksenii ATCC 33641]
Length = 209
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 6 SNSILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+L+ + LL + + +L + L KW+K NL S +RH+ DS
Sbjct: 1 MIVVLKKLDSLLKAADIALPDQQKHQLIGYVELLHKWNKAYNLTSVRDPMQMLVRHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ V H + +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 61 I-VVNPHLQGNRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELG 116
Query: 123 A-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R+++ D + +RA A L +L + +
Sbjct: 117 LSNIEPVQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHLPAK 160
>gi|307243462|ref|ZP_07525618.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
gi|306493186|gb|EFM65183.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
Length = 242
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 1 MKYCDSNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
M N L L + + V +++ E + + +++++ +NL + + +I+H
Sbjct: 1 MNQNIENIELLKKGLADFSILVDDLMVDRFEKYRQILVEYNQHMNLTGITEQREVYIKHF 60
Query: 60 EDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+ +F+ ID+G+G GFPG+ I +I + L++S NK+ +FL+ V
Sbjct: 61 LDSVAIFKNGYIGDGLSVIDVGTGAGFPGLPFKICNPNIR---LTLLDSLNKRINFLKAV 117
Query: 118 VQKTAARG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
Q+ G R ++ P D+ +ARA+A L LLE P++
Sbjct: 118 GQELGLDGIDYVHGRAEDMAHKPDHREKYDIATARAVASLPVLLELCVPYVR 169
>gi|209966080|ref|YP_002298995.1| methyltransferase GidB [Rhodospirillum centenum SW]
gi|226797829|sp|B6IV59|RSMG_RHOCS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209959546|gb|ACJ00183.1| methyltransferase GidB [Rhodospirillum centenum SW]
Length = 216
Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats.
Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 7/158 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-L 68
RA + VSRETL++L + L KW+ INLV+ ST++D W RH DS ++F L
Sbjct: 11 FRATDFQAAFGVSRETLDRLAAYEALLRKWNPAINLVARSTLDDVWERHFADSAQLFALL 70
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +DLGSG GFPG++ +I + V+LIES +KA+FLR V + T A V
Sbjct: 71 PEGTRVLVDLGSGAGFPGLVLAI----LGVPEVHLIESDGRKAAFLREVARVTGAPATVH 126
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A R ++A D +SARALADL LL + +L
Sbjct: 127 AQRAEQAEAP--PADAVSARALADLSALLPLAARFLRP 162
>gi|161523274|ref|YP_001578286.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans ATCC
17616]
gi|189351953|ref|YP_001947581.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans ATCC
17616]
gi|238687050|sp|A9AJF2|RSMG_BURM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160340703|gb|ABX13789.1| methyltransferase GidB [Burkholderia multivorans ATCC 17616]
gi|189335975|dbj|BAG45045.1| glucose inhibited division protein B [Burkholderia multivorans ATCC
17616]
Length = 228
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDL 78
+S +L + L KW+ NL + + I+H+ DSL + + +D+
Sbjct: 29 LSDTQRNRLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARVLDV 88
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP-- 136
GSGGG PG++ +I + L ++++ K+ + R ++ T V R++
Sbjct: 89 GSGGGLPGLVLAIVEPDWQVTLNDIVQKKSAFQTQTRAELKLTNLS--VVTGRVETLRPG 146
Query: 137 -QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ D+I +RA ADL ++ + +
Sbjct: 147 VEVPEKFDIIVSRAFADLSDFVKLARHLVAP 177
>gi|149190484|ref|ZP_01868755.1| glucose-inhibited division protein B [Vibrio shilonii AK1]
gi|148835738|gb|EDL52704.1| glucose-inhibited division protein B [Vibrio shilonii AK1]
Length = 211
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 6/163 (3%)
Query: 7 NSILRANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N ++ LL+ + VS ++L + L KW+K NL S ED ++H+ DS+
Sbjct: 4 NLTVKLEQLLSETSLEVSELQKQQLVGYVQLLDKWNKAYNLTSVRRPEDMLVKHILDSI- 62
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ H +ID+G+G G PGI +I + L++S K+ F++ VV +
Sbjct: 63 IVGEHLEGERFIDVGTGPGLPGIPLAIMHPN---RSFTLLDSLGKRIRFIKQVVHELKLS 119
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E D + +RA A + ++ + +
Sbjct: 120 NVTAVQSRVEEFDPEGGFDGVLSRAFASMTDMVNWCEHLPKSQ 162
>gi|83953078|ref|ZP_00961800.1| glucose-inhibited division protein B [Sulfitobacter sp. NAS-14.1]
gi|83842046|gb|EAP81214.1| glucose-inhibited division protein B [Sulfitobacter sp. NAS-14.1]
Length = 202
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETLEKL++F L KW+ KINL+S +V + W RH+ DSL+++ P W+DLG
Sbjct: 8 DVSRETLEKLQHFSQLVEKWTAKINLISKPSVPEMWERHILDSLQIYSHAPNAGHWVDLG 67
Query: 80 SGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFP I+ ++ L+ES +K +FLR +++ V RI+ +
Sbjct: 68 SGGGFPAIVVALMSQQDERATKFTLVESDQRKCAFLRTAIRELELNATVANARIEAIEPL 127
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
DV+SARAL+DL LL ++ L
Sbjct: 128 E--ADVLSARALSDLTALLGFADRHL 151
>gi|307731469|ref|YP_003908693.1| methyltransferase GidB [Burkholderia sp. CCGE1003]
gi|307586004|gb|ADN59402.1| methyltransferase GidB [Burkholderia sp. CCGE1003]
Length = 227
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
++ KL + L KW+ NL + I+H+ DSL + P
Sbjct: 25 GLDLDDTQRAKLLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLSQRKPGSV 84
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+GSGGG PGI+ +I V + + +KK +F + V R++
Sbjct: 85 LDVGSGGGLPGIVLAIVKPDWR---VTVNDIVHKKTAFQAQAKAELGLSNLSVVTGRVET 141
Query: 135 AP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ DVI +RA A+L + + + Q
Sbjct: 142 LQAGAEVPAKFDVIVSRAFAELADFVTLARHLVAQ 176
>gi|319760788|ref|YP_004124725.1| methyltransferase gidb [Alicycliphilus denitrificans BC]
gi|330822708|ref|YP_004386011.1| methyltransferase GidB [Alicycliphilus denitrificans K601]
gi|317115349|gb|ADU97837.1| methyltransferase GidB [Alicycliphilus denitrificans BC]
gi|329308080|gb|AEB82495.1| methyltransferase GidB [Alicycliphilus denitrificans K601]
Length = 215
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP----- 72
+++ E + +L F L KW+K NL + ++ H+ DSL
Sbjct: 15 GLDLTEEQIARLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVAPLRRHLAQQG 74
Query: 73 ---SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSGGG PG++ +I ++ V+ +++ KKA+F++ R
Sbjct: 75 GAGRRLLDVGSGGGLPGVVFAICCPDLD---VSCVDTVAKKAAFIQQAAAALGLRN--LH 129
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV+S RA A L + +S L
Sbjct: 130 GIHARVETLAGPFDVVSCRAFASLPDFVNWSRQVLAP 166
>gi|221214300|ref|ZP_03587272.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD1]
gi|221165955|gb|EED98429.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD1]
Length = 212
Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDL 78
+S +L + L KW+ NL + + I+H+ DSL + + +D+
Sbjct: 13 LSDTQRNRLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARVLDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP-- 136
GSGGG PGI+ +I + L ++++ K+ + R ++ T V R++
Sbjct: 73 GSGGGLPGIVLAIVEPDWQVTLNDIVQKKSAFQTQTRAELKLTNLS--VVTGRVESLRPG 130
Query: 137 -QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ D+I +RA ADL ++ + +
Sbjct: 131 VEVPEKFDIIVSRAFADLSDFVKLARHLVAP 161
>gi|260774534|ref|ZP_05883447.1| ribosomal RNA small subunit methyltransferase G [Vibrio
metschnikovii CIP 69.14]
gi|260610440|gb|EEX35646.1| ribosomal RNA small subunit methyltransferase G [Vibrio
metschnikovii CIP 69.14]
Length = 210
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 6 SNSI---LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
N + L A VS + E+L + L KW+K NL S ++ ++H+ DS
Sbjct: 1 MNLLRSKLDALIAQTDLVVSDQQREQLVGYVELLNKWNKAYNLTSVRDPQEMLVKHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ V + +ID+G+G G PGI +I + L++S K+ F++ V+ +
Sbjct: 61 I-VVSPYLQGKRFIDVGTGPGLPGIPLAIMNPDRQ---FVLLDSLGKRIRFIKQVLHELR 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E + D + +RA A + ++E+
Sbjct: 117 IDNVTALQSRVEEFKPEHGFDGVLSRAFASMLDMVEWCHHL 157
>gi|254246687|ref|ZP_04940008.1| Methyltransferase [Burkholderia cenocepacia PC184]
gi|124871463|gb|EAY63179.1| Methyltransferase [Burkholderia cenocepacia PC184]
Length = 228
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 7/163 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 17 MLVEGTAALDLTLTDTQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVPH 76
Query: 69 --HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++ A
Sbjct: 77 LRGRASARVLDVGSGGGLPGIVLAIVEPGWQVTLNDIVQKKSAFQTQMRAELK--LANLS 134
Query: 127 VFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 135 VVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|115522413|ref|YP_779324.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris BisA53]
gi|122297909|sp|Q07UP0|RSMG_RHOP5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115516360|gb|ABJ04344.1| methyltransferase GidB [Rhodopseudomonas palustris BisA53]
Length = 231
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 87/147 (59%), Gaps = 2/147 (1%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L+ + L L+W K NL+S +T+ W RH+ DSL++ + P W+D GS
Sbjct: 27 VSRETESRLDAYVALLLQWQAKTNLISPATLPQLWTRHIADSLQLLTVAPDARTWLDFGS 86
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPG++ + ++ + G V L+E KKA+FLR ++ + G+V I + +
Sbjct: 87 GGGFPGVVLACAMAELGG-SVTLVERNAKKAAFLREALRVSGGVGQVILADIGDSVDRFP 145
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D I+ARA+A L L+ ++ P L++
Sbjct: 146 PHIDCITARAVAPLHQLIGFAEPLLHR 172
>gi|121730053|ref|ZP_01682462.1| hypothetical protein VCV52_0002 [Vibrio cholerae V52]
gi|121628202|gb|EAX60725.1| hypothetical protein VCV52_0002 [Vibrio cholerae V52]
Length = 210
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ FL+ V+ + E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHNLKINNVLPVQSRVEEFD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RA A + ++ +
Sbjct: 132 PESGFDGVLSRAFASMTDMVNWCQHLPKP 160
>gi|259502035|ref|ZP_05744937.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
gi|259169999|gb|EEW54494.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
Length = 241
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--- 61
N + N+S + +++ +Y + ++++NL + D +++H D
Sbjct: 1 MNPEQFQQALAERGINLSDQQMQQFADYYRQLVATNRQVNLTRITEENDVYLKHFYDSLT 60
Query: 62 -SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+L +L D+G+G GFP + I ++ V +++S NK+ SFL+ +V +
Sbjct: 61 GALAEPRLQTEQLTLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRISFLQALVAQ 117
Query: 121 TAARGKVFACRIQE-----APQMITTCDVISARALADLDTLLEYSFP 162
G E D++ ARA+A L L E P
Sbjct: 118 LGLTGVTLVHDRAETFSAKQSPHREQYDLVLARAVARLSVLSELCLP 164
>gi|221202190|ref|ZP_03575225.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2M]
gi|221208749|ref|ZP_03581748.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2]
gi|221171381|gb|EEE03829.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2]
gi|221177984|gb|EEE10396.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2M]
Length = 212
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDL 78
+S +L + L KW+ NL + + I+H+ DSL + + +D+
Sbjct: 13 LSDTQRNRLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARALDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP-- 136
GSGGG PGI+ +I + L ++++ K+ + R ++ T V R++
Sbjct: 73 GSGGGLPGIVLAIVEPDWQVTLNDIVQKKSAFQTQTRAELKLTNLS--VVTGRVESLRPG 130
Query: 137 -QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ D+I +RA ADL ++ + +
Sbjct: 131 VEVPEKFDIIVSRAFADLSDFVKLARHLVAP 161
>gi|302381485|ref|YP_003817308.1| methyltransferase GidB [Brevundimonas subvibrioides ATCC 15264]
gi|302192113|gb|ADK99684.1| methyltransferase GidB [Brevundimonas subvibrioides ATCC 15264]
Length = 204
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + LE F + + + +NLV ++ DFW RH DS ++ L + W DLG+G G
Sbjct: 15 ERMADLERFRVMLTEANAVMNLVGPDSLPDFWSRHAWDSAQLVDLAGFGKTWADLGAGAG 74
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
FPG++ +I G V LI+S K+ FL+ +V + V R +E D
Sbjct: 75 FPGVVLAILAKGRPGSHVWLIDSLQKRCRFLQTIVDELELPATVVWGRAEEQA---LKVD 131
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
+++ARA+A +D LL Y+ P+L +
Sbjct: 132 IVTARAVAPMDKLLGYAQPYLSR 154
>gi|115350141|ref|YP_771980.1| 16S rRNA methyltransferase GidB [Burkholderia ambifaria AMMD]
gi|122324419|sp|Q0BJM7|RSMG_BURCM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115280129|gb|ABI85646.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia ambifaria AMMD]
Length = 228
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 7/165 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 15 EQMLVDGTAALDIALTDAQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIV 74
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++ A
Sbjct: 75 PHLRDRASARVLDVGSGGGLPGIVLAIVRPDWQVTLNDIVQKKSAFQTQMRAELK--LAN 132
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVELLQPGVDVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|145636245|ref|ZP_01791914.1| glucose-inhibited division protein B [Haemophilus influenzae
PittHH]
gi|145270410|gb|EDK10344.1| glucose-inhibited division protein B [Haemophilus influenzae
PittHH]
Length = 203
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLAQANIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSPYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ +
Sbjct: 117 VTPVLSRVEEYQPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|260437681|ref|ZP_05791497.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
gi|292809907|gb|EFF69112.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
Length = 237
Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 10 LRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
Y+ N ++++ + KL +Y L ++ +K +NL + + +D I+H DSL + +
Sbjct: 4 FLKEYIQNIGIELNQDKINKLINYYELLIEKNKVMNLTAITEYKDVVIKHFADSLSIIKA 63
Query: 68 -LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G 125
+ ID+G+G GFPG++ I ++ + L++S NK+ +FL V+ + +
Sbjct: 64 VNMSEVTNIIDIGTGAGFPGMVLKIVFPDVK---ITLLDSLNKRVNFLNEVITELQLKDI 120
Query: 126 KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ D+ +RA+A+L TL EY P++
Sbjct: 121 NAIHGRAEDYAHNDIYREKYDLCVSRAVANLSTLSEYCIPYVK 163
>gi|320530365|ref|ZP_08031427.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
gi|320137377|gb|EFW29297.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
Length = 244
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
++ LE+ + L L W++++NL + + ED ++H+ DSL + + + ID+
Sbjct: 20 LTNAQLEQCVRYNELLLTWNERMNLTALTAPEDVAVKHIVDSLSAYDVPLFARAKSLIDV 79
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQ---E 134
G+G G PGI +I IE V L+++ K+ FL V+++ + V R +
Sbjct: 80 GTGAGLPGIPLAIYAPEIE---VTLMDALQKRVRFLTEVIEQLGLKNVVCVHARAEAAAR 136
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
D+ +RA+A L L EY+ P++
Sbjct: 137 MHTYRAQYDIAVSRAVARLPVLAEYALPFVR 167
>gi|260429113|ref|ZP_05783090.1| 16S rRNA methyltransferase GidB [Citreicella sp. SE45]
gi|260419736|gb|EEX12989.1| 16S rRNA methyltransferase GidB [Citreicella sp. SE45]
Length = 204
Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats.
Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 4/153 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L +VSRET EKL++ L KWS +INLVS +T+ED W RH+ DS +VF + S
Sbjct: 5 LPGLDVSRETQEKLDHLVALLAKWSPRINLVSRTTLEDSWTRHILDSAQVFSVPEVQSGH 64
Query: 76 I-DLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D GSGGGFPG++ +I + V L+ES +K FLR +++T ++ + RI+
Sbjct: 65 WADFGSGGGFPGLVVAILAQDLAPDLKVTLVESDQRKCVFLRTALRETKVDAQILSERIE 124
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DVISARALADL LL ++ + +
Sbjct: 125 KILPLR--ADVISARALADLTVLLAFADRHMSK 155
>gi|82523806|emb|CAI78549.1| hypothetical protein [uncultured Chloroflexi bacterium]
Length = 262
Score = 103 bits (256), Expect = 9e-21, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ L+ L + ++W+ +INL + ++ +H D + + P +D+
Sbjct: 41 LNAAQLDALARYEQELIQWNARINLTAIRHPQEIRTKHFLDSLTCLLALRETPPERLVDV 100
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ---E 134
G+G GFPGI + ++ + L+ES KKA F R+VV+ + +V R + +
Sbjct: 101 GTGAGFPGIPLKVIYPKMQ---LTLVESVGKKAEFCRHVVRTLSLTGVEVIQGRAETLGQ 157
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
+P+ D ARA+A L L EY P +
Sbjct: 158 SPEHREKFDWAVARAVAILPVLAEYLLPLVR 188
>gi|332366130|gb|EGJ43886.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1059]
Length = 237
Score = 103 bits (256), Expect = 9e-21, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 12 QQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIGNQE 71
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G+G GFP + I ++ +++ + + + + + R
Sbjct: 72 LKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLK--LLAEELELDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDRAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|302880135|ref|YP_003848699.1| methyltransferase GidB [Gallionella capsiferriformans ES-2]
gi|302582924|gb|ADL56935.1| methyltransferase GidB [Gallionella capsiferriformans ES-2]
Length = 216
Score = 103 bits (256), Expect = 9e-21, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +V +T +KL + L +KW+K NL + + H+ DSL V H
Sbjct: 13 LHRGIAELGLSVDSDTEQKLIDYLQLLVKWNKVYNLTAIRDPQQMVSYHLLDSLAV-LPH 71
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
W+D+G G G PG++ +I V L++S +KK F++ + +
Sbjct: 72 LQAGRWLDVGCGAGLPGLVLAICRPDW---SVTLLDSNSKKTGFVQQAIIELGLHNAQVR 128
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
C E I +RA +L L + +
Sbjct: 129 CARVEDVDASQKYSGIISRAFTELGDFLRVTRHLMAD 165
>gi|172059161|ref|YP_001806813.1| 16S rRNA methyltransferase GidB [Burkholderia ambifaria MC40-6]
gi|238689147|sp|B1YQK3|RSMG_BURA4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171991678|gb|ACB62597.1| methyltransferase GidB [Burkholderia ambifaria MC40-6]
Length = 228
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 15 EQMLVDGTAALDIALTDAQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIV 74
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++ A
Sbjct: 75 PHLRDRASARVLDVGSGGGLPGIVLAIVQPDWQVTLNDIVQKKSAFQTQMRAELK--LAN 132
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVELLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|258517427|ref|YP_003193649.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
gi|257781132|gb|ACV65026.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
Length = 236
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L ++S + + + FY L + ++ NL + + +D +RH DSL
Sbjct: 1 MEQYLFKGAEQLDISLSLDQVRQFIKFYNLIVLGNQACNLTAITAQQDVVVRHFLDSLSC 60
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +ID+G+G GFPGI I + V LIES NKK +FL+ V++
Sbjct: 61 VKAVSFDGDLRFIDVGTGAGFPGIPLKIMYPRL---SVVLIESINKKVNFLKNTVKELGL 117
Query: 124 RGKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
A E D ++ARA+A L+ L EY P +
Sbjct: 118 NNIDVAQLRAEEAGTLIDFRERFDRVTARAVAQLNILAEYCLPLVK 163
>gi|289168084|ref|YP_003446353.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
gi|288907651|emb|CBJ22488.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
Length = 237
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI---DLGSGG 82
E+ E ++ L ++W++KINL + + ++ +++H DS+ P+ I D+G+G
Sbjct: 22 KEQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIAPILQGLIPNETIKLLDIGAGA 81
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA---PQM 138
GFP + I ++ V +I+S NK+ +FL+ + Q+ + R ++
Sbjct: 82 GFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELNLEGVHFYHGRAEDFAQDKNF 138
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
D ++ARA+A + L E + P+L
Sbjct: 139 RAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|261867024|ref|YP_003254946.1| 16S rRNA methyltransferase GidB [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412356|gb|ACX81727.1| glucose-inhibited division protein B [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 227
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + + + ++L F L KW+K NL S +D ++H+ DS V
Sbjct: 23 MKAKLDSLLAQAKIQPNDQQKQQLIDFVNLLNKWNKAYNLTSVRDPQDMLVKHILDS-LV 81
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PG+ +I + L++S K+ SF+R V++
Sbjct: 82 VSPHLQGDRFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRISFIRNAVRELGLTN 138
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + E+ +
Sbjct: 139 VKPVLSRVEEYQPEEKFDGVLSRAFASLKDMTEWCWHLPKP 179
>gi|254418145|ref|ZP_05031869.1| methyltransferase GidB [Brevundimonas sp. BAL3]
gi|196184322|gb|EDX79298.1| methyltransferase GidB [Brevundimonas sp. BAL3]
Length = 210
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ + + L+ F + + +NLV ++ DFW RH DS ++ P W DLG+G
Sbjct: 16 TSQQIADLDDFRIRLSEANSVMNLVGPDSLPDFWNRHAWDSAQLLTHAPGARTWADLGAG 75
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFPG++ +I L G V LI+S K+ FL+ +V V R +E
Sbjct: 76 AGFPGVVLAILLKDAPGAHVWLIDSLGKRCRFLQEIVDVMDLPATVINGRAEEQA---VK 132
Query: 142 CDVISARALADLDTLLEYSFPW 163
CD+++ARA+A ++ LL Y+ P+
Sbjct: 133 CDIVTARAVAPMERLLGYAQPY 154
>gi|254437935|ref|ZP_05051429.1| methyltransferase GidB [Octadecabacter antarcticus 307]
gi|198253381|gb|EDY77695.1| methyltransferase GidB [Octadecabacter antarcticus 307]
Length = 206
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DL 78
+VSRET+EKLE L +KW+K INL++ ++V + W RH+ DS +VF P DL
Sbjct: 12 DVSRETMEKLEQLSALIIKWTKAINLIAPNSVPNLWDRHIVDSAQVFHCAPDSWTHWVDL 71
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGG P ++ +I + L+ LIES +K FL ++ + RI A +
Sbjct: 72 GSGGGLPALVVAIL--DQQNRLITLIESDKRKCLFLTTARRELGLNISIINRRIANAETV 129
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
++ISARALA L+ LL Y+ +L
Sbjct: 130 --PANIISARALAPLNDLLGYADQFL 153
>gi|170699463|ref|ZP_02890506.1| methyltransferase GidB [Burkholderia ambifaria IOP40-10]
gi|170135612|gb|EDT03897.1| methyltransferase GidB [Burkholderia ambifaria IOP40-10]
Length = 228
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 7/165 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 15 EQMLVDGTAALDIALTDAQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIV 74
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++ A
Sbjct: 75 PHLRDRASARVLDVGSGGGLPGIVLAIVQPDWQVTLNDIVQKKSAFQTQMRAELK--LAN 132
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVELLQPGVDVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|16272434|ref|NP_438647.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae Rd KW20]
gi|68249089|ref|YP_248201.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae 86-028NP]
gi|145630331|ref|ZP_01786112.1| glucose-inhibited division protein B [Haemophilus influenzae R3021]
gi|148827683|ref|YP_001292436.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae PittGG]
gi|260580449|ref|ZP_05848277.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae RdAW]
gi|260582247|ref|ZP_05850040.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae NT127]
gi|319775586|ref|YP_004138074.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3047]
gi|329122368|ref|ZP_08250955.1| glucose inhibited division protein B [Haemophilus aegyptius ATCC
11116]
gi|1169897|sp|P44728|RSMG_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81336505|sp|Q4QN56|RSMG_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224593|sp|A5UGZ7|RSMG_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1573466|gb|AAC22146.1| glucose-inhibited division protein (gidB) [Haemophilus influenzae
Rd KW20]
gi|68057288|gb|AAX87541.1| methyltransferase GidB [Haemophilus influenzae 86-028NP]
gi|144984066|gb|EDJ91503.1| glucose-inhibited division protein B [Haemophilus influenzae R3021]
gi|148718925|gb|ABR00053.1| glucose-inhibited division protein B [Haemophilus influenzae
PittGG]
gi|260092791|gb|EEW76726.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae RdAW]
gi|260094615|gb|EEW78510.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae NT127]
gi|301169207|emb|CBW28804.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae 10810]
gi|317450177|emb|CBY86393.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3047]
gi|327473650|gb|EGF19069.1| glucose inhibited division protein B [Haemophilus aegyptius ATCC
11116]
Length = 203
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLAQANIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSPYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ +
Sbjct: 117 VTPVLSRVEEYQPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|325688172|gb|EGD30191.1| glucose inhibited division protein B [Streptococcus sanguinis SK72]
Length = 237
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 10 LAQQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIEN 69
Query: 74 IW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G+G GFP + I ++ +++ + + L ++ + +
Sbjct: 70 QELKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELELD--KVHFYHG 127
Query: 131 RIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|259910325|ref|YP_002650681.1| 16S rRNA methyltransferase GidB [Erwinia pyrifoliae Ep1/96]
gi|224965947|emb|CAX57480.1| Methyltransferase (Glucose-inhibited division protein B) [Erwinia
pyrifoliae Ep1/96]
gi|283480448|emb|CAY76364.1| glucose-inhibited division protein GidB [Erwinia pyrifoliae DSM
12163]
Length = 208
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 8/158 (5%)
Query: 9 ILRANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
I + + LL +S ++L + + KW+K NL S + +RH+ DS+ V
Sbjct: 2 ISQLSILLKSAGIPLSDSQKQQLVGYVGMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VV 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ H +ID+G+G G PG+ +I L++S K+ FL+ V +
Sbjct: 61 EPHLVGDRFIDVGTGPGLPGVPLAIVRP---QAHFTLLDSLGKRVRFLKQVQHELKLANI 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A L ++ +
Sbjct: 118 TPVQSRVEDFAG-EPPFDGVISRAFASLTDMVSWCHHL 154
>gi|134294226|ref|YP_001117961.1| 16S rRNA methyltransferase GidB [Burkholderia vietnamiensis G4]
gi|189039489|sp|A4JA23|RSMG_BURVG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134137383|gb|ABO53126.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia vietnamiensis
G4]
Length = 228
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 7/165 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+L ++ +L + L KW+ NL + I+H+ DSL +
Sbjct: 15 EQMLIDGTAALDIVLTDAQRNQLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIV 74
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++ T
Sbjct: 75 PHLRGRTDARVLDVGSGGGLPGIVLAIVQPGWQVTLNDIVQKKSAFQTQMRAELKLTNLS 134
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 135 --VVTGRVESLQPGGEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|164686454|ref|ZP_02210482.1| hypothetical protein CLOBAR_00019 [Clostridium bartlettii DSM
16795]
gi|164604465|gb|EDQ97930.1| hypothetical protein CLOBAR_00019 [Clostridium bartlettii DSM
16795]
Length = 239
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--V 65
ILR S + L + + + ++W++K+NL ++ +I+H DS+
Sbjct: 5 DILRQGIEDFGIEASDKMLADFQKYKEILVEWNQKMNLTGIEDEKEVFIKHFLDSISAVS 64
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
ID+G+G GFPG+ I L ++ V L++S NK+ +FL+ V +
Sbjct: 65 KGYIKNGMSLIDVGTGAGFPGMPLRISLPDLK---VTLLDSLNKRINFLQEVANQIDIDD 121
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+ +ARA+A L L+E+ P++
Sbjct: 122 IEFIHGRAEDFGKDENYRECFDIATARAVAGLPALMEFCVPFVK 165
>gi|238926482|ref|ZP_04658242.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
gi|238885676|gb|EEQ49314.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
Length = 240
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 9/165 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
IL A ++ E + + + + L W+ ++NL + + ED ++H+ DSL +
Sbjct: 5 EEILTARAAEAGIPLTAEQVGQFSVYNEMLLDWNTRMNLTALTAPEDVAVKHIIDSLTAY 64
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
ID+G+G G PGI ++ + V L++S NK+ FL V
Sbjct: 65 DAALFDGARTLIDVGTGAGLPGIPLAVYAPHL---TVTLLDSLNKRVRFLMEVTAAMGLP 121
Query: 124 RGKVFA---CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ +RA+A L LLEY+ P++
Sbjct: 122 NVRCIHARAEEAARTAEHRAAYDIAVSRAVARLPVLLEYALPFVR 166
>gi|238750332|ref|ZP_04611834.1| Ribosomal RNA small subunit methyltransferase G [Yersinia rohdei
ATCC 43380]
gi|238711565|gb|EEQ03781.1| Ribosomal RNA small subunit methyltransferase G [Yersinia rohdei
ATCC 43380]
Length = 214
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ + LLN + + +L + L KW+K NL S +RH+ DS+ V
Sbjct: 9 VLKKLDSLLNAAEITLPDQQKHQLIGYVELLHKWNKAYNLTSVRDPLQMLVRHILDSI-V 67
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 68 VNPHLQGSRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRIRFLRQVQHELGLNN 124
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R+++ D + +RA A L +L + +
Sbjct: 125 IEPVQSRVEDFVA-EPPFDGVISRAFASLQDMLSWCHHLPAK 165
>gi|238759550|ref|ZP_04620712.1| Ribosomal RNA small subunit methyltransferase G [Yersinia aldovae
ATCC 35236]
gi|238702209|gb|EEP94764.1| Ribosomal RNA small subunit methyltransferase G [Yersinia aldovae
ATCC 35236]
Length = 206
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 9/162 (5%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ N LL + + +L + L KW+K NL S +RH+ DS+ V
Sbjct: 1 MLKKLNSLLTAAGIALPDQQKYQLVGYVELLHKWNKAYNLTSVRDPMQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H + +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLQGNRFIDVGTGPGLPGIPLAIVRPD---AHFTLLDSLGKRVRFLRQVQHELGLTN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R+++ D + +RA A L +L + +
Sbjct: 117 IDPVQSRVEDFVA-EPPFDGVISRAFASLQDMLSWCHHLPAK 157
>gi|325525644|gb|EGD03418.1| 16S rRNA methyltransferase GidB [Burkholderia sp. TJI49]
Length = 228
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 7/165 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 15 EQMLVEGAAALDLALTDTQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIV 74
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI+ +I + L ++++ K+ + R ++ A
Sbjct: 75 PHLRGRASARVLDVGSGGGLPGIVLAIVEPDWQITLNDIVQKKSAFQTQTRAELK--LAN 132
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|330812745|ref|YP_004357207.1| glucose inhibited division protein B methyltransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327380853|gb|AEA72203.1| putative glucose inhibited division protein B methyltransferase
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 211
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ +L + L +KW+K NL + ++ RH+ DSL V W+D+GS
Sbjct: 21 LTEAQHAQLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFVENG-RWLDVGS 79
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGG PGI +I + V ++S KK FL V + EA Q
Sbjct: 80 GGGMPGIPLAILFPDSQ---VTCLDSNGKKTRFLTQVKLELKLDNLQVIHSRVEAFQPAE 136
Query: 141 TCDVISARALADLDTLLEYSFPW 163
+ I +RA + ++ ++
Sbjct: 137 PFNGIISRAFSSMENFSNWTRHL 159
>gi|170739704|ref|YP_001768359.1| methyltransferase GidB [Methylobacterium sp. 4-46]
gi|193806448|sp|B0UJI7|RSMG_METS4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168193978|gb|ACA15925.1| methyltransferase GidB [Methylobacterium sp. 4-46]
Length = 212
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
+ +L VSRET L+ + +W NLV +T+ D W RH+ DSL++ P
Sbjct: 5 DRDRVLAEAGVSRETAAALDLYVAQLTRWQAIKNLVGPATLPDVWTRHIADSLQLLDAAP 64
Query: 71 YPSIWIDLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
W+DLGSG G PG+I +I + + V+L+ES +K +FL+ + T A ++
Sbjct: 65 QARTWLDLGSGAGIPGLILAIAGVRNRPDLRVDLVESNARKGAFLQETARLTGAPARIHV 124
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
RI+ DV+ ARALA L L+ ++ P L
Sbjct: 125 ARIERVVAGFRGVDVVCARALAPLPQLIAWTAPLLK 160
>gi|189426682|ref|YP_001953859.1| methyltransferase GidB [Geobacter lovleyi SZ]
gi|189422941|gb|ACD97339.1| methyltransferase GidB [Geobacter lovleyi SZ]
Length = 215
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N +L ++ + E L+W+KKINL + + ++ I+H+ DSL
Sbjct: 1 MNRELLTKAVAELNLELTEQQYGACELLLQELLRWNKKINLTAITGRDEMTIKHLIDSLH 60
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSG GFP ++ +I ++ + K + +++ T
Sbjct: 61 LVPELRPGDRILDVGSGAGFPALVLAIVRPDCLITSIDAVGKKISFQKHIGRLLKLTNL- 119
Query: 125 GKVFACRIQEAPQMI-TTCDVISARALADLDTLLEYSFPWL 164
+ R++ D++++RA + L+ +E + P +
Sbjct: 120 -EPLHGRVELLAADRSGGFDLVTSRAFSSLELFVELAAPLV 159
>gi|301155224|emb|CBW14689.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
parainfluenzae T3T1]
Length = 203
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L ++ + ++L L KW+K NL S ++ ++H+ DS+ V
Sbjct: 1 MKAKLENLLAQAEIQLTDQQKDQLIQLVQLLNKWNKAYNLTSVRDPQEMLVKHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I + + L++S K+ SF+R V++
Sbjct: 60 VSPYLQGEHFIDVGTGPGLPGLPLAIINPTKQ---FVLLDSLGKRISFIRNAVRELGLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ +
Sbjct: 117 VEPVLSRVEEYQPEQKFDGVLSRAFASLKDMTDWCHHLPKK 157
>gi|291165907|gb|EFE27954.1| 16S rRNA methyltransferase GidB [Filifactor alocis ATCC 35896]
Length = 237
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV- 65
N+IL+ L ++ + + L+ +K +NL + + + + +H DSL
Sbjct: 3 NTILKDGLALWNQQITEQQEFDFHIYMQHLLEKNKVMNLTNITEENEIYTKHFLDSLSCL 62
Query: 66 -FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAA 123
P S ID+G+G GFP + I ++ L++ + + + V+ +
Sbjct: 63 SVYPIPKNSTVIDIGTGAGFPSVPIKIMRRDLKMTLLDSLNKRINFLKEVGEVLHFEDMT 122
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A + + + D +RA+A L LLEY+ P+L
Sbjct: 123 YLHGRAEDLAQKAEYRQMYDFAVSRAVASLPVLLEYTIPFLK 164
>gi|145632754|ref|ZP_01788488.1| glucose-inhibited division protein B [Haemophilus influenzae 3655]
gi|144986949|gb|EDJ93501.1| glucose-inhibited division protein B [Haemophilus influenzae 3655]
Length = 203
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLAQANIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSPYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ +
Sbjct: 117 VTPVLSRVEEYQPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|312897436|ref|ZP_07756860.1| 16S rRNA methyltransferase GidB [Megasphaera micronuciformis F0359]
gi|310621497|gb|EFQ05033.1| 16S rRNA methyltransferase GidB [Megasphaera micronuciformis F0359]
Length = 237
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 13/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M C + + R L N++ + LEK + F L + +K +NL + + ++ ++H
Sbjct: 1 MFPCKGDELFR----LAYPNITDDELEKFKIFAGLLEEKNKVMNLTAITDADEVTVKHFI 56
Query: 61 DSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + + + +DLG+G GFPGI +I ++ + +S K+ +FL+ V
Sbjct: 57 DSLSCYDERFFFTGAKVLDLGTGAGFPGIPLAIMHDDLK---ITFFDSLQKRLTFLKEVT 113
Query: 119 QKTAAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ + + R +E D+++ RA+A L L+E++ P++
Sbjct: 114 TTLSYKQAEFLHGRAEEEAHKDIYREAFDIVTTRAVARLPVLVEWALPYVK 164
>gi|168214840|ref|ZP_02640465.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
gi|170713738|gb|EDT25920.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
Length = 239
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F ID+G+G GFPG+ +I V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMR---GDVEVTLLDSLNKRINFLNEVV 114
Query: 119 QKTAA-RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K + R ++ ++ + D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVETIHSRAEDGARKKELRESFDIATSRAVANMCVLSEFCIPYVK 165
>gi|148825234|ref|YP_001289987.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae PittEE]
gi|229846574|ref|ZP_04466682.1| glucose-inhibited division protein B [Haemophilus influenzae
7P49H1]
gi|166224592|sp|A5UA03|RSMG_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148715394|gb|ABQ97604.1| glucose-inhibited division protein B [Haemophilus influenzae
PittEE]
gi|229810667|gb|EEP46385.1| glucose-inhibited division protein B [Haemophilus influenzae
7P49H1]
Length = 203
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLAQANIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSPYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ + +
Sbjct: 117 ATPVLSRVEEYQPEDKFDGVLSRAFASLKDMTDWCYHLPKE 157
>gi|329891181|ref|ZP_08269524.1| 16S rRNA methyltransferase GidB [Brevundimonas diminuta ATCC 11568]
gi|328846482|gb|EGF96046.1| 16S rRNA methyltransferase GidB [Brevundimonas diminuta ATCC 11568]
Length = 206
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S + L+ F + + ++ +NLV T+ DFW RH DS ++ L P W DLG+G
Sbjct: 15 SDANIADLQAFLVMLTEANEVMNLVGPDTIPDFWNRHAWDSAQLLSLAPEAKTWADLGAG 74
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFPG++ +I L G V L++S K+ FL+ +V V R +E +
Sbjct: 75 AGFPGVVLAILLKGRPGAHVWLVDSLGKRCRFLQTIVDALDLPATVVNGRAEEQ---TIS 131
Query: 142 CDVISARALADLDTLLEYSFPW 163
D+++ARA+A +D LL Y+ P+
Sbjct: 132 VDIVTARAVAAMDKLLGYAQPY 153
>gi|242241379|ref|YP_002989560.1| methyltransferase GidB [Dickeya dadantii Ech703]
gi|242133436|gb|ACS87738.1| methyltransferase GidB [Dickeya dadantii Ech703]
Length = 206
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 6/159 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L L ++ + + L + L KW+K NL S E IRH+ DS V
Sbjct: 1 MLQKLDRLLQLAGMALTDKQKDLLIRYVGLLHKWNKAYNLTSVREPEQMLIRHIMDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +ID+G+G G PG+ SI L L++S K+ FLR V +
Sbjct: 60 VAPYLAGKRFIDVGTGPGLPGVPLSIVLPD---AHFVLLDSLGKRVRFLRQVQHELQLTN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R+++ P D + +RA A L ++++
Sbjct: 117 IEPVQSRVEDYPS-EPPFDGVISRAFASLQDMVDWCKHL 154
>gi|328945626|gb|EGG39777.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1087]
Length = 237
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ + E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 12 QQGIELTDRQKNQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQE 71
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G+G GFP + I ++ +++ + + + + + R
Sbjct: 72 LKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRINFLK--LLAEELALDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q T D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRTQFDLVTARAVARMQVLSELTIPYLK 165
>gi|327469077|gb|EGF14549.1| glucose inhibited division protein B [Streptococcus sanguinis
SK330]
Length = 237
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HP 70
++ ++ E ++ L ++W++KINL + + + +++H DS+
Sbjct: 10 LAQQGIELNDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDN 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G+G GFP + I ++ +++ + + L ++ + +
Sbjct: 70 QDRKLLDIGAGAGFPSLPMKIICPQMDVTIIDSLNKRINFLKLLAEELELD--KVHFYHG 127
Query: 131 RIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 128 RAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|288956854|ref|YP_003447195.1| glucose inhibited division protein B [Azospirillum sp. B510]
gi|288909162|dbj|BAI70651.1| glucose inhibited division protein B [Azospirillum sp. B510]
Length = 204
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPS 73
VSRETL++L + L KW KINLV ST+ D W RH DS + + L
Sbjct: 9 FQEASGVSRETLDRLIAYEGLLRKWQPKINLVGPSTLPDAWKRHFLDSAQLLPLLPEDTR 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ +DLGSG GFPG++ +I + V+LIES +K +FLR V + A V RI+
Sbjct: 69 VLVDLGSGAGFPGLVLAI----LGVPQVHLIESDVRKCAFLREVARVCKAPVTVHTRRIE 124
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ DV++ARALA L L ++ P++
Sbjct: 125 TVTGIE--ADVVTARALAPLADLFGWAHPFI 153
>gi|221236806|ref|YP_002519243.1| methyltransferase gidB [Caulobacter crescentus NA1000]
gi|239977586|sp|B8GW32|RSMG_CAUCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|239977587|sp|P0CAW6|RSMG_CAUCR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|220965979|gb|ACL97335.1| methyltransferase gidB [Caulobacter crescentus NA1000]
Length = 216
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +E L F L +W++ +NLV T+ +W RH DS ++ L P + W DLG+G
Sbjct: 25 TDAQIEDLTRFQTLLAEWNEVMNLVGPLTIATYWTRHALDSAQLIPLAPEATAWADLGAG 84
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PG++ +I L G V+L+ES K+ FL V + ++ R ++
Sbjct: 85 AGLPGVVLAILLKGRAGAKVHLVESMIKRCRFLEVVAKDLDLPVQIHNARAEDLK---LK 141
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D+++ARA A + LL ++ P+L
Sbjct: 142 VDIVTARACAPMTKLLGFAEPYLRN 166
>gi|16127984|ref|NP_422548.1| glucose inhibited division protein B [Caulobacter crescentus CB15]
gi|5174777|gb|AAD40694.1| GidB [Caulobacter crescentus CB15]
gi|13425528|gb|AAK25716.1| glucose inhibited division protein B, putative [Caulobacter
crescentus CB15]
Length = 205
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +E L F L +W++ +NLV T+ +W RH DS ++ L P + W DLG+G
Sbjct: 14 TDAQIEDLTRFQTLLAEWNEVMNLVGPLTIATYWTRHALDSAQLIPLAPEATAWADLGAG 73
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PG++ +I L G V+L+ES K+ FL V + ++ R ++
Sbjct: 74 AGLPGVVLAILLKGRAGAKVHLVESMIKRCRFLEVVAKDLDLPVQIHNARAEDLK---LK 130
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D+++ARA A + LL ++ P+L
Sbjct: 131 VDIVTARACAPMTKLLGFAEPYLRN 155
>gi|254472398|ref|ZP_05085798.1| methyltransferase GidB [Pseudovibrio sp. JE062]
gi|211958681|gb|EEA93881.1| methyltransferase GidB [Pseudovibrio sp. JE062]
Length = 206
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET E+L + L KW NL++ ST+ D W+RHV DS+++ + P WID G
Sbjct: 6 DVSRETFERLSIYVDLVRKWQPAQNLIAPSTMNDIWMRHVADSIQIQRSLPDARSWIDFG 65
Query: 80 SGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQ 137
SG GFPG++T++ L + G+V+++ES +KA+FLR V ++ KV A RI+
Sbjct: 66 SGAGFPGLVTAMLLKQEGDDGIVHMVESNQRKAAFLRTVAREAGCNVKVHAGRIEAVTKG 125
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +SARALA L L +S ++ +
Sbjct: 126 WEAPIEGVSARALASLQVLCGFSSQFVQR 154
>gi|56477078|ref|YP_158667.1| 16S rRNA methyltransferase GidB [Aromatoleum aromaticum EbN1]
gi|81821135|sp|Q5P4J7|RSMG_AZOSE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56313121|emb|CAI07766.1| Methyltransferase gidB, Glucose inhibited division protein B
[Aromatoleum aromaticum EbN1]
Length = 211
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 3/159 (1%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++S T +L F L KW++ NL S H+ DSL V
Sbjct: 6 LEQGLAELGLHLSPATQARLAAFATLLQKWNRVYNLTSIRDAGQVVTHHLLDSLAVLPHL 65
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAA-RGKV 127
+ D+GSGGG PGI ++ L V IE+ NKKASF + + V
Sbjct: 66 EGITTLADVGSGGGLPGIPLALAAPDCHPALAVTSIETVNKKASFQQQAKIELGLANFTV 125
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++ D + +RA ++L + + L
Sbjct: 126 VNERVENVRP-EAKFDAVISRAFSELLDFVGLTAHLLRP 163
>gi|114571501|ref|YP_758181.1| methyltransferase GidB [Maricaulis maris MCS10]
gi|122314958|sp|Q0AKF0|RSMG_MARMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114341963|gb|ABI67243.1| 16S rRNA m(7)G-527 methyltransferase [Maricaulis maris MCS10]
Length = 207
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQL 68
+ VSRETL+ E + L ++ + NLV ST++ FW RH DS ++ +
Sbjct: 1 MDRETFGRETGVSRETLDGFETWRALLVETNAHTNLVGRSTLDQFWARHAMDSYQLLEHV 60
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKV 127
+ DLG+G GFPGI ++ L + V L++S KK +FLR + A
Sbjct: 61 GADVTKIADLGAGAGFPGIALALGLRDRQQAAHVTLVDSVGKKVAFLRKTIAALALDAD- 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E D+I+ARA A L+ LL Y+ P L +
Sbjct: 120 ARSVRVETLDPAEGFDLITARAFAPLNKLLGYASPLLKNR 159
>gi|293391122|ref|ZP_06635456.1| glucose-inhibited division protein B [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951656|gb|EFE01775.1| glucose-inhibited division protein B [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 232
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + + + ++L L KW+K NL S +D ++H+ DS V
Sbjct: 23 MKTKLDSLLAQAKIQPNDQQKQQLIDLVNLLNKWNKAYNLTSVRDPQDMLVKHILDS-LV 81
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I + L++S K+ SF+R V+K
Sbjct: 82 VSPYLQGDRFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRISFIRNAVRKLGLTN 138
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + E+
Sbjct: 139 VKPVLSRVEEYQPEEKFDGVLSRAFASLKDMAEWCRHLPKP 179
>gi|148266436|ref|YP_001233142.1| methyltransferase GidB [Geobacter uraniireducens Rf4]
gi|189039394|sp|A5G9V1|RSMG_GEOUR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146399936|gb|ABQ28569.1| 16S rRNA m(7)G-527 methyltransferase [Geobacter uraniireducens Rf4]
Length = 219
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 5/164 (3%)
Query: 6 SNSILRANYL----LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
N + + +++ L + KWSKKINL + T E+ ++H D
Sbjct: 1 MNETAKKLLVTGATELGLHLTSAQLGNFYTYASELTKWSKKINLTAIKTDEEIALKHFVD 60
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + ++ +D+GSGGGFP I I L + V+ +E K + ++
Sbjct: 61 SLTLAKVVKNKGRLLDIGSGGGFPAIPLKIVLHDLHVMSVDAVEKKVIFQRHVARLLHLH 120
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ A D I +RA +D+ T + P L
Sbjct: 121 DFEAVHVRGE-ELAKSHAGQFDWIVSRAFSDIPTFAAMTLPLLK 163
>gi|332363406|gb|EGJ41191.1| glucose inhibited division protein B [Streptococcus sanguinis SK49]
Length = 237
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 12 QQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIVNQE 71
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G+G GFP + I ++ +++ + + + + + R
Sbjct: 72 LKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLK--LLAEELELDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|145638597|ref|ZP_01794206.1| glucose-inhibited division protein B [Haemophilus influenzae
PittII]
gi|145272192|gb|EDK12100.1| glucose-inhibited division protein B [Haemophilus influenzae
PittII]
gi|309750098|gb|ADO80082.1| 16S rRNA 7-methylguanosine methyltransferase GidB [Haemophilus
influenzae R2866]
Length = 203
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLAQANIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSLYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ +
Sbjct: 117 VTPVLSRVEEYQPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|329894822|ref|ZP_08270622.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC3088]
gi|328922716|gb|EGG30050.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC3088]
Length = 218
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S + +L + L KW+K NL + +++ ++H+ DSL V + +D+G+G
Sbjct: 23 SAQQQGQLLTYLSLLQKWNKAYNLTAIRDIDEMLVKHILDSLSVAPFCGAATSLLDIGAG 82
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G P ++ +I + V+ ++S KK F++ V + + + TT
Sbjct: 83 AGLPSVVLAIVYPGMR---VSGLDSNIKKTRFMQQVGYELNLTNFHVLHARADTADLSTT 139
Query: 142 CDVISARALADLDTLLEYSFPWL 164
D++ +RA + + + P L
Sbjct: 140 FDIVISRAFSSFSDFVTLALPRL 162
>gi|262273122|ref|ZP_06050939.1| ribosomal RNA small subunit methyltransferase G [Grimontia hollisae
CIP 101886]
gi|262222878|gb|EEY74186.1| ribosomal RNA small subunit methyltransferase G [Grimontia hollisae
CIP 101886]
Length = 204
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + +KL + + KW+K NL S D ++H+ DS+ V
Sbjct: 1 MKQRLAQLIEQAGMQIPADQQDKLIGYVEMLHKWNKAYNLTSVRDPNDMIVKHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI +I L++S K+ F+R V+ +
Sbjct: 60 VSEYLDGHHYIDVGTGPGLPGIPLAIINPVK---SFTLLDSLGKRIRFIRQVLHELKITN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A + ++ +
Sbjct: 117 VTAVQSRVEDFQPEQGFDGVLSRAFASMSDMVNWCHHL 154
>gi|322386902|ref|ZP_08060526.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
gi|321269184|gb|EFX52120.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
Length = 246
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 21 QQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQE 80
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G+G GFP + I ++ +++ + + + + + R
Sbjct: 81 LKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLK--LLAEELELDKVHFYHGRA 138
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 139 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 174
>gi|169343470|ref|ZP_02864470.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|182626391|ref|ZP_02954144.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
gi|169298422|gb|EDS80511.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|177908265|gb|EDT70818.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
Length = 239
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F ID+G+G GFPG+ +I E V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMR---EDVEVTLLDSLNKRINFLNEVV 114
Query: 119 QKTAA-RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K + R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVETIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|330831715|ref|YP_004394667.1| ribosomal RNA small subunit methyltransferase G [Aeromonas veronii
B565]
gi|328806851|gb|AEB52050.1| Ribosomal RNA small subunit methyltransferase G [Aeromonas veronii
B565]
Length = 211
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Query: 7 NSILRANYLL--NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + R N LL ++ +L L KW+K NL S + ++H+ DS
Sbjct: 3 NMLERLNGLLMQAGIVITDTQKSQLVQLVELLHKWNKAYNLTSVRDPDAMLVKHILDS-L 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V H + +ID+G+G G PG+ +I + L++S K+ +F+R V+Q+
Sbjct: 62 VVSPHLHGERFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRINFIRQVIQELGLT 118
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E Q D + +RA A L+ +L + ++
Sbjct: 119 NVTPVKSRVEEYQPEVGFDGVLSRAFASLEDMLSWCHHLPSEQ 161
>gi|168218048|ref|ZP_02643673.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
gi|182379950|gb|EDT77429.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
Length = 239
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F ID+G+G GFPG+ +I E V L++S NK+ +FL V+
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMR---EDVEVTLLDSLNKRINFLNEVI 114
Query: 119 QKTAA-RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K + R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVETIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|171315837|ref|ZP_02905068.1| methyltransferase GidB [Burkholderia ambifaria MEX-5]
gi|171099026|gb|EDT43811.1| methyltransferase GidB [Burkholderia ambifaria MEX-5]
Length = 228
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 15 EQMLVDGTAALDIALTDAQRNRLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIV 74
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++ A
Sbjct: 75 PHLRDRASARVLDVGSGGGLPGIVLAIVQPDWQVTLNDIVQKKSAFQTQMRAELK--LAN 132
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVELLRPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|237749325|ref|ZP_04579805.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes OXCC13]
gi|229380687|gb|EEO30778.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes OXCC13]
Length = 220
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 3/157 (1%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ + ++KL + L KW+ NL + + H+ DSL V
Sbjct: 18 LIDGIIALNIRLTNDQVKKLLDYLVLLDKWNSTYNLTAVRNPQAMLTYHLLDSLAVVPYL 77
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+GSGGG PG++ SI ++ V++I+ +KK +FL V +
Sbjct: 78 PETRKLLDVGSGGGLPGLVLSIVYPDMK---VSMIDIVHKKTAFLNQVKIELGLDNVTVY 134
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E ++ D I +RA A L + S L +
Sbjct: 135 TGRVEELEVEEPFDGIISRAFASLHDFVSLSAHLLSE 171
>gi|78064753|ref|YP_367522.1| glucose inhibited division protein [Burkholderia sp. 383]
gi|123569641|sp|Q39KY8|RSMG_BURS3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77965498|gb|ABB06878.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia sp. 383]
Length = 228
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV- 65
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 15 EQMLVEGTTALDLALTDAQHNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIV 74
Query: 66 -FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++ A
Sbjct: 75 SHLRGRASARVLDVGSGGGLPGIVLAIVEPDWQITLNDIVQKKSAFQTQMRAELK--LAN 132
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|254509067|ref|ZP_05121170.1| methyltransferase GidB [Vibrio parahaemolyticus 16]
gi|219548000|gb|EED25022.1| methyltransferase GidB [Vibrio parahaemolyticus 16]
Length = 210
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L VS +L + + KW+K NL S E+ ++H+ DS+ + H
Sbjct: 8 LDELIAQTDLEVSELQRNQLVGYVEMLNKWNKAYNLTSVRDPEEMLVKHILDSI-IVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I +L++S K+ F++ + + +
Sbjct: 67 LQGERFIDVGTGPGLPGIPLAIMCPDK---HFHLLDSLGKRIRFIKQALHELKIENVMPI 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A + ++ +
Sbjct: 124 QSRVEEFQPQEKFDAVLSRAFASMVDMVSWCHHL 157
>gi|167041017|ref|YP_001664002.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300913772|ref|ZP_07131089.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307725542|ref|YP_003905293.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
gi|193806453|sp|B0K5N2|RSMG_THEPX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166855257|gb|ABY93666.1| methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300890457|gb|EFK85602.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307582603|gb|ADN56002.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
Length = 240
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHP 70
L ++V E + +Y L L+W++K+NL + + + I+H DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 72 EEEKIIDVGTGAGFPCIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVK 167
>gi|253997704|ref|YP_003049768.1| methyltransferase GidB [Methylotenera mobilis JLW8]
gi|253984383|gb|ACT49241.1| methyltransferase GidB [Methylotenera mobilis JLW8]
Length = 225
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ E +KL + L KW++ NL + + H+ DSL V + +D
Sbjct: 29 GITLLPEQTQKLLDYVALIYKWNQVHNLTAVREPMEMVTLHILDSLSVLAHIECKRL-LD 87
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA- 135
+G+G G P I +I L ++ V I++ KK SF+R V + V RI+E
Sbjct: 88 VGAGAGLPSIPLAICLPELQ---VTSIDAVQKKVSFMRQVKAELGLANFSVIHGRIEEQT 144
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
+M DVI +RA +++ ++ + L
Sbjct: 145 VPSKEMPEKFDVIISRAFSEIALFIKLTKHLL 176
>gi|332363959|gb|EGJ41738.1| glucose inhibited division protein B [Streptococcus sanguinis
SK355]
Length = 237
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ E+ E ++ L + W++KINL + + + +++H DS+ +
Sbjct: 12 QQGIELTDRQKEQFERYFELLVAWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQE 71
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G+G GFP + I ++ +++ + + L ++ + + R
Sbjct: 72 LKLLDIGAGAGFPSLPMKIICPQLDVTIIDSLNKRINFLKLLAEELELD--KVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|325291445|ref|YP_004267626.1| Ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
gi|324966846|gb|ADY57625.1| Ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
Length = 251
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 19/157 (12%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--------- 75
L++ F L L W++++NL + + +D ++H DSL +
Sbjct: 25 QLDQFWKFGELLLDWNERMNLTAITEPKDVVVKHFLDSLISIPIIRDMEKNEKIMGSGKE 84
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACR 131
DLG+GGGFPGI I LS + + L++S K+ FL+ V+++ R R
Sbjct: 85 LMLADLGTGGGFPGIPLKIALSHLN---ITLMDSLLKRLGFLQTVIKELGLRKISTHHAR 141
Query: 132 IQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++A P D+++ARALADL LLEY+ P L
Sbjct: 142 AEDAGHDPAFRQQFDIVTARALADLPVLLEYTVPLLK 178
>gi|220921037|ref|YP_002496338.1| methyltransferase GidB [Methylobacterium nodulans ORS 2060]
gi|254766898|sp|B8IHZ7|RSMG_METNO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219945643|gb|ACL56035.1| methyltransferase GidB [Methylobacterium nodulans ORS 2060]
Length = 212
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET L+ + +W NLV ST+ + W RH+ DSL++ P + W+DLGS
Sbjct: 15 VSRETAAALDLYVAQLARWQTVKNLVGPSTLPEVWTRHIADSLQLLDAAPGATRWLDLGS 74
Query: 81 GGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
G G PG+I +I + V+L+ES +K +FL+ + T A ++ RI+
Sbjct: 75 GAGIPGLILAIAGREARPQMQVDLVESNARKGAFLQETARLTGASARIHVSRIESVIGRF 134
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
T +V+ ARALA L LL ++ P L
Sbjct: 135 TGVEVVCARALAPLPQLLAWTAPLLK 160
>gi|20809123|ref|NP_624294.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division [Thermoanaerobacter tengcongensis MB4]
gi|254479393|ref|ZP_05092726.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
gi|22095716|sp|Q8R6L0|RSMG_THETN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|20517803|gb|AAM25898.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Thermoanaerobacter
tengcongensis MB4]
gi|214034662|gb|EEB75403.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
Length = 239
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGG 83
+E + FY L L+W++K+NL + + E+ I+H DSL V + ID+G+G G
Sbjct: 25 VEHFQKFYSLLLEWNQKMNLTAITEEEEVVIKHFLDSLSVIKSGKIKGGEKVIDIGTGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMI 139
FPGI I I + L+E+ KK +FL ++ Q G +V R +E +
Sbjct: 85 FPGIPLKIVFPEIG---LTLLEASKKKVNFLNFLSQVLLFEGIEVIHGRAEELGKVERFR 141
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D+ +ARA+A L+ LLEY+ P++
Sbjct: 142 EKFDIATARAVAPLNILLEYAVPFVR 167
>gi|107024503|ref|YP_622830.1| 16S rRNA methyltransferase GidB [Burkholderia cenocepacia AU 1054]
gi|116688118|ref|YP_833741.1| methyltransferase GidB [Burkholderia cenocepacia HI2424]
gi|122978515|sp|Q1BR98|RSMG_BURCA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039488|sp|A0K2X1|RSMG_BURCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|105894692|gb|ABF77857.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia cenocepacia AU
1054]
gi|116646207|gb|ABK06848.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia cenocepacia
HI2424]
Length = 228
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 7/163 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L ++ +L + L KW+ NL + I+H+ DSL +
Sbjct: 17 MLVEGTAALDLTLTDTQRNQLLDYVALLGKWNAVYNLTAIRDPMQMLIQHILDSLSIVPH 76
Query: 69 --HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+GSGGG PGI+ +I + L ++++ K+ + +R ++ A
Sbjct: 77 LRGRTSARVLDVGSGGGLPGIVLAIVEPGWQVTLNDIVQKKSAFQTQMRAELK--LANLS 134
Query: 127 VFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 135 VVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|324993451|gb|EGC25371.1| glucose inhibited division protein B [Streptococcus sanguinis
SK405]
gi|327461725|gb|EGF08056.1| glucose inhibited division protein B [Streptococcus sanguinis SK1]
gi|327473446|gb|EGF18866.1| glucose inhibited division protein B [Streptococcus sanguinis
SK408]
gi|327489010|gb|EGF20805.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1058]
Length = 237
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++ ++ E+++ L ++W++KINL + + + +++H DS+ +
Sbjct: 10 LAQQGIELTDRQKDQFEHYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQALIDN 69
Query: 74 IW---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G+G GFP + I ++ +++ + + L ++ + +
Sbjct: 70 QELKLLDIGAGAGFPSLPMKIIYPQLDVTIIDSLNKRINFLKLLAEELELD--KVHFYHG 127
Query: 131 RIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D+++ARA+A + L E + P+L
Sbjct: 128 RAEDFAQNKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|229844352|ref|ZP_04464492.1| glucose-inhibited division protein B [Haemophilus influenzae
6P18H1]
gi|229812601|gb|EEP48290.1| glucose-inhibited division protein B [Haemophilus influenzae
6P18H1]
Length = 203
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLAQANIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSPYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLIN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E Q D + +RA A L + ++ +
Sbjct: 117 VIPVLSRVEEYQPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|18311635|ref|NP_563569.1| glucose-inhibited division protein B [Clostridium perfringens str.
13]
gi|110799944|ref|YP_697343.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|168211560|ref|ZP_02637185.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
gi|20177885|sp|Q8XH32|RSMG_CLOPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123049536|sp|Q0TLZ7|RSMG_CLOP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|18146319|dbj|BAB82359.1| glucose-inhibited division protein [Clostridium perfringens str.
13]
gi|110674591|gb|ABG83578.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|170710444|gb|EDT22626.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
Length = 239
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F ID+G+G GFPG+ +I E V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMR---EDVEVTLLDSLNKRINFLNEVV 114
Query: 119 QKTAA-RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K K R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVKTIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|310765905|gb|ADP10855.1| 16S rRNA methyltransferase GidB [Erwinia sp. Ejp617]
Length = 208
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
Query: 14 YLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
LL +S ++L + + KW+K NL S + +RH+ DS+ V + H
Sbjct: 7 ILLKSAGIPLSDSQKQQLVGYVGMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLV 65
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ID+G+G G PG+ +I L++S K+ FL+ V
Sbjct: 66 GDRFIDVGTGPGLPGVPLAIVRP---QAHFTLLDSLGKRVRFLKQVQHDLKLANITPVQS 122
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A L ++ +
Sbjct: 123 RVEDFAG-EPPFDGVISRAFASLTDMVSWCHHL 154
>gi|322513171|ref|ZP_08066302.1| glucose inhibited division protein B [Actinobacillus ureae ATCC
25976]
gi|322121067|gb|EFX92891.1| glucose inhibited division protein B [Actinobacillus ureae ATCC
25976]
Length = 203
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + N++ + E+L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKQKLDRLLVQAQINLTDQQKEQLVGFVRLLGKWNKAYNLTSVRNPDEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSEHLQGEKFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E T D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEY--TEQTFDGVLSRAFASLNDMVDWCYHL 153
>gi|225181153|ref|ZP_03734599.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
gi|225168122|gb|EEG76927.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
Length = 235
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWI 76
+ E ++ E +Y ++ ++++NL + + I+H DSL V + +
Sbjct: 13 NITLPPEAPDRFEMYYRQLVEANRQVNLTRITEPAEVMIKHFLDSLEVLSACREFKGPLL 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+G+G G PGI I I + L++S K+ SFL+ +V V R ++
Sbjct: 73 DVGTGAGLPGIPLKIACPQI---SLTLLDSSKKRVSFLKDLVSALELENVTVIHGRAEDY 129
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +RA+A L+ L E P++ Q
Sbjct: 130 ARQDDYREQFPFVVSRAVARLNVLAELCLPFVSQ 163
>gi|168207745|ref|ZP_02633750.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
gi|170660931|gb|EDT13614.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
Length = 239
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F ID+G+G GFPG+ +I E V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMR---EDVEVTLLDSLNKRINFLNEVV 114
Query: 119 QKTAA-RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K + R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVETIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|127514780|ref|YP_001095977.1| glucose-inhibited division protein B [Shewanella loihica PV-4]
gi|126640075|gb|ABO25718.1| methyltransferase GidB [Shewanella loihica PV-4]
Length = 234
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + ++L F + KW+K NL S E IRH+ DSL H
Sbjct: 33 LDSYLADMQMTATPKQKQQLLDFVAMLAKWNKAYNLTSVRDPEQMLIRHIMDSLAA-SPH 91
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I E L++S K+ F + V + A
Sbjct: 92 LVGERFIDVGTGPGLPGIPLAIMNPDKE---FVLLDSLGKRIRFQKQVQFELAIGNISSV 148
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA Q D + +RA A + +L++
Sbjct: 149 ESRVEAYQPEEKFDGVLSRAFASIQDMLQWCHHLPKP 185
>gi|85060384|ref|YP_456086.1| glucose-inhibited division protein B [Sodalis glossinidius str.
'morsitans']
gi|123518618|sp|Q2NQ94|RSMG_SODGM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84780904|dbj|BAE75681.1| glucose inhibited division protein B [Sodalis glossinidius str.
'morsitans']
Length = 206
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ EKL + L KW+K NL S + E +RH+ DS+ V H +ID+G+
Sbjct: 16 LTSAQKEKLLGYVALLHKWNKAYNLTSVRSPEQMLVRHIMDSI-VVNPHLRGDRFIDVGT 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PGI +I L++S K+ FLR V + E+
Sbjct: 75 GPGLPGIPLAIVRPD---AHFTLLDSLGKRICFLRQVQHELGLDNITAVQSRVESFAPPA 131
Query: 141 TCDVISARALADLDTLLEYSFPWLYQKK 168
D + +RA A L +L + +++
Sbjct: 132 GFDGVISRAFASLGDMLTWCAALPRKEE 159
>gi|73663751|ref|YP_302532.1| 16S rRNA methyltransferase GidB [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|123641435|sp|Q49UI6|RSMG_STAS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|72496266|dbj|BAE19587.1| glucose inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 239
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ +S + ++ + +Y + ++W++K+NL S + + +++H DS+
Sbjct: 13 HGIELSDKQQQQFQTYYQMLVEWNEKMNLTSITEEHEVYLKHFYDSIATSFYTDLTKELT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP I I +++ V +++S NK+ FL + + R +
Sbjct: 73 ICDVGAGAGFPSIPLKIIFPNLK---VTIVDSLNKRIHFLNQLAEALELDNVSFVHDRAE 129
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A L L E P + +
Sbjct: 130 TYGKGDYRASYDIVTARAVARLSVLSELCLPLVKK 164
>gi|326512668|dbj|BAJ99689.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
+S + ++ + + L W++++NL + + + RHV DSL V
Sbjct: 48 LSPQQQRQVSLYVDVLLDWNQRMNLTTVTDEAEVMTRHVVDSLAVLPPLERAYTSRGGDI 107
Query: 76 -----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+D+GSG G PG+I ++ S + L+ES K+ +FL + V+ V
Sbjct: 108 SGISLVDVGSGAGLPGLILAVARPSWK---FTLLESMRKRCTFLEHAVEVMGLSNVDVVC 164
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R + A + + DV +ARA+A+L L EY P +
Sbjct: 165 DRAENAGQNHDLRESFDVAAARAVAELKILAEYCLPLVR 203
>gi|83944971|ref|ZP_00957337.1| glucose inhibited division protein B, putative [Oceanicaulis
alexandrii HTCC2633]
gi|83851753|gb|EAP89608.1| glucose inhibited division protein B, putative [Oceanicaulis
alexandrii HTCC2633]
Length = 212
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VSRETLE+ E + L + S NLV T+ +FW RH DS +VF+L P W DLG
Sbjct: 16 GVSRETLERFETWRRLLEETSAHTNLVGRGTLTEFWHRHALDSWQVFELMPEARRWADLG 75
Query: 80 SGGGFPGIITSIQLSSIE--GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G GFPG+ + L G V +++S KK +F+ V+++T A A R++
Sbjct: 76 AGAGFPGLAIAFALMERHAGKGHVLMVDSVAKKMAFVNQVIRETKAPAIARADRVESIHP 135
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV++ARA+A L LL Y P++ +
Sbjct: 136 VPE-VDVVTARAMAPLGKLLGYVHPFVDK 163
>gi|149911788|ref|ZP_01900392.1| glucose-inhibited division protein B [Moritella sp. PE36]
gi|149805134|gb|EDM65156.1| glucose-inhibited division protein B [Moritella sp. PE36]
Length = 206
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ ++L L KW+K NL S E+ I+H+ DS V +
Sbjct: 5 LDALLAQTSLVVTDTQKQQLVALVNLLHKWNKAYNLTSVRDPENMLIKHIMDS-LVVSPY 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PG+ +I E L++S K+ F+ V +
Sbjct: 64 LEGERFIDVGTGPGLPGLPLAIMNPDKE---FVLLDSLGKRIRFVTQAVHELKLTNVTPV 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E D + +RA A L+ +L +
Sbjct: 121 QSRVEEYHPEIKFDGVLSRAFASLEDMLHWCKHLPKP 157
>gi|168187285|ref|ZP_02621920.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
gi|169294773|gb|EDS76906.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
Length = 243
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 6 SNSILRANYLLN------TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
NS +LN + + ++ + L W++K+NL + + E+ +H
Sbjct: 1 MNSEKIFYDILNIAAENVDLEFNDKKYDQFIQYKDLLKDWNEKVNLTAITEDEEIIKKHF 60
Query: 60 EDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+++FQ + ID+G+GGGFPGI I + L++ ++ + +
Sbjct: 61 IDSMKIFQFEYLRKANKIIDIGTGGGFPGIPIKIMRPDVNMVLLDSLKKRINVLDDILTN 120
Query: 118 VQKTAARGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R +E P+ D + +RA+A+L +L E+ P++
Sbjct: 121 IGIN--DVESIHGRAEEFAKNPKYREKFDAVVSRAVANLASLSEFCLPYVK 169
>gi|261491716|ref|ZP_05988296.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495534|ref|ZP_05991981.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308868|gb|EEY10124.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261312555|gb|EEY13678.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 204
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L N++ + E+L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MLAKLNRLLAQAEINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSRHLQGETFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGIKN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVQSRVEEY--TESQFDGVLSRAFASLNDMIDWCYHL 153
>gi|110803383|ref|YP_699902.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
gi|123145823|sp|Q0SPQ5|RSMG_CLOPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110683884|gb|ABG87254.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
Length = 239
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F ID+G+G GFPG+ +I E V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMR---EDVEVTLLDSLNKRINFLNEVV 114
Query: 119 QKTAA-RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K A + R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLALKNVETIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|117620993|ref|YP_858689.1| 16S rRNA methyltransferase GidB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166224342|sp|A0KQY8|RSMG_AERHH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117562400|gb|ABK39348.1| methyltransferase GidB [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 214
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ +L L KW+K NL S + ++H+ DS V H + +ID+G+
Sbjct: 16 ITDTQKTQLVQLVELLHKWNKAYNLTSVRDPDAMLVKHILDS-LVVSQHLHGERFIDVGT 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PG+ +I + L++S K+ +F+R V+ + E Q
Sbjct: 75 GPGLPGLPLAIINPDKQ---FVLLDSLGKRINFIRQVILELGLTNVTPVKSRVEEYQPEV 131
Query: 141 TCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ +L +
Sbjct: 132 GFDGVLSRAFASLEDMLSWCHHL 154
>gi|241766012|ref|ZP_04763933.1| methyltransferase GidB [Acidovorax delafieldii 2AN]
gi|241364011|gb|EER59267.1| methyltransferase GidB [Acidovorax delafieldii 2AN]
Length = 225
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 16/155 (10%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+ +++++ + +L F L KW+K NL + ++ H+ DSL
Sbjct: 22 SLDLNQDQITRLMEFLALLQKWNKVYNLTAVRNPQEMVTHHLLDSLAAVVPLRRHVATLG 81
Query: 76 ---------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSGGG PG++ +I ++ V+ +++ KKA+F++ R
Sbjct: 82 QGGAQAVRLLDVGSGGGLPGVVFAICCPGVD---VSCVDTVGKKAAFIQQAAVALKLRN- 137
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ T D+IS RA A L + +S
Sbjct: 138 -LHGVHARVETLTTPFDIISCRAFASLPDFVAWSR 171
>gi|182678270|ref|YP_001832416.1| methyltransferase GidB [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634153|gb|ACB94927.1| methyltransferase GidB [Beijerinckia indica subsp. indica ATCC
9039]
Length = 221
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 63/139 (45%), Positives = 87/139 (62%), Gaps = 1/139 (0%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E+L + L KW K INLV+ ST++ W RH DSL+V + P W+DLGSGGGFPG
Sbjct: 35 ERLGLYATLLGKWQKTINLVAPSTLDHVWSRHFADSLQVQEALPQAHHWVDLGSGGGFPG 94
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT-CDVI 145
++T+I L+ + V+LIES +K +FLR V ++T A+ V RI+ +I + +
Sbjct: 95 LVTAIVLADVPEACVHLIESDQRKCAFLREVARETGAKAIVHCGRIEAVASIIEDGIEAV 154
Query: 146 SARALADLDTLLEYSFPWL 164
SARALA L LL Y+ PWL
Sbjct: 155 SARALAPLVNLLAYAEPWL 173
>gi|254360967|ref|ZP_04977113.1| glucose inhibited division protein B [Mannheimia haemolytica
PHL213]
gi|153092446|gb|EDN73509.1| glucose inhibited division protein B [Mannheimia haemolytica
PHL213]
Length = 204
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L N++ + E+L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MLAKLNRLLAQAEINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSRHLQGETFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGIKN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVQSRVEEY--TESQFDGVLSRAFASLNDMIDWCYHL 153
>gi|227514197|ref|ZP_03944246.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
gi|227087429|gb|EEI22741.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
Length = 253
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 13/171 (7%)
Query: 2 KYCDSN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
K D N R L + ++ + + +Y L ++ ++ +NL + + + +++H
Sbjct: 5 KEKDMNPEEFRQALLDHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFY 64
Query: 61 DSLRVFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL +P D+G+G GFP + I +E V +++S NK+ +FL
Sbjct: 65 DSLTGAFAYPKLQSQALTLCDIGAGAGFPSLPLKIAFPQLE---VTIVDSLNKRINFLAD 121
Query: 117 VVQKTAAR-GKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFP 162
+ + R + D+++ARA+A L L E P
Sbjct: 122 LCDDLGLTGVHLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLP 172
>gi|256751462|ref|ZP_05492340.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
gi|256749681|gb|EEU62707.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
Length = 240
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHP 70
L ++V E + +Y L L+W++K+NL + + + I+H DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 72 EEEKIIDVGTGAGFPCIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSMARAVAPLNILLEYTLPFVK 167
>gi|262372458|ref|ZP_06065737.1| 16S rRNA methyltransferase GidB [Acinetobacter junii SH205]
gi|262312483|gb|EEY93568.1| 16S rRNA methyltransferase GidB [Acinetobacter junii SH205]
Length = 210
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ N+S E L L + + W+K NL + ++ ++H+ DSL +
Sbjct: 8 LKQGSQALGLNLSEEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILNDL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + +D+G+GGG PG+I ++ + L++S KK FL+ + + +
Sbjct: 68 PKGRL-LDVGTGGGMPGMIIALCQPERD---CVLLDSNGKKIRFLKQFIADLNLKNVIAV 123
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + DVI++RA A L ++ + P++++K
Sbjct: 124 QTRVENEDSINELGQFDVITSRAFASLTDFVDAAQPYMHEK 164
>gi|309972357|gb|ADO95558.1| 16S rRNA 7-methylguanosine methyltransferase GidB [Haemophilus
influenzae R2846]
Length = 203
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + +S + +++L L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MKAKLVSLLAQANIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 60 VSPYLQGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELGLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ +
Sbjct: 117 VTPVLSRVEEYQPEDKFDGVLSRAFALLKDMTDWCHHLPKE 157
>gi|94501612|ref|ZP_01308129.1| glucose-inhibited division protein B [Oceanobacter sp. RED65]
gi|94426295|gb|EAT11286.1| glucose-inhibited division protein B [Oceanobacter sp. RED65]
Length = 205
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L+ +S + +E L ++ L KW+K NL + +D RH+ DSL +
Sbjct: 3 QALLKTGLKKLQIELSDDKIELLLAYHGLLAKWNKAYNLTAVRDPQDMIGRHLLDSLSIL 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+D+G+G G PGI +I + + L++S KK FL +
Sbjct: 63 PHVEGE-RILDVGTGPGLPGIPLAICHPEKD---ITLLDSNGKKTRFLTQSKIELKLSNI 118
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
RI++ + D I++RA A L+ ++ S L
Sbjct: 119 TPVQSRIEKYEAPL--FDAITSRAFATLEDMVNGSIHLLK 156
>gi|160946573|ref|ZP_02093776.1| hypothetical protein PEPMIC_00531 [Parvimonas micra ATCC 33270]
gi|158446957|gb|EDP23952.1| hypothetical protein PEPMIC_00531 [Parvimonas micra ATCC 33270]
Length = 244
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
L++ +S LEK E + L L+W++KINL + + E +H D L + +
Sbjct: 11 LKSLTQKENIILSDIALEKFEIYRKLILEWNEKINLTAITDEEAMNTKHFLDCLLLTKTG 70
Query: 69 -HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+D+G+G GFP I + +++ V +++S NK+ FL V++ K
Sbjct: 71 LFDDDKSILDVGTGAGFPAIPLKLYNENLK---VTMLDSLNKRIKFLNIVIEDLNLKNIK 127
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E + D++S+RA+A L LLE++ P+L
Sbjct: 128 AIHGRAEEVGRKEGFRESFDIVSSRAVASLSLLLEFTIPFLK 169
>gi|255008944|ref|ZP_05281070.1| 16S rRNA methyltransferase GidB [Bacteroides fragilis 3_1_12]
Length = 224
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 20 ELLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRF 79
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +DLG+GGGFPGI +I + LV+ I K + A+ + +
Sbjct: 80 RPGSKVMDLGTGGGFPGIPLAILFPDTKFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 137
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R +E Q D + +RA+ L L++
Sbjct: 138 ARAEEEKQT---FDFVVSRAVMPLADLIKI 164
>gi|258507237|ref|YP_003169988.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus GG]
gi|258538424|ref|YP_003172923.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus Lc 705]
gi|257147164|emb|CAR86137.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus GG]
gi|257150100|emb|CAR89072.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus Lc 705]
gi|259648603|dbj|BAI40765.1| methyltransferase GidB [Lactobacillus rhamnosus GG]
Length = 243
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL V +L P
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPKLQSQP 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 LSLCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQ----EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A L+ L E P Q
Sbjct: 130 AETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQ 168
>gi|229550864|ref|ZP_04439589.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
gi|229315689|gb|EEN81662.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
Length = 256
Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL V +L P
Sbjct: 26 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPKLQSQP 85
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 86 LSLCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 142
Query: 132 IQ----EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A L+ L E P Q
Sbjct: 143 AETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQ 181
>gi|199597912|ref|ZP_03211337.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
gi|199591169|gb|EDY99250.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
Length = 243
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL V +L P
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQSQP 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 LSLCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQ----EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A L+ L E P Q
Sbjct: 130 AETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQ 168
>gi|307265445|ref|ZP_07547001.1| methyltransferase GidB [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919559|gb|EFN49777.1| methyltransferase GidB [Thermoanaerobacter wiegelii Rt8.B1]
Length = 240
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHP 70
L ++V E + +Y L L+W++K+NL + + + I+H+ DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHLLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 72 GEEKIIDVGTGAGFPSIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWL 164
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSVARAVAPLNVLLEYTLPFV 166
>gi|253681207|ref|ZP_04862005.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
gi|253562445|gb|EES91896.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
Length = 243
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 6 SNSILRANYLLN------TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
NS + +LN + + + + L W+ K+NL + + ++ +H
Sbjct: 1 MNSENQYYDILNVAASSMGLEFNDKKYNQFIKYKDLLKDWNSKVNLTAITEDKEIIKKHF 60
Query: 60 EDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+++FQ + ID+G+GGGFPGI I ++ L++ + + + +
Sbjct: 61 IDSMKIFQFEYLKKANRIIDIGTGGGFPGIPMKIIRPEVKMVLLDSLRKRINVLDDI--L 118
Query: 118 VQKTAARGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R +E P+ D + +RA+A+L L E+ P++
Sbjct: 119 CKIGIDDVETIHGRAEEFSRNPKYREQFDAVVSRAVANLAALSEFCLPYVK 169
>gi|157377626|ref|YP_001476226.1| glucose-inhibited division protein B [Shewanella sediminis HAW-EB3]
gi|189040718|sp|A8G1X5|RSMG_SHESH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157320000|gb|ABV39098.1| methyltransferase GidB [Shewanella sediminis HAW-EB3]
Length = 206
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + ++L F + KW+K NL S + IRH+ DSL V H
Sbjct: 6 LDEYLAEMNLSATEQQKKQLIGFVEMLNKWNKAYNLTSIRDPQQMLIRHIMDSLAV-SPH 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F + V + +
Sbjct: 65 LVGERFIDVGTGPGLPGIPLAIMNPDK---TFVLLDSLGKRIRFQKQVQHELGIKNISSV 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q T D + +RA A ++ +L +
Sbjct: 122 ESRVEAYQPETKFDGVLSRAFASIEDMLHWCHHL 155
>gi|32034341|ref|ZP_00134541.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209118|ref|YP_001054343.1| 16S rRNA methyltransferase GidB [Actinobacillus pleuropneumoniae
L20]
gi|166224341|sp|A3N2V2|RSMG_ACTP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126097910|gb|ABN74738.1| methyltransferase GidB [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 205
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L N++ + E+L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MRQKLDRLLEQAQINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H + +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSEHLQGNNFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYKEQT--FDGVLSRAFASLNDMVDWCYHL 153
>gi|37785810|gb|AAR02617.1| GidB [Aeromonas hydrophila]
Length = 208
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ +L L KW+K NL S + ++H+ DS V H + +ID+G+
Sbjct: 16 ITETQKTQLVRLVELLHKWNKAYNLTSVRDPDAMLVKHILDS-LVVSRHLHGERFIDVGT 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PG+ +I + L++S K+ +F+R V+ + E Q
Sbjct: 75 GPGLPGLPLAIINPDKQ---FVLLDSLGKRINFIRQVILELGLANVTPVKSRVEEYQPEV 131
Query: 141 TCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ +L +
Sbjct: 132 GFDGVLSRAFASLEDMLGWCHHL 154
>gi|167038667|ref|YP_001666245.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320117059|ref|YP_004187218.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|193806452|sp|B0K8H7|RSMG_THEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166857501|gb|ABY95909.1| methyltransferase GidB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319930150|gb|ADV80835.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 240
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHP 70
L ++V E + +Y L L+W++K+NL + + + I+H DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 72 EEEKIIDVGTGAGFPCIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSMARAVAPLNILLEYTLPFVK 167
>gi|118444066|ref|YP_876981.1| 16S rRNA methyltransferase GidB [Clostridium novyi NT]
gi|189039496|sp|A0PX79|RSMG_CLONN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118134522|gb|ABK61566.1| glucose-inhibited division protein B [Clostridium novyi NT]
Length = 243
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 6 SNSILRANYLLN------TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
NS +LN + + + + L W+ K+NL + + E+ +H
Sbjct: 1 MNSEKIFYDILNVAAENVDLEFNDKKYNQFIQYKDLLKDWNGKVNLTAITEDEEIIKKHF 60
Query: 60 EDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+++FQ + ID+G+GGGFPGI I + + L++S K+ + L +
Sbjct: 61 IDSMKIFQFEYLRKANKIIDIGTGGGFPGIPMKIMRPDAD---IVLLDSLKKRINVLDDI 117
Query: 118 VQKTAAR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ K + R +E P+ D + +RA+A+L +L E+ P++
Sbjct: 118 LNKIGINDVETIHGRAEEFAKNPKYREKFDAVVSRAVANLASLSEFCLPYVK 169
>gi|212697396|ref|ZP_03305524.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325846390|ref|ZP_08169359.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|212675588|gb|EEB35195.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325481574|gb|EGC84614.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 209
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K E + + ++ +KK NL + + I+H EDSL + +D+GSG GFP
Sbjct: 1 MDKFEKYGQMLIETNKKFNLTTIDEPDQIKIKHFEDSLTIKSYINEGMKVLDIGSGAGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMITTCD 143
GI I+ + + LI+S NKK +F+ V+++ + R ++ A + D
Sbjct: 61 GIPLRIE----KDFDLTLIDSVNKKVNFMNQVIEELDLKNTRAIHVRAEDFAKEHREEFD 116
Query: 144 VISARALADLDTLLEYSFPWLY 165
++ +RA+A+L TL EY+ P+L
Sbjct: 117 MVISRAVANLSTLSEYALPFLK 138
>gi|303252045|ref|ZP_07338215.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248703|ref|ZP_07530716.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302649109|gb|EFL79295.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306854630|gb|EFM86820.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 205
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L N++ + E+L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MRQKLDRLLEQAQINLTDQQKEQLVDFVRLLDKWNKAYNLTSVRNPDEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H + +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSEHLQGNNFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYKEQT--FDGVLSRAFASLNDMVDWCYHL 153
>gi|83950773|ref|ZP_00959506.1| glucose-inhibited division protein B [Roseovarius nubinhibens ISM]
gi|83838672|gb|EAP77968.1| glucose-inhibited division protein B [Roseovarius nubinhibens ISM]
Length = 200
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 5/150 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DL 78
NVSRET E+LE + L KW+ KINLV+ +++ + RH EDS ++ P D+
Sbjct: 5 NVSRETEERLEIYAALLEKWNPKINLVARASLNEAGRRHFEDSAQIMLHAPTQISHWVDI 64
Query: 79 GSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ +I S +G LIES +K +FLR V ++T+ V + RI++A
Sbjct: 65 GSGGGFPGLVAAILAQESHKGAKFTLIESDQRKCAFLRSVSRETSVPVTVLSERIEQAAP 124
Query: 138 MITTCDVISARALADLDTLLEY-SFPWLYQ 166
DV+SARALA L LL + + +
Sbjct: 125 QE--ADVLSARALAPLTDLLGFATRHMVPD 152
>gi|126734410|ref|ZP_01750157.1| glucose-inhibited division protein B [Roseobacter sp. CCS2]
gi|126717276|gb|EBA14140.1| glucose-inhibited division protein B [Roseobacter sp. CCS2]
Length = 206
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 65/150 (43%), Positives = 87/150 (58%), Gaps = 4/150 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
NVSRET++ LE F L KW+ KINL++SSTV W RH+ DS ++++ P
Sbjct: 7 GINVSRETIDNLEAFGTLVTKWTPKINLIASSTVATLWDRHIIDSAQIYRFAPKDYENWV 66
Query: 77 DLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+GSGGGFPGII +I S++ LIES +KA FLR ++ R V A RI+
Sbjct: 67 DMGSGGGFPGIIMAIMAKSLQPDARFTLIESDQRKAIFLRTAARECGLRVDVIAQRIESV 126
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
P+ + DV+SARAL L LL + L
Sbjct: 127 PKQL--ADVVSARALTALSGLLPAAERHLK 154
>gi|326390370|ref|ZP_08211929.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
gi|325993647|gb|EGD52080.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
Length = 240
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHP 70
L ++V E + +Y L L+W++K+NL + + + I+H+ DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHLLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L+++ K+ +FL V+ K ++
Sbjct: 72 GDEKIIDVGTGAGFPSIPLKIVFPKLKA---TLLDASKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWL 164
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSVARAVAPLNVLLEYTLPFV 166
>gi|313893548|ref|ZP_07827118.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
gi|313441991|gb|EFR60413.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
Length = 250
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLG 79
+ E + +Y ++ +K +NL + +++ ++H+ DSL + + ID+G
Sbjct: 31 TEEQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDSNIIKPGMSIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--AP 136
+G GFPGI +I S++ V L +S K+ +FL V+ + R ++
Sbjct: 91 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLTFLESVMDELNLTNCTTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKE 177
>gi|269926956|ref|YP_003323579.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
gi|269790616|gb|ACZ42757.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
Length = 251
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------PY 71
V + LE L +WS K N+ + + + +H+ DSL V H
Sbjct: 24 GIEVEEDQLELFLALADLVNEWSYKYNITAIRSRREILTKHIIDSLSVAIGHWQINDGKV 83
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P+ +D+GSG GFP + +I I V +E+ KKASF+ + V R
Sbjct: 84 PANLLDVGSGAGFPSLPIAIAFPDIN---VTALEAIRKKASFIAAASESLGLNVTVLNQR 140
Query: 132 IQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ P + +++ ARA+A + TLLEY P++
Sbjct: 141 AEVAAHLPDLREAFELVVARAVAYMPTLLEYCLPFVR 177
>gi|145301182|ref|YP_001144023.1| 16S rRNA methyltransferase GidB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166224343|sp|A4STQ3|RSMG_AERS4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|142853954|gb|ABO92275.1| glucose inhibited division protein B [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 208
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 4/147 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ +L L KW+K NL S + ++H+ DS V H + +ID+G+
Sbjct: 16 ITDTQKTQLVQLVELLHKWNKAYNLTSVRDPDAMLVKHILDS-LVVSPHLHGERFIDVGT 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PG+ +I + L++S K+ +F+R V+Q E Q
Sbjct: 75 GPGLPGLPLAIINPDKQ---FVLLDSLGKRINFIRQVIQVLGLTNVTPVKSRVEEYQPDV 131
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A L+ +L + ++
Sbjct: 132 GFDCVLSRAFASLEDMLSWCHHLPSEQ 158
>gi|240256423|ref|NP_568720.4| unknown protein [Arabidopsis thaliana]
gi|332008514|gb|AED95897.1| glucose inhibited division protein B [Arabidopsis thaliana]
Length = 292
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS------- 73
+S +++ + L+W++K+NL ++ ++ RH+EDSL +
Sbjct: 63 LSSSQQDQIHLYVDTLLQWNQKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLHSSDL 122
Query: 74 ----IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
ID+GSG G PG++ +I V L+ES NK+ FL +VV T +
Sbjct: 123 FDHINLIDVGSGAGLPGLVLAIACPDWR---VTLLESINKRCVFLEHVVNVTGLTNVTIV 179
Query: 129 ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R + DV ARA+A++ L EY P +
Sbjct: 180 RGRAESCGHDVMYREKFDVAIARAVAEMRVLAEYCLPLVR 219
>gi|222152552|ref|YP_002561727.1| 16S rRNA methyltransferase GidB [Streptococcus uberis 0140J]
gi|254766906|sp|B9DTP3|RSMG_STRU0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222113363|emb|CAR40979.1| methyltransferase GidB [Streptococcus uberis 0140J]
Length = 237
Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ +++ E+ + ++ ++W+ KINL + + D +++H DS+
Sbjct: 4 EVFYKALEDFDIHLNDFQKEQFDIYFQTLVEWNDKINLTAITEKNDVYLKHFYDSIAPIL 63
Query: 68 LHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ I D+G+G GFP I I ++ + +I+S NK+ +FL+ + +
Sbjct: 64 HGYIKNEPIKLLDIGAGAGFPSIPMKIIYPQLD---ITIIDSLNKRITFLKQLSEVLHLE 120
Query: 125 -GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
F R ++ D+++ARA+A + L E + P+L
Sbjct: 121 GVHFFHGRAEDFGQDINFRAQFDIVTARAVARMQILSELTIPFLK 165
>gi|304439123|ref|ZP_07399042.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372482|gb|EFM26069.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 234
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Query: 9 ILRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ R LL + E KL+ + + L+W+ +NL + + E+ ++H D L +F
Sbjct: 1 MTRLEELLKEFEIEFDSEKNNKLQKYKEILLEWNSFMNLTAITDDEEIDVKHFLDCLTIF 60
Query: 67 QLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ ID+G+G GFPGI +I+ +E V L++S NK+ FL VV++T
Sbjct: 61 KTGELDGKKSVIDVGTGAGFPGIPMAIKNPDLE---VTLLDSLNKRIKFLNKVVEETDLK 117
Query: 124 RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R +E + DV +RA+A++ TL EY+ P++
Sbjct: 118 NVTTYHGRAEEFARKKEFRDAFDVSVSRAVANMATLTEYTLPYVKP 163
>gi|209544084|ref|YP_002276313.1| methyltransferase GidB [Gluconacetobacter diazotrophicus PAl 5]
gi|209531761|gb|ACI51698.1| methyltransferase GidB [Gluconacetobacter diazotrophicus PAl 5]
Length = 209
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL+ F + +W+ +INLVS + W RH+ D L++ L P D+GSGGGFPG+
Sbjct: 19 KLDRFAEILTRWNSRINLVSPRDLAHLWDRHIADCLQLASLIPPGVRLADMGSGGGFPGL 78
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I ++ V LIES +KA+FLR + AR + A RI++A I V++A
Sbjct: 79 IIAMA----TDADVTLIESDQRKAAFLREAARAVGARVTIIARRIEDAD--IPPVQVVTA 132
Query: 148 RALADLDTLLEYSFPWLYQ 166
RALA L LLE+S +L
Sbjct: 133 RALAALPQLLEWSSHFLAP 151
>gi|162147022|ref|YP_001601483.1| methyltransferase gidB (glucose-inhibited divisio protein B)
[Gluconacetobacter diazotrophicus PAl 5]
gi|189039395|sp|A9HE10|RSMG_GLUDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161785599|emb|CAP55170.1| putative methyltransferase gidB (Glucose-inhibited divisio protein
B) [Gluconacetobacter diazotrophicus PAl 5]
Length = 210
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL+ F + +W+ +INLVS + W RH+ D L++ L P D+GSGGGFPG+
Sbjct: 20 KLDRFAEILTRWNSRINLVSPRDLAHLWDRHIADCLQLASLIPPGVRLADMGSGGGFPGL 79
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I ++ V LIES +KA+FLR + AR + A RI++A I V++A
Sbjct: 80 IIAMA----TDADVTLIESDQRKAAFLREAARAVGARVTIIARRIEDAD--IPPVQVVTA 133
Query: 148 RALADLDTLLEYSFPWLYQ 166
RALA L LLE+S +L
Sbjct: 134 RALAALPQLLEWSSHFLAP 152
>gi|149912891|ref|ZP_01901425.1| glucose-inhibited division protein B [Roseobacter sp. AzwK-3b]
gi|149813297|gb|EDM73123.1| glucose-inhibited division protein B [Roseobacter sp. AzwK-3b]
Length = 203
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 63/151 (41%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
NVSRET+E+L + L KW+ +INLV+ ST+ D W RH DS++++ L P+P
Sbjct: 6 DLNVSRETVERLTIYEALLRKWTPRINLVARSTLPDLWQRHFVDSIQIYDLAPHPVDHWV 65
Query: 77 DLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSG GFPG++ +I L + L+ES +K FL V+++T AR V RI+
Sbjct: 66 DLGSGAGFPGLLMAILSLETGSPKRTTLVESDVRKCVFLNTVIRETGARADVINDRIENI 125
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + +V+SARALADL TLL ++ +
Sbjct: 126 PPLE--ANVLSARALADLTTLLGFAERHMRP 154
>gi|238025742|ref|YP_002909973.1| 16S rRNA methyltransferase GidB [Burkholderia glumae BGR1]
gi|237874936|gb|ACR27269.1| Methyltransferase GidB [Burkholderia glumae BGR1]
Length = 213
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSI 74
+ + KL + L KW+ NL S I+H+ DSL + +
Sbjct: 10 GLTLDETQVAKLLDYVALLGKWNAVYNLTSIRDPRQMLIQHILDSLSIVPHLRSLDAATR 69
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSGGG PGI+ +I + L +++ K+ + + ++ A V R++
Sbjct: 70 ALDVGSGGGLPGIVLAIVFPGWQVTLNDIVHKKSAFQTQAKAELK--LANLSVVTGRVET 127
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ DVI +RA ADL + + +
Sbjct: 128 LRPGHEVPGQFDVIVSRAFADLADFVSLARHLVAP 162
>gi|307246579|ref|ZP_07528650.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255564|ref|ZP_07537369.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307260015|ref|ZP_07541727.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852451|gb|EFM84685.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306861413|gb|EFM93402.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865851|gb|EFM97727.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 205
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L N++ + E+L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MRQKLDRLLEQAQINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H + +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSEHLQGNNFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYKEQT--FDGVLSRAFASLNDMVDWCYHL 153
>gi|323703265|ref|ZP_08114916.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
gi|323531730|gb|EGB21618.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
Length = 240
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSG 81
+ + + L ++ ++KINL + ++ I+H D + + P + +D+GSG
Sbjct: 22 QQISLFNKYLSLIIEGNEKINLTAILEPKEVAIKHFVDSLTCLLAVSFPTGAKVLDIGSG 81
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM-- 138
GFPG+ I ++ + L++S NK+ FL+ + K R ++ Q
Sbjct: 82 AGFPGVPLKIYRPDLQ---ITLMDSLNKRILFLQDTINKLGLNNITAIHSRAEDFGQQPA 138
Query: 139 -ITTCDVISARALADLDTLLEYSFPWLY 165
DV+ +RA+A L L EY P +
Sbjct: 139 NRENFDVVVSRAVARLVVLSEYCLPCVK 166
>gi|289422527|ref|ZP_06424370.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
gi|289157099|gb|EFD05721.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
Length = 240
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
Query: 3 YCDSNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ N L + L N + L++ E + + + +++ +NL + + +I+H D
Sbjct: 1 MSEENIKLLRDGLKNYKIDCDDIMLDRFETYREILVDFNQHMNLTGITDQREVYIKHFLD 60
Query: 62 SLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
S+ +F+ ID+G+G GFPG+ I IE L++ + + + +
Sbjct: 61 SVAIFKHGYLTGDLSVIDVGTGAGFPGLPFKIANPDIELTLLDSLNKRINFLKEVGRGIG 120
Query: 120 KTAAR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A I + D+ +ARA+A+L LLE P++
Sbjct: 121 FDDIDYVHGRAEEIGQNKDYRQKFDIATARAVANLPVLLELCVPFVK 167
>gi|304318131|ref|YP_003853276.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779633|gb|ADL70192.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 240
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGG 83
+E+ +Y L L+W++K+NL + + D ++H DSL ID+G+G G
Sbjct: 25 VEQFIKYYDLLLEWNQKMNLTAITEERDVVVKHFLDSLTAKICKKINGNERIIDVGAGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQ---MI 139
FP I I S++ + +++S K+ FL +VQ+ ++ R ++ + +
Sbjct: 85 FPSIPLKILYPSLK---LTIVDSLKKRTVFLNELVQQLHLNDVEIIHGRAEDLGKDNSLR 141
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D+ +RA+A L+ LLEY P++
Sbjct: 142 EKFDISLSRAVAQLNILLEYCIPFVK 167
>gi|265763391|ref|ZP_06091959.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_16]
gi|263255999|gb|EEZ27345.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_16]
Length = 225
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 21 KLLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRF 80
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +DLG+GGGFPGI +I + LV+ I K + A+ + +
Sbjct: 81 RAGSSVMDLGTGGGFPGIPLAILFPDTKFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 138
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E Q D + +RA+ L L++ + K+
Sbjct: 139 ARAEEEKQT---FDFVVSRAVMPLADLIKIIRKNISPKQ 174
>gi|212637843|ref|YP_002314368.1| 16S rRNA methyltransferase GidB [Shewanella piezotolerans WP3]
gi|226725363|sp|B8CVV5|RSMG_SHEPW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|212559327|gb|ACJ31781.1| Glucose inhibited division protein [Shewanella piezotolerans WP3]
Length = 207
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ S + ++L F + KW+K NL S E IRH+ DS V H S +ID
Sbjct: 14 GLDASEQQKKQLVDFVGMLNKWNKAFNLTSVRDPEQMLIRHIMDS-LVVSPHLKGSRFID 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ F + V + EA Q
Sbjct: 73 VGTGPGLPGIPLAILNPDKE---FVLLDSLGKRIRFQKQVQFELGINNISSIESRVEAYQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + +L++
Sbjct: 130 PEELFDGVLSRAFASIQDMLQWCHHL 155
>gi|53713316|ref|YP_099308.1| 16S rRNA methyltransferase GidB [Bacteroides fragilis YCH46]
gi|253565295|ref|ZP_04842750.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_2_5]
gi|81608504|sp|Q64UQ5|RSMG_BACFR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52216181|dbj|BAD48774.1| glucose-inhibited division protein [Bacteroides fragilis YCH46]
gi|251945574|gb|EES85981.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_2_5]
Length = 224
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 20 KLLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARIIRF 79
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +DLG+GGGFPGI +I + LV+ I K + A+ + +
Sbjct: 80 RAGSSVMDLGTGGGFPGIPLAILFPDTKFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 137
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E Q D + +RA+ L L++ + K+
Sbjct: 138 ARAEEEKQT---FDFVVSRAVMPLADLIKIIRKNISPKQ 173
>gi|238018232|ref|ZP_04598658.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
gi|237864703|gb|EEP65993.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
Length = 250
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLG 79
+ E + +Y ++ +K +NL + +++ ++H+ DSL + H ID+G
Sbjct: 31 TEEQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDPHIIKSGMSIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--AP 136
+G GFPGI +I S++ V L +S K+ +FL ++ + R ++
Sbjct: 91 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLTFLESIMDELQLTNCTTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKE 177
>gi|165977090|ref|YP_001652683.1| 16S rRNA methyltransferase GidB [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190150985|ref|YP_001969510.1| methyltransferase GidB [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303249897|ref|ZP_07336099.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307250949|ref|ZP_07532875.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307253321|ref|ZP_07535193.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307257736|ref|ZP_07539493.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307262143|ref|ZP_07543794.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307264342|ref|ZP_07545930.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|193806478|sp|B0BRY0|RSMG_ACTPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226795817|sp|B3H2Q1|RSMG_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|165877191|gb|ABY70239.1| glucose inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189916116|gb|ACE62368.1| methyltransferase GidB [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302650960|gb|EFL81114.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306856977|gb|EFM89107.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859185|gb|EFM91226.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306863642|gb|EFM95568.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306868120|gb|EFM99945.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306870294|gb|EFN02050.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 205
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L N++ + E+L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MRQKLDRLLEQAQINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H + +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSEHLQGNNFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYKEQT--FDGVLSRAFASLNDMVDWCYHL 153
>gi|197106983|ref|YP_002132360.1| glucose inhibited division protein B [Phenylobacterium zucineum
HLK1]
gi|196480403|gb|ACG79931.1| glucose inhibited division protein B [Phenylobacterium zucineum
HLK1]
Length = 253
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
LE F + +NLV T+ DFW RH DS ++ +L P +W DLG+G GFPG++
Sbjct: 63 LERFLAKLEAGNAVMNLVGPKTLPDFWNRHAWDSAQLLKLAPDARVWADLGAGAGFPGLV 122
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I G V+L+ES K+ FL VV + V + A + D+++AR
Sbjct: 123 LAILGKGRPGFHVHLVESMAKRCRFLTEVVTELGLPATVHN---ERAENLDLAVDIVTAR 179
Query: 149 ALADLDTLLEYSFPWLY 165
A A L LL Y+ P+L
Sbjct: 180 ACAPLGRLLGYARPYLK 196
>gi|256545942|ref|ZP_05473297.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
gi|256398364|gb|EEU11986.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
Length = 209
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K + + + ++ +KK NL S ++ I+H EDSL + +D+GSG GFP
Sbjct: 1 MDKFKIYEQMLIETNKKFNLTSIDDPKEIRIKHFEDSLTIKSYINKGMKVLDIGSGAGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA-PQMITTCD 143
GI I+ + LI+S NKK +F+ V+++ + K R ++ D
Sbjct: 61 GIPLRIE----TDFDLTLIDSVNKKVNFMNEVIEELKLEKAKAIHIRAEDYAKDHREEFD 116
Query: 144 VISARALADLDTLLEYSFPWLY 165
++ +RA+A+L TL EY+ P+L
Sbjct: 117 MVISRAVANLSTLSEYALPFLK 138
>gi|332308609|ref|YP_004436460.1| methyltransferase GidB [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175938|gb|AEE25192.1| methyltransferase GidB [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 215
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ L VS E + KL F L KW+K NL S E I+H+ DS+ V
Sbjct: 12 LQEYISLTDLQVSEEQISKLVGFVQLIHKWNKAYNLTSVRDPESMLIKHIMDSIVVAPHL 71
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L L++S K+ F++ V + +
Sbjct: 72 QQSH-YIDVGTGPGLPGIPLAIMLPQT---HFTLLDSLGKRVRFMKQVAYELKLDNILPV 127
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
E + + +RA A L+ +L + +
Sbjct: 128 QSRVEDYASAHELNGVLSRAFASLNDMLTWCQHLI 162
>gi|221135170|ref|ZP_03561473.1| methyltransferase GidB [Glaciecola sp. HTCC2999]
Length = 220
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 4/147 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V+ E L+KL + + KW+K NL S ++D ++HV DS+ V + +ID
Sbjct: 25 DLTVTAEQLQKLVMYIEMMHKWNKAYNLTSIRQIDDMLVKHVLDSI-VVSPFLRGTRFID 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L++S K+ F++ V E +
Sbjct: 84 VGTGPGLPGIPLAIMHPE---YEFVLLDSLGKRVRFMQQVAYGLKLNNISPVQSRVEEYK 140
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D + +RA A + +L + +
Sbjct: 141 DPNGFDGVISRAFASIKDMLHWCGHLV 167
>gi|169334514|ref|ZP_02861707.1| hypothetical protein ANASTE_00917 [Anaerofustis stercorihominis DSM
17244]
gi|169259231|gb|EDS73197.1| hypothetical protein ANASTE_00917 [Anaerofustis stercorihominis DSM
17244]
Length = 236
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D L+A + + EKL F + L+ +KK NL + + ++F +H+ DS
Sbjct: 1 MDLREYLKAGLKKSGIEIEDNKAEKLLKFMEIVLRENKKFNLTAITDEKEFIEKHIIDSA 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+GSG G PGII I + + L++S NK+ ++L +++
Sbjct: 61 IAVKYIKNEGKLIDIGSGAGMPGIIIKILN---DDMDILLLDSLNKRVNYLNETIKELEL 117
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E + D ++ARA+A L+ L EY+ P++
Sbjct: 118 NNIEAIHARAEELSHDKDYRESFDYVTARAVAKLNVLTEYTTPFIK 163
>gi|189040863|sp|A3QJS0|RSMG_SHELP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 207
Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + ++L F + KW+K NL S E IRH+ DSL H
Sbjct: 6 LDSYLADMQMTATPKQKQQLLDFVAMLAKWNKAYNLTSVRDPEQMLIRHIMDSLAA-SPH 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I E L++S K+ F + V + A
Sbjct: 65 LVGERFIDVGTGPGLPGIPLAIMNPDKE---FVLLDSLGKRIRFQKQVQFELAIGNISSV 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA Q D + +RA A + +L++
Sbjct: 122 ESRVEAYQPEEKFDGVLSRAFASIQDMLQWCHHLPKP 158
>gi|84501193|ref|ZP_00999398.1| glucose-inhibited division protein B [Oceanicola batsensis
HTCC2597]
gi|84390484|gb|EAQ02972.1| glucose-inhibited division protein B [Oceanicola batsensis
HTCC2597]
Length = 201
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 92/146 (63%), Gaps = 4/146 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
+VSRETLE+LE F L +W+ +INLVS ST++D W RHV DS++VF+ S W+D+
Sbjct: 6 DVSRETLERLEIFVRLLRQWNPRINLVSKSTLDDAWNRHVADSVQVFEASRQASGLWVDM 65
Query: 79 GSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ +I L V LIES +K +FLR V ++ + A RI++ P
Sbjct: 66 GSGGGFPGLVIAILALERAPALQVKLIESDQRKCAFLRTVAREAGVSVSIKARRIEDEPP 125
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
+ VISARALA L LL++S
Sbjct: 126 --SQASVISARALAPLTDLLQFSQRH 149
>gi|167044776|gb|ABZ09445.1| putative glucose inhibited division protein [uncultured marine
microorganism HF4000_APKG8C21]
Length = 304
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+A ++S +E+ +Y W+ ++NL S + ED H DSL V
Sbjct: 69 ELLKAGTAALGIHLSLAQIERFRAYYQEIANWNTRVNLTSVTRWEDVQTTHFVDSLTVSL 128
Query: 68 LHPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P + +D+GSG GFPGI I V LIES KK +FL ++
Sbjct: 129 AIPRAVLESGWIVDVGSGAGFPGIPLKIAFPGAR---VTLIESTGKKTAFLSHLTHALGL 185
Query: 124 RGKVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFPW-------LYQKK 168
EA P++ + D + +RA+A + L+E + P+ + QKK
Sbjct: 186 EDVDVRTGRAEALAHDPELRESFDCVVSRAVAGMAALVELTLPFCRVGGIVVAQKK 241
>gi|268610512|ref|ZP_06144239.1| 16S rRNA methyltransferase GidB [Ruminococcus flavefaciens FD-1]
Length = 234
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIW 75
+++ E K + + +++++ +NL + + + +H DS+ + + S
Sbjct: 16 ELDLTEEMYRKYDIYAECLVEYNRNVNLTAITDPVEILYKHFIDSVLMLKYAEIKPDSSV 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
ID+G+G GFP + I S++ + L++S NK+ SFL+ + +K R ++
Sbjct: 76 IDVGTGAGFPSVPAKIYDDSLK---ITLLDSLNKRISFLQQLCEKLQIDAAFIHGRAEDI 132
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
P+ D+ ARA+A++ L EY P++
Sbjct: 133 AKLPEYREKFDISCARAVANMSLLSEYCLPFV 164
>gi|110835597|ref|YP_694456.1| methyltransferase GidB; glucose-inhibited division protein B
[Alcanivorax borkumensis SK2]
gi|123345183|sp|Q0VKW4|RSMG_ALCBS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110648708|emb|CAL18184.1| Methyltransferase GidB; glucose-inhibited division protein B
[Alcanivorax borkumensis SK2]
Length = 204
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 8/158 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++S + L + L +KW++ NL + ++ RH+ DSL V +
Sbjct: 7 LTQGIDALGLSLSDDQQRLLLAYVDLLVKWNQAYNLTAIRDPQEMVTRHLLDSLAV-LAY 65
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+G+G G PG+I ++ L++S KK F+R ++ +V
Sbjct: 66 LEEGDTLDVGTGAGIPGVILAVARP---QQAFVLLDSNGKKTRFVRQARRELGLDNVEVV 122
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R+++ + + I RA A L +L P +
Sbjct: 123 HGRVEQYRKAPSQ---IICRAFASLSDMLALMTPIMTD 157
>gi|238921735|ref|YP_002935250.1| 16S rRNA methyltransferase GidB [Edwardsiella ictaluri 93-146]
gi|259495494|sp|C5BF32|RSMG_EDWI9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238871304|gb|ACR71015.1| 16S rRNA methyltransferase GidB, putative [Edwardsiella ictaluri
93-146]
Length = 206
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ + ++L + L KW+K NL S D +RH+ DS+ V + +ID
Sbjct: 13 GISLTDQQKQRLLGYVSLLDKWNKAYNLTSVREPRDMLVRHIMDSI-VVSPYLQGLRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVRPDAN---FTLLDSLGKRVRFLRQVQHELRLDNIEPVQSRVEAFV 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L ++ +
Sbjct: 129 AEPPFDGVISRAFASLQDMVSWCHHL 154
>gi|254483171|ref|ZP_05096404.1| methyltransferase GidB [marine gamma proteobacterium HTCC2148]
gi|214036542|gb|EEB77216.1| methyltransferase GidB [marine gamma proteobacterium HTCC2148]
Length = 169
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
T ++L + L +KW++ NL + E +H+ DSL + + ID+G+GGG
Sbjct: 9 TQQRLLAYLELMIKWNRAYNLTAVRDPEQMVTKHLLDSLAIAPYLAGDYL-IDVGTGGGL 67
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG+ SI + L++S KK FL V V EA T D
Sbjct: 68 PGVPLSIVFPDRQFH---LLDSNGKKTRFLFQVKTALGLDNMVVHQARVEAFDSETPFDA 124
Query: 145 ISARALADLDTLLEYSFPW 163
+ +RA A L+ +++
Sbjct: 125 VLSRAFASLEDMVDDCRHL 143
>gi|167838436|ref|ZP_02465295.1| methyltransferase GidB [Burkholderia thailandensis MSMB43]
Length = 213
Score = 99.8 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 8/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + +D
Sbjct: 13 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGACGAAVSALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI+ +I L + L ++++ K+ + + ++ V R++
Sbjct: 73 VGSGGGLPGIVLAIALPGWQVALNDIVQKKSAFQNQAKAELK--LGNLSVVTGRVETLRP 130
Query: 138 MIT---TCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 131 GVEVPGKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|159896713|ref|YP_001542960.1| 16S rRNA methyltransferase GidB [Herpetosiphon aurantiacus ATCC
23779]
gi|159889752|gb|ABX02832.1| methyltransferase GidB [Herpetosiphon aurantiacus ATCC 23779]
Length = 236
Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ +S +++LE++ L +WS+++NLV+ ST+ + RH+ DS +
Sbjct: 5 ELLQTTLAEWQLTLSTSQIDRLEHYVALLTQWSERMNLVAPSTLPEATRRHLLDSFSLAT 64
Query: 68 LHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ D+GSG G PGI +I E L+ I K + + +Q +
Sbjct: 65 TCEQAPASLADIGSGAGLPGIPLAILWPETEVLLIESISKKAEFLRHVAQELQLERVLVE 124
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
V A + + +++ARA+A+L TL EY P
Sbjct: 125 VERAEVVGRERRWREHFALVTARAVANLATLAEYCLPL 162
>gi|126738503|ref|ZP_01754208.1| glucose-inhibited division protein B [Roseobacter sp. SK209-2-6]
gi|126720302|gb|EBA17008.1| glucose-inhibited division protein B [Roseobacter sp. SK209-2-6]
Length = 211
Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 9/165 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---- 65
+ + + + +VSRET+++L +F KW+ KINLVS S+++DFW RH+ DS +V
Sbjct: 1 MTRDLICGSLDVSRETIDRLSHFEQTLFKWNPKINLVSKSSLQDFWTRHIVDSAQVFLLA 60
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTA 122
+ + W+D+GSGGGFPG++ +I + V LIES +KA+FLR ++
Sbjct: 61 EDYISKEEDTNWLDIGSGGGFPGLVIAILAAERAARLSVTLIESDKRKAAFLRTAARECD 120
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R KV + RI++ +SARALADLD L E+S L+ +
Sbjct: 121 VRVKVISDRIEKVDPQNANF--LSARALADLDLLFEFSERHLHPR 163
>gi|294143116|ref|YP_003559094.1| glucose-inhibited division protein B [Shewanella violacea DSS12]
gi|293329585|dbj|BAJ04316.1| glucose-inhibited division protein B [Shewanella violacea DSS12]
Length = 206
Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 4/155 (2%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L + + ++L F + KW+K NL S + IRH+ DSL V
Sbjct: 5 LLDEYLAEMNLTATEQQKKQLVGFVEMLNKWNKAYNLTSVRDPKQMLIRHIMDSLAV-SA 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
H +ID+G+G G PGI +I L++S K+ F + V
Sbjct: 64 HLVGERFIDVGTGPGLPGIPLAIMNPDK---HFVLLDSLGKRIRFQKQVQFDLGIDNISS 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA + D + +RA A ++ +L +
Sbjct: 121 VESRVEAYEPEEKFDGVLSRAFASIEDMLHWCHHL 155
>gi|319953777|ref|YP_004165044.1| 16S rRNA m(7)g-527 methyltransferase [Cellulophaga algicola DSM
14237]
gi|319422437|gb|ADV49546.1| 16S rRNA m(7)G-527 methyltransferase [Cellulophaga algicola DSM
14237]
Length = 211
Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPY 71
L+ +++ E + L+ W+ KIN+VS +++ ++RHV SL +
Sbjct: 6 LFLHFPDLTEEQKRQFTLLADLYKDWNMKINVVSRKDIDELYLRHVLHSLAIAKVHQFLP 65
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
S ID+G+GGGFPG+ +I L+++ KK + VV
Sbjct: 66 GSSVIDVGTGGGFPGVPLAILFPET---HFTLVDAIGKKIKVVDGVVAGLGLKNVTTIND 122
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ D I +RA+A + T + ++ + ++
Sbjct: 123 RVETVK---GKFDFIVSRAVAAMPTFVHWTKGIIKKE 156
>gi|227485739|ref|ZP_03916055.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
gi|227236294|gb|EEI86309.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
Length = 209
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K + L+ + NL + + + ++H +DSL V +DLG+G GFP
Sbjct: 1 MDKYIVYTDYLLEVNSHTNLTTITDPAEIDLKHFKDSLTVLDYIKEGDKVLDLGAGAGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMITTCD 143
GI I+ + + LI+S NKK +F+ V++K + R ++ A D
Sbjct: 61 GIPLRIE----KDFDLTLIDSVNKKVNFMNEVIEKLGLTNARAIHTRAEDFAKDHREGFD 116
Query: 144 VISARALADLDTLLEYSFPWLY 165
V+ +RA+A++ TL E P +
Sbjct: 117 VVVSRAVANMATLSELCLPLVK 138
>gi|240950031|ref|ZP_04754339.1| glucose-inhibited division protein B [Actinobacillus minor NM305]
gi|240295509|gb|EER46252.1| glucose-inhibited division protein B [Actinobacillus minor NM305]
Length = 205
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L +++ + ++L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MLEKLDRLLSQANISLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSQHLQGQQFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNAIRELKLTN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYQEQ--QFDGVLSRAFASLNDMVDWCYHL 153
>gi|309390343|gb|ADO78223.1| 16S rRNA m(7)G-527 methyltransferase [Halanaerobium praevalens DSM
2228]
Length = 243
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 1 MKYCDSNSI--LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
MK + I L+ + S+E LE+L +Y F+ +KK NL + + E +H
Sbjct: 1 MKTNKNEFIAKLKKGIEELDISYSQEQLEQLWEYYLFFISENKKYNLSTITEPEAVITKH 60
Query: 59 VED--SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
D + W+D+G+G GFPG++ + L L++S +KK +FL
Sbjct: 61 FLDSLVILKELDFAQHKRWLDIGTGAGFPGMVLKLFLPG---DSFYLLDSASKKVNFLNQ 117
Query: 117 VVQKTAARG----KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
++ K G A + + + + D + +RA+A L+ LLEY P+L
Sbjct: 118 LIYKLDLTGIEATHARAEDLAQLEDLRASFDYVCSRAVAALNVLLEYVVPFLK 170
>gi|330815035|ref|YP_004358740.1| Methyltransferase GidB [Burkholderia gladioli BSR3]
gi|327367428|gb|AEA58784.1| Methyltransferase GidB [Burkholderia gladioli BSR3]
Length = 229
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 7/154 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+ + ++KL + L KW+ NL + I+H+ DSL + +
Sbjct: 27 GIELEQTQVDKLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLRELDVKTA 86
Query: 77 -DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+GSGGG PGI+ +I + L +++ K+ + + ++ A V R++
Sbjct: 87 LDVGSGGGLPGIVLAIVFPHWQVTLNDIVHKKSAFQTQAKAELK--LANLSVVTGRVESL 144
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ DVI +RA ADL + + +
Sbjct: 145 RPGHEVPGQFDVIVSRAFADLSDFVVLARHLVAP 178
>gi|294794211|ref|ZP_06759347.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
gi|294454541|gb|EFG22914.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
Length = 239
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLG 79
+ E + +Y ++ +K +NL + +++ I+H+ DSL + + + ID+G
Sbjct: 20 TEEQAKDFYLYYVHMIETNKYLNLTGITDMKEVVIKHMIDSLSCYNSEIIKFGMSIIDVG 79
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--AP 136
+G GFPGI +I S++ V L +S K+ +FL V+ + R ++
Sbjct: 80 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLNFLESVIDELKLTNCTTLHGRAEDLSHQ 136
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 137 DYRESFDIATSRAVARLPILLEWTVPYVKE 166
>gi|295691566|ref|YP_003595259.1| methyltransferase Gidb [Caulobacter segnis ATCC 21756]
gi|295433469|gb|ADG12641.1| methyltransferase GidB [Caulobacter segnis ATCC 21756]
Length = 221
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S + L F L +W++ +NLV T+ +W RH DS ++ L P + W DLG+G
Sbjct: 30 SDVQIADLARFQELLAEWNEVMNLVGPLTIATYWTRHALDSSQLLDLAPEANTWADLGAG 89
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PG++ +I L G V+L+ES K+ FL V + ++ R ++
Sbjct: 90 AGLPGVVLAILLKGRAGAKVHLVESMAKRCRFLEVVAKDLDLPVQIHNARAEDLK---LK 146
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
++++ARA A + LL ++ P+L
Sbjct: 147 VEIVTARACAPMTKLLGFAEPYLR 170
>gi|323135830|ref|ZP_08070913.1| methyltransferase GidB [Methylocystis sp. ATCC 49242]
gi|322398921|gb|EFY01440.1| methyltransferase GidB [Methylocystis sp. ATCC 49242]
Length = 217
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 85/140 (60%), Gaps = 1/140 (0%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+LE + L +W KINLV+ +T+ + W+RH DS + + P +W+D+GSG GFPG+
Sbjct: 23 ELEIYEELLRRWQGKINLVAPNTLNEIWMRHFADSAQAVEAAPEARVWLDIGSGAGFPGL 82
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ-EAPQMITTCDVIS 146
+T++ L V+LIES +KA+F+R V ++T A ++ RI+ E P++ D +S
Sbjct: 83 VTALLLKDRREAKVHLIESDQRKAAFMRAVSRETGAPAEIHVGRIEAELPRLSGRIDAVS 142
Query: 147 ARALADLDTLLEYSFPWLYQ 166
ARALA LD LL + L
Sbjct: 143 ARALAPLDRLLALAAGPLKN 162
>gi|167582845|ref|ZP_02375719.1| methyltransferase GidB [Burkholderia thailandensis TXDOH]
Length = 230
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 7/151 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDL 78
+S L + L KW+ NL + I+H+ DSL + +D+
Sbjct: 31 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGARGAAAALDV 90
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP-- 136
GSGGG PGI+ +I L + L ++++ K+ + + ++ V R++
Sbjct: 91 GSGGGLPGIVLAIALPGWQVTLNDIVQKKSAFQNQAKAELK--LGNLSVVTGRVETLRPG 148
Query: 137 -QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 149 ADVQGKFDVIVSRAFADLADFVTLARHLVAP 179
>gi|254292378|ref|YP_003058401.1| methyltransferase GidB [Hirschia baltica ATCC 49814]
gi|254040909|gb|ACT57704.1| methyltransferase GidB [Hirschia baltica ATCC 49814]
Length = 216
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/159 (35%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
R+ L + +VSRET +K+ + KW K NL+ W RH+ DSL+V+Q
Sbjct: 11 FRSKDLSDYLDVSRETFDKINIVVEVLDKWRKTHNLIGPLERNRLWRRHILDSLQVYQYR 70
Query: 70 PYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
S WIDLGSG GFP +I S L+ES KK +FLR + V
Sbjct: 71 SDNASKWIDLGSGAGFPALIM-ACASGNAEEKYTLVESNGKKCAFLRAAARAANLNISVE 129
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
RI+ T D +++RALA L L +YS +L K
Sbjct: 130 NSRIESVS--RETYDHVTSRALASLPQLYDYSERFLANK 166
>gi|163751412|ref|ZP_02158637.1| glucose-inhibited division protein B [Shewanella benthica KT99]
gi|161328715|gb|EDP99863.1| glucose-inhibited division protein B [Shewanella benthica KT99]
Length = 206
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 4/155 (2%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L + + ++L F + KW+K NL S + IRH+ DSL V
Sbjct: 5 LLGEYLAEMNLTATEQQQQQLVGFVEMLNKWNKAYNLTSVRDPQQMLIRHIMDSLAVSAH 64
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ID+G+G G PGI +I L++S K+ FL+ V
Sbjct: 65 -LVGERFIDVGTGPGLPGIPLAIMNPDK---HFVLLDSLGKRIRFLKQVQFNLGIDNISS 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA + D + +RA A ++ +L +
Sbjct: 121 VESRVEAYEPEEKFDGVLSRAFASIEDMLHWCHHL 155
>gi|326314884|ref|YP_004232556.1| ribosomal RNA small subunit methyltransferase G [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323371720|gb|ADX43989.1| Ribosomal RNA small subunit methyltransferase G [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 243
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 21/159 (13%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
++S L +L F L KW++ NL + ++ H+ DSL +
Sbjct: 20 GLDLSETQLAQLLEFLALLQKWNQVYNLTAVRDPQEMLTHHLLDSLAAVAPLQRHLKAVQ 79
Query: 77 ---------------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
D+GSGGG PG++ +I S++ V+ +++ KKA+F++
Sbjct: 80 GLPGSAGEGARLRLLDVGSGGGLPGVVFAICCPSLD---VSCVDTVAKKAAFIQQAAVSL 136
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R + DV+S RA A L + +S
Sbjct: 137 RLRN--LRGIHARVETLAGPFDVVSCRAFASLPDFVAWS 173
>gi|148381578|ref|YP_001256119.1| methyltransferase GidB [Clostridium botulinum A str. ATCC 3502]
gi|153934180|ref|YP_001385955.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|153936099|ref|YP_001389362.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
gi|166224583|sp|A7FPL8|RSMG_CLOB1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224584|sp|A5I814|RSMG_CLOBH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148291062|emb|CAL85199.1| methyltransferase [Clostridium botulinum A str. ATCC 3502]
gi|152930224|gb|ABS35724.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|152932013|gb|ABS37512.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
Length = 239
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + + +L + L +W+KKINL + ++ +H D +++F+ P
Sbjct: 15 NLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSL 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+ G G G E + L++S K+ +FL V+ + + R ++
Sbjct: 75 IDIGTG-AGFPGIPIKILKEDIEITLLDSLQKRINFLNTVIGELQLKNIQCLHGRAEDYA 133
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D+ +RA+A+L L E+ P++ +
Sbjct: 134 QEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|289579528|ref|YP_003478155.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
gi|289529241|gb|ADD03593.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
Length = 240
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 2 KYCDS--NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
K D + + + ++V E +Y L L+W+KK+NL + + + I+H
Sbjct: 4 KSVDMLIDGAKKLGIFMEMFHV-----EHFHKYYSLLLEWNKKMNLTAITEESEVVIKHF 58
Query: 60 EDSLRVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL V + ID+G+G GFP I I ++ L++S K+ +FL V
Sbjct: 59 LDSLSVVKSGKIQGEEKIIDVGTGAGFPSIPLKIVFPKLKA---TLLDSSKKRITFLEEV 115
Query: 118 VQKTAAR-GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ K ++ R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 116 INKLDINEIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVK 167
>gi|15603351|ref|NP_246425.1| glucose-inhibited division protein B [Pasteurella multocida subsp.
multocida str. Pm70]
gi|13431543|sp|P57946|RSMG_PASMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|12721870|gb|AAK03570.1| GidB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 210
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ LL +++ + E+L L KW+K NL S + ++H+ DS+ V
Sbjct: 11 KLEILLKQTALSITDQQKEQLIKLVLLLNKWNKAYNLTSVRDPMEMLVKHILDSV-VVSP 69
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
H +ID+G+G G PG+ +I + L++S K+ SF+R +++
Sbjct: 70 HLQGKHFIDVGTGPGLPGLPLAIVNPNK---HFVLLDSLGKRISFIRNAIRELGLDNVEA 126
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E D + +RA A L + ++ Q
Sbjct: 127 VLSRVEEYHPEQPFDGVLSRAFASLKDMTDWCQHLPKQ 164
>gi|167648980|ref|YP_001686643.1| methyltransferase GidB [Caulobacter sp. K31]
gi|189039491|sp|B0T6E2|RSMG_CAUSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167351410|gb|ABZ74145.1| methyltransferase GidB [Caulobacter sp. K31]
Length = 221
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ L L F L +W++ +NLV +T+ +W RH DS ++ +L P W DLG+G
Sbjct: 28 TDAQLADLTRFQALLTEWNEVMNLVGPATLPTYWNRHAWDSAQLLKLAPDARTWADLGAG 87
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PG++ +I L G ++L+ES K+ FLR V ++ R +E +
Sbjct: 88 AGLPGVVLAILLKGTPGAKIHLVESMTKRCKFLRAVADALDLPVEIHNARAEE---LDLK 144
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
++++ARA A + LL Y+ P+L +
Sbjct: 145 VEIVTARACAPMVRLLGYAQPYLKR 169
>gi|78224741|ref|YP_386488.1| glucose inhibited division protein [Geobacter metallireducens
GS-15]
gi|123570638|sp|Q39PR1|RSMG_GEOMG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78195996|gb|ABB33763.1| 16S rRNA m(7)G-527 methyltransferase [Geobacter metallireducens
GS-15]
Length = 220
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 1/159 (0%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ + K F KW++KINL + +T + ++H DSL + +
Sbjct: 7 DLLVRGAAQLGVELTSAQVGKFALFAAELRKWNRKINLTAITTEREIALKHFVDSLSLCR 66
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+DLGSGGGFP I +I E V+ +E K + ++ + + +
Sbjct: 67 AVGKGGKLLDLGSGGGFPVIPFAILHPKSEVVSVDAVEKKIIFQRHMGRLLGLSCFQ-SI 125
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + A + D I +RA +D+ T + + P L
Sbjct: 126 HARGEELAGRFAGHFDWIVSRAFSDIPTFVRMALPLLRP 164
>gi|300087974|ref|YP_003758496.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527707|gb|ADJ26175.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 239
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S+ L +S K + ++ ++W+ NL S + E +H DS+ +
Sbjct: 6 SLFENGCLSLGVRLSESQSTKFQRYFEQLIEWNGYFNLTSITENEQVQTKHFLDSMSLII 65
Query: 68 L--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+GSG GFPGI I S++ + L+E+ +KK FL +V
Sbjct: 66 SGLEFEDKSLLDVGSGAGFPGIPLKILFPSLK---LTLLEASSKKCHFLEHVTNILELNE 122
Query: 126 KVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFPW 163
E P+ D+++ARALA LD L+E P+
Sbjct: 123 VKVCNERAEVQAHQPEFRENFDLVAARALASLDVLVELCLPF 164
>gi|294341940|emb|CAZ90369.1| putative Methyltransferase gidB (Glucose-inhibited division protein
B) [Thiomonas sp. 3As]
Length = 224
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIW 75
+ + ++L + L +W++ NL + +E H+ D L P
Sbjct: 26 QLDFTARQRQQLLDYTALLQRWNRVFNLTAVRDLEGIARLHLADCLAALPALQRLAPRRL 85
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSGGG PGI+ +I L E V+LI++ KK +FL+ R EA
Sbjct: 86 LDVGSGGGLPGIVFAIGLPEAE---VHLIDTVQKKCAFLQQTCGSLQLRQVNVHHARVEA 142
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D I++RA +DL L++ + L
Sbjct: 143 LADARGFDCITSRAFSDLPLLIQSTRHLLAD 173
>gi|297545650|ref|YP_003677952.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843425|gb|ADH61941.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 240
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLGSGGG 83
+E +Y L L+W+KK+NL + + + I+H DSL V + ID+G+G G
Sbjct: 25 VEHFHKYYSLLLEWNKKMNLTAITEESEVVIKHFLDSLSVVKSGKIKGEEKIIDVGTGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAP---QMI 139
FP I I ++ L++S K+ +FL V+ K ++ R ++ +
Sbjct: 85 FPSIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLDINEIELIHGRAEDIGKDIKYR 141
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D+ ARA+A L+ LLEY+ P++
Sbjct: 142 EQFDLSVARAVAPLNILLEYTLPFVK 167
>gi|10177222|dbj|BAB10297.1| unnamed protein product [Arabidopsis thaliana]
Length = 329
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS------- 73
+S +++ + L+W++K+NL ++ ++ RH+EDSL +
Sbjct: 63 LSSSQQDQIHLYVDTLLQWNQKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLHSSDL 122
Query: 74 ----IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
ID+GSG G PG++ +I V L+ES NK+ FL +VV T +
Sbjct: 123 FDHINLIDVGSGAGLPGLVLAIACPDWR---VTLLESINKRCVFLEHVVNVTGLTNVTIV 179
Query: 129 ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R + DV ARA+A++ L EY P +
Sbjct: 180 RGRAESCGHDVMYREKFDVAIARAVAEMRVLAEYCLPLVR 219
>gi|297733841|emb|CBI15088.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 99.0 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-----------FQLHPYPS 73
+++ + L+W++K+NL + + ++ RHV DSL +
Sbjct: 60 QKQQISLYVDALLQWNQKMNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSSCNNI 119
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+GSG G PG+I +I S + + L+ES NK+ FL + V T +V R
Sbjct: 120 SLVDVGSGPGLPGLILAIACPSWK---ITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRA 176
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q DV ARA+A++ L EY P +
Sbjct: 177 ENLGQNIGFREVFDVAVARAVAEMRILAEYCLPLVR 212
>gi|303228589|ref|ZP_07315416.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
gi|302516768|gb|EFL58683.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
Length = 249
Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLG 79
+++ + +Y ++ +K +NL + +++ ++H+ DSL + S ID+G
Sbjct: 31 TQQQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDPTIIKSGSSIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--AP 136
+G GFPGI +I ++ V L +S K+ +FL V+ + K R ++
Sbjct: 91 TGAGFPGIPLAIYDRTL---HVTLFDSLKKRLTFLESVIDELQLTNCKTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ Q
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKQ 177
>gi|84394518|ref|ZP_00993228.1| glucose-inhibited division protein B [Vibrio splendidus 12B01]
gi|84374871|gb|EAP91808.1| glucose-inhibited division protein B [Vibrio splendidus 12B01]
Length = 148
Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
VS + +L + L KW+K NL S ++ ++H+ DS+ + H +ID
Sbjct: 16 ELEVSEKQRGQLVGYVELLNKWNKAYNLTSVRDPQEMMVKHILDSI-IVSTHLQGKRFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI SI E L++S K+ F++ V+ + V E Q
Sbjct: 75 VGTGPGLPGIPLSIMNPDCEFY---LLDSLGKRIRFIKQVIHELGIDNVVPVQSRVEEFQ 131
Query: 138 MITTCDVISARALADL 153
D + +RA A +
Sbjct: 132 PEEKFDAVLSRAFASM 147
>gi|282848773|ref|ZP_06258168.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
gi|282581559|gb|EFB86947.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
Length = 250
Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLG 79
+ E + +Y ++ +K +NL + +++ ++H+ DSL + ID+G
Sbjct: 31 TEEQAKDFYMYYAHMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDSEIIKSGMTIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--AP 136
+G GFPGI +I S++ V L +S K+ +FL ++ K R ++
Sbjct: 91 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLTFLESIIDKLKLTNCTTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKE 177
>gi|77361914|ref|YP_341489.1| glucose-inhibited division protein B [Pseudoalteromonas
haloplanktis TAC125]
gi|123589146|sp|Q3IK40|RSMG_PSEHT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76876825|emb|CAI88047.1| putative S-adenosyl-L-methionine-dependent methyltransferase
domain, could be a tRNA or lipid methylase
[Pseudoalteromonas haloplanktis TAC125]
Length = 206
Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ + ++L + L KW+K NL S E+ ++H+ DS V H +ID
Sbjct: 14 NIALTEKQQQQLVRYVELLTKWNKAYNLTSVRLPEEMMVKHIMDS-LVVAPHLPGHHYID 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI+ +I L + L++S K+ FL +V + E Q
Sbjct: 73 VGTGPGLPGIVLAIALPNT---HFVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEEYQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D + +RA A L ++++ +
Sbjct: 130 PSVKLDGVLSRAFASLQDMVDWCGHLI 156
>gi|270294064|ref|ZP_06200266.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D20]
gi|270275531|gb|EFA21391.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D20]
Length = 206
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + +++ E + Y L+L W+ KIN++S +E+ + HV +
Sbjct: 2 DLILKYFPDLTEEQKRQFAALYDLYLDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ L++S KK + + F
Sbjct: 62 RPGTQIMDLGTGGGFPGIPLAILFPEVQFH---LVDSIGKKVRVASEIANSIGLKNVTFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
E + D + +RA+ L LL+
Sbjct: 119 HARAEEEK--GKFDFVVSRAVMPLTDLLKI 146
>gi|119503565|ref|ZP_01625648.1| glucose inhibited division protein B [marine gamma proteobacterium
HTCC2080]
gi|119460627|gb|EAW41719.1| glucose inhibited division protein B [marine gamma proteobacterium
HTCC2080]
Length = 210
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 4/150 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S +KL + L +W++ NL + RH+ DSL + P +D
Sbjct: 17 DLPLSAAQQKKLIAYVELINRWNRAYNLTAVRDPMAMVTRHLLDSLAISPHIPAGIT-LD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI ++ L++ KK FL V E Q
Sbjct: 76 VGTGPGLPGIPLAVAFPDQRFH---LLDGNGKKTRFLFQVKNDLLLTNVDIKETRVENFQ 132
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D I +RA A L +++ L +
Sbjct: 133 VDRGYDCIVSRAFASLSSMINSCQHLLSPQ 162
>gi|254427374|ref|ZP_05041081.1| methyltransferase GidB [Alcanivorax sp. DG881]
gi|196193543|gb|EDX88502.1| methyltransferase GidB [Alcanivorax sp. DG881]
Length = 204
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + L + L +KW++ NL + ++ RH+ DSL V H +D
Sbjct: 15 GLTLSDDQSRLLLAYVDLLVKWNQAYNLTAIRDPQEMVTRHLLDSLAV-LPHLGEGDTLD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+G G PGII ++ L++S KK F+R ++ +V R+++
Sbjct: 74 VGTGAGIPGIILAVARP---QQAFVLLDSNGKKTRFVRQARRELGLDNVEVVHGRVEQYR 130
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + I RA A L +L P +
Sbjct: 131 KAPSQ---IICRAFASLSDMLALMTPIMTD 157
>gi|169796154|ref|YP_001713947.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AYE]
gi|184157917|ref|YP_001846256.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ACICU]
gi|213157111|ref|YP_002319156.1| methyltransferase GidB [Acinetobacter baumannii AB0057]
gi|215483608|ref|YP_002325829.1| methyltransferase GidB [Acinetobacter baumannii AB307-0294]
gi|239502206|ref|ZP_04661516.1| glucose-inhibited division protein B [Acinetobacter baumannii
AB900]
gi|260555204|ref|ZP_05827425.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ATCC
19606]
gi|301345171|ref|ZP_07225912.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AB056]
gi|301511291|ref|ZP_07236528.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AB058]
gi|301595774|ref|ZP_07240782.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AB059]
gi|332872754|ref|ZP_08440720.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6014059]
gi|193806477|sp|B0VCZ6|RSMG_ACIBY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806487|sp|A3M4Y3|RSMG_ACIBT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725347|sp|B7H3N1|RSMG_ACIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725348|sp|B7I508|RSMG_ACIB5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691004|sp|B2HZC3|RSMG_ACIBC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169149081|emb|CAM86958.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter baumannii AYE]
gi|183209511|gb|ACC56909.1| predicted S-adenosylmethionine-dependent methyltransferase
[Acinetobacter baumannii ACICU]
gi|193077185|gb|ABO11977.2| glucose-inhibited division protein B [Acinetobacter baumannii ATCC
17978]
gi|213056271|gb|ACJ41173.1| methyltransferase GidB [Acinetobacter baumannii AB0057]
gi|213988342|gb|ACJ58641.1| methyltransferase GidB [Acinetobacter baumannii AB307-0294]
gi|260411746|gb|EEX05043.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ATCC
19606]
gi|322508236|gb|ADX03690.1| Glucose-inhibited division protein B [Acinetobacter baumannii
1656-2]
gi|323517862|gb|ADX92243.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii
TCDC-AB0715]
gi|332739051|gb|EGJ69912.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6014059]
Length = 210
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D
Sbjct: 16 GLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPAGRL-LD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGG PG+I ++ L++S KK FL+ + + + E
Sbjct: 75 VGTGGGMPGMIIALCQPE---RSCVLLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENQD 131
Query: 138 MI---TTCDVISARALADLDTLLEYSFPWLYQK 167
I DVI++RA A L +E + P+L+++
Sbjct: 132 TIDELGQFDVITSRAFASLTDFVEAARPYLHEQ 164
>gi|86134318|ref|ZP_01052900.1| glucose inhibited division protein [Polaribacter sp. MED152]
gi|85821181|gb|EAQ42328.1| glucose inhibited division protein [Polaribacter sp. MED152]
Length = 209
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ LL + +++ E+ L+ W+ KIN+VS +++ ++RHV +
Sbjct: 2 DILLKYFTDLTETQKEQFSKLQDLYKDWNLKINVVSRKDIDELYLRHVLHSLGIAKVMPF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ +D+G+GGGFPGI +I + L++S KK + V +
Sbjct: 62 KPGAKVMDVGTGGGFPGIPLAILFPETQFH---LVDSIGKKIKVVNEVAEGLGLENVTTT 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R++E D I +RA+A ++T + ++ + +K+
Sbjct: 119 HGRVEEVEDT---YDFIVSRAVAQMETFVRWTKGKIAKKQ 155
>gi|317478821|ref|ZP_07937972.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 4_1_36]
gi|316904997|gb|EFV26800.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 4_1_36]
Length = 206
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + +++ E + Y L+L W+ KIN++S +E+ + HV +
Sbjct: 2 DLILKYFPDLTEEQKRQFAALYDLYLDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I +L++S KK + + F
Sbjct: 62 RPGTQIMDLGTGGGFPGIPLAILFPE---VYFHLVDSIGKKVRVASEIANSIGLKNVTFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
E + D + +RA+ L LL+
Sbjct: 119 HARAEEEK--GKFDFVVSRAVMPLTDLLKI 146
>gi|331268196|ref|YP_004394688.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
gi|329124746|gb|AEB74691.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
Length = 243
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
+ + + + L W+ K+NL + + E+ +H DS+++FQ +
Sbjct: 19 GLEFNDKKYNQFIKYKDLLKDWNSKVNLTAITEDEEIIKKHFIDSMKIFQFEYLKKANKI 78
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
ID+G+GGGFPGI I ++ L++ ++ + + + + + R +E
Sbjct: 79 IDIGTGGGFPGIPMKIIRPEVQMVLLDSLKKRINVLDDI--LCKIDIDDVETIHGRAEEF 136
Query: 136 P---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ D + +RA+A+L +L E+ P++
Sbjct: 137 SRNVRYREQFDAVVSRAVANLASLSEFCLPYVK 169
>gi|156311337|ref|XP_001617769.1| hypothetical protein NEMVEDRAFT_v1g225810 [Nematostella vectensis]
gi|156195704|gb|EDO25669.1| predicted protein [Nematostella vectensis]
Length = 288
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSG 81
E L + L+ +W+ KIN++S ++ + RHV SL + + ID+G+G
Sbjct: 1 EQLAQFGQLKELYAEWNDKINVISRKDIDQLYERHVLHSLSIAAVCHFDDGASIIDVGTG 60
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GGFPGI +I ++E LV+ I K K + + + R ++
Sbjct: 61 GGFPGIPLAIYFPNVEFLLVDSIGKKIKVVNEVAAAIG--LKNVTAIHGRAEDVKN--RQ 116
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D +RA+A L L + + +
Sbjct: 117 FDYAVSRAVAPLGKLWGWVGKMIKE 141
>gi|86132587|ref|ZP_01051180.1| glucose inhibited division protein [Dokdonia donghaensis MED134]
gi|85816829|gb|EAQ38014.1| glucose inhibited division protein [Dokdonia donghaensis MED134]
Length = 209
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + +++ +E+ L+ W+ KIN+VS +++ ++RHV + Q
Sbjct: 2 DIILKYFPDLTDTQIEQFSKLKDLYQDWNLKINVVSRKDIDEIYLRHVLHSLGIAKVQTF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPG+ +I + LV+ I K K + +
Sbjct: 62 NPGASIMDVGTGGGFPGVPLAILHPEVNFHLVDSIGKKIKVVNEVVE-----GLGITNVK 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D I +RA+A ++T + + + +K
Sbjct: 117 TTNDRVENVPGQYDFIVSRAVAQMETFVRWVRGHIAKK 154
>gi|223041388|ref|ZP_03611592.1| glucose-inhibited division protein B [Actinobacillus minor 202]
gi|223017778|gb|EEF16184.1| glucose-inhibited division protein B [Actinobacillus minor 202]
Length = 204
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L +++ + ++L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MLAKLDRLLTQANISLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSQHLQGQQFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNAIRELKLTN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYQEQ--QFDGVLSRAFASLNDMVDWCYHL 153
>gi|262278902|ref|ZP_06056687.1| methyltransferase GidB [Acinetobacter calcoaceticus RUH2202]
gi|299770414|ref|YP_003732440.1| 16S rRNA methyltransferase GidB [Acinetobacter sp. DR1]
gi|262259253|gb|EEY77986.1| methyltransferase GidB [Acinetobacter calcoaceticus RUH2202]
gi|298700502|gb|ADI91067.1| 16S rRNA methyltransferase GidB [Acinetobacter sp. DR1]
Length = 210
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E L L + + W+K NL + ++ ++H+ DSL + P + +D
Sbjct: 16 GLSLSDEALALLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILNDLPEGRL-LD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGG PG+I ++ + L++S KK FL+ + V E
Sbjct: 75 VGTGGGMPGMIIALCQPQRQ---CVLLDSNGKKIRFLKQFIADLKLSNVVAVQTRVENQD 131
Query: 138 MI---TTCDVISARALADLDTLLEYSFPWLYQ 166
I DVI++RA A L ++ + P+L+Q
Sbjct: 132 TIDELGQFDVITSRAFASLTDFVDAAQPYLHQ 163
>gi|255527594|ref|ZP_05394458.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296186792|ref|ZP_06855193.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
gi|255508727|gb|EET85103.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296048506|gb|EFG87939.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
Length = 239
Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I+ + +T K + + W++KINL + E + +H D +++F+
Sbjct: 5 DIMSQACKDVALPFNEDTYNKFSQYKDMIKVWNEKINLTAIVDDEQIFKKHFIDCIKIFK 64
Query: 68 LHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P ID+G+G GFPGI I + + L++S NK+ +FL VV K
Sbjct: 65 FSPLKQAKNVIDIGTGAGFPGIPIKIM---KQELNLILLDSLNKRINFLNEVVSKINLNN 121
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P+ DV +RA+A+L L E P++
Sbjct: 122 VETIHGRAEDFSRQPKYREQVDVAVSRAVANLAVLSELCIPYVK 165
>gi|153938497|ref|YP_001392997.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|170754945|ref|YP_001783276.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|166224585|sp|A7GJN7|RSMG_CLOBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806440|sp|B1IHR7|RSMG_CLOBK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152934393|gb|ABS39891.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|169120157|gb|ACA43993.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|295320972|gb|ADG01350.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
230613]
Length = 239
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + + +L + L +W+KKINL + ++ +H D +++F+ P
Sbjct: 15 NLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSL 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+ G G G E + L++S K+ +FL V+ + + R ++
Sbjct: 75 IDIGTG-AGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYA 133
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D+ +RA+A+L L E+ P++ +
Sbjct: 134 QEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|118582019|ref|YP_903269.1| methyltransferase GidB [Pelobacter propionicus DSM 2379]
gi|189045874|sp|A1AV41|RSMG_PELPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118504729|gb|ABL01212.1| 16S rRNA m(7)G-527 methyltransferase [Pelobacter propionicus DSM
2379]
Length = 221
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +S E L + F KW+ ++NL + + + ++H+ DSL + + +D
Sbjct: 18 QFELSGEQLRDFQLFAMELKKWNLRVNLTAITDDGEIAVKHIADSLFLARQLDSTERVLD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G P I I + +E V+ + K + +++ + RI+
Sbjct: 78 VGSGAGIPAIPLKIAIPGLETVSVDAVGKKIHFQRHVARLLRLQGFQA--LHARIESLHA 135
Query: 138 -MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI++RA +DL + + P L +
Sbjct: 136 THGRSFDVITSRAFSDLGLFVRLTAPLLAE 165
>gi|170760430|ref|YP_001788983.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
gi|193806441|sp|B1KUB0|RSMG_CLOBM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169407419|gb|ACA55830.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
Length = 239
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+ + + + + L +W+KK+NL + E+ +H D +++F+ P
Sbjct: 15 NLDFNDKKYNQFISYKNLIQEWNKKVNLTAIVEDEEIIKKHFIDCIKIFKASPIGEAKSL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
ID+G+G GFPGI I I+ + L++S K+ +FL V+ + + R ++
Sbjct: 75 IDIGTGAGFPGIPIKILREDIK---ITLLDSLQKRINFLNIVIGDLKLKDIQCLHGRAED 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
Q DV +RA+A+L L E+ P++ +
Sbjct: 132 YAQEAEHRQKYDVAVSRAVANLAVLSEFCIPFVKK 166
>gi|121592463|ref|YP_984359.1| 16S rRNA methyltransferase GidB [Acidovorax sp. JS42]
gi|189039375|sp|A1W208|RSMG_ACISJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120604543|gb|ABM40283.1| 16S rRNA m(7)G-527 methyltransferase [Acidovorax sp. JS42]
Length = 226
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 18/157 (11%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++S + +L F L KW+K NL + ++ H+ DSL
Sbjct: 21 GLDLSEAQITQLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVPPLRRHVAQRG 80
Query: 76 -----------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+GSGGG PG++ +I ++ V+ +++ KKA+F++
Sbjct: 81 QDSAARPGARLLDVGSGGGLPGVVFAICCPEVD---VSCVDTVAKKAAFIQQAAGTLGLS 137
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ DV+S RA A L +S
Sbjct: 138 N--LHGIHARVETLAGPFDVVSCRAFAALADFTAWSR 172
>gi|291005730|ref|ZP_06563703.1| methyltransferase GidB [Saccharopolyspora erythraea NRRL 2338]
Length = 235
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E F L + + L+ ++ W RH+ +S + +L P +D+GSG G PGI
Sbjct: 27 ERFAELLREHGVRRGLIGPRELDRLWERHLLNSAVLAELLPPNCRVVDVGSGAGLPGIPL 86
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
SI +E + L+E ++ ++L+ V+ + +V R +E + + DV++A
Sbjct: 87 SIARPDLE---LTLLEPMARRVAWLQEVITELGLNAEVMRGRAEEGPVRERLADQDVVTA 143
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+A + L ++ P L +
Sbjct: 144 RAVAPMARLAKWCLPLLRPE 163
>gi|290968162|ref|ZP_06559707.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
gi|290781837|gb|EFD94420.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
Length = 237
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
++ + +E+ F+ ++ +K +NL + ++ ++H+ DSL + +
Sbjct: 14 GLSIQPQQMEQYTKFFEYLVEINKVMNLTKLTAPDEVALKHMADSLSCYDEEIFKVRATV 73
Query: 77 -DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
DLG+G GFPGI I ++ + +S K+ F+ V + V R ++
Sbjct: 74 LDLGTGAGFPGIPLKIYRPDLQ---LTFFDSLKKRLQFISCVTDLLQIKQTVCLHGRAED 130
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
D++++RA+A L L E++ P++ +
Sbjct: 131 LAHQDVYREQFDLVTSRAVARLSVLAEWALPYVKK 165
>gi|332851808|ref|ZP_08433733.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013150]
gi|332865812|ref|ZP_08436596.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013113]
gi|332729815|gb|EGJ61150.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013150]
gi|332735024|gb|EGJ66109.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013113]
Length = 210
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D
Sbjct: 16 GLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPAGRL-LD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGG PG+I ++ L++S KK FL+ + + + E
Sbjct: 75 VGTGGGMPGMIIALCQPE---RSCVLLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENQD 131
Query: 138 MI---TTCDVISARALADLDTLLEYSFPWLYQK 167
I DVI++RA A L +E + P+L+++
Sbjct: 132 TIDELGQFDVITSRAFASLTDFVEAARPYLHEQ 164
>gi|312144697|ref|YP_003996143.1| methyltransferase GidB [Halanaerobium sp. 'sapolanicus']
gi|311905348|gb|ADQ15789.1| methyltransferase GidB [Halanaerobium sp. 'sapolanicus']
Length = 243
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
MK + + + LN ++ S++ LE+L +Y F +KK NL S + E+ +H
Sbjct: 1 MKKNKVDFVDKLETGLNQLDIYYSQQQLEQLWEYYCFFETENKKYNLSSITKAEEVIKKH 60
Query: 59 VED--SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
D + W+D+G+G GFPG++ + L L++S KK +FL+
Sbjct: 61 FLDSLVILNHLDLTGKKSWLDIGTGAGFPGLVLKLFLPG---DSFYLLDSSAKKINFLKQ 117
Query: 117 VVQKTAARG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ K +G + R ++ + + D +++RA+A L+ LLEY+ P+L
Sbjct: 118 LSYKLDLQGIRATHGRAEDLAKADGWRASFDHVTSRAVASLNILLEYTVPFLK 170
>gi|260550090|ref|ZP_05824304.1| ribosomal RNA small subunit methyltransferase G [Acinetobacter sp.
RUH2624]
gi|260406845|gb|EEX00324.1| ribosomal RNA small subunit methyltransferase G [Acinetobacter sp.
RUH2624]
Length = 210
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D
Sbjct: 16 GLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPPGRL-LD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGG PG+I ++ L++S KK FL+ + + V E
Sbjct: 75 VGTGGGMPGMIIALCQPE---RSCVLLDSNGKKIRFLKQFIADLKLKNVVAVQTRVENQD 131
Query: 138 MI---TTCDVISARALADLDTLLEYSFPWLYQ 166
I DVI++RA A L +E + P+L++
Sbjct: 132 TIDELGQFDVITSRAFASLTDFVEAARPYLHE 163
>gi|222109271|ref|YP_002551535.1| 16S rRNA methyltransferase gidb [Acidovorax ebreus TPSY]
gi|254766889|sp|B9M9W4|RSMG_DIAST RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221728715|gb|ACM31535.1| methyltransferase GidB [Acidovorax ebreus TPSY]
Length = 226
Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 18/157 (11%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++S + +L F L KW+K NL + ++ H+ DSL
Sbjct: 21 GLDLSEAQITQLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVPPLRRHVARRG 80
Query: 76 -----------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+GSGGG PG++ +I ++ V+ +++ KKA+F++
Sbjct: 81 QGGAIHLGARLLDVGSGGGLPGVVFAICCPEVD---VSCVDTVAKKAAFIQQAAGTLGLS 137
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ DV+S RA A L +S
Sbjct: 138 N--LHGIHARVETLAGPFDVVSCRAFAALADFTAWSR 172
>gi|167620985|ref|ZP_02389616.1| methyltransferase GidB [Burkholderia thailandensis Bt4]
Length = 213
Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 8/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + + +D
Sbjct: 13 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGARGAAATALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP- 136
+GSGGG PGI+ +I L + L ++++ K+ + + ++ V R++
Sbjct: 73 VGSGGGLPGIVLAIALPGWQVTLNDIVQKKSAFQNQAKAELK--LGNLSVVTGRVETLRP 130
Query: 137 --QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 131 GADVQGKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|83720015|ref|YP_443811.1| 16S rRNA methyltransferase GidB [Burkholderia thailandensis E264]
gi|123536042|sp|Q2STD8|RSMG_BURTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83653840|gb|ABC37903.1| methyltransferase GidB [Burkholderia thailandensis E264]
Length = 231
Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 8/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + + +D
Sbjct: 31 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGARGAAATALD 90
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP- 136
+GSGGG PGI+ +I L + L ++++ K+ + + ++ V R++
Sbjct: 91 VGSGGGLPGIVLAIALPGWQVTLNDIVQKKSAFQNQAKAELK--LGNLSVVTGRVETLRP 148
Query: 137 --QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 149 GADVQGKFDVIVSRAFADLADFVTLARHLVAP 180
>gi|325576879|ref|ZP_08147494.1| glucose inhibited division protein B [Haemophilus parainfluenzae
ATCC 33392]
gi|325161085|gb|EGC73203.1| glucose inhibited division protein B [Haemophilus parainfluenzae
ATCC 33392]
Length = 203
Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L ++ ++L L KW+K NL S ++ ++H+ DS+ V
Sbjct: 1 MKAKLENLLTQAEIQLTDLQKDQLIQLVQLLNKWNKAYNLTSVRDPQEMLVKHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG+ +I + + L++S K+ SF+R V++
Sbjct: 60 VSSYLQGDRFIDVGTGPGLPGLPLAIINPTKQ---FVLLDSLGKRISFIRNAVRELGLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q D + +RA A L + ++ Q
Sbjct: 117 VEPVLSRVEEYQSEQKFDGVLSRAFASLKDMTDWCHHLPKQ 157
>gi|219871647|ref|YP_002476022.1| 16S rRNA methyltransferase GidB [Haemophilus parasuis SH0165]
gi|254766893|sp|B8F6X2|RSMG_HAEPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219691851|gb|ACL33074.1| methyltransferase, glucose-inhibited division protein B
[Haemophilus parasuis SH0165]
Length = 203
Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L ++ + ++L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MLAKLDRLLSQANIPLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSQHLQGQQFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNAIRELKLTN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYQEQ--QFDGVLSRAFASLNDMVDWCYHL 153
>gi|85706895|ref|ZP_01037985.1| glucose-inhibited division protein B [Roseovarius sp. 217]
gi|85668506|gb|EAQ23377.1| glucose-inhibited division protein B [Roseovarius sp. 217]
Length = 201
Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 63/147 (42%), Positives = 92/147 (62%), Gaps = 4/147 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DL 78
+VSRET E+L+ + L +KW+ +INLVS ++++ W RH DS +++ L P+P DL
Sbjct: 6 DVSRETQERLKVYADLLVKWNPRINLVSKASLDQMWTRHFADSAQIYDLAPHPVEHWVDL 65
Query: 79 GSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ ++ + LIES +KA+FLR V+++T A V RI+ A
Sbjct: 66 GSGGGFPGLVVAVLAQETGSPDRMTLIESDARKAAFLRVVIRETGAAATVLNERIETAEP 125
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
T V+SARALADLD LL ++ L
Sbjct: 126 QAAT--VLSARALADLDGLLAFAERHL 150
>gi|148907902|gb|ABR17072.1| unknown [Picea sitchensis]
Length = 301
Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR------------VFQL 68
+S + E+ F L+W++++NL + + RHVEDSL +
Sbjct: 71 LSMKQQEQTSLFVNTLLEWNQRMNLTAVTEHCAVMERHVEDSLALLPIIENAYKNNCPTM 130
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
+D+GSG G PGII +I + + LIES K+ FL +VV + +V
Sbjct: 131 ESVRLNLVDVGSGAGLPGIILAIARPDWQ---ITLIESLQKRCFFLEHVVDVSGLSNAQV 187
Query: 128 FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++A P D+ ARA+AD+ L EY P +
Sbjct: 188 VRIRAEDAGQNPDFREKYDIAVARAVADMRILAEYCLPLVR 228
>gi|170729226|ref|YP_001763252.1| 16S rRNA methyltransferase GidB [Shewanella woodyi ATCC 51908]
gi|193806451|sp|B1KQ44|RSMG_SHEWM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169814573|gb|ACA89157.1| methyltransferase GidB [Shewanella woodyi ATCC 51908]
Length = 206
Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + E ++L F + KW+K NL S + IRH+ DSL V H
Sbjct: 6 LDEYLAEMNLSATTEQKKQLVGFVEMLNKWNKAYNLTSIRDPQQMLIRHIMDSLAV-SKH 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 65 LVGERFIDVGTGPGLPGIPLAIMNPE---RSFVLLDSLGKRIRFQKQVQHELGIHNISSV 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA + D + +RA A ++ +L +
Sbjct: 122 ESRVEAFEPEVKFDGVLSRAFASIEDMLHWCHHL 155
>gi|332533708|ref|ZP_08409567.1| ribosomal RNA small subunit methyltransferase G [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036872|gb|EGI73333.1| ribosomal RNA small subunit methyltransferase G [Pseudoalteromonas
haloplanktis ANT/505]
Length = 206
Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ + ++L + L KW+K NL S E+ I+H+ DS V H +ID
Sbjct: 14 DIALTEKQQQQLVRYVELLDKWNKAYNLTSVRLPEEMMIKHIMDS-LVVAPHLPGHHYID 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI+ +I L + + L++S K+ FL +V + E Q
Sbjct: 73 VGTGPGLPGIVLAIALPNTQ---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEEYQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D + +RA A L ++++ +
Sbjct: 130 PSVKLDGVLSRAFASLQDMVDWCSHLI 156
>gi|323144402|ref|ZP_08079010.1| 16S rRNA methyltransferase GidB [Succinatimonas hippei YIT 12066]
gi|322415855|gb|EFY06581.1| 16S rRNA methyltransferase GidB [Succinatimonas hippei YIT 12066]
Length = 220
Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
E ++KL L KW+K +NL S +D + H+ DS V D+G+
Sbjct: 30 FDDEKVQKLAELVILLCKWNKALNLTSIKDPDDMVVLHILDS-AVISPLLTGKNIADVGT 88
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
G GFPG++ +I LI+S KK SF++ + + R + ++
Sbjct: 89 GAGFPGLVLAILNPDK---HFTLIDSVAKKLSFVKSASVQLKLENVTLINDRCENIKPLV 145
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D I +RA A L ++E+ L K
Sbjct: 146 -PFDCIVSRAFAPLGRMVEWCIHLLDDK 172
>gi|294792405|ref|ZP_06757552.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
gi|294456304|gb|EFG24667.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
Length = 244
Score = 97.8 bits (242), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLG 79
+ E + L +Y ++ +K +NL +++ ++H+ DSL + ID+G
Sbjct: 25 TEEQAKDLYMYYAHMIETNKYLNLTGIIDMKEVVVKHMIDSLSCYDSEIIKSGMTIIDVG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--AP 136
+G GFPGI +I S++ V L +S K+ +FL V+ K R ++
Sbjct: 85 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLTFLESVIDKLKLTNCTTLHGRAEDLSHQ 141
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 142 DYRESFDIATSRAVARLPILLEWTVPYVKE 171
>gi|302800848|ref|XP_002982181.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
gi|300150197|gb|EFJ16849.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
Length = 225
Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS------- 73
+ + + + L W++++NL S + ++ RH+ DSL + +
Sbjct: 5 LDPSQSKLVSAYIDKLLVWNQRMNLTSVTDRKEMMERHIRDSLSLLPVIEKHCSLSDGNL 64
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+GSG G PGII I + + + LIES KK FL V + V R
Sbjct: 65 KVVDIGSGAGLPGIIFGIARPNWK---ITLIESIQKKCDFLEDAVLAVSLQNVSVVRARA 121
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+E + T DV ARA+A++ L E P++
Sbjct: 122 EEKGRDAEFRETFDVAVARAVAEMRVLAELCLPFVA 157
>gi|302825464|ref|XP_002994346.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
gi|300137758|gb|EFJ04589.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
Length = 272
Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS------- 73
+ + + + L W++++NL S + ++ RH+ DSL + +
Sbjct: 37 LDPSQSKLVSAYIDKLLDWNQRMNLTSVTDRKEVMERHIRDSLSLLPVIEKHCSLSDGSL 96
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+GSG G PGII I S + + LIES KK FL V + V R
Sbjct: 97 KVVDIGSGAGLPGIIFGIARPSWK---ITLIESIQKKCDFLEDAVLAVSLQNVSVVRARA 153
Query: 133 QEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+E + T DV ARA+A++ L E P++
Sbjct: 154 EEKGRDVEFRETFDVAVARAVAEMRVLAELCLPFVA 189
>gi|168183719|ref|ZP_02618383.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|237797098|ref|YP_002864650.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
gi|259495491|sp|C3KWJ3|RSMG_CLOB6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|182673204|gb|EDT85165.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|229261829|gb|ACQ52862.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
Length = 239
Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + + + + L +W+KKINL + E+ +H D +++F+ P
Sbjct: 15 NLDFNDKKYNQFISYKNLIQEWNKKINLTAIVEDEEIIKKHFIDCIKIFKSSPIGEAKSL 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+ G G G E + L++S K+ +FL V+ + + R ++
Sbjct: 75 IDIGTG-AGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYA 133
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D+ +RA+A+L L E+ P++ +
Sbjct: 134 QEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|160889787|ref|ZP_02070790.1| hypothetical protein BACUNI_02218 [Bacteroides uniformis ATCC 8492]
gi|156860779|gb|EDO54210.1| hypothetical protein BACUNI_02218 [Bacteroides uniformis ATCC 8492]
Length = 206
Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + +++ E + Y L+L W+ KIN++S +E+ + HV +
Sbjct: 2 DLILKYFPDLTEEQKRQFAALYDLYLDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ L++S KK + + F
Sbjct: 62 RPGTQIMDLGTGGGFPGIPLAILFPEVQFH---LVDSIGKKVRVASEIANSIGLKNITFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
E + D + +RA+ L LL+
Sbjct: 119 HARAEEEK--GKFDFVVSRAVMPLTDLLKI 146
>gi|134281460|ref|ZP_01768168.1| methyltransferase GidB [Burkholderia pseudomallei 305]
gi|134247127|gb|EBA47213.1| methyltransferase GidB [Burkholderia pseudomallei 305]
Length = 213
Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 8/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 13 LSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP- 136
+GSGGG PG++ +I L L +++ K+ + ++ ++ V R++
Sbjct: 73 VGSGGGLPGVVLAIALPGWRVTLNDIVHKKSAFQNQVKAELK--LGNLSVVTGRVETLRP 130
Query: 137 --QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 131 GADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|332531224|ref|ZP_08407137.1| 16S rRNA methyltransferase GidB [Hylemonella gracilis ATCC 19624]
gi|332039331|gb|EGI75744.1| 16S rRNA methyltransferase GidB [Hylemonella gracilis ATCC 19624]
Length = 225
Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----- 64
L + +S +L + L KW+K NL + E+ H+ DS+
Sbjct: 14 LESGAAALGLALSDTQRTQLLDYLALVQKWNKVYNLTALRDAEEMLTHHLLDSMAVIAPL 73
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
Q P +D+GSG G PG++ +I I+ V +++ KKA+F++ V
Sbjct: 74 RRQTQGQPVRLLDVGSGAGLPGVVIAICCPEID---VTCVDTVAKKATFIQQVAIALKLP 130
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ DV+S+RA A L +SF
Sbjct: 131 --HLHGVHARVESLSGPFDVVSSRAFASLADFTAWSF 165
>gi|167854765|ref|ZP_02477543.1| methyltransferase GidB [Haemophilus parasuis 29755]
gi|167854063|gb|EDS25299.1| methyltransferase GidB [Haemophilus parasuis 29755]
Length = 203
Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L ++ + ++L F L KW+K NL S ++ ++H+ DS V
Sbjct: 1 MLAKLDRLLSQANIPLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 60 VSQHLQGQQFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNAIRELKLTN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYQEQ--QFDGVLSRAFASLNDMVDWCYHL 153
>gi|310817161|ref|YP_003965125.1| methyltransferase GidB [Ketogulonicigenium vulgare Y25]
gi|308755896|gb|ADO43825.1| methyltransferase GidB [Ketogulonicigenium vulgare Y25]
Length = 207
Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 7/154 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
LL NVSRET L F L LKW++KINL+S+++ ++ W RH+ DS++V+ P
Sbjct: 7 LLPNVNVSRETEALLREFAALILKWTQKINLISAASEDEIWQRHILDSVQVYTALPQDFQ 66
Query: 75 ---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
W D GSGGG PGII ++ G +V ++ES +KA+FLR V+ +V +
Sbjct: 67 WKTWADFGSGGGLPGIIIAVLARETGGQVV-MVESDQRKATFLRTAVRSLGLTNARVESK 125
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
RI+ P + + DVISARALA LD L ++ P L
Sbjct: 126 RIEALPAL--SADVISARALAALDMLCAFAAPHL 157
>gi|262375378|ref|ZP_06068611.1| 16S rRNA methyltransferase GidB [Acinetobacter lwoffii SH145]
gi|262309632|gb|EEY90762.1| 16S rRNA methyltransferase GidB [Acinetobacter lwoffii SH145]
Length = 210
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ +S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 8 LKQGSQALGLELSDEALNLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + +D+G+GGG PG+I ++ E L++S KK FL+ + + +
Sbjct: 68 PVGRL-LDIGTGGGMPGMIIALCQPERE---CVLLDSNGKKIRFLKQFIADLKLKNVIAV 123
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + DVI++RA A L ++ S P+++++
Sbjct: 124 QTRVENEDSINELGQFDVITSRAFASLTDFVDASKPYMHEQ 164
>gi|119471637|ref|ZP_01614022.1| glucose-inhibited division protein B [Alteromonadales bacterium
TW-7]
gi|119445416|gb|EAW26703.1| glucose-inhibited division protein B [Alteromonadales bacterium
TW-7]
Length = 206
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ + ++L + L KW+K NL S ++ ++H+ DS V H +ID
Sbjct: 14 DISLTDKQQQQLVRYVELLDKWNKAYNLTSVRLPQEMMVKHIMDS-LVVAPHLPGHHYID 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI+ +I L + + L++S K+ FL +V + E Q
Sbjct: 73 VGTGPGLPGIVLAIALPNTQ---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEEYQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D + +RA A L ++++ +
Sbjct: 130 PSVKLDGVLSRAFASLQDMVDWCSHLI 156
>gi|322421973|ref|YP_004201196.1| methyltransferase GidB [Geobacter sp. M18]
gi|320128360|gb|ADW15920.1| methyltransferase GidB [Geobacter sp. M18]
Length = 217
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 5/164 (3%)
Query: 6 SN----SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
N +L ++ L L+ F KW++KINL + + E ++H+ D
Sbjct: 1 MNQRAKDLLNKGAGELGIELTPAQLNALDLFAEELKKWNRKINLTAITDDEGIAVKHLVD 60
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + ++ +D+GSGGGFPGI + +E V+ + K ++
Sbjct: 61 SLSLLKVVRGGGRLLDIGSGGGFPGIPVKLVQPDLEIVSVDAVVKKISFQKQAVRLLNLV 120
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A + D + +RA +D+ + +E + P L
Sbjct: 121 GFNAMHVRAETL-AADYAASFDWVVSRAFSDIPSFVEMALPVLK 163
>gi|77166530|ref|YP_345055.1| glucose inhibited division protein [Nitrosococcus oceani ATCC
19707]
gi|254435732|ref|ZP_05049239.1| methyltransferase GidB [Nitrosococcus oceani AFC27]
gi|123593189|sp|Q3J6M1|RSMG_NITOC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76884844|gb|ABA59525.1| 16S rRNA m(7)G-527 methyltransferase [Nitrosococcus oceani ATCC
19707]
gi|207088843|gb|EDZ66115.1| methyltransferase GidB [Nitrosococcus oceani AFC27]
Length = 214
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 4/159 (2%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL LL + + ++ L + L KW++ NL + ++ +HV DSL + +
Sbjct: 8 ILEKGLLLLGVELDQSQVKVLLAYLRLLEKWNQHYNLTAIKNSKEMISKHVLDSLSI-ES 66
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +D+GSG G PGI +I E L++S KK FL +
Sbjct: 67 YLEGRRILDVGSGAGLPGIPLAIARPGCE---FVLLDSNAKKTRFLFQASVELGLPNISV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + D I ARA A L + + +
Sbjct: 124 VSERVEVYRPSHLFDTIIARAFAKLVDFVAQAEHLCKPR 162
>gi|301163121|emb|CBW22670.1| putative glucose-inhibited cell division protein [Bacteroides
fragilis 638R]
Length = 206
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 2 KLLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +DLG+GGGFPGI +I + LV+ I K + A+ + +
Sbjct: 62 RAGSSVMDLGTGGGFPGIPLAILFPDTKFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E Q D + +RA+ L L++ + K+
Sbjct: 120 ARAEEEKQT---FDFVVSRAVMPLADLIKIIRKNISPKQ 155
>gi|184154551|ref|YP_001842891.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum IFO 3956]
gi|238689197|sp|B2GF22|RSMG_LACF3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|183225895|dbj|BAG26411.1| cell division protein GidB [Lactobacillus fermentum IFO 3956]
Length = 245
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N R L + ++ + + +Y L ++ ++ +NL + + + +++H DSL
Sbjct: 1 MNPEEFRQALLDHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+P D+G+G GFP + I +E V +++S NK+ +FL +
Sbjct: 61 GAFAYPKLQSQALTLCDIGAGAGFPSLPLKIAFPQLE---VTIVDSLNKRINFLADLCDD 117
Query: 121 TAARGK-VFACRIQEAP----QMITTCDVISARALADLDTLLEYSFP 162
G + R + D+++ARA+A L L E P
Sbjct: 118 LGLTGVYLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLP 164
>gi|313146687|ref|ZP_07808880.1| glucose-inhibited division protein B [Bacteroides fragilis 3_1_12]
gi|313135454|gb|EFR52814.1| glucose-inhibited division protein B [Bacteroides fragilis 3_1_12]
Length = 206
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 2 ELLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +DLG+GGGFPGI +I + LV+ I K + A+ + +
Sbjct: 62 RPGSKVMDLGTGGGFPGIPLAILFPDTKFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R +E Q D + +RA+ L L++
Sbjct: 120 ARAEEEKQT---FDFVVSRAVMPLADLIKI 146
>gi|293608265|ref|ZP_06690568.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828838|gb|EFF87200.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122003|gb|ADY81526.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter calcoaceticus PHEA-2]
Length = 210
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D
Sbjct: 16 GLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPTGRL-LD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGG PG+I ++ L++S KK FL+ + + V E
Sbjct: 75 VGTGGGMPGMIIALCQPE---RSCVLLDSNGKKIRFLKQFIADLKLKNVVAVQTRVENQD 131
Query: 138 MI---TTCDVISARALADLDTLLEYSFPWLYQ 166
I DVI++RA A L ++ + P+L+Q
Sbjct: 132 TIDELGQFDVITSRAFASLTDFVDAAQPYLHQ 163
>gi|60681565|ref|YP_211709.1| 16S rRNA methyltransferase GidB [Bacteroides fragilis NCTC 9343]
gi|81315369|sp|Q5LDN0|RSMG_BACFN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|60492999|emb|CAH07778.1| putative glucose-inhibited cell division protein [Bacteroides
fragilis NCTC 9343]
Length = 206
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 2 KLLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARIIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +DLG+GGGFPGI +I + LV+ I K + A+ + +
Sbjct: 62 RAGSSVMDLGTGGGFPGIPLAILFPDTKFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E Q D + +RA+ L L++ + K+
Sbjct: 120 ARAEEEKQT---FDFVVSRAVMPLADLIKIIRKNISPKQ 155
>gi|303230681|ref|ZP_07317431.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
gi|302514736|gb|EFL56728.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
Length = 250
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLG 79
+++ + +Y ++ +K +NL + +++ ++H+ DSL + S ID+G
Sbjct: 31 TQQQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDSKIIKSGSSIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--AP 136
+G GFPGI +I ++ V L +S K+ +FL V+ + K R ++
Sbjct: 91 TGAGFPGIPLAIYDRTL---HVTLFDSLKKRLTFLETVIDELQLTNCKTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ Q
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKQ 177
>gi|168181108|ref|ZP_02615772.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
gi|182668128|gb|EDT80107.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
Length = 239
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + + +L + L +W+KKINL + ++ +H D +++F+ P
Sbjct: 15 NLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSL 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+ G G G E + L++S K+ +FL V+ + + R ++
Sbjct: 75 IDIGTG-AGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYA 133
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D+ +RA+A+L L E+ P++ +
Sbjct: 134 QEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|114049511|ref|YP_740061.1| 16S rRNA methyltransferase GidB [Shewanella sp. MR-7]
gi|123130902|sp|Q0HPF1|RSMG_SHESR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113890953|gb|ABI45004.1| methyltransferase GidB [Shewanella sp. MR-7]
Length = 206
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L N+ + E ++L F + KW+K NL S E +RH+ DS V H
Sbjct: 10 LAEINLPATAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDS-LVVSPHLQGE 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 69 HFIDVGTGPGLPGIPLAIMNPDK---TFVLLDSLGKRIRFQKQVAFELGIHNISSIESRV 125
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 126 EAYQPEQKFDGVLSRAFASIHDMLTWCHHL 155
>gi|117918460|ref|YP_867652.1| 16S rRNA methyltransferase GidB [Shewanella sp. ANA-3]
gi|166224614|sp|A0KR27|RSMG_SHESA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117610792|gb|ABK46246.1| methyltransferase GidB [Shewanella sp. ANA-3]
Length = 206
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L N+ + E ++L F + KW+K NL S E +RH+ DS V H
Sbjct: 10 LAEINLPATAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDS-LVVSPHLQGE 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 69 RFIDVGTGPGLPGIPLAIMNPDK---TFVLLDSLGKRIRFQKQVAFELGIHNISSIESRV 125
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 126 EAYQPEQKFDGVLSRAFASIHDMLTWCHHL 155
>gi|254447601|ref|ZP_05061067.1| methyltransferase GidB [gamma proteobacterium HTCC5015]
gi|198262944|gb|EDY87223.1| methyltransferase GidB [gamma proteobacterium HTCC5015]
Length = 225
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L KW+K NL + H+ DSL + +D+G+G G PGI +
Sbjct: 39 DYLALLEKWNKAYNLTAVRDPSKMVSHHLLDSLAIAPFIQGEC-ILDVGTGAGLPGIPLA 97
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
I + L++S KK F+ ++ E + D I++RA
Sbjct: 98 IAFPEWQ---FTLLDSNGKKTRFVSAAKRELGLTNVDVVQARVETLAVERGFDTITSRAF 154
Query: 151 ADLDTLLEYSFPWLYQ 166
++L ++E++ L
Sbjct: 155 SELQPMMEWTQHLLAP 170
>gi|254184035|ref|ZP_04890626.1| methyltransferase GidB [Burkholderia pseudomallei 1655]
gi|189039672|sp|A3P103|RSMG_BURP0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|184214567|gb|EDU11610.1| methyltransferase GidB [Burkholderia pseudomallei 1655]
Length = 232
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 32 LSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 92 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 148
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 149 PGADVPAKFDVIVSRAFADLADFVTLARHLVAP 181
>gi|126454474|ref|YP_001068274.1| methyltransferase GidB [Burkholderia pseudomallei 1106a]
gi|242317084|ref|ZP_04816100.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1106b]
gi|254194534|ref|ZP_04900965.1| methyltransferase GidB [Burkholderia pseudomallei S13]
gi|126228116|gb|ABN91656.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1106a]
gi|169651284|gb|EDS83977.1| methyltransferase GidB [Burkholderia pseudomallei S13]
gi|242140323|gb|EES26725.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1106b]
Length = 213
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 13 LSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 73 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 129
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 130 PGADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|187777374|ref|ZP_02993847.1| hypothetical protein CLOSPO_00930 [Clostridium sporogenes ATCC
15579]
gi|187774302|gb|EDU38104.1| hypothetical protein CLOSPO_00930 [Clostridium sporogenes ATCC
15579]
Length = 239
Score = 97.4 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + + + + L +W+KKINL + E+ +H D +++F+ P
Sbjct: 15 NLDFNDKKYNQFISYKNLIQEWNKKINLTAIVKDEEIIKKHFIDCIKIFKASPMAEAKSL 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+ G G G E + L++S K+ +FL V+ + + R ++
Sbjct: 75 IDIGTG-AGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYA 133
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D+ +RA+A+L L E+ P++ +
Sbjct: 134 QEIQHRQRYDIAVSRAVANLAVLSEFCIPFVRK 166
>gi|50085458|ref|YP_046968.1| 16S rRNA methyltransferase GidB [Acinetobacter sp. ADP1]
gi|55976394|sp|Q6F9W7|RSMG_ACIAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49531434|emb|CAG69146.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter sp. ADP1]
Length = 212
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ ++S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 8 LKQGSQALGLDLSDEVLGLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + +D+G+GGG PG+I ++ L++S KK FL+ + + V
Sbjct: 68 PQGRL-LDVGTGGGMPGMIIALCQPERN---CVLLDSNGKKIRFLKQFIADLKLKNVVAV 123
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q + DVI++RA A L ++ + P++Y+
Sbjct: 124 QTRVENEESIQELGKFDVITSRAFASLLDFVDAARPYMYE 163
>gi|307943444|ref|ZP_07658788.1| 16S rRNA methyltransferase GidB [Roseibium sp. TrichSKD4]
gi|307773074|gb|EFO32291.1| 16S rRNA methyltransferase GidB [Roseibium sp. TrichSKD4]
Length = 217
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETL++L+ + L LKW K NL++ ST+ D W+RHV DSL+ P +W+D+G
Sbjct: 18 DVSRETLDRLQIYVDLLLKWQKAQNLIAPSTIPDVWVRHVADSLQTHWSLPGAKVWVDIG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ-- 137
SGGGFPG++T+I L+ ++ V++IES KKA+FLR +++T + G V A RI+ +
Sbjct: 78 SGGGFPGVVTAIMLADVKDAHVHMIESNQKKATFLRTALRETGSNGTVHAGRIESVAKSW 137
Query: 138 MITTCDVI 145
D +
Sbjct: 138 KHGPVDAV 145
>gi|325285552|ref|YP_004261342.1| Ribosomal RNA small subunit methyltransferase G [Cellulophaga
lytica DSM 7489]
gi|324321006|gb|ADY28471.1| Ribosomal RNA small subunit methyltransferase G [Cellulophaga
lytica DSM 7489]
Length = 226
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVF 66
++A+ + + +++ E + L+ W++KIN+VS +++ ++RHV S F
Sbjct: 16 MKADIIFKYFPDLTEEQKQHFIQLEALYADWNQKINVVSRKDIDEIYLRHVLHSTGIAKF 75
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
Q + +D+G+GGGFPGI +I + L+++ KK +++VV
Sbjct: 76 QQFLPGTTVLDVGTGGGFPGIPLAILFPETQ---FTLVDAIGKKIKVVQHVVDGLGLTN- 131
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + D I +RA+A + T + + + ++
Sbjct: 132 -VTAKHMRVEDLDAKFDFIVSRAVAAMPTFVRWIKGRIKKE 171
>gi|126730102|ref|ZP_01745914.1| glucose-inhibited division protein B [Sagittula stellata E-37]
gi|126709482|gb|EBA08536.1| glucose-inhibited division protein B [Sagittula stellata E-37]
Length = 205
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 84/147 (57%), Gaps = 4/147 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDL 78
NVSR T KLE + L KW+ INLVS T++D RH DS ++ + +DL
Sbjct: 10 NVSRGTSLKLEQYLSLLKKWNTVINLVSPKTLDDAVKRHFLDSAQLVDLMPEDAGTLVDL 69
Query: 79 GSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ +I + V L+ES +KASFLR V+++T G V + RI +
Sbjct: 70 GSGGGFPGLVIAILSAETRPNLKVTLVESDQRKASFLRTVLRETEISGTVLSKRIMDVEP 129
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARALA L L +++ L
Sbjct: 130 L--QADILTARALAPLLELCQFADHHL 154
>gi|332978549|gb|EGK15257.1| glucose inhibited division protein B [Psychrobacter sp. 1501(2011)]
Length = 225
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+Y + + +L + +S E KL + L W+K NL + ++ I+H+ D
Sbjct: 13 QYQELDRLLLDSIEQLKLEISAEQRGKLMLYLDKLLFWNKAYNLTAIKQPKEALIKHIID 72
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + H +D+G+G G PG+I +I E V +++S KK F+R + +
Sbjct: 73 CLAI-LPHLKSGKLLDIGTGAGLPGVIIAICQPQRE---VTVLDSNQKKIRFIRQFISEL 128
Query: 122 AA-RGKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A RI+ P+ DV+++RA A L ++ + P L +
Sbjct: 129 KITNVTPVASRIENFVPEEHDKFDVVTSRAFASLTDFVDAAEPRLAK 175
>gi|113972262|ref|YP_736055.1| 16S rRNA methyltransferase GidB [Shewanella sp. MR-4]
gi|122943391|sp|Q0HD69|RSMG_SHESM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113886946|gb|ABI40998.1| methyltransferase GidB [Shewanella sp. MR-4]
Length = 206
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L N+ + E ++L F + KW+K NL S E +RH+ DS V H
Sbjct: 10 LAEINLPATAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDS-LVVSPHLQGE 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 69 RFIDVGTGPGLPGIPLAIMNPDK---TFVLLDSLGKRIRFQKQVAFELGIHNISSIESRV 125
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 126 EAYQPEQKFDGVLSRAFASIHDMLTWCHHL 155
>gi|169633362|ref|YP_001707098.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii SDF]
gi|238688142|sp|B0VMY0|RSMG_ACIBS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169152154|emb|CAP01056.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter baumannii]
Length = 210
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D
Sbjct: 16 GLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPAGRL-LD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGG PG+I ++ L++S KK FL+ + + + E
Sbjct: 75 VGTGGGMPGMIIALCQPE---RSCVLLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENQD 131
Query: 138 MI---TTCDVISARALADLDTLLEYSFPWLYQK 167
I DVI++RA A L + + P+L+++
Sbjct: 132 TIDELGQFDVITSRAFASLTDFVGAARPYLHEQ 164
>gi|29346555|ref|NP_810058.1| 16S rRNA methyltransferase GidB [Bacteroides thetaiotaomicron
VPI-5482]
gi|253568083|ref|ZP_04845494.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
1_1_6]
gi|38257555|sp|Q8A8M2|RSMG_BACTN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29338451|gb|AAO76252.1| glucose-inhibited division protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842156|gb|EES70236.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
1_1_6]
Length = 206
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 2 EIILKYFPDLTEEQRKQFAALYDLYIDWNAKINVISRKDIENLYEHHVLHSLGIAKVIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I + LV+ I K + A+ + +
Sbjct: 62 RPGTKVMDLGTGGGFPGIPLAILFPETKFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E Q+ D + +RA+ L L++ + K+
Sbjct: 120 ARAEEEKQL---FDFVVSRAVMPLADLIKIIKKNISPKQ 155
>gi|120608763|ref|YP_968441.1| 16S rRNA methyltransferase GidB [Acidovorax citrulli AAC00-1]
gi|189039370|sp|A1TI79|RSMG_ACIAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120587227|gb|ABM30667.1| 16S rRNA m(7)G-527 methyltransferase [Acidovorax citrulli AAC00-1]
Length = 243
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 21/159 (13%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
++S L +L F L KW++ NL + ++ H+ DSL +
Sbjct: 20 GLDLSEAHLGQLLEFLALLQKWNQVYNLTAVRDPQEMLTHHLLDSLAAVAPLQRHLRGMQ 79
Query: 77 ---------------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
D+GSGGG PG++ +I +++ V+ +++ KKA+F++
Sbjct: 80 DLPGSAGDGAKLRLLDVGSGGGLPGVVFAICCPALD---VSCVDTVAKKAAFIQQAAVSL 136
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R + DV+S RA A L + +S
Sbjct: 137 RLRN--LRGIHARVENLAGPFDVVSCRAFASLPDFVAWS 173
>gi|323705841|ref|ZP_08117413.1| methyltransferase GidB [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534837|gb|EGB24616.1| methyltransferase GidB [Thermoanaerobacterium xylanolyticum LX-11]
Length = 240
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPS 73
LN ++V E+ + L L+W++K+NL + + + I+H DSL ++
Sbjct: 20 LNMFHV-----EQFLKYSDLLLEWNEKMNLTAITEEREIIIKHFLDSLTALKCKVIKGSE 74
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRI 132
ID+G+G GFP + I S++ + +++S K+ FL +V + ++ R
Sbjct: 75 RIIDVGAGAGFPSVPLKILYPSLK---LTIVDSLKKRTVFLDELVSYLNLKDVEIIHGRA 131
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ + + D+ +RA+A L+ L+EY P+
Sbjct: 132 EDLGKDSGLREKYDISLSRAVAQLNVLVEYCIPFTK 167
>gi|226951093|ref|YP_002806184.1| methyltransferase GidB [Clostridium botulinum A2 str. Kyoto]
gi|254766887|sp|C1FP29|RSMG_CLOBJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226842347|gb|ACO85013.1| methyltransferase GidB [Clostridium botulinum A2 str. Kyoto]
Length = 239
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + + +L + L +W+KKINL + ++ +H D +++F+ P
Sbjct: 15 NLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSL 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+ G G G E + L++S K+ +FL V+ + + R ++
Sbjct: 75 IDIGTG-AGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYA 133
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D+ +RA+A+L L E+ P++ +
Sbjct: 134 QEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|332830472|gb|EGK03100.1| ribosomal RNA small subunit methyltransferase G [Dysgonomonas gadei
ATCC BAA-286]
Length = 206
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLH 69
+L + ++S E + Y L++ W+ KIN++S +E+ + HV SL +
Sbjct: 2 EIILKYFPDISEEQKSQFAALYDLYVDWNSKINVISRKDIENLYTHHVLHSLAIAKLIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPG+ +I + LV+ I K + A+ + + +
Sbjct: 62 TDGTQLMDVGTGGGFPGVPLAILFPKCKFLLVDSIGKKIRVATEVATAIG--LKNIQFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
CR +E D + +RA+ L L++ + +++
Sbjct: 120 CRAEEVK---EKFDFVVSRAVMPLPDLVKIIKKNISKEQ 155
>gi|226491241|ref|NP_001144818.1| hypothetical protein LOC100277897 [Zea mays]
gi|195647450|gb|ACG43193.1| hypothetical protein [Zea mays]
Length = 285
Score = 97.1 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
+S ++ + L+W++++NL + + + RHV DSL +
Sbjct: 53 LSPPQQRQITVYVDTLLEWNQRMNLTAXTDEAEVMARHVADSLAMLPPLERVYRGRSTSA 112
Query: 76 ---------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
ID+GSG G PG+I ++ S + L+ES + +FL + V+
Sbjct: 113 GGAIDGVRLIDVGSGAGLPGLILAVARPSWK---FTLLESMRXRCTFLEHAVEXMNLSNV 169
Query: 126 KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
V R ++ Q + D+++ARA+ +L L EY P +
Sbjct: 170 DVVCDRAEKVGQSXDFRESYDIVAARAVXELKVLAEYCIPLVR 212
>gi|292493914|ref|YP_003529353.1| methyltransferase GidB [Nitrosococcus halophilus Nc4]
gi|291582509|gb|ADE16966.1| methyltransferase GidB [Nitrosococcus halophilus Nc4]
Length = 211
Score = 97.1 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 4/159 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL L+ + + + + L + L KW+++ NL + + +H+ DSL +
Sbjct: 4 DILEKGLLILGFKLEQRQVGGLLAYVRLLEKWNQRYNLTAIRNPAEMISKHLFDSLSI-G 62
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+D+GSG G PGI +I E L++ KK FL +
Sbjct: 63 PSLGEGRILDVGSGAGLPGIPLAIAYPERE---FALLDKSAKKTRFLIQASIELGLSNVS 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
C EA DV+ RA A L + +
Sbjct: 120 VVCERVEAYHPPDLFDVVVTRAFAKLADFVVQAGHLCKP 158
>gi|269798906|ref|YP_003312806.1| methyltransferase GidB [Veillonella parvula DSM 2008]
gi|269095535|gb|ACZ25526.1| methyltransferase GidB [Veillonella parvula DSM 2008]
Length = 250
Score = 97.1 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLG 79
+ E + +Y ++ +K +NL + +++ I+H+ DSL + ID+G
Sbjct: 31 TEEQAKDFYLYYVHMIETNKYLNLTGITNMKEVVIKHMIDSLSCYDSEIIKSGMTIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--AP 136
+G GFPGI +I S++ V L +S K+ +FL V+ + R ++
Sbjct: 91 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLNFLESVIDELKLTNCTTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKE 177
>gi|167626209|ref|YP_001676503.1| 16S rRNA methyltransferase GidB [Shewanella halifaxensis HAW-EB4]
gi|189040824|sp|B0TQG4|RSMG_SHEHH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167356231|gb|ABZ78844.1| methyltransferase GidB [Shewanella halifaxensis HAW-EB4]
Length = 207
Score = 97.1 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + ++L F + KW+K NL S E IRH+ DS V H
Sbjct: 6 LNDYLAEVGLTATEQQKKQLVDFVGMLNKWNKAFNLTSVRDPEQMLIRHIMDS-LVVSPH 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I E L++S K+ F + V +
Sbjct: 65 LKGSRFIDVGTGPGLPGIPLAILNPDKE---FVLLDSLGKRIRFQKQVQFELGINNISSI 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 122 ESRVEAYQPEELFDGVLSRAFASIQDMLHWCHHL 155
>gi|330997039|ref|ZP_08320901.1| 16S rRNA methyltransferase GidB [Paraprevotella xylaniphila YIT
11841]
gi|329571537|gb|EGG53219.1| 16S rRNA methyltransferase GidB [Paraprevotella xylaniphila YIT
11841]
Length = 206
Score = 97.1 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +S + E+ + L+ W+ KIN++S +++ + HV + F
Sbjct: 2 ELILKYFPKLSEKQTEQFQQLDALYHDWNAKINVISRKDIDNLYEHHVLHSLGIAEFTRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I +L++S KK V ++ + F
Sbjct: 62 KSGTEIMDLGTGGGFPGIPLAIMFPD---CHFHLVDSIGKKIKVCMEVARELGLKNVTFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
E + D + +RA+ L L++
Sbjct: 119 HCRAEEEK--AKFDFVVSRAVMPLADLVKI 146
>gi|262370371|ref|ZP_06063697.1| methyltransferase GidB [Acinetobacter johnsonii SH046]
gi|262314713|gb|EEY95754.1| methyltransferase GidB [Acinetobacter johnsonii SH046]
Length = 210
Score = 97.1 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ ++S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 8 LKQGSQKLGLDLSEEALNLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + +D+G+GGG PG+I ++ + L++S KK FL+ + +
Sbjct: 68 PKGRL-LDIGTGGGMPGMIIALCQPERQ---CVLLDSNGKKIRFLKQFIADLKLTNVIAV 123
Query: 130 CRIQEAPQMI---TTCDVISARALADLDTLLEYSFPWLYQ 166
E I DVI++RA A L + S P+++Q
Sbjct: 124 QTRVENEDSIHDLGQFDVITSRAFASLTDFINASKPYMHQ 163
>gi|254186500|ref|ZP_04893017.1| methyltransferase GidB [Burkholderia pseudomallei Pasteur 52237]
gi|157934185|gb|EDO89855.1| methyltransferase GidB [Burkholderia pseudomallei Pasteur 52237]
Length = 232
Score = 97.1 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 32 LSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 92 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 148
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 149 PGADVSAKFDVIVSRAFADLADFVTLARHLVAP 181
>gi|149371606|ref|ZP_01891022.1| glucose-inhibited division protein B [unidentified eubacterium
SCB49]
gi|149355233|gb|EDM43793.1| glucose-inhibited division protein B [unidentified eubacterium
SCB49]
Length = 232
Score = 97.1 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQ 67
L NY ++S + L+ W+ KIN+VS +++ ++RHV +
Sbjct: 26 LIKNYFP---DLSDTQKNQFIKLEELYKDWNLKINVVSRKDIDEIYLRHVLHSLGIAKVM 82
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
S +D+G+GGGFPG+ +I + L++S KK + VV K
Sbjct: 83 SFLPGSTVMDVGTGGGFPGVPLAILFPETQFH---LVDSIGKKIKVVEEVVAGLGLTNVK 139
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V A + D I +RA+A ++T + + + +K
Sbjct: 140 VTND---RAENIDEQYDFIVSRAVAQMETFVRWVKNSVKKK 177
>gi|306820324|ref|ZP_07453963.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551653|gb|EFM39605.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 237
Score = 97.1 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 10 LRANYLLNTYNV-----SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++ + L N+ + + EK + + L +++K+NL + + +++ + +H DSL
Sbjct: 1 MKKSKFLEALNIWGLKYADDVYEKFDIYTQNLLSYNEKVNLTAITNIDEIYEKHYLDSLS 60
Query: 65 V--FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + S ID+G+G GFP I I I +++ + + FL ++ K +
Sbjct: 61 ILKYVHLEQNSSIIDVGTGAGFPSIPMKIFREDINLCMLDSLAK---RVVFLEDMISKLS 117
Query: 123 AR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ D +RA+A+L TL EY P++ +
Sbjct: 118 LKKSTALHARAEDLAQKKDYRENFDYAVSRAVANLSTLCEYCIPFVKK 165
>gi|24376229|ref|NP_720273.1| glucose-inhibited division protein B [Shewanella oneidensis MR-1]
gi|29336672|sp|Q8E8B0|RSMG_SHEON RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24351292|gb|AAN57716.1|AE015908_1 glucose-inhibited division protein B [Shewanella oneidensis MR-1]
Length = 206
Score = 96.7 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L N+ + E ++L F + KW+K NL S E +RH+ DS V H
Sbjct: 10 LAEINLPATAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEIMLVRHIMDS-LVVSKHLQGD 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 69 RFIDVGTGPGLPGIPLAIMNPDK---TFVLLDSLGKRIRFQKQVAFELGIHNVSSIESRV 125
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 126 EAYQPEQKFDGVLSRAFASIHDMLTWCHHL 155
>gi|218130857|ref|ZP_03459661.1| hypothetical protein BACEGG_02452 [Bacteroides eggerthii DSM 20697]
gi|317476051|ref|ZP_07935303.1| 16S rRNA methyltransferase GidB [Bacteroides eggerthii 1_2_48FAA]
gi|217987201|gb|EEC53532.1| hypothetical protein BACEGG_02452 [Bacteroides eggerthii DSM 20697]
gi|316907689|gb|EFV29391.1| 16S rRNA methyltransferase GidB [Bacteroides eggerthii 1_2_48FAA]
Length = 206
Score = 96.7 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ E ++ Y L+ W+ KIN++S +E+ + HV +
Sbjct: 2 ELILKYFPDLTEEQKKQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAQIIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ LV+ I K + A+ + +
Sbjct: 62 KPGTKIMDLGTGGGFPGIPLAILFPEVQFHLVDSIGKKVRVATEIANSIG--LKNVTTRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E Q+ D + +RA+ L LL+ + K+
Sbjct: 120 ARAEEEKQL---FDFVVSRAVMPLADLLKIIRKNISPKQ 155
>gi|167740807|ref|ZP_02413581.1| methyltransferase GidB [Burkholderia pseudomallei 14]
Length = 213
Score = 96.7 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + ++H+ DSL + H + +D
Sbjct: 13 LSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLVQHILDSLSIVPHLGAHGAAAAALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 73 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 129
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 130 PGADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|167564629|ref|ZP_02357545.1| methyltransferase GidB [Burkholderia oklahomensis EO147]
Length = 213
Score = 96.7 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWID 77
+S L + L KW+ NL + ++H+ DSL + + +D
Sbjct: 13 LSDAQHGALLDYVALLAKWNAVYNLTAIRDPRQMLVQHILDSLSIVPHLGARGAAATALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PGI+ +I L + V L + +KK++F + V R++
Sbjct: 73 VGSGGGLPGIVLAITLPEWQ---VTLNDIVHKKSAFQTQAKAELKLGNLSVVTGRVETLR 129
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 130 LGADVPGKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|238899344|ref|YP_002925027.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229467105|gb|ACQ68879.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 211
Score = 96.7 bits (239), Expect = 9e-19, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + N+S E +K+ + L +W+K N S ++ I+HV DS+ +
Sbjct: 1 MLDELNILLSIAKINLSEEQKQKIISYIELLCQWNKTYNFTSVHDPKEMLIKHVLDSI-I 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PG++ +I L L++S K+ FLR V Q
Sbjct: 60 VAPYLKGRKFIDVGTGPGLPGLLLAIVLPD---SHFTLLDSIGKRICFLRQVQQSLRLTN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E+ D + +RA A L +L + +
Sbjct: 117 IQPIQSRVESFFPSKRFDGVISRAFASLKNMLSCCEHLVDK 157
>gi|189039666|sp|A3NF53|RSMG_BURP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 232
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 32 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 92 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 148
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 149 SGADVPAKFDVIVSRAFADLADFVTLARHLVAP 181
>gi|76809860|ref|YP_331605.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1710b]
gi|124386113|ref|YP_001027578.1| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10229]
gi|254298692|ref|ZP_04966143.1| methyltransferase GidB [Burkholderia pseudomallei 406e]
gi|254357416|ref|ZP_04973690.1| methyltransferase GidB [Burkholderia mallei 2002721280]
gi|123600830|sp|Q3JXU8|RSMG_BURP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039670|sp|Q62FS7|RSMG_BURMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039671|sp|A1V8U2|RSMG_BURMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76579313|gb|ABA48788.1| methyltransferase GidB [Burkholderia pseudomallei 1710b]
gi|148026480|gb|EDK84565.1| methyltransferase GidB [Burkholderia mallei 2002721280]
gi|157808557|gb|EDO85727.1| methyltransferase GidB [Burkholderia pseudomallei 406e]
Length = 232
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 32 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 92 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 148
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 149 PGADVPAKFDVIVSRAFADLADFVTLARHLVAP 181
>gi|53721014|ref|YP_110000.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei K96243]
gi|251767389|ref|ZP_02267062.2| 16S rRNA methyltransferase GidB [Burkholderia mallei PRL-20]
gi|262193307|ref|YP_001082524.2| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10247]
gi|81607635|sp|Q63PG9|RSMG_BURPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|294862466|sp|A2S6K9|RSMG_BURM9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|294862495|sp|A3MQI8|RSMG_BURM7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52211428|emb|CAH37419.1| methyltransferase GidB [Burkholderia pseudomallei K96243]
gi|243062886|gb|EES45072.1| 16S rRNA methyltransferase GidB [Burkholderia mallei PRL-20]
gi|261826012|gb|ABN03402.2| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10229]
gi|261835042|gb|ABO04723.2| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10247]
Length = 230
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 30 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 89
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 90 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 146
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 147 PGADVPAKFDVIVSRAFADLADFVTLARHLVAP 179
>gi|126442288|ref|YP_001060974.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 668]
gi|126221781|gb|ABN85287.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 668]
Length = 213
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 13 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 73 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 129
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 130 SGADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|53724004|ref|YP_104450.1| 16S rRNA methyltransferase GidB [Burkholderia mallei ATCC 23344]
gi|67643080|ref|ZP_00441829.1| 16S rRNA methyltransferase GidB [Burkholderia mallei GB8 horse 4]
gi|121598363|ref|YP_994645.1| 16S rRNA methyltransferase GidB [Burkholderia mallei SAVP1]
gi|167721835|ref|ZP_02405071.1| methyltransferase GidB [Burkholderia pseudomallei DM98]
gi|167818022|ref|ZP_02449702.1| methyltransferase GidB [Burkholderia pseudomallei 91]
gi|167826385|ref|ZP_02457856.1| methyltransferase GidB [Burkholderia pseudomallei 9]
gi|167847904|ref|ZP_02473412.1| methyltransferase GidB [Burkholderia pseudomallei B7210]
gi|167896461|ref|ZP_02483863.1| methyltransferase GidB [Burkholderia pseudomallei 7894]
gi|167921078|ref|ZP_02508169.1| methyltransferase GidB [Burkholderia pseudomallei BCC215]
gi|217424010|ref|ZP_03455510.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 576]
gi|226193255|ref|ZP_03788865.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei Pakistan
9]
gi|237814357|ref|YP_002898808.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei MSHR346]
gi|254174686|ref|ZP_04881347.1| methyltransferase GidB [Burkholderia mallei ATCC 10399]
gi|254201526|ref|ZP_04907890.1| methyltransferase GidB [Burkholderia mallei FMH]
gi|254206864|ref|ZP_04913215.1| methyltransferase GidB [Burkholderia mallei JHU]
gi|254258661|ref|ZP_04949715.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1710a]
gi|52427427|gb|AAU48020.1| methyltransferase GidB [Burkholderia mallei ATCC 23344]
gi|121227173|gb|ABM49691.1| methyltransferase GidB [Burkholderia mallei SAVP1]
gi|147747420|gb|EDK54496.1| methyltransferase GidB [Burkholderia mallei FMH]
gi|147752406|gb|EDK59472.1| methyltransferase GidB [Burkholderia mallei JHU]
gi|160695731|gb|EDP85701.1| methyltransferase GidB [Burkholderia mallei ATCC 10399]
gi|217393073|gb|EEC33095.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 576]
gi|225934855|gb|EEH30832.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei Pakistan
9]
gi|237506501|gb|ACQ98819.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei MSHR346]
gi|238524329|gb|EEP87762.1| 16S rRNA methyltransferase GidB [Burkholderia mallei GB8 horse 4]
gi|254217350|gb|EET06734.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1710a]
Length = 213
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 13 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 73 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 129
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 130 PGADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|299782734|gb|ADJ40732.1| Glucose inhibited division protein B [Lactobacillus fermentum CECT
5716]
Length = 245
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 13/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L + ++ + + +Y L ++ ++ +NL + + + +++H DSL
Sbjct: 1 MNPEEFLQALLDHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+P D+G+G GFP + I +E V +++S NK+ +FL +
Sbjct: 61 GAFAYPKLQSQALTLCDIGAGAGFPSLPLKIAFPQLE---VTIVDSLNKRINFLADLCDD 117
Query: 121 TAARGKV-FACRIQEAP----QMITTCDVISARALADLDTLLEYSFP 162
G R + D+++ARA+A L L E P
Sbjct: 118 LGLTGVXLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLP 164
>gi|119896434|ref|YP_931647.1| 16S rRNA methyltransferase GidB [Azoarcus sp. BH72]
gi|189039480|sp|A1K1Q5|RSMG_AZOSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119668847|emb|CAL92760.1| probable methyltransferase GidB [Azoarcus sp. BH72]
Length = 212
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ T +L F L LKW+K NL + ++ H+ DSL V + D
Sbjct: 19 GLDIPTATQARLIAFGELLLKWNKVYNLTAIRAPQEVITHHLLDSLAVLPYLSAVTRLAD 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PGI +I + V +E+ NKKASF + + + R++
Sbjct: 79 IGSGGGLPGIPLAIVRPEL---SVISVETVNKKASFQQQAKIELGLGNFQPLNARVENLK 135
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
CD + +RA + L +E S +
Sbjct: 136 P-EQPCDGVISRAFSSLKDFVELSGHLV 162
>gi|255320528|ref|ZP_05361709.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens SK82]
gi|262378420|ref|ZP_06071577.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens
SH164]
gi|255302500|gb|EET81736.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens SK82]
gi|262299705|gb|EEY87617.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens
SH164]
Length = 210
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ +++ ETL L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 8 LKQGSQALGLSLNDETLGLLLQYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + +D+G+GGG PG+I ++ E L++S KK FL+ + + +
Sbjct: 68 PSGRL-LDIGTGGGMPGMIIALCQPERE---CVLLDSNGKKIRFLKQFIADLKLKNVIAV 123
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
E + + DVI++RA A L + S P+++
Sbjct: 124 QTRVENEESIHELGQFDVITSRAFASLTDFVLASEPYMH 162
>gi|301061351|ref|ZP_07202132.1| 16S rRNA methyltransferase GidB [delta proteobacterium NaphS2]
gi|300444546|gb|EFK08530.1| 16S rRNA methyltransferase GidB [delta proteobacterium NaphS2]
Length = 229
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S E L F W++++NL S+ + V DSL P+ + +D+GS
Sbjct: 21 LSSEQKNLLLVFIKELNAWNRRMNLTGLSSKKRILDELVADSLMPHPFLPHTGVCLDVGS 80
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFP + I +++ L+E +KK SFL++++++ + + P
Sbjct: 81 GGGFPAVPLKICRPNLKFF---LLEPNSKKGSFLKHIIRRCGLKEIAVVRERIDTPSGSL 137
Query: 141 TC---DVISARALADLDTLLEYSFPWL 164
D+I++RA+A L L+ + P+L
Sbjct: 138 PFKAVDIITSRAMAPLPKLINWCTPYL 164
>gi|30250396|ref|NP_842466.1| glucose inhibited division protein [Nitrosomonas europaea ATCC
19718]
gi|38257430|sp|Q82S79|RSMG_NITEU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|30181191|emb|CAD86387.1| Glucose inhibited division protein [Nitrosomonas europaea ATCC
19718]
Length = 214
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 21 VSRET---LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S +T +L + L KW+ NL S E RH+ DS V H +D
Sbjct: 17 LSADTGHLCSRLLRYIELIAKWNSTHNLTSVRNPESMITRHMLDS-LVILPHVSGPGIVD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG GFPGI ++ + V L+ES KKA+FL V + E +
Sbjct: 76 VGSGAGFPGIPVALARPEWQ---VTLVESNQKKAAFLLQAVLELGLPNISVKQGRVEKIK 132
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
+ D + +RA + L+ + S
Sbjct: 133 LENKVDTVVSRAFSSLERFMSLSKHL 158
>gi|222056911|ref|YP_002539273.1| methyltransferase GidB [Geobacter sp. FRC-32]
gi|221566200|gb|ACM22172.1| methyltransferase GidB [Geobacter sp. FRC-32]
Length = 210
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +EKL + KW++KINL + + ED I+H DSL + + ++ +D
Sbjct: 10 GLQLSFDQVEKLALYAKELKKWNRKINLTAIKSDEDIVIKHFVDSLVLAKFVKADAMLVD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG GFP I I + ++ V+ +E K + ++ + R ++ Q
Sbjct: 70 IGSGAGFPCIPLKIIMPALRVTSVDAVEKKIIFQRNVARLIGLAGF--EAVHGRAEQL-Q 126
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA +D+ T + + +
Sbjct: 127 PDNKADAVVSRAFSDILTFAGMAKGLMKPE 156
>gi|88797177|ref|ZP_01112767.1| methyltransferase GidB [Reinekea sp. MED297]
gi|88780046|gb|EAR11231.1| methyltransferase GidB [Reinekea sp. MED297]
Length = 216
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + ++ L++L ++ L +KW+K NL S D RH+ DSL +
Sbjct: 9 LHSGAVKLGVELTDAQLDRLLAYHALLVKWNKAYNLTSVRDAGDMVDRHLVDSLSI-LPA 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G G PG+I ++ + V L++S KK FL V
Sbjct: 68 LTAEPLLDVGTGPGLPGMIIALLKPDVP---VFLLDSNGKKTRFLNQVKMSLNVENVTVV 124
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E+ Q + I++RA A L ++ +S L
Sbjct: 125 HHRLESWQPERQFEQITSRAFATLSDMVSFSRHLLAD 161
>gi|167904863|ref|ZP_02492068.1| methyltransferase GidB [Burkholderia pseudomallei NCTC 13177]
Length = 213
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 13 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 73 VGSGGGLPGVVLAIALPGWR---VTLNDVVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 129
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 130 PGADVSAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|167913141|ref|ZP_02500232.1| methyltransferase GidB [Burkholderia pseudomallei 112]
Length = 213
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S L + L KW+ NL + I+H+ DSL + H + +D
Sbjct: 13 LSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I L V L + +KK++F + V R++
Sbjct: 73 VGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR 129
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 130 PGADVSAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|296137581|ref|YP_003644823.1| methyltransferase GidB [Thiomonas intermedia K12]
gi|295797703|gb|ADG32493.1| methyltransferase GidB [Thiomonas intermedia K12]
Length = 224
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIW 75
+ + ++L + L +W++ NL + +E H+ D L P
Sbjct: 26 QLDFTERQRQQLLDYTALLQRWNRVFNLTAVRDLEGIARLHLADCLAALPALQRLAPQRL 85
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSGGG PGI+ +I L E V+LI++ KK +FL+ R EA
Sbjct: 86 LDVGSGGGLPGIVFAIGLPEAE---VHLIDAVQKKCAFLQQTSGSLQLRQVSVHHARVEA 142
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D +++RA +DL L++ + L
Sbjct: 143 LADARGFDCMTSRAFSDLPLLIQSTRHLLAD 173
>gi|197120415|ref|YP_002140842.1| 16S rRNA (7-methyl-G527)-methyltransferase [Geobacter bemidjiensis
Bem]
gi|197089775|gb|ACH41046.1| 16S rRNA (7-methyl-G527)-methyltransferase [Geobacter bemidjiensis
Bem]
Length = 217
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ + LE L F KW++KINL + + ED ++H+ DSL + +
Sbjct: 7 DLLKKGAAELGVQLDSAQLESLNLFAEELKKWNRKINLTAITGDEDIALKHLVDSLSLLK 66
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
P +D+GSGGGFP I I +E V+ + K SF + V+ G
Sbjct: 67 AVRCPGRLLDIGSGGGFPCIPVKIVQPDLEMVSVDAVVK---KISFQKQAVRLLNLTGFT 123
Query: 127 VFACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWLYQK 167
R + Q + D + +RA +D+ + + + P L +
Sbjct: 124 ALHVRAETLAQEYGASFDWVVSRAFSDIPSFVAMALPVLKPE 165
>gi|83594955|ref|YP_428707.1| glucose inhibited division protein [Rhodospirillum rubrum ATCC
11170]
gi|123525452|sp|Q2RN75|RSMG_RHORT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83577869|gb|ABC24420.1| Glucose inhibited division protein [Rhodospirillum rubrum ATCC
11170]
Length = 201
Score = 96.3 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 7/156 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ VSRET+E+LE + + KW ++INLV +T++D W RH DS ++ L
Sbjct: 1 MTPEAFAADVPVSRETVERLEAYLAVLEKWQRRINLVGKTTLDDPWRRHFLDSAQLLALL 60
Query: 70 PYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P P+ +DLGSG GFPG++ +I + V+L+E+ +K++FL + T R +
Sbjct: 61 PTPTRVLLDLGSGAGFPGLVLAI----LGVPEVHLVEADGRKSAFLIEAARITNTRIVLH 116
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R++ P DV++ARA A L +LE + P+L
Sbjct: 117 TLRLEALPVF--PVDVVTARAFAPLARILEGAAPFL 150
>gi|85057734|ref|YP_456650.1| glucose inhibited division protein B [Aster yellows witches'-broom
phytoplasma AYWB]
gi|123518152|sp|Q2NJ22|RSMG_AYWBP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84789839|gb|ABC65571.1| glucose inhibited division protein B [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 212
Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
+L L + + ++++ L K ++Y K ++K+NL S ++ D +H D L+
Sbjct: 1 MLYFESLKDKFKLNKKQLNKFVFYYEFLKKENQKMNLTSLISLSDVCYKHFYDSLILKEI 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ D+GSG GFP I ++ + +IES KK +FL+ +
Sbjct: 61 FDFNNVTNLCDVGSGAGFPSFPLKILYPHLK---IIIIESSLKKINFLKQLASHLELDNV 117
Query: 127 VFACRIQEAPQM--ITTCDVISARALADLDTLLEYSFPWLYQK 167
F + E + + D + ARALA L+ +L++ P + ++
Sbjct: 118 CFFHKRVEQHDIAKNGSYDFVVARALARLEIILKWCVPLVKKR 160
>gi|313202485|ref|YP_004041143.1| methyltransferase gidb [Methylovorus sp. MP688]
gi|312441801|gb|ADQ85907.1| methyltransferase GidB [Methylovorus sp. MP688]
Length = 194
Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLGSGGGFPGII 88
+ L KW+K NL + ++ H+ DSL PS +D+GSG G PGII
Sbjct: 3 DYLALLQKWNKVHNLTAVRDPDEMVTLHLLDSLSVLPHVQALSPSRLLDVGSGAGLPGII 62
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
++ + ++ V I++ KKASF+R + E + D++ +R
Sbjct: 63 LALCMPDLK---VTTIDAVQKKASFMRQAKAELGIANLEVIAGRVEQHRPSQAYDIVISR 119
Query: 149 ALADLDTLLEYSFPWLYQ 166
A +++ ++ + + +
Sbjct: 120 AFSEIALFIKLTRHLIAE 137
>gi|167762775|ref|ZP_02434902.1| hypothetical protein BACSTE_01133 [Bacteroides stercoris ATCC
43183]
gi|167699115|gb|EDS15694.1| hypothetical protein BACSTE_01133 [Bacteroides stercoris ATCC
43183]
Length = 206
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ E + Y L+ W+ KIN++S +E+ + HV +
Sbjct: 2 ELILKYFPDLTEEQKRQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ LV+ I K + A+ + +
Sbjct: 62 KPGTKVMDLGTGGGFPGIPLAILFPEVQFHLVDSIGKKVRVATEIAGSIG--LKNVTTRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E Q+ D + +RA+ L LL+ + K+
Sbjct: 120 ARAEEEKQL---FDFVVSRAVMPLTDLLKIIRKNISPKQ 155
>gi|158335573|ref|YP_001516745.1| methyltransferase GidB [Acaryochloris marina MBIC11017]
gi|189039368|sp|B0C384|RSMG_ACAM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158305814|gb|ABW27431.1| methyltransferase GidB [Acaryochloris marina MBIC11017]
Length = 256
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 24/165 (14%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-----------------LR 64
+ E ++ E + L ++ ++++NL + DFW +H+ DS +
Sbjct: 22 TPEQEQQFERLFQLIVQANQQLNLTRITDPPDFWEKHLWDSLVGIAPWLQPDSSIQRQVS 81
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
H +P ID+G+GGGFPG+ +I + + L++S KK +FL+ V +
Sbjct: 82 FSVDHSHPLKVIDIGTGGGFPGLPIAIIKPTWR---ITLLDSTQKKLAFLQQVNAELGLE 138
Query: 125 GKVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
C E + D+ RA+ EY+ P L
Sbjct: 139 NVETCCDRAENLGQQSPYRESFDLAVIRAVGPASVCAEYALPLLA 183
>gi|39938753|ref|NP_950519.1| 16S rRNA methyltransferase GidB [Onion yellows phytoplasma OY-M]
gi|55976448|sp|Q6YQV6|RSMG_ONYPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|39721862|dbj|BAD04352.1| S-adenosylmethionine-dependent [Onion yellows phytoplasma OY-M]
Length = 212
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
+L L + + ++ + L K ++Y + ++K+NL S ++ D +H D L+
Sbjct: 1 MLYFESLKDKFALNEKQLNKFVFYYEFLKQENQKMNLTSIISLSDVCYKHFYDSLILKEI 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ D+ SG GFP I ++ + +IES KK +FL+ +
Sbjct: 61 FNFNTVTNLCDVDSGAGFPSFPLKILFPHLK---IVIIESSLKKINFLKQLSSHLELDNI 117
Query: 127 VFACRIQEAPQM--ITTCDVISARALADLDTLLEYSFPWLYQK 167
F + E + + D + ARALA L+ +L++ P + +K
Sbjct: 118 CFFHQRVEQYDIAKNGSYDCVVARALARLELILKWCVPLVKKK 160
>gi|39933370|ref|NP_945646.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris CGA009]
gi|55976427|sp|Q6ND16|RSMG_RHOPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|39652995|emb|CAE25737.1| putative glucose inhibited division protein B (GidB)
[Rhodopseudomonas palustris CGA009]
Length = 223
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
L + +L+ + L +W K NLV+ ST+ W RHV DSL++ L P
Sbjct: 17 DKAAALKLIPIPSALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLMP 76
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ W+D GSGGGFPG++ + ++ + G V L+E KKA+FLR ++ A G V
Sbjct: 77 HARRWLDFGSGGGFPGVVLACAMADVGG-HVTLVERIAKKAAFLREALRVAGAPGTVILA 135
Query: 131 RIQEAPQMITTC-DVISARALADLDTLLEYSFPWLYQ 166
I + D I+ARA+A L L+ ++ P +
Sbjct: 136 DIGDNVDRFPQALDCITARAVAPLHQLIGFAEPLMTP 172
>gi|171060864|ref|YP_001793213.1| 16S rRNA methyltransferase GidB [Leptothrix cholodnii SP-6]
gi|238689093|sp|B1XYL2|RSMG_LEPCP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170778309|gb|ACB36448.1| methyltransferase GidB [Leptothrix cholodnii SP-6]
Length = 218
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIW 75
+S + L + L +W++ NL + + ++H+ DSL V P
Sbjct: 19 LSDTQADALLAYLGLLQRWNQVYNLTAIRDPKQMLVQHLLDSLAVIAPLNRVAGSAPLRL 78
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSGGG PG++ ++ + + +++ KKA+F+R V + V E
Sbjct: 79 LDVGSGGGLPGVVIAVLRPDCQ---ITCVDTVAKKATFIRQVTAELRLPQLVARHARVEQ 135
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
VI+ARA A L L++ + P L
Sbjct: 136 L-TDGPYSVITARAFASLADLVKLTRPLLAP 165
>gi|241762352|ref|ZP_04760432.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260753424|ref|YP_003226317.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|241373146|gb|EER62785.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552787|gb|ACV75733.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 221
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------- 64
+L +SRET+EKL+ F NL++ STV+D W RH+ DS +
Sbjct: 9 WLDQHIGISRETVEKLDAFVACLHAEMAHQNLIARSTVDDLWGRHIIDSAQLLPLARKEA 68
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
F P W+DLGSG GFPGII +I + V L+ES+ K+ FL +
Sbjct: 69 AFNKKASPKSWLDLGSGAGFPGIIIAI----LSEMAVTLVESRRKRVEFLEKAAEAAGTP 124
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++ D+I+ARA A LD L +FP+ +++
Sbjct: 125 VTILGQRLENIEPQ--AFDIITARAFAPLDKLWRLAFPFSHKE 165
>gi|220933186|ref|YP_002510094.1| methyltransferase GidB [Halothermothrix orenii H 168]
gi|219994496|gb|ACL71099.1| methyltransferase GidB [Halothermothrix orenii H 168]
Length = 240
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGF 84
+++L+ + + +KK NL + ++ +H DSL + + +ID+G+G GF
Sbjct: 26 IDQLQDYLKFLKEENKKYNLTALDEPDEIITKHFFDSLSFLSKFNLKQEKFIDIGTGAGF 85
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQ---MIT 140
PG++ I ++ L++S K+ +FL+ + + + +V R ++ +
Sbjct: 86 PGMVIKIFKPGLDM---ILLDSLAKRVNFLKKLSTRLGLKKLEVVHARAEDLARDKIYRE 142
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D + ARA+A ++TL EY+ P +
Sbjct: 143 GFDWVVARAVAPVNTLSEYTLPLVR 167
>gi|114565205|ref|YP_752719.1| glucose-inhibited division protein B [Shewanella frigidimarina
NCIMB 400]
gi|114336498|gb|ABI73880.1| methyltransferase GidB [Shewanella frigidimarina NCIMB 400]
Length = 213
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 4/158 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ + + ++L F + KW+K NL + E IRHV DSL V
Sbjct: 13 LKTYLAEMNMSATELQQKQLIGFVEMLDKWNKAYNLTAVRDPEQMLIRHVMDSLTVSPY- 71
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I + L++S K+ F + V +
Sbjct: 72 LEGQRFIDVGTGPGLPGIPLAIMNPDKQ---FVLLDSLGKRIRFQKQVQFELKINNITSV 128
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA D + +RA A + +L + +K
Sbjct: 129 ESRVEAYIPEIKFDGVLSRAFASIQDMLSWCHHLPTEK 166
>gi|144899660|emb|CAM76524.1| Methyltransferase [Magnetospirillum gryphiswaldense MSR-1]
Length = 222
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 7/152 (4%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYP 72
+L +S + + +L + L +KW K+INLV T+ W RH DS ++F L
Sbjct: 26 EVLAPLTLSADAVTRLGLYAELLVKWQKRINLVGPDTIPSLWSRHFLDSAQLFPLLPQNI 85
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+GSG GFPG++ +I + V+L+ES +K +FLR V + T + RI
Sbjct: 86 HRVMDMGSGAGFPGLVLAI----LGAPDVHLVESDARKCAFLREVARITETAVTIHNARI 141
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
++ P + D+I+ARALA L+ LL ++ L
Sbjct: 142 EKVPPL--GADLITARALAPLEKLLTWAEQHL 171
>gi|126176557|ref|YP_001052706.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS155]
gi|153002871|ref|YP_001368552.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS185]
gi|160877618|ref|YP_001556934.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS195]
gi|217975458|ref|YP_002360209.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS223]
gi|304412697|ref|ZP_07394300.1| methyltransferase GidB [Shewanella baltica OS183]
gi|307305838|ref|ZP_07585584.1| methyltransferase GidB [Shewanella baltica BA175]
gi|166224611|sp|A3DAS4|RSMG_SHEB5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224612|sp|A6WUK0|RSMG_SHEB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040823|sp|A9KX16|RSMG_SHEB9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766901|sp|B8EDW0|RSMG_SHEB2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125999762|gb|ABN63837.1| methyltransferase GidB [Shewanella baltica OS155]
gi|151367489|gb|ABS10489.1| methyltransferase GidB [Shewanella baltica OS185]
gi|160863140|gb|ABX51674.1| methyltransferase GidB [Shewanella baltica OS195]
gi|217500593|gb|ACK48786.1| methyltransferase GidB [Shewanella baltica OS223]
gi|304348907|gb|EFM13322.1| methyltransferase GidB [Shewanella baltica OS183]
gi|306911331|gb|EFN41757.1| methyltransferase GidB [Shewanella baltica BA175]
gi|315269816|gb|ADT96669.1| methyltransferase GidB [Shewanella baltica OS678]
Length = 206
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L N+ + E ++L F + KW+K NL S E IRH+ DS V H
Sbjct: 10 LAEINLPATAEQKKQLIDFVGMLNKWNKAYNLTSVRDPEAMLIRHIMDS-LVVSKHLQGE 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ID+G+G G PGI +I + L++S K+ F + V +
Sbjct: 69 RFIDVGTGPGLPGIPLAIMNPDKQ---FVLLDSLGKRIRFQKQVSFELGIHNISSVESRV 125
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 126 EAYQPEQKFDGVLSRAFASIQDMLTWCHHL 155
>gi|269837891|ref|YP_003320119.1| methyltransferase GidB [Sphaerobacter thermophilus DSM 20745]
gi|269787154|gb|ACZ39297.1| methyltransferase GidB [Sphaerobacter thermophilus DSM 20745]
Length = 243
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--------HPYPSIWID 77
L++ + L L W+++INL + + IR DSL + P D
Sbjct: 23 LDRFARYRDLLLDWNRRINLTRVTEPTEVEIRLFADSLLLIPYLRRFREANPDNPPRLAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-- 135
+G+GGGFPG+ I + ++ L+ K + AR R +E
Sbjct: 83 VGAGGGFPGLPLKIAMPDLDLTLIEATGKKVAFLDAAIAALDLAGARA--VHGRAEELAH 140
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P DV++ARA+A + TLLEY P L
Sbjct: 141 LPDYRGRFDVVTARAVARMPTLLEYCLPLLRP 172
>gi|114326674|ref|YP_743831.1| methyltransferase gidB [Granulibacter bethesdensis CGDNIH1]
gi|122328341|sp|Q0BW94|RSMG_GRABC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114314848|gb|ABI60908.1| methyltransferase gidB [Granulibacter bethesdensis CGDNIH1]
Length = 213
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 7/167 (4%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV- 59
+K N + L VSRET EKL + L +W++ +NLVS + VE RH+
Sbjct: 4 VKQPLINCQIIRTLLPAGSGVSRETGEKLALYESLLTRWTRTVNLVSRNDVEHIRDRHIL 63
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ + L P P ID+GSGGG PG++ +I G +L+E+ +KA+FLR +
Sbjct: 64 DSLQLLPLLEPLPGPLIDIGSGGGLPGLVLAIA----TGRETHLVEADQRKAAFLREAAR 119
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
T + V ACRI++ I V++ARALA L+ LL Y+ L +
Sbjct: 120 ATESNVTVHACRIEQCN--IAPAPVLTARALAPLNVLLGYALRLLSK 164
>gi|147679250|ref|YP_001213465.1| S-adenosylmethionine-dependent methyltransferase [Pelotomaculum
thermopropionicum SI]
gi|189039870|sp|A5CY44|RSMG_PELTS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146275347|dbj|BAF61096.1| predicted S-adenosylmethionine-dependent methyltransferase
[Pelotomaculum thermopropionicum SI]
Length = 239
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
++ + + + E +Y L ++ +K +NL + + + ++H DSL + P +D+
Sbjct: 19 ITEKQVRQFEEYYSLIIERNKSLNLTAITGEREVAVKHFLDSLTCLKAVPLEDGTSLMDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA-- 135
G+G GFPGI I S+ V L+ES KKA FLR + + + R ++
Sbjct: 79 GTGAGFPGIPLKICRPSVR---VKLVESAEKKAVFLREAIGRLGLEMAEAIWARAEDVGK 135
Query: 136 -PQMITTCDVISARALADLDTLLEYSFP 162
P + ARA+A+L L EY P
Sbjct: 136 DPDHREKYGCVVARAVAELAVLAEYCLP 163
>gi|255261433|ref|ZP_05340775.1| 16S rRNA methyltransferase GidB [Thalassiobium sp. R2A62]
gi|255103768|gb|EET46442.1| 16S rRNA methyltransferase GidB [Thalassiobium sp. R2A62]
Length = 203
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DL 78
NVSRET+++L+ + L LKW+ IN+V+ ST+ D W+RH+EDS ++ P I DL
Sbjct: 7 NVSRETIDRLKAYESLILKWNPVINVVAKSTLTDIWVRHIEDSAQIVDFAPDGIIHWVDL 66
Query: 79 GSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
GSGGG PG++ ++ L+ ++ LIES +KA+FLR + V + RI+
Sbjct: 67 GSGGGLPGVVAALILAERSPDAVITLIESDKRKAAFLRTAALELGCSSISVVSDRIESVK 126
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++SARALA LD LL ++ L
Sbjct: 127 PQRAS--ILSARALAKLDVLLSFAEKHLA 153
>gi|167629163|ref|YP_001679662.1| methyltransferase gidb [Heliobacterium modesticaldum Ice1]
gi|167591903|gb|ABZ83651.1| methyltransferase gidb [Heliobacterium modesticaldum Ice1]
Length = 257
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L V + ++ + + + +NL + + + +H DSL L+
Sbjct: 25 LDKGLQAWGIAVLPDFIDHCTTYAEALVATNAHLNLTAITDPDGVAEKHFVDSLSPLLLN 84
Query: 70 PY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
P ID+G+G GFPG+ ++ V L++S NK+ FL ++ +
Sbjct: 85 LPNGPVTAIDVGTGAGFPGLPLALIRPQWR---VTLLDSLNKRCRFLSETTERLGLTNVQ 141
Query: 127 VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
+ R +++ + + ++ +RA+A L LLE P++
Sbjct: 142 ILHGRAEDSARNPLLRDKYSIVVSRAVARLPVLLELCLPFV 182
>gi|332885399|gb|EGK05648.1| ribosomal RNA small subunit methyltransferase G [Dysgonomonas
mossii DSM 22836]
Length = 206
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + N++ + ++ Y L+ W+ KIN++S +E+ + HV +
Sbjct: 2 DIILKYFPNITEKQKQQFAALYDLYADWNSKINVISRKDIENLYTHHVLHSLGIAKLIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +D+G+GGGFPG+ +I LV+ I K + A+ + + +
Sbjct: 62 KDGSKIMDVGTGGGFPGVPLAILFPKCNFLLVDSIGKKVRVATEVSSAIG--LENIQFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
CR +E D + +RA+ L L++ + +++
Sbjct: 120 CRAEEVK---EQFDFVVSRAVMPLPDLVKIIRKNVSKEQ 155
>gi|260662612|ref|ZP_05863507.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum 28-3-CHN]
gi|260553303|gb|EEX26246.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum 28-3-CHN]
Length = 245
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 6 SN-SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N R L + ++ + + +Y L ++ ++ +NL + + + +++H DSL
Sbjct: 1 MNPEEFRQALLDHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLT 60
Query: 65 VFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+P D+G+G GFP + I S +E V +++S NK+ +FL +
Sbjct: 61 GAFAYPKLQSQALTLCDIGAGAGFPSLPLKIAFSQLE---VTIVDSLNKRINFLADLCDD 117
Query: 121 TAAR-GKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFP 162
+ R + D+++ARA+A L L E P
Sbjct: 118 LGLTGVHLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLP 164
>gi|33151284|ref|NP_872637.1| glucose-inhibited division protein B [Haemophilus ducreyi 35000HP]
gi|55976490|sp|Q7VPP8|RSMG_HAEDU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33147504|gb|AAP95026.1| glucose inhibited division protein B [Haemophilus ducreyi 35000HP]
Length = 203
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + ++ E+L F L KW+K NL S E+ ++H+ DS V
Sbjct: 1 MKQKLDRLLVQADIQLTERQKEQLIGFVHLLHKWNKAYNLTSVRDPEEMLVKHIMDS-LV 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+H +ID+G+G G PGI +I + L++S K+ +F++ V+++ A
Sbjct: 60 VSVHLQGQSFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKQVLRELAITN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E D + +RA A LD +L + +
Sbjct: 117 VTPVLSRVEQYTAR-QFDGVLSRAFASLDDMLNWCYAL 153
>gi|297539953|ref|YP_003675722.1| methyltransferase GidB [Methylotenera sp. 301]
gi|297259300|gb|ADI31145.1| methyltransferase GidB [Methylotenera sp. 301]
Length = 217
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 5/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L++ L + E KL + L KW+K NL + + H+ DSL V
Sbjct: 11 LQSGLLEMDLQIDAEKQAKLIAYLLLIDKWNKVHNLTAIRDPLEMVTLHLLDSLSVLPHV 70
Query: 70 PYPSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ D+G+G G P I +I L ++ V I+S KK SF+R V +
Sbjct: 71 QALTPKCLLDVGAGAGLPSIPLAICLPELQ---VTAIDSVAKKTSFMRQVKGELGLSNFQ 127
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
EA + DVI +RA +++ ++ + L
Sbjct: 128 VEVGRVEALKKDVKFDVIISRAFSEIGLFVKLTKHLLA 165
>gi|189466163|ref|ZP_03014948.1| hypothetical protein BACINT_02533 [Bacteroides intestinalis DSM
17393]
gi|189434427|gb|EDV03412.1| hypothetical protein BACINT_02533 [Bacteroides intestinalis DSM
17393]
Length = 206
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ ++ Y L+ W+ KIN++S +E+ + HV +
Sbjct: 2 EIILKYFPDLTETQKQQFASLYDLYTDWNAKINVISRKDIENLYEHHVLHSLGIAKVTRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ LV+ I K + A+ + +
Sbjct: 62 VPGTHIMDLGTGGGFPGIPLAILFPEVKFHLVDSIGKKVRVATEVANSIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E Q+ D + +RA+ L LL+ + K+
Sbjct: 120 ARAEEEKQL---FDFVVSRAVMPLADLLKIIRKNITPKQ 155
>gi|88860626|ref|ZP_01135263.1| glucose-inhibited division protein B [Pseudoalteromonas tunicata
D2]
gi|88817221|gb|EAR27039.1| glucose-inhibited division protein B [Pseudoalteromonas tunicata
D2]
Length = 206
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L + +++ ++L + L KW+K NL S + ++H+ DS V
Sbjct: 4 EKLNQLLAQTSIELTQLQKQQLVKYVELLNKWNKAYNLTSVRDPNEMMVKHILDS-LVVA 62
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
H +ID+G+G G PG++ +I L + L++S K+ FL V +
Sbjct: 63 PHLPGKHYIDVGTGPGLPGVVLAIALPDTQ---FILLDSLGKRVRFLTQVKHELGLSNIS 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
E Q D + +RA A L ++++ +
Sbjct: 120 PVQSRVEDFQPPVKLDGVLSRAFASLQDMVDWCSHLI 156
>gi|149925398|ref|ZP_01913662.1| glucose-inhibited division protein B [Limnobacter sp. MED105]
gi|149825515|gb|EDM84723.1| glucose-inhibited division protein B [Limnobacter sp. MED105]
Length = 225
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 11/167 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+L ++ E +L + L KW++ NL + + H+ DSL V
Sbjct: 18 QDLLEKGIANLRLGLNSEQHAQLFKYGQLIQKWNRVYNLTAIRNNRELITHHLLDSLAVL 77
Query: 67 QLHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ +D+G+G G PG++ +I + + + LI++ KKA+F++ +
Sbjct: 78 PEIAFALQATSSPRILDVGAGAGLPGLVLAIAQPNWQ---ITLIDTVQKKAAFMQQAIAT 134
Query: 121 TAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E Q D+I +RA + ++ + S L +
Sbjct: 135 LGLKNAQAVHGRVEEF-QADVPFDLICSRAFSSIENFIALSQHVLAE 180
>gi|315128179|ref|YP_004070182.1| glucose-inhibited division protein B [Pseudoalteromonas sp. SM9913]
gi|315016692|gb|ADT70030.1| glucose-inhibited division protein B [Pseudoalteromonas sp. SM9913]
Length = 206
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++++ ++L + L KW+K NL S ++ ++H+ DS V H +ID
Sbjct: 14 DIALTQKQQQQLVSYVELLDKWNKAYNLTSVRLPQEMMVKHIMDS-LVVAPHLTGHHYID 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI+ +I L + L++S K+ FL +V + E Q
Sbjct: 73 VGTGPGLPGIVLAIALPDTQ---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEEYQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D + +RA A L ++++ +
Sbjct: 130 PSVKLDGVLSRAFASLQDMIDWCSHLI 156
>gi|241667529|ref|ZP_04755107.1| glucose-inhibited division protein B [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254876075|ref|ZP_05248785.1| methyltransferase glucose-inhibited cell division protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842096|gb|EET20510.1| methyltransferase glucose-inhibited cell division protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 204
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 6/164 (3%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+R + + E +E+ + L KW+K N+ + ++D ++H+ DS
Sbjct: 1 MDSMKDKIRQALVELDIQATEEQIEQWLEYLKLLEKWNKVYNMTAIKEIDDMLVKHLFDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G+GGG PG++ +I + L++S KK FL+ V +
Sbjct: 61 LAVAKYIKGS-STVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLG 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D I +RA + +DT E +L +
Sbjct: 117 LDN--INPLNIRIENLDGSFDNIISRAFSSVDTFYELCKHFLTK 158
>gi|157964061|ref|YP_001504095.1| 16S rRNA methyltransferase GidB [Shewanella pealeana ATCC 700345]
gi|189040717|sp|A8HAH3|RSMG_SHEPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157849061|gb|ABV89560.1| methyltransferase GidB [Shewanella pealeana ATCC 700345]
Length = 207
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + ++L F + KW+K NL S E IRH+ DS V H
Sbjct: 6 LNDYLAEVGLTATEQQKKQLVDFVGMLNKWNKAFNLTSVRDPEQMLIRHIMDS-LVVSPH 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I E L++S K+ F + V +
Sbjct: 65 LKGSRFIDVGTGPGLPGIPLAILNPDKE---FVLLDSLGKRIRFQKQVQFELGINNISSI 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 122 ESRVEAYQPKDLFDGVLSRAFASIQDMLHWCHHL 155
>gi|254491148|ref|ZP_05104329.1| methyltransferase GidB [Methylophaga thiooxidans DMS010]
gi|224463661|gb|EEF79929.1| methyltransferase GidB [Methylophaga thiooxydans DMS010]
Length = 211
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + ++L + L KW+K NL S RH+ DSL V + +D
Sbjct: 18 GIALGHDQQQQLLRYVALMHKWNKVYNLTSVRDPAQMMSRHIIDSLSV-LPYLNAPSLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+GGG PGI +I V L++S +KK FL+ V + V R+++
Sbjct: 77 VGTGGGLPGIPAAIAYPD---SAVTLLDSNSKKTRFLQQVKAELGLSNVTVVHGRVEQVS 133
Query: 137 QMITTCDVISARALADLDTLLEYS 160
++ +I+ARA A +D ++E +
Sbjct: 134 --LSKFAIITARAFASIDDIIELA 155
>gi|192288726|ref|YP_001989331.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris TIE-1]
gi|238692577|sp|B3Q8A6|RSMG_RHOPT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|192282475|gb|ACE98855.1| methyltransferase GidB [Rhodopseudomonas palustris TIE-1]
Length = 223
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
L + +L+ + L +W K NLV+ ST+ W RHV DSL++ L P
Sbjct: 17 DKAAALKLIPIPSALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLMP 76
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ W+D GSGGGFPG++ + ++ + G V L+E KKA+FLR ++ A G V
Sbjct: 77 HARRWLDFGSGGGFPGVVLACAMADVGG-HVTLVERIAKKAAFLREALRVAGAPGTVVLA 135
Query: 131 RIQEAPQMITTC-DVISARALADLDTLLEYSFPWLYQ 166
I + D I+ARA+A L L+ ++ P +
Sbjct: 136 DIGDNVDRFPQALDCITARAVAPLHQLIGFAEPLMTP 172
>gi|83591333|ref|YP_431342.1| methyltransferase GidB [Moorella thermoacetica ATCC 39073]
gi|123523727|sp|Q2RFJ0|RSMG_MOOTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83574247|gb|ABC20799.1| 16S rRNA m(7)G-527 methyltransferase [Moorella thermoacetica ATCC
39073]
Length = 240
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
+ E + +E + L L +++++NL + + E+ W +HV DSL +F P
Sbjct: 16 GITLKPEQIAMIEAYTGLLLDYNQRVNLTAITDREEIWRKHVLDSLLLFLALEIPPAAKV 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACR 131
ID+G+G G PG+I I +E L+ES+NKK +FL+ V +G A
Sbjct: 76 IDIGTGAGIPGLILKIYRPDLEMA---LLESQNKKVAFLKKAVATLGLQGIECLWGRAED 132
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
I + D+ +R LA ++TL EY P++
Sbjct: 133 IGRQKNYRESFDLAVSRGLAGMNTLAEYCLPFVR 166
>gi|254442849|ref|ZP_05056325.1| methyltransferase GidB [Verrucomicrobiae bacterium DG1235]
gi|198257157|gb|EDY81465.1| methyltransferase GidB [Verrucomicrobiae bacterium DG1235]
Length = 212
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 6 SNSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L + + +S E + +L + L +W+ KINL+S S VE+ RH+ SL
Sbjct: 1 MNFDL--SIVSKHLPELSPEQIAQLAQYAELIAEWNSKINLISRSDVENLPKRHILHSLA 58
Query: 65 VFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ ++ + ID+G+GGGFPGI +I L++S KK ++ +++
Sbjct: 59 IAKVMAFQPDSTVIDVGTGGGFPGIPLAIAFPETR---FLLVDSIGKKIKVVQDCIERLG 115
Query: 123 A-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
F CR++E + D I ARA+ L +++ + +K
Sbjct: 116 LTNAVAFNCRVEEVDR---QVDFIVARAVTQLPKFMDW----IRKK 154
>gi|253702730|ref|YP_003023919.1| methyltransferase GidB [Geobacter sp. M21]
gi|259495496|sp|C6DYR8|RSMG_GEOSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|251777580|gb|ACT20161.1| methyltransferase GidB [Geobacter sp. M21]
Length = 217
Score = 95.5 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 1/160 (0%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ + LE L F KW++KINL + + E+ ++H+ DSL + +
Sbjct: 7 ELLKKGAAELGVQLDAAQLESLNLFAEELKKWNRKINLTAITGDEEIALKHLVDSLSLLK 66
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+GSGGGFP I I +E V+ + K ++ T
Sbjct: 67 AVRGPGRLLDIGSGGGFPCIPVKIVQPDLEMVSVDAVVKKISFQKQAVRLLNLTGFTALH 126
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A + + D + +RA +D+ + + + P L +
Sbjct: 127 VRAETL-AQEYAASFDWVVSRAFSDIPSFVAMALPVLKPE 165
>gi|300814759|ref|ZP_07095007.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511146|gb|EFK38398.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 231
Score = 95.1 bits (235), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ +Y ++ Y ++ E +E E F L+++K N+ ++F ++H DSL +F+
Sbjct: 1 MTLKDYFID-YKLNNENIEDFEKFRKFLLEYNKITNITRIVDEDEFNVKHYLDSLSIFKT 59
Query: 69 --HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+DLG+GGGFPG+ + + ++L++S NK+ FL +++
Sbjct: 60 GLIRDNMKILDLGTGGGFPGVPLKLY---KKDLDISLVDSLNKRIVFLNKAIEELDLKNI 116
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
K R +E ++++RA+A L TLLEY+ P++
Sbjct: 117 KAIHARAEELAFDKDYREKFQLVTSRAVARLRTLLEYALPFV 158
>gi|282881764|ref|ZP_06290422.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
gi|281298374|gb|EFA90812.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
Length = 231
Score = 95.1 bits (235), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ +Y + Y ++ E +E E F L+++K N+ ++F ++H DSL +F+
Sbjct: 1 MTLKDYFIK-YKLNNENIEDFEKFRKFLLEYNKITNITRIVDEDEFNVKHYLDSLSIFKT 59
Query: 69 --HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+DLG+GGGFPG+ + + ++L++S NK+ FL +++
Sbjct: 60 GLIRDNMKILDLGTGGGFPGVPLKLY---KKDLDISLVDSLNKRIVFLNKAIEELDLKNI 116
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
K R +E ++++RA+A L TLLEY+ P++
Sbjct: 117 KAIHARAEELAFDEDYREKFQLVTSRAVARLRTLLEYALPFV 158
>gi|253987527|ref|YP_003038883.1| 16S rRNA methyltransferase GidB [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253778977|emb|CAQ82137.1| methyltransferase GidB [Photorhabdus asymbiotica]
Length = 213
Score = 95.1 bits (235), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 9/163 (5%)
Query: 8 SILRANYLL---NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+L LL +S++ ++L + + KW+K NL S E +RH+ DS+
Sbjct: 7 IVLNKLELLLTKARIKLSQQQKQQLIAYVDMLNKWNKTYNLTSVRDPEQMLVRHIMDSI- 65
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ + +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 66 IVSPYLQGYRFIDVGTGPGLPGIPLAIVRPD---SHFTLLDSLGKRVRFLRQVQHELSLA 122
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E D + +RA A L ++ +
Sbjct: 123 NIEPVQSRVEEYLS-GPPFDGVISRAFASLQDMVSWCNHLSKP 164
>gi|15805055|ref|NP_293740.1| 16S rRNA methyltransferase GidB [Deinococcus radiodurans R1]
gi|20177912|sp|Q9RYD6|RSMG_DEIRA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|6457673|gb|AAF09607.1|AE001865_4 gidB protein [Deinococcus radiodurans R1]
Length = 253
Score = 95.1 bits (235), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLGSGGGF 84
E+ L ++++NL + T ED ++H DSL + +DLG+G GF
Sbjct: 30 EQFARLLALLRAGNERLNLTALKTEEDIVLKHFVDSLTTLRGGHLDGEWKTLDLGTGAGF 89
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACRIQEAPQMIT 140
P + +I + + ++S KK F+R + A + ++ +
Sbjct: 90 PALPLAILRPELR---LTPLDSIRKKIDFVRETAAELGLSNVTPQVGRAETLGQSAEHRG 146
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
+ D + ARA+A L L E + P L
Sbjct: 147 SYDRVVARAVAALPVLAELALPLLR 171
>gi|189040864|sp|Q07VT4|RSMG_SHEFN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 206
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 4/158 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ + + ++L F + KW+K NL + E IRHV DSL V
Sbjct: 6 LKTYLAEMNMSATELQQKQLIGFVEMLDKWNKAYNLTAVRDPEQMLIRHVMDSLTVSPY- 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I + L++S K+ F + V +
Sbjct: 65 LEGQRFIDVGTGPGLPGIPLAIMNPDKQ---FVLLDSLGKRIRFQKQVQFELKINNITSV 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA D + +RA A + +L + +K
Sbjct: 122 ESRVEAYIPEIKFDGVLSRAFASIQDMLSWCHHLPTEK 159
>gi|91795107|ref|YP_564758.1| glucose-inhibited division protein B [Shewanella denitrificans
OS217]
gi|123356335|sp|Q12HP1|RSMG_SHEDO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91717109|gb|ABE57035.1| methyltransferase GidB [Shewanella denitrificans OS217]
Length = 208
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + + + +L F + KW+K NL S + E IRHV DSL V
Sbjct: 6 LSAYLAEMNLSATEQQQGQLVGFVEMLNKWNKAYNLTSVRSPEQMLIRHVMDSLTVSPY- 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I E L++S K+ F + V +
Sbjct: 65 LSGKRFIDVGTGPGLPGIPLAIMNPDKE---FVLLDSLGKRIRFQKQVQFELKINNISSV 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA Q D + +RA A + +L + + +
Sbjct: 122 ESRVEAFQPEIKFDGVLSRAFASVQDMLTWCHHLPHNE 159
>gi|329955196|ref|ZP_08296153.1| 16S rRNA methyltransferase GidB [Bacteroides clarus YIT 12056]
gi|328526195|gb|EGF53214.1| 16S rRNA methyltransferase GidB [Bacteroides clarus YIT 12056]
Length = 206
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ E + Y L+ W+ KIN++S + + + HV +
Sbjct: 2 ELILKYFPDLTEEQKGQFAALYNLYTDWNSKINVISRKDIGNLYEHHVLHSLGIAKVIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ LV+ I K + A+ + +
Sbjct: 62 APGTKIMDLGTGGGFPGIPLAILFPEVQFHLVDSIGKKVRVATEVAGSIG--LKNVTTRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E Q+ D + +RA+ L LL+ + K+
Sbjct: 120 ARAEEEKQL---FDFVVSRAVMPLTDLLKIIRKNISPKQ 155
>gi|322807965|emb|CBZ05540.1| 16s rRNAmethyltransferase GidA [Clostridium botulinum H04402 065]
Length = 239
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 5/153 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + + +L + L +W+KKINL + ++ +H D +++F+ P
Sbjct: 15 NLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSL 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+ G G G E + L++S K+ +FL V+ + + R ++
Sbjct: 75 IDIGTG-AGFPGIPIKILKEDIEITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYA 133
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q + +RA+A+L L E+ P++ +
Sbjct: 134 QEIQHRQKYGIAVSRAVANLAVLSEFCIPFVEK 166
>gi|120600845|ref|YP_965419.1| 16S rRNA methyltransferase GidB [Shewanella sp. W3-18-1]
gi|146295046|ref|YP_001185470.1| 16S rRNA methyltransferase GidB [Shewanella putrefaciens CN-32]
gi|166224613|sp|A4YCI8|RSMG_SHEPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224615|sp|A1RQC0|RSMG_SHESW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120560938|gb|ABM26865.1| methyltransferase GidB [Shewanella sp. W3-18-1]
gi|145566736|gb|ABP77671.1| methyltransferase GidB [Shewanella putrefaciens CN-32]
gi|319428564|gb|ADV56638.1| methyltransferase GidB [Shewanella putrefaciens 200]
Length = 206
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 16 LNTYNVSR--ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L N+S E ++L F + KW+K NL S E +RH+ DS V H
Sbjct: 10 LAEINLSATAEQKKQLIDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDS-LVVSKHLQGE 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ID+G+G G PGI +I + L++S K+ F + V + R
Sbjct: 69 RFIDVGTGPGLPGIPLAIMNPNK---TFVLLDSLGKRIRFQKQVAFELGIRNISSVESRV 125
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 126 EAYQAEQQFDGVLSRAFASIQDMLSWCHHL 155
>gi|256833761|ref|YP_003162488.1| methyltransferase GidB [Jonesia denitrificans DSM 20603]
gi|256687292|gb|ACV10185.1| methyltransferase GidB [Jonesia denitrificans DSM 20603]
Length = 210
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ L+ + + + S E++E F +K L+ ++ W RH+ +S V
Sbjct: 1 MDTHLQRDDVERYFGAS---FERIEKFATNLAHEGEKRGLIGPRELDRLWDRHILNSAAV 57
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
P S DLGSG G PG++ + V L+E ++ +L +V+
Sbjct: 58 VPFIPEGSSVADLGSGAGLPGLVIACMRPE---AHVRLVEPMERRCVWLEEMVETLDLDN 114
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+V R +E T DV++ARA+A LD L ++ P L +
Sbjct: 115 VEVLRGRAEEFHGAFT-VDVVTARAVAALDKLSRWALPLLEPQ 156
>gi|225010940|ref|ZP_03701407.1| methyltransferase GidB [Flavobacteria bacterium MS024-3C]
gi|225004987|gb|EEG42942.1| methyltransferase GidB [Flavobacteria bacterium MS024-3C]
Length = 211
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ A + N + N++ + ++ L+ W+ KIN+VS +E+ ++RHV SL + +
Sbjct: 1 MDAKLIFNYFPNLTHQQQDQFIALEALYQDWNLKINVVSRKDIEELYLRHVLHSLAIAKF 60
Query: 69 HPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ +D+G+GGGFPGI +I + L+++ KK ++ VV
Sbjct: 61 ISFNPGAQVLDVGTGGGFPGIPLAILFPETQ---FTLVDAIGKKIKVVQEVVDGLGIENV 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E D + +RA+A + T + + + +
Sbjct: 118 RAIHQRVEEDNN---QYDFVVSRAVAAMPTFMRWIKGRIKK 155
>gi|198274749|ref|ZP_03207281.1| hypothetical protein BACPLE_00908 [Bacteroides plebeius DSM 17135]
gi|198272196|gb|EDY96465.1| hypothetical protein BACPLE_00908 [Bacteroides plebeius DSM 17135]
Length = 208
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + N+S ++ Y L+ W+ KIN++S + + + HV +
Sbjct: 2 DIILKYFPNLSEVQQQQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVMQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I LV+ I K K A+ + +
Sbjct: 62 RPETTVMDLGTGGGFPGIPLAILFPETHFHLVDSIGKKVKVATEIANAIG--LKNVTTRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
CR +E Q+ D + +RA+ L LL+ + +++
Sbjct: 120 CRAEEEKQL---FDFVVSRAVMPLTDLLKIIRKNIKKEQ 155
>gi|299143473|ref|ZP_07036553.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517958|gb|EFI41697.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 232
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ + + + + LEKLE + L L W+ K+NL + + ++ I+H DSL +F+ +
Sbjct: 1 MNLKNRIEEFGLKTDCLEKLEQYRELLLSWNDKMNLTAITEEDEVNIKHFLDSLSLFKTN 60
Query: 70 PYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GK 126
+ ID+G+G GFPGI+ I + + L +S NK+ FL V+++ +
Sbjct: 61 YFDGSKSVIDIGTGAGFPGIVLKIYNEDLN---ITLFDSLNKRLLFLNDVIERLKLKDIY 117
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E D+ +RA+A+L TLLEY P++
Sbjct: 118 TLHGRAEEFGRKDTHRECYDIAVSRAVANLTTLLEYDLPFVK 159
>gi|121602982|ref|YP_980311.1| 16S rRNA methyltransferase GidB [Polaromonas naphthalenivorans CJ2]
gi|189040705|sp|A1VIB2|RSMG_POLNA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120591951|gb|ABM35390.1| 16S rRNA m(7)G-527 methyltransferase [Polaromonas naphthalenivorans
CJ2]
Length = 221
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 60/159 (37%), Gaps = 14/159 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
+S + + +L + + KW++ NL S + H+ DSL
Sbjct: 20 QLQLSEQQINQLLAYQAMIAKWTQVYNLTSVRDPAEMMTHHLLDSLAAVPALQRYLHRSG 79
Query: 76 -------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+GSG G PG++ +I V +++ KKA+F++
Sbjct: 80 LEQGSRLLDVGSGAGLPGVVIAICCP---QVAVTCVDTVAKKAAFIKQAALALRLPN--L 134
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + DVI +RA A L ++S L +
Sbjct: 135 TGLHARVESITESFDVICSRAFASLADFTKWSAGALAPQ 173
>gi|312794884|ref|YP_004027806.1| methyltransferase gidB [Burkholderia rhizoxinica HKI 454]
gi|312166659|emb|CBW73662.1| Methyltransferase gidB (EC 2.1.-.-) [Burkholderia rhizoxinica HKI
454]
Length = 236
Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 5/150 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
+S E + L + L KW+ NL + I+H+ DSL + S +D+
Sbjct: 38 LSEEQIGGLLDYVGLLTKWNAVYNLTAIREPRQMVIQHLLDSLAIVPYIASRSPASLLDV 97
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAP 136
GSGGG PGI+ ++ + S + +++ K + ++ + E
Sbjct: 98 GSGGGLPGIVIALAMPSCDVVTNDIVHKKTAFQQQAKGCLRLSNLSIVTGRVQALRAEI- 156
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA A+L + + +
Sbjct: 157 DVPVRFDAIVSRAFAELADFVTLARHLVRP 186
>gi|71909713|ref|YP_287300.1| glucose-inhibited division protein B [Dechloromonas aromatica RCB]
gi|123626244|sp|Q478A1|RSMG_DECAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71849334|gb|AAZ48830.1| 16S rRNA m(7)G-527 methyltransferase [Dechloromonas aromatica RCB]
Length = 205
Score = 94.8 bits (234), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ E +KL F L LKW+K NL + H+ DSL + ++ +D
Sbjct: 14 GIDLPDEAQQKLLAFRDLLLKWNKTYNLTALRDPAQAISHHLLDSLAILPHVGSGNL-LD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V+++++ KK +FL+ V + A R +
Sbjct: 73 VGSGGGLPGIPLAIARPEL---SVSMVDTVQKKTTFLQQAVIELALRNVTVH--HARVEE 127
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
M IS+RA A++ + + L
Sbjct: 128 MQGQYAQISSRAFAEIGLFISLTRHLLAP 156
>gi|88811303|ref|ZP_01126559.1| glucose-inhibited division protein B [Nitrococcus mobilis Nb-231]
gi|88791842|gb|EAR22953.1| glucose-inhibited division protein B [Nitrococcus mobilis Nb-231]
Length = 203
Score = 94.8 bits (234), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L +W++ NL + D +RHV DSL V +D+GSG G PGI +
Sbjct: 17 RYIELLQRWNRTFNLTAIRAPLDMVVRHVLDSLTVHPY-VRGDRVLDVGSGAGLPGIPLA 75
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ V L++S KK FLR VV + A E + D + ARA
Sbjct: 76 LASPE---HSVVLLDSNGKKIRFLRQVVFELALTNVTVVQARAERFRPALPFDTVIARAF 132
Query: 151 ADLDTLLEYSFPWLYQ 166
ADL LL ++P L
Sbjct: 133 ADLPALLRIAWPLLAP 148
>gi|74318825|ref|YP_316565.1| 16S rRNA methyltransferase GidB [Thiobacillus denitrificans ATCC
25259]
gi|123772845|sp|Q3SF56|RSMG_THIDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|74058320|gb|AAZ98760.1| glucose inhibited division protein [Thiobacillus denitrificans ATCC
25259]
Length = 208
Score = 94.8 bits (234), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
+KL + L KW++ NL + H+ DSL ++ +D+GSGGG PG
Sbjct: 24 QKLLAYLALLDKWNRVYNLTAVRDAGRMVSHHLLDSLAAVPHFRGETV-LDVGSGGGLPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I +I ++ V LI+S KK +FL + E + DV++
Sbjct: 83 IPLAIARPDLQ---VTLIDSVAKKTAFLLQAKAELGLANLSVVTGRVEDYRPAARFDVVT 139
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA +DL + + +
Sbjct: 140 SRAFSDLREFVTLTRHLVK 158
>gi|316931726|ref|YP_004106708.1| methyltransferase GidB [Rhodopseudomonas palustris DX-1]
gi|315599440|gb|ADU41975.1| methyltransferase GidB [Rhodopseudomonas palustris DX-1]
Length = 223
Score = 94.8 bits (234), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
S+ L ++S +L+ + L +W K NLV+ ST+ W RHV DSL
Sbjct: 10 SLSDLDADKAAALRLVSISPALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSL 69
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ L P W+D GSGGGFPG++ + ++ + G V L+E KKA+FLR ++ A
Sbjct: 70 QLVSLVPNARRWLDFGSGGGFPGVVLACAMADVG-GHVTLVERIAKKAAFLREALRVAGA 128
Query: 124 RGKVFACRIQEAPQMITTC-DVISARALADLDTLLEYSFPWLYQK 167
G V I + D I+ARA+A L L+ ++ P + +
Sbjct: 129 PGTVMLADIGDNVDRFPQALDCITARAVAPLHQLIGFAEPLMTPR 173
>gi|56552876|ref|YP_163715.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ZM4]
gi|81598131|sp|Q5NL06|RSMG_ZYMMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56544450|gb|AAV90604.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ZM4]
Length = 221
Score = 94.8 bits (234), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------- 64
+L +SRET+EKL+ F NL++ STV+D W RH+ DS +
Sbjct: 9 WLDQHIGISRETVEKLDAFVACLHAEMAHQNLIARSTVDDLWGRHIIDSAQLLPLARKEA 68
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
F P W+DLGSG GFPGII +I + V L+ES+ K+ FL +
Sbjct: 69 AFNKKASPKSWLDLGSGAGFPGIIIAI----LSEMAVTLVESRRKRVEFLEKAAEAAGTP 124
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++ D+I+ARA A LD L +FP+ + +
Sbjct: 125 VTILGQRLENIEPQ--AFDIITARAFAPLDKLWRLAFPFSHNE 165
>gi|300791160|ref|YP_003771451.1| glucose inhibited division protein B [Amycolatopsis mediterranei
U32]
gi|299800674|gb|ADJ51049.1| glucose inhibited division protein B [Amycolatopsis mediterranei
U32]
Length = 227
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +++ + L + + L+ VE W RHV +S + + P + +D+GSG G
Sbjct: 20 ERVDQAAGYVELLERHGIERGLIGPREVERLWERHVLNSAVIGEQMPPGARVVDVGSGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITT 141
PG+ +I ++ + L+E ++ +L V +K + R +E + +
Sbjct: 80 LPGVPLAIARPDLD---IVLLEPMARRVDWLAEVAEKLELPIAIIRGRAEEPPVREQLGG 136
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D+++ARA+A L L ++ P +
Sbjct: 137 ADIVTARAVAPLARLADWCLPLVRP 161
>gi|332518948|ref|ZP_08395415.1| methyltransferase GidB [Lacinutrix algicola 5H-3-7-4]
gi|332044796|gb|EGI80989.1| methyltransferase GidB [Lacinutrix algicola 5H-3-7-4]
Length = 209
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+L + N++ + ++K E L+ W+ KIN+VS +++ ++RHV SL + ++ +
Sbjct: 2 ELILKYFPNLTEDQIDKFEKLSHLYQDWNLKINVVSRKDIDELYMRHVLHSLAIAKVIEF 61
Query: 72 PS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+GGGFPGI +I LV+ I K K + + + K
Sbjct: 62 KDGSDIMDVGTGGGFPGIPLAILFPECNFHLVDSIAKKLKVVNEVAQGLG--LENVKTTH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R++E T D I +RA+A + T + + + +++
Sbjct: 120 TRVEEIK---ETYDFIVSRAVAAMPTFVHWVKGKIKKEQ 155
>gi|257465889|ref|ZP_05630200.1| glucose inhibited division protein B [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917045|ref|ZP_07913285.1| glucose inhibited division protein B [Fusobacterium gonidiaformans
ATCC 25563]
gi|313690920|gb|EFS27755.1| glucose inhibited division protein B [Fusobacterium gonidiaformans
ATCC 25563]
Length = 234
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L+ ++S + +E L + L L++++ NL + + +H+ DSL +
Sbjct: 1 MKEYLQEGIQKLGISLSEKQIENLLTYVTLLLEYNQHTNLTAIREEKAVIEKHILDSLLL 60
Query: 66 FQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ P + ID+G+G GFPG++ +I L++S KK FL +V +
Sbjct: 61 QEYIPKDATTAIDIGTGAGFPGMVLAICNP---MIHFTLMDSVGKKTKFLEWVKEDLNLQ 117
Query: 124 RGKVFACRIQEAPQM---ITTCDVISARALADLDTLLEYSFPWLY 165
+V R ++ Q+ D+ R ++ L +LEY P+L
Sbjct: 118 NVEVINARAEDYIQISKRREYYDLGFCRGVSKLAVILEYMIPFLK 162
>gi|226952976|ref|ZP_03823440.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter sp. ATCC 27244]
gi|294650558|ref|ZP_06727915.1| glucose-inhibited division protein B [Acinetobacter haemolyticus
ATCC 19194]
gi|226836297|gb|EEH68680.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter sp. ATCC 27244]
gi|292823555|gb|EFF82401.1| glucose-inhibited division protein B [Acinetobacter haemolyticus
ATCC 19194]
Length = 211
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ ++S E L L + + W+K NL + ++ ++H+ DSL +
Sbjct: 8 LKQGSQALGLSLSEEALTLLLKYQDALVLWNKAYNLTAIREPKEMLVKHLLDSLSILNDL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + +D+G+GGG PG+I ++ + L++S KK FL+ + + +
Sbjct: 68 PAGRL-LDVGTGGGMPGMIIALCQPERD---CVLLDSNGKKIRFLKQFIADLKLKNVIAV 123
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
E+ + DVI++RA A L + + P+++ +
Sbjct: 124 QTRVESEDSISELGHFDVITSRAFASLTDFVNAAQPYMHDQ 164
>gi|217968662|ref|YP_002353896.1| 16S rRNA methyltransferase GidB [Thauera sp. MZ1T]
gi|217505989|gb|ACK53000.1| methyltransferase GidB [Thauera sp. MZ1T]
Length = 240
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +ET+++L F L LKW+K NL + + ++ H+ DSL V + D
Sbjct: 43 GLALPQETIDRLLAFGELLLKWNKVYNLTAIRSPQELITHHLLDSLAVLPQLEAVNRLAD 102
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PG++ +I + +V+ IE+ KKASF + + V R+++
Sbjct: 103 IGSGGGLPGVVLAIVRPGL---VVSSIETVGKKASFQQQAKIELGLDNFSVLNQRVEQVR 159
Query: 137 QMI---TTCDVISARALADLDTLLEYSFPWLYQ 166
+ +RA + L + S + +
Sbjct: 160 PQSLPGGAPEGAISRAFSSLADFVALSGHLVAE 192
>gi|333030417|ref|ZP_08458478.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
coprosuis DSM 18011]
gi|332741014|gb|EGJ71496.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
coprosuis DSM 18011]
Length = 206
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + N++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 2 ELILKYFPNLTEEQKKQFAALYDLYIDWNSKINVISRKDIENLYPHHVLHSLGIARVINF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I + LV+ I K + A + +
Sbjct: 62 KPGTHVMDLGTGGGFPGIPLAILFPETKFHLVDSIRKKVRVAQEVATAIG--LKNVTFKH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R QE Q D + +RA+ L L++
Sbjct: 120 ARAQEEKQE---FDFVVSRAVMPLQDLVDI 146
>gi|251793667|ref|YP_003008397.1| 16S rRNA methyltransferase GidB [Aggregatibacter aphrophilus
NJ8700]
gi|247535064|gb|ACS98310.1| methyltransferase GidB [Aggregatibacter aphrophilus NJ8700]
Length = 210
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 6/165 (3%)
Query: 1 MKYCDSNSILRANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
M D + LL +V+ + ++L L KW+K NL S ++ ++H
Sbjct: 1 MANLDMQLADKLKTLLKQTALSVTEQQQQQLVKLVSLLNKWNKAYNLTSVRDPQEMLVKH 60
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ DS V + +ID+G+G G PG+ +I L++S K+ SF+R+ V
Sbjct: 61 ILDS-LVVSSYLQGDRFIDVGTGPGLPGLPLAIINPDK---HFVLLDSLGKRISFIRHAV 116
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + E Q D + +RA A L + ++
Sbjct: 117 HELGLTNVEPVLKRVEEYQPDHQFDGVLSRAFASLKDMTDWCSHL 161
>gi|145588205|ref|YP_001154802.1| methyltransferase GidB [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189040706|sp|A4SUS4|RSMG_POLSQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145046611|gb|ABP33238.1| 16S rRNA m(7)G-527 methyltransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 222
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 10/156 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED-----SLRVFQLHPYP 72
++S + + LE F +W++ NL + E H+ D + L
Sbjct: 14 GLDLSPQNVADLELFLQEMTRWNQVHNLTAIDNEEGSIRLHLIDSIAVLPVMRRFLPQQN 73
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
DLGSGGG P I +I + + LIE+ KK +FL++V K +V + R
Sbjct: 74 PKIADLGSGGGLPAIPIAIVEPNWR---LTLIEAIRKKTAFLQHVRGKLKLKNIEVISDR 130
Query: 132 IQEAP-QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ Q D + +RA +L L+ S P L
Sbjct: 131 VENVALQQSGQFDAVISRAFTNLARFLDLSLPLLKP 166
>gi|288924953|ref|ZP_06418889.1| 16S rRNA methyltransferase GidB [Prevotella buccae D17]
gi|315607986|ref|ZP_07882979.1| glucose inhibited division protein B [Prevotella buccae ATCC 33574]
gi|288338143|gb|EFC76493.1| 16S rRNA methyltransferase GidB [Prevotella buccae D17]
gi|315250455|gb|EFU30451.1| glucose inhibited division protein B [Prevotella buccae ATCC 33574]
Length = 208
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 12/160 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQ 67
L Y N + E +L+ L+ +W+ KIN++S +++ + RHV ++
Sbjct: 4 LIKKYFPNLSKIQEEQYAQLD---QLYREWNAKINVISRKDMDNLYERHVLHSLAIACNI 60
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ +D G+GGGFPGI +I ++ +I+ KK + V Q
Sbjct: 61 HFRPGTEVLDFGTGGGFPGIPLAIMFPEVKFR---MIDGTGKKIRVVNEVAQALELKNVT 117
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E D + +RA+ L L++ + +
Sbjct: 118 AVHQRGEEEK---GKFDFVVSRAVMPLPDLVKIVKRNIRK 154
>gi|88803564|ref|ZP_01119089.1| glucose-inhibited division protein B [Polaribacter irgensii 23-P]
gi|88780576|gb|EAR11756.1| glucose-inhibited division protein B [Polaribacter irgensii 23-P]
Length = 209
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I+ + ++S+ +E+ E L+ W+ KIN+VS +++ ++RHV SL + +
Sbjct: 2 EIIHKYFK----DLSQTQIEQFEKLQGLYQDWNLKINVVSRKDIDELYLRHVLHSLAIAK 57
Query: 68 LHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ + S +D+G+GGGFPGI +I + L++S KK + VV+
Sbjct: 58 VVQFKAGSKVLDVGTGGGFPGIPLAILFPETQFH---LVDSIGKKIKVVDDVVEGLGLEN 114
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ R++E D I +RA+A ++T + ++ + +K+
Sbjct: 115 VETTNGRVEELKDT---YDFIVSRAVAQMETFVRWTKGRISKKQ 155
>gi|255691824|ref|ZP_05415499.1| 16S rRNA methyltransferase GidB [Bacteroides finegoldii DSM 17565]
gi|260622545|gb|EEX45416.1| 16S rRNA methyltransferase GidB [Bacteroides finegoldii DSM 17565]
Length = 206
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 2 EIILKYFPDLTEEQRKQFAALYDLYIDWNSKINVISRKDIENLYEHHVLHSLGIAKVIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I + LV+ I K + A+ + +
Sbjct: 62 RPGTSVMDLGTGGGFPGIPLAILFPETQFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R +E +M D + +RA+ L L++
Sbjct: 120 ARAEEEKRM---FDFVVSRAVMPLADLIKI 146
>gi|170718146|ref|YP_001785175.1| 16S rRNA methyltransferase GidB [Haemophilus somnus 2336]
gi|168826275|gb|ACA31646.1| methyltransferase GidB [Haemophilus somnus 2336]
Length = 220
Score = 94.8 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 7 NSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + + N+LL + + E+L L KW+K NL S + ++H+ DS+
Sbjct: 7 NLMEKLNFLLKNTALLPTNLQKERLVQLVLLLNKWNKAYNLTSVRDPMEMLVKHILDSI- 65
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
V + +I+ID+G+G G PG+ +I + L++S K+ SF+R V++
Sbjct: 66 VVSPYLQGNIFIDVGTGPGLPGLPLAIINPDKKFF---LLDSLGKRISFIRNAVRELELT 122
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++E D + +RA A L + E+ L +
Sbjct: 123 NVEPVLSRVEEFKP-DHQFDGVLSRAFASLKDMTEWCQHLLTDQ 165
>gi|282900470|ref|ZP_06308419.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194663|gb|EFA69611.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
Length = 249
Score = 94.4 bits (233), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-------WI 76
E +L+ Y L + +++INL + ++FW +H+ DSLR + I
Sbjct: 27 EQGNQLQKLYDLIVLANRQINLTRITEPKEFWEKHLWDSLRGVAPQQHFLPELNAAGSII 86
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSG GFPG+ I + V L++S KK +F+ ++K R +E
Sbjct: 87 DIGSGAGFPGLPIGIVFPHYQ---VTLLDSTRKKVNFINSAIEKLPLSNATTILGRAEEI 143
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
Q ++ RA+A EY+ P + +
Sbjct: 144 GQDTPYREKYNLAVIRAVASASICSEYALPLIKK 177
>gi|110004186|emb|CAK98524.1| putative glucose inhibited division methyltransferase protein b
[Spiroplasma citri]
Length = 232
Score = 94.4 bits (233), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I L ++ E ++L+ +Y ++ ++ +NL + E+ +++H DS + +
Sbjct: 2 IKLIKTALPALQITPEQEKQLQVYYQYLIEQNQIMNLTTIIKEEEVYLKHFLDSGLLLKE 61
Query: 69 HPYPSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G 125
+ D+GSG GFPG++ I +I+ + +IES K+ FL+ +V K +
Sbjct: 62 FSFSKEMTVSDVGSGAGFPGLVLKILCPTIK---LTIIESLEKRCLFLQRLVLKLQLKGV 118
Query: 126 KVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R +E + D++ +RA+A+L LLE +
Sbjct: 119 EIIHARAEEYSWAHSESFDIVVSRAVANLGMLLELVVRMVK 159
>gi|294674332|ref|YP_003574948.1| methyltransferase GidB [Prevotella ruminicola 23]
gi|294471908|gb|ADE81297.1| methyltransferase GidB [Prevotella ruminicola 23]
Length = 208
Score = 94.4 bits (233), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--F 66
+ A + + +S E ++ + L+ W+ KIN++S ++ + HV SL +
Sbjct: 1 MTAEIIQKYFPELSDEQRQQFDALDALYRDWNTKINVISRKDIDQLYEHHVLHSLAIAKM 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D G+GGGFPG+ SI + LI+ KK + V +
Sbjct: 61 INFRPGTRILDFGTGGGFPGVPLSILFPECQ---FKLIDGTGKKIRVAQEVCNAIGLKN- 116
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
D I +RA+ L L++ + +++
Sbjct: 117 -CQPTHLRGEDEKDKYDFIVSRAVMPLPDLVKLMRKNISKQQ 157
>gi|124026579|ref|YP_001015694.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. NATL1A]
gi|189040707|sp|A2C4M0|RSMG_PROM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123961647|gb|ABM76430.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. NATL1A]
Length = 248
Score = 94.4 bits (233), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWID 77
S + L + + L +W+KKINL +DFW V DSL +ID
Sbjct: 24 SEKQLAQFIHLQELLKEWNKKINLTRLVDGDDFWTAQVCDSLLPLYEELQHPEVSHKYID 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEA 135
+GSG GFPGI +I + + + + L++S +KK +FL+ V ++ R KV R +EA
Sbjct: 84 IGSGCGFPGIAIAIAMPNSD---ITLLDSSSKKTTFLKEVSKEIGLDSRIKVVTERAEEA 140
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
P + D ARA+A + + EY P+L
Sbjct: 141 GRNPIFRSNFDYAIARAVASANVVAEYLVPFL 172
>gi|207722122|ref|YP_002252560.1| methyltransferase [Ralstonia solanacearum MolK2]
gi|206587296|emb|CAQ17880.1| methyltransferase gidb (glucose inhibited divisionprotein b)
[Ralstonia solanacearum MolK2]
Length = 225
Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--------SLRVFQLH 69
++ L++L+ + L KW++ NL + D H+ D + RV ++
Sbjct: 23 GLSLDAAQLDRLQAYQALLGKWNRVYNLTAIRDAGDMLTHHLLDSLAAVPRIAERVRRVQ 82
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
P +D+GSGGG PGI +I I V +++ KK +FL + +
Sbjct: 83 PEAPRVLDVGSGGGLPGIPLAIACPDI---SVTMVDIVQKKTAFLTQCRAELGLGNAQSH 139
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+++ T VI++RA A+L+ + + L
Sbjct: 140 WGHVEKLAD-ATGYGVITSRAFAELNDFVRLAGHLLAP 176
>gi|257067214|ref|YP_003153470.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
gi|256799094|gb|ACV29749.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
Length = 210
Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L+ + NL + + + +H +DSL V +D+G+G GFPGI
Sbjct: 6 KIYMDYLLEVNSHTNLTAITDPSEIETKHFKDSLTVLDYIKEGDRVLDIGAGAGFPGIPL 65
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMITTCDVISA 147
I+ + + LI+S NKK F+ V++K + + R ++ A + T DV+ +
Sbjct: 66 RIE----KDIDLTLIDSVNKKVKFMNEVIEKLGLTKARAIHTRAEDFAKEERETYDVVVS 121
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A++ TL EY P L
Sbjct: 122 RAVANMATLSEYCLPMLK 139
>gi|302390789|ref|YP_003826610.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
gi|302201417|gb|ADL08987.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
Length = 250
Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
+ E + L F ++W+K+INL + E F ++H+ D + +
Sbjct: 17 GIEIDPEKAKLLGIFKDEIVEWNKRINLTAIVDEEQFIVKHIIDSLIILKKIDFHSGAKL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+G+G GFPG+ I + +V L++S KK FL++ V+K R V R +E
Sbjct: 77 VDVGTGAGFPGVPVKIMR---QDLVVLLMDSSRKKTEFLKHAVKKLGLQRTDVLCARAEE 133
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLY 165
A + D ARA++ L+TL+E P +
Sbjct: 134 AAKSGGYREMYDAAVARAVSGLNTLVELCLPLVK 167
>gi|298484213|ref|ZP_07002378.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D22]
gi|298269626|gb|EFI11222.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D22]
Length = 206
Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ E ++ Y L++ W+ KIN++S +E+ + HV +
Sbjct: 2 EIILKYFPDLTEEQRKQFAALYDLYIDWNSKINVISRKDIENLYEHHVLHSLGIAKTIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I +L++S KK V + F
Sbjct: 62 RPGTSIMDLGTGGGFPGIPLAILFPE---VTFHLVDSIGKKVRVATEVANAIGLKNVTFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
E + T D + +RA+ L L++
Sbjct: 119 HARAEEEK--RTFDFVVSRAVMPLADLIKI 146
>gi|282896993|ref|ZP_06304995.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
gi|281197645|gb|EFA72539.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
Length = 252
Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-------WI 76
E +L+ Y L + +++INL + ++FW +H+ DSLR + I
Sbjct: 30 EQGNQLQKLYDLIVVANRQINLTRITQPKEFWEKHLWDSLRGVSPEQHFLPELNAAGSII 89
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSG GFPG+ I + V L+++ KK +F+ ++K R +E
Sbjct: 90 DIGSGAGFPGLPIGIVFPHHQ---VTLLDATRKKVNFINSAIEKLPLSNATTILGRAEEI 146
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D+ RA++ EY+ P + +
Sbjct: 147 GQETLYREKYDLAVIRAVSTASVCAEYTLPLIKK 180
>gi|90415384|ref|ZP_01223318.1| Glucose inhibited division protein [marine gamma proteobacterium
HTCC2207]
gi|90332707|gb|EAS47877.1| Glucose inhibited division protein [marine gamma proteobacterium
HTCC2207]
Length = 222
Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S E +KL + L + W+K NL + H+ DSL V + ID+G+G
Sbjct: 27 SAEQRDKLLAYLQLLITWNKAYNLTAIRDPGQMIRLHLLDSLAVLPHVVGKRL-IDVGTG 85
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PGI +I + L++S KK FL E Q
Sbjct: 86 AGLPGIPLAIMCPDRD---FTLLDSNGKKTRFLFQARCDLGLNNLREINARVEEHQPQVA 142
Query: 142 CDVISARALADLDTLLEYSFPWL 164
D + +RA + +++ L
Sbjct: 143 YDAVLSRAFTSVAGMVDKCSHLL 165
>gi|313887693|ref|ZP_07821375.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846302|gb|EFR33681.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 230
Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSI 74
Y++ + ++K E + L L +++ NL + ++F ++H D L +
Sbjct: 7 KDYDLDTKNIDKYERYKKLILDYNQHTNLTRITEDDEFNVKHFLDCLSLLKTGKFNGCEK 66
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
ID+G+G GFPGI + ++ V L++S K+ FL V++ + R +
Sbjct: 67 IIDIGTGAGFPGIPLKLYNERLD---VTLLDSLRKRIDFLDGVIEDLGLENIRAIHARAE 123
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
E + D+ +RA+A+L TL EY+ ++
Sbjct: 124 EIARTDEYREQFDLAVSRAVANLSTLTEYAMGFVK 158
>gi|260913577|ref|ZP_05920054.1| methyltransferase GidB [Pasteurella dagmatis ATCC 43325]
gi|260632353|gb|EEX50527.1| methyltransferase GidB [Pasteurella dagmatis ATCC 43325]
Length = 210
Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ LL +++ + +L F L KW+K NL S + ++H+ DS+ +
Sbjct: 11 KLETLLKQTALSITDQQKVQLVKFVLLLHKWNKAYNLTSVRDPIEMLVKHILDSI-IISP 69
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +ID+G+G G PG+ +I + L++S K+ SF+R V++
Sbjct: 70 YLEGERFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRISFIRNAVRELGLNNVEP 126
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A L + ++
Sbjct: 127 VLSRVEEYQPEQLFDGVLSRAFASLKDMTDWCQHL 161
>gi|163754285|ref|ZP_02161408.1| glucose-inhibited division protein B [Kordia algicida OT-1]
gi|161326499|gb|EDP97825.1| glucose-inhibited division protein B [Kordia algicida OT-1]
Length = 209
Score = 94.4 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ + ++ E LE+ L+ +W+ +IN++S +++ ++RHV L + ++ P+
Sbjct: 2 EIIQKYFTELTTEQLEQFGQLEALYKEWNAQINVISRKDIDELYLRHVLHGLAIAKVQPF 61
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +D+G+GGGFPGI +I ++ LV+ I K K + + T
Sbjct: 62 VAGSRILDVGTGGGFPGIPLAILFPEVQFVLVDAIGKKIKVVQAVAESIGLT--NVSAHH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R ++ D I +RA+ ++ +++ + +K+
Sbjct: 120 MRAEKVK---GEFDFIVSRAVTNMPDFVKWVRKKVAKKQ 155
>gi|332879368|ref|ZP_08447065.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682788|gb|EGJ55688.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 206
Score = 94.0 bits (232), Expect = 5e-18, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +S + E+ L+ W+ KIN++S +++ + HV + F
Sbjct: 2 ELILKYFPELSEKQTEQFHQLDALYHDWNAKINVISRKDIDNLYEHHVLHSLGIAEFTRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I +L++S KK V ++ F
Sbjct: 62 KSGTEIMDLGTGGGFPGIPLAIMFPD---CHFHLVDSIGKKIKVCMEVARELGVENVTFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
E + D + +RA+ L L++
Sbjct: 119 HCRAEEEK--AKFDFVVSRAVMPLADLVKI 146
>gi|332524942|ref|ZP_08401128.1| 16S rRNA methyltransferase GidB [Rubrivivax benzoatilyticus JA2]
gi|332108237|gb|EGJ09461.1| 16S rRNA methyltransferase GidB [Rubrivivax benzoatilyticus JA2]
Length = 207
Score = 94.0 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSI 74
V+ +E LE + L +W+ NL + +H+ D L V +
Sbjct: 14 GLEVTPGQVEALERYLALLQRWNATYNLTAVRDPAQMLTQHLADCLAVVKPLAARLPAGR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+D+GSGGG PG++ +I G V +++ KKA+F+R + R + R++
Sbjct: 74 VLDVGSGGGLPGVVLAIM-----GWDVTCVDTVGKKAAFIRQAAAELRLPRLQAQHARVE 128
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV+++RA + L + + L
Sbjct: 129 QLK--AAPFDVVTSRAFSSLADFVTLTSALLKP 159
>gi|302531352|ref|ZP_07283694.1| 16S rRNA methyltransferase GidB [Streptomyces sp. AA4]
gi|302440247|gb|EFL12063.1| 16S rRNA methyltransferase GidB [Streptomyces sp. AA4]
Length = 229
Score = 94.0 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +E+ + L + L+ VE W RHV +S + + P + +D+GSG G
Sbjct: 23 ERVEQAAGYVELLATHGVERGLIGPREVERLWERHVLNSAVIGEQIPSEARVVDVGSGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITT 141
PG+ +I ++ + L+E ++ +L V +K + R +E + +
Sbjct: 83 LPGVPLAIARPDLD---IVLLEPMARRVDWLAEVAEKLELPITIVRGRAEERSVREQLGG 139
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV++ARA+A L L + P + +
Sbjct: 140 ADVVTARAVAPLARLAGWCLPLVRPE 165
>gi|255080220|ref|XP_002503690.1| predicted protein [Micromonas sp. RCC299]
gi|226518957|gb|ACO64948.1| predicted protein [Micromonas sp. RCC299]
Length = 320
Score = 94.0 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 28/179 (15%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV----- 59
D+++IL + + ++++ F L+ +K +NL + TV++ RHV
Sbjct: 76 DTDAILDSY-------LDDAQMDQVRTFATTLLEKNKVMNLTGALTVDEVLGRHVADSLA 128
Query: 60 --------EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
D+ + +D+GSG GFPG+ +I + E V L+++ K+
Sbjct: 129 LIPAIERALDAGASSRNPGAKIRVMDVGSGAGFPGMALAIARPTWE---VTLLDTLQKRT 185
Query: 112 SFLRYVVQKTAA-RGKVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
SFL + A + R ++A + DV++ARA+A+L L E P +
Sbjct: 186 SFLADAAAECGADNVRTLWSRAEDAGKVGNEHREAYDVVTARAVAELRVLAELCVPLVR 244
>gi|288818500|ref|YP_003432848.1| glucose inhibited division protein [Hydrogenobacter thermophilus
TK-6]
gi|288787900|dbj|BAI69647.1| glucose inhibited division protein [Hydrogenobacter thermophilus
TK-6]
gi|308752090|gb|ADO45573.1| methyltransferase GidB [Hydrogenobacter thermophilus TK-6]
Length = 196
Score = 94.0 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
++ + N +++S + +E + KW+K L + E IRH DSL +
Sbjct: 1 MIEDIFKRNGFDLSDQQVELFYTYMQELKKWNKVHRLTAIEEEEQIVIRHFVDSLTLALC 60
Query: 69 HPYP------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
D+GSGGGFPG+ I + L+ES +KK +FL YV K
Sbjct: 61 FEQKGLDVKGKSVCDVGSGGGFPGVPLKIYYG--PQINLTLVESVSKKCAFLEYVKAKLG 118
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V R ++ + + D++ RAL L+ ++ +
Sbjct: 119 LDYRVLCKRAEQLREN--SFDIVVCRALGKLEDIVPMLIRLSRE 160
>gi|226327000|ref|ZP_03802518.1| hypothetical protein PROPEN_00860 [Proteus penneri ATCC 35198]
gi|225204837|gb|EEG87191.1| hypothetical protein PROPEN_00860 [Proteus penneri ATCC 35198]
Length = 176
Score = 94.0 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
+ KW+K NL S + IRH+ DS+ V + +ID+G+G G PGI +I
Sbjct: 1 MLDKWNKAYNLTSVRDPQQMLIRHILDSI-VVSQYLEGEKFIDVGTGPGLPGIPLAIMRP 59
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLD 154
L++S K+ F++ V + E Q D + +RA A ++
Sbjct: 60 D---HHFVLLDSLGKRVRFMKQVQHELGLDNIEPVQYRVEEYQTEQPFDGVISRAFASMN 116
Query: 155 TLLEYSFPWLYQK 167
+L + + ++
Sbjct: 117 DMLSWCSHLVTEE 129
>gi|167571771|ref|ZP_02364645.1| methyltransferase GidB [Burkholderia oklahomensis C6786]
Length = 213
Score = 94.0 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWID 77
+S L + L KW+ NL + ++H+ DSL + + +D
Sbjct: 13 LSDAQHGALLDYVALLAKWNAVYNLTAIRDPRQMLVQHILDSLSIVPHLGARGAAATALD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PGI+ +I LS + V L + +KK++F + V R++
Sbjct: 73 VGSGGGLPGIVLAITLSEWQ---VTLNDIVHKKSAFQTQAKAELKLGNLSVVTGRVETLR 129
Query: 137 ---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +RA ADL + + +
Sbjct: 130 LGADVPGKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|160886034|ref|ZP_02067037.1| hypothetical protein BACOVA_04040 [Bacteroides ovatus ATCC 8483]
gi|237716320|ref|ZP_04546801.1| glucose-inhibited division protein B [Bacteroides sp. D1]
gi|237721001|ref|ZP_04551482.1| glucose-inhibited division protein B [Bacteroides sp. 2_2_4]
gi|262407923|ref|ZP_06084471.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_22]
gi|293373034|ref|ZP_06619403.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CMC 3f]
gi|294646731|ref|ZP_06724354.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CC 2a]
gi|294807740|ref|ZP_06766533.1| 16S rRNA methyltransferase GidB [Bacteroides xylanisolvens SD CC
1b]
gi|299145414|ref|ZP_07038482.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_23]
gi|156108847|gb|EDO10592.1| hypothetical protein BACOVA_04040 [Bacteroides ovatus ATCC 8483]
gi|229443967|gb|EEO49758.1| glucose-inhibited division protein B [Bacteroides sp. D1]
gi|229449836|gb|EEO55627.1| glucose-inhibited division protein B [Bacteroides sp. 2_2_4]
gi|262354731|gb|EEZ03823.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_22]
gi|292632102|gb|EFF50711.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CMC 3f]
gi|292637891|gb|EFF56286.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CC 2a]
gi|294445176|gb|EFG13850.1| 16S rRNA methyltransferase GidB [Bacteroides xylanisolvens SD CC
1b]
gi|298515905|gb|EFI39786.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_23]
Length = 206
Score = 94.0 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ E ++ Y L+ W+ KIN++S +E+ + HV +
Sbjct: 2 EIILKYFPDLTEEQRKQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAKVIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ LV+ I K + A+ + +
Sbjct: 62 RPGTSIMDLGTGGGFPGIPLAILFPEVKFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R +E + D + +RA+ L L++
Sbjct: 120 ARAEEEKRT---FDFVVSRAVMPLADLIKI 146
>gi|255535483|ref|YP_003095854.1| Ribosomal RNA small subunit methyltransferase G [Flavobacteriaceae
bacterium 3519-10]
gi|255341679|gb|ACU07792.1| Ribosomal RNA small subunit methyltransferase G [Flavobacteriaceae
bacterium 3519-10]
Length = 211
Score = 94.0 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SL 63
N+ L Y +S E + E L+ +W++KIN++S ++ + +H+ +
Sbjct: 1 MNAELIDKYFPE---LSAEQKNQFEKLDGLYREWNEKINVISRKDMDSLYEKHILHSLGI 57
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D+G+GGGFPGI +I ++ LI+S KK + ++ V +
Sbjct: 58 AKVMQFAPGTQVLDIGTGGGFPGIPLAILFPQVQ---FTLIDSIGKKITVVKEVSEGVGL 114
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ A + I +RA+ + L +
Sbjct: 115 KN--ITAVHGRAEDLKGKFHFIVSRAVTQMPVFLRW 148
>gi|162446949|ref|YP_001620081.1| glucose inhibited division protein B [Acholeplasma laidlawii PG-8A]
gi|189039369|sp|A9NEC5|RSMG_ACHLI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161985056|gb|ABX80705.1| glucose inhibited division protein B [Acholeplasma laidlawii PG-8A]
Length = 230
Score = 94.0 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIW 75
++ + + + +Y L + ++K NL ++ +D I+H DS+ + +
Sbjct: 11 GIKLTEQQNGQFDAYYNLLVAYNKHTNLTRITSRDDADIKHFLDSVLISKLVDLNKVVTL 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+G+G GFP I I +I+ V ++ES+ K+ FL+ + Q + R +
Sbjct: 71 CDMGAGAGFPSIPLLIVFPNIQ---VTIVESQIKRVQFLQELKQALGLEFNIVHDRAENF 127
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+++ARAL +L +LE+ P L
Sbjct: 128 SSKNYQQFDIVTARALGELRLILEFGVPMLK 158
>gi|72382843|ref|YP_292198.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str.
NATL2A]
gi|72002693|gb|AAZ58495.1| 16S rRNA m(7)G-527 methyltransferase [Prochlorococcus marinus str.
NATL2A]
Length = 235
Score = 94.0 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWID 77
S + L + + L +W+KKINL +DFW V DSL +ID
Sbjct: 11 SEKQLAQFIHLQELLKEWNKKINLTRLVDGDDFWTAQVCDSLLPLYEELQHPEVSHKYID 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEA 135
+GSG GFPGI +I + + + L++S +KK +FL+ V ++ R KV R +EA
Sbjct: 71 IGSGCGFPGIAIAIAMPNSN---ITLLDSSSKKTTFLKEVSKEIGLDSRIKVVTERAEEA 127
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
P + D ARA+A + + EY P+L
Sbjct: 128 GRNPIFRSNFDYAIARAVASANVVAEYLVPFL 159
>gi|260170515|ref|ZP_05756927.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D2]
gi|315918859|ref|ZP_07915099.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
D2]
gi|313692734|gb|EFS29569.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
D2]
Length = 206
Score = 94.0 bits (232), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ E ++ Y L+ W+ KIN++S +E+ + HV +
Sbjct: 2 EIILKYFPDLTEEQRKQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAKIIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ LV+ I K + A+ + +
Sbjct: 62 RPGTSIMDLGTGGGFPGIPLAILFPEVKFHLVDSIGKKVRVATEVANAIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R +E + D + +RA+ L L++
Sbjct: 120 ARAEEEKRT---FDFVVSRAVMPLADLIKI 146
>gi|224024052|ref|ZP_03642418.1| hypothetical protein BACCOPRO_00769 [Bacteroides coprophilus DSM
18228]
gi|224017274|gb|EEF75286.1| hypothetical protein BACCOPRO_00769 [Bacteroides coprophilus DSM
18228]
Length = 209
Score = 93.6 bits (231), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + N++ + Y L+ W+ KIN++S + + + HV +
Sbjct: 2 DIILKYFPNLTDTQKAQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I LV+ I K + A+ + V
Sbjct: 62 KPGTEVMDLGTGGGFPGIPLAILFPDTHFHLVDSIGKKVRVATEIAAAVG--LKNVTTRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
CR +E Q D + +RA+ L LL+ + +++
Sbjct: 120 CRAEEEKQ---RFDFVVSRAVMPLTDLLKIIRKNISKEQ 155
>gi|154496100|ref|ZP_02034796.1| hypothetical protein BACCAP_00384 [Bacteroides capillosus ATCC
29799]
gi|150274655|gb|EDN01719.1| hypothetical protein BACCAP_00384 [Bacteroides capillosus ATCC
29799]
Length = 238
Score = 93.6 bits (231), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 10/145 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSIWIDLGSGGGFP 85
L + L L+ ++ +NL + + + H DS + + ID+G+G GFP
Sbjct: 25 LARYGQLLLEKNQVMNLTAITDPDKVADLHFLDSAALLTLEGVDFKGKRVIDVGTGAGFP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA---PQMITT 141
G+ I SI + L++S K+ ++L V R +E +
Sbjct: 85 GLPLKILEPSI---SLTLLDSLGKRVNWLSEVCADLGLTDVSCVHARAEEQALEKGWRDS 141
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D +RA+ADL L E P++
Sbjct: 142 FDFAVSRAVADLRVLTELCLPYVKP 166
>gi|89889332|ref|ZP_01200843.1| glucose-inhibited methyltransferase division protein, gidB
[Flavobacteria bacterium BBFL7]
gi|89517605|gb|EAS20261.1| glucose-inhibited methyltransferase division protein, gidB
[Flavobacteria bacterium BBFL7]
Length = 213
Score = 93.6 bits (231), Expect = 7e-18, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 17/166 (10%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ NY ++S +E+ L+ +W+ +IN++S ++ + RHV SL + +
Sbjct: 4 IIKNYFP---HLSDHQMEQFAQLGDLYAEWNSQINVISRKDIDQLYTRHVLHSLGIACVV 60
Query: 70 PYPS---------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ +D+G+GGGFPGI +I L++ I K K + +Q
Sbjct: 61 RFRESLPNTPGGARVMDVGTGGGFPGIPLAIMFPKTNFHLIDAIGKKIKVVDTVVEALQ- 119
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ D I +RA+ ++ + ++ + +
Sbjct: 120 -LKNVTTQHGRAEKVK---GKFDFIVSRAVTNMPDFVSWTRNKIRK 161
>gi|189039677|sp|A5FR82|RSMG_DEHSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 235
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N ++ L +++ L + E +Y + ++ +INL + + +D I+H DS+ +
Sbjct: 1 MNELVYGLSAL-GISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSL 59
Query: 66 F-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+GSG GFPG+ I +I+ G L+E+ KKA FL + K
Sbjct: 60 VLAGIKGDEKLLDVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLS 116
Query: 125 -GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
++ + R ++ Q ++++RA+AD+ TL E + P+
Sbjct: 117 GVEIISQRAEDTAQNPLYRQKYSLVTSRAVADMATLAELTLPF 159
>gi|73748586|ref|YP_307825.1| 16S rRNA methyltransferase GidB [Dehalococcoides sp. CBDB1]
gi|123619642|sp|Q3ZXE0|RSMG_DEHSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|73660302|emb|CAI82909.1| methyltransferase GidB [Dehalococcoides sp. CBDB1]
Length = 235
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N ++ L +++ L + E +Y + ++ +INL + + +D I+H DS+ +
Sbjct: 1 MNELVYGLSAL-GISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSL 59
Query: 66 F-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+GSG GFPG+ I +I+ G L+E+ KKA FL + K
Sbjct: 60 VLAGIKGDEKLLDVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLS 116
Query: 125 -GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
++ + R ++ Q ++++RA+AD+ TL E + P+
Sbjct: 117 GVEIISQRAEDTAQNPLYRQKYSLVTSRAVADMATLAELTLPF 159
>gi|289432612|ref|YP_003462485.1| methyltransferase GidB [Dehalococcoides sp. GT]
gi|288946332|gb|ADC74029.1| methyltransferase GidB [Dehalococcoides sp. GT]
Length = 256
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N ++ L +++ L + E +Y + ++ +INL + + +D I+H DS+ +
Sbjct: 22 MNELVYGLSAL-GISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSL 80
Query: 66 F-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+GSG GFPG+ I +I+ G L+E+ KKA FL + K
Sbjct: 81 VLAGIKGDEKLLDVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLS 137
Query: 125 -GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
++ + R ++ Q ++++RA+AD+ TL E + P+
Sbjct: 138 GVEIISQRAEDTAQNPLYRQKYSLVTSRAVADMATLAELTLPF 180
>gi|257452320|ref|ZP_05617619.1| glucose inhibited division protein B [Fusobacterium sp. 3_1_5R]
gi|317058863|ref|ZP_07923348.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
3_1_5R]
gi|313684539|gb|EFS21374.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
3_1_5R]
Length = 234
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L+ ++S + +E L + L L++++ NL + + +H+ DSL +
Sbjct: 1 MKEYLQEGIQKLGISLSEKQIENLLTYVTLLLEYNQHTNLTAIREEKAVIEKHILDSLLL 60
Query: 66 FQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P + ID+G+G GFPG++ +I ++ L++ + K K +++ ++
Sbjct: 61 QEYIPKDATTAIDIGTGAGFPGMVLAICNPTVYFTLMDSVGKKTKFLEWVKENLK--LQN 118
Query: 125 GKVFACRIQEAPQM---ITTCDVISARALADLDTLLEYSFPWLY 165
+V R ++ Q+ D+ R ++ L +LEY P+L
Sbjct: 119 VEVINARAEDYIQISKRREYYDLGFCRGVSKLAVILEYMIPFLK 162
>gi|212695075|ref|ZP_03303203.1| hypothetical protein BACDOR_04613 [Bacteroides dorei DSM 17855]
gi|237710519|ref|ZP_04541000.1| glucose-inhibited division protein B [Bacteroides sp. 9_1_42FAA]
gi|237727016|ref|ZP_04557497.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
D4]
gi|265750295|ref|ZP_06086358.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_33FAA]
gi|212662391|gb|EEB22965.1| hypothetical protein BACDOR_04613 [Bacteroides dorei DSM 17855]
gi|229433872|gb|EEO43949.1| ribosomal RNA small subunit methyltransferase G [Bacteroides dorei
5_1_36/D4]
gi|229455241|gb|EEO60962.1| glucose-inhibited division protein B [Bacteroides sp. 9_1_42FAA]
gi|263237191|gb|EEZ22641.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_33FAA]
Length = 208
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + N+S + + Y L+ W+ KIN++S + + + HV +
Sbjct: 2 ELILKYFPNLSEQQKTQFAALYDLYTDWNSKINVISRKDIANLYEHHVLHSLGIAKVINF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ L++S KK V + F
Sbjct: 62 TPDTQIMDLGTGGGFPGIPLAILFPEVQFH---LVDSIGKKVKVATEVANAIGLKNVTFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
E + D + +RA+ L L++ + Q++
Sbjct: 119 HCRAEEEK--RKFDFVVSRAVMPLGDLIKIIRKNIRQEQ 155
>gi|149185270|ref|ZP_01863587.1| glucose inhibited division protein B [Erythrobacter sp. SD-21]
gi|148831381|gb|EDL49815.1| glucose inhibited division protein B [Erythrobacter sp. SD-21]
Length = 208
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Query: 19 YNVSR-ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
++S ET+EKLE + + +++ NLVS +++D W+RH DS ++ P + W
Sbjct: 13 LSLSDPETIEKLELLFNALREENERQNLVSRGSLDDVWVRHFADSAQLIPHVPRETKGPW 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSG GFPG++ ++ L+ES+ ++ +L+ +V + + E
Sbjct: 73 FDLGSGAGFPGLVLALLRPDEP---TVLVESRKRRLEWLQAMVTRLGLANCEIEGKRLEL 129
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
VISARA A L LL+ S +
Sbjct: 130 VDTR-KAAVISARAFAPLPKLLDLSARF 156
>gi|77920730|ref|YP_358545.1| methyltransferase GidB [Pelobacter carbinolicus DSM 2380]
gi|123573043|sp|Q39ZT2|RSMG_PELCD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77546813|gb|ABA90375.1| 16S rRNA m(7)G-527 methyltransferase [Pelobacter carbinolicus DSM
2380]
Length = 217
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Query: 14 YLLNTYNVSRET--LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
LL +S E ++L ++ L+W+++INL + E+ +H+ DSL V L
Sbjct: 7 ELLTRIGLSLEKPVCDRLLWYLDEMLRWNRRINLTAIENKEEALEKHLLDSLTVVPLLRG 66
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+GSG G P I I + V+ + K + ++ + +
Sbjct: 67 DERLLDMGSGAGLPSIPIKIARPQMCVLSVDSVHKKIVFQQHVARQLKLQGFEARACRIQ 126
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ T+ DV++ARAL L LL + P L K
Sbjct: 127 SLSQGESETSFDVVTARALTHLSDLLSMAEPLLNDK 162
>gi|109900603|ref|YP_663858.1| methyltransferase GidB [Pseudoalteromonas atlantica T6c]
gi|123063992|sp|Q15MT4|RSMG_PSEA6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|109702884|gb|ABG42804.1| 16S rRNA m(7)G-527 methyltransferase [Pseudoalteromonas atlantica
T6c]
Length = 212
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V+++ + +L F + KW+K NL S VE ++H+ DS+ V Q +ID
Sbjct: 20 DLQVTKDQISQLVGFVQMIDKWNKTYNLTSVRDVESMLLKHIMDSIVVAQHLSQSH-YID 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ F++ V + E
Sbjct: 79 VGTGPGLPGIPLAIMLPET---HFTLLDSLGKRVRFMKQVAYELKLDNIQPVQSRVEDYV 135
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ + +RA A L+ +L + +
Sbjct: 136 SPHQLNGVLSRAFASLNDMLNWCQHLI 162
>gi|34557261|ref|NP_907076.1| 16S rRNA methyltransferase GidB [Wolinella succinogenes DSM 1740]
gi|55976473|sp|Q7M9J8|RSMG_WOLSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|34482977|emb|CAE09976.1| GLUCOSE INHIBITED DIVISION PROTEIN B [Wolinella succinogenes]
Length = 193
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ LE+LE + L L+W++ NL + ++ H+ DSL + P D+G+
Sbjct: 15 FDDQMLERLERYTALLLEWNRAHNLTGAKNSQEV-EEHLIDSLYPLRFLPPFDSCADIGT 73
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G GFPG+I +I L +LIE K+ +FL Y V + + EA +
Sbjct: 74 GAGFPGLILAIALPK---SHFDLIEPLKKRVAFLHYCVMELGLSNVSIHAKRIEALTLEA 130
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D+I++RA+ TLL + P +
Sbjct: 131 P-DLITSRAVTSTQTLLSLARPLIAP 155
>gi|270308089|ref|YP_003330147.1| methyltransferase [Dehalococcoides sp. VS]
gi|270153981|gb|ACZ61819.1| methyltransferase [Dehalococcoides sp. VS]
Length = 235
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI 76
+S LE+ E +Y + ++ ++NL + + +D ++H DS+ + +
Sbjct: 12 GITLSFVQLEQFETYYRELVDYNSRVNLTAITEYKDVQVKHFLDSVSLVLVGIKGDEKIL 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA 135
D+GSG GFPG+ I I+ G L+E+ KKA FL + K ++ + R ++A
Sbjct: 72 DVGSGAGFPGLPLKILFPDIQLG---LLEATQKKARFLSEITAKLGLTGVEIISQRAEDA 128
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPW 163
Q ++++RA+AD+ TL E + P+
Sbjct: 129 AQNPLYRQKYTLVTSRAVADMATLAELTLPF 159
>gi|295132808|ref|YP_003583484.1| glucose-inhibited division protein B [Zunongwangia profunda SM-A87]
gi|294980823|gb|ADF51288.1| glucose-inhibited division protein B [Zunongwangia profunda SM-A87]
Length = 209
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 13 NYLLNTYN-VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ ++ +S E + E L+ W+ KIN+VS +++ ++RHV + Q
Sbjct: 2 ELIRKYFDGLSPEQITHFERLEDLYKDWNLKINVVSRKDIDELYLRHVLHSLGIAKVQKF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPGI +I +L++S KK + VV+ +
Sbjct: 62 NPGAHILDVGTGGGFPGIPMAILFPE---VSFHLVDSIGKKMKVVEEVVEGLGLQN--VK 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D I +RA+A + T + ++ + +K
Sbjct: 117 TTNDRVENIDGHYDFIISRAVAAMPTFVRWTKGKIAKK 154
>gi|260063673|ref|YP_003196753.1| glucose-inhibited division protein B [Robiginitalea biformata
HTCC2501]
gi|88783118|gb|EAR14291.1| glucose-inhibited division protein B [Robiginitalea biformata
HTCC2501]
Length = 212
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYP 72
N N+S ++ L+ W++KIN+VS +++ ++RHV +
Sbjct: 7 FQNFPNLSDTQKDQFLRIGDLYADWNRKINVVSRKDIDELYLRHVLHSLGIARVHSFLPG 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +D+G+GGGFPGI +I ++ L+++ KK + V++ + R
Sbjct: 67 TEVLDVGTGGGFPGIPLAILFPQVQ---FTLVDAIGKKIRVVNDVIEGLGLENA--SARQ 121
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSF 161
A M + D + +RA+A + T + ++
Sbjct: 122 VRAEAMKGSFDFVVSRAVAAMPTFVLWTR 150
>gi|239813065|ref|YP_002941975.1| 16S rRNA methyltransferase GidB [Variovorax paradoxus S110]
gi|239799642|gb|ACS16709.1| methyltransferase GidB [Variovorax paradoxus S110]
Length = 213
Score = 93.6 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPSIWI 76
+S E+L + L LKW+K NL + H+ DSL + +
Sbjct: 19 LSDAQAEQLLAYGTLMLKWNKVYNLTALRDPASVLTHHLLDSLAAVAPLQREWAGKGKLL 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+GSGGG PG++ ++ +E V+ +++ KKA+F++ V +
Sbjct: 79 DVGSGGGLPGVVIAVLRPDLE---VSCLDAVAKKAAFVQQVAAELELPN--LRGLHARVE 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + +VIS+RA A L S L
Sbjct: 134 SLTGSYEVISSRAFASLPDFFNGSRHLLAP 163
>gi|193806486|sp|Q46J33|RSMG_PROMT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 248
Score = 93.6 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWID 77
S + L + + L +W+KKINL +DFW V DSL +ID
Sbjct: 24 SEKQLAQFIHLQELLKEWNKKINLTRLVDGDDFWTAQVCDSLLPLYEELQHPEVSHKYID 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEA 135
+GSG GFPGI +I + + + L++S +KK +FL+ V ++ R KV R +EA
Sbjct: 84 IGSGCGFPGIAIAIAMPNSN---ITLLDSSSKKTTFLKEVSKEIGLDSRIKVVTERAEEA 140
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
P + D ARA+A + + EY P+L
Sbjct: 141 GRNPIFRSNFDYAIARAVASANVVAEYLVPFL 172
>gi|33241078|ref|NP_876020.1| phosphoribulokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|55976488|sp|Q7VA38|RSMG_PROMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33238607|gb|AAQ00673.1| Phosphoribulokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 253
Score = 93.6 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWID 77
S + LE+ +L +W++KINL DFWI + DSL Q ID
Sbjct: 23 SPQQLEQFNQLQYLLREWNQKINLTRLIEGNDFWISQILDSLWPIQDELKFQDKQINIID 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQ-- 133
+G+G G PG+ +I L LI+S +K S ++ +V++ R V RI+
Sbjct: 83 VGTGCGLPGLAVAIALPR---SSTTLIDSIYRKTSAVKEIVKELGLLSRVNVLTERIELT 139
Query: 134 -EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T D+ ARA+A L EY P+L
Sbjct: 140 GQKKLHRHTFDLAIARAVAKAPVLAEYLIPFLKP 173
>gi|283780179|ref|YP_003370934.1| methyltransferase GidB [Pirellula staleyi DSM 6068]
gi|283438632|gb|ADB17074.1| methyltransferase GidB [Pirellula staleyi DSM 6068]
Length = 255
Score = 93.2 bits (230), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N +R ++ + T++KL+ + L +W++KINL + E F R V D++ +
Sbjct: 42 NDTMRDALARHSIQLPDATIDKLDLYCKLLWEWNEKINLTRHTDYERFVSRDVVDTMHLA 101
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+L +D+GSGGG PGI +I ++ L ++ KK + LR +V+K
Sbjct: 102 KLLRESEEVLDVGSGGGVPGITLAIVRPDLQM---TLSDNTGKKVNVLRDMVEKLGLECA 158
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R ++ D ++ RA+ LD LL + P+
Sbjct: 159 ALNFRSEDLLD-ENRFDALTIRAVGPLDRLLTWFKPY 194
>gi|169825319|ref|YP_001692930.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302380961|ref|ZP_07269422.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
gi|193806443|sp|B0S3V0|RSMG_FINM2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167832124|dbj|BAG09040.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302311182|gb|EFK93202.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
Length = 230
Score = 93.2 bits (230), Expect = 9e-18, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYPSIW 75
+ ++ L + L L+ +K +NL + + E F ++H DS +
Sbjct: 11 DIQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVLNLFDFEENKTI 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFP I I + ++ L++S K+ FL+ V+ + K R +E
Sbjct: 71 IDVGTGAGFPAIPIKIARNDLK---FTLLDSLRKRVDFLKDVIDELHLTDIKAVHERAEE 127
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA++ LDTL E+ P++
Sbjct: 128 CTRTAEYREQYDYCISRAVSKLDTLAEFCLPFVK 161
>gi|258544325|ref|ZP_05704559.1| glucose-inhibited division protein B [Cardiobacterium hominis ATCC
15826]
gi|258520405|gb|EEV89264.1| glucose-inhibited division protein B [Cardiobacterium hominis ATCC
15826]
Length = 209
Score = 93.2 bits (230), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
+ V + + L KW++ NL + VE+ RHV D L V + D+
Sbjct: 19 FAVDAAQRAQFARYLDLLNKWNQVHNLTAVRDVEEQVSRHVLDCLAVLPYIEDAATLADI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
GSG G P ++ +I S + V +ES KKA+F+R V+ A +V A R+++
Sbjct: 79 GSGAGLPALMLAIMRSQL---AVTALESNGKKAAFIREAVRVLALANVQVVAQRVEDWQA 135
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
VI +RALA D + +
Sbjct: 136 PPQA--VIISRALAAADRFIALTAHL 159
>gi|147669346|ref|YP_001214164.1| methyltransferase GidB [Dehalococcoides sp. BAV1]
gi|146270294|gb|ABQ17286.1| 16S rRNA m(7)G-527 methyltransferase [Dehalococcoides sp. BAV1]
Length = 256
Score = 93.2 bits (230), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N ++ L +++ L + E +Y + ++ +INL + + +D I+H DS+ +
Sbjct: 22 MNELVYGLSAL-GISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSL 80
Query: 66 F-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+GSG GFPG+ I +I+ G L+E+ KKA FL + K
Sbjct: 81 VLAGIKGDEKLLDVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLS 137
Query: 125 -GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
++ + R ++ Q ++++RA+AD+ TL E + P+
Sbjct: 138 GVEIISQRAEDTAQNPLYRQKYSLVTSRAVADMATLAELTLPF 180
>gi|78186097|ref|YP_374140.1| 16S rRNA methyltransferase GidB [Chlorobium luteolum DSM 273]
gi|123583570|sp|Q3B6D4|RSMG_PELLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78165999|gb|ABB23097.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium luteolum DSM 273]
Length = 238
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVF 66
+L + + ++KL Y+ L +W+ KINL+S ++HV S + +
Sbjct: 27 MLESLCASQGIALDPAQIDKLVYYGELLGEWNMKINLISRKEDAPVILKHVFHSLLISLH 86
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+DLG+GGG PGI +I + L+++ KK + + ++
Sbjct: 87 HPFTEGEKVLDLGTGGGLPGIPLAIAFPKTD---FLLVDATGKKITACQGMITALGLKNA 143
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E + D + +R +A L L Y+ P L +
Sbjct: 144 TALHSRVEELKGL--AFDTVLSRQVAPLADLARYARPLLKK 182
>gi|83746958|ref|ZP_00944004.1| Methyltransferase gidB [Ralstonia solanacearum UW551]
gi|207744822|ref|YP_002261214.1| methyltransferase gidb (glucose inhibited divisionprotein b)
[Ralstonia solanacearum IPO1609]
gi|83726378|gb|EAP73510.1| Methyltransferase gidB [Ralstonia solanacearum UW551]
gi|206596232|emb|CAQ63159.1| methyltransferase gidb (glucose inhibited divisionprotein b)
[Ralstonia solanacearum IPO1609]
Length = 225
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--------SLRVFQLH 69
++ L++L + L KW++ NL + D H+ D + RV +
Sbjct: 23 GLSLDAAQLDRLLAYQALLGKWNRVYNLTAIRDAGDMLTHHLLDSLAAVPRIAERVRRAQ 82
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
P +D+GSGGG PGI +I I V +++ KK +FL + +
Sbjct: 83 PEAPRVLDVGSGGGLPGIPLAIACPDIG---VTMVDIVQKKTAFLTQCRAELGLGNAQSH 139
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+++ T VI++RA A+L+ + + L
Sbjct: 140 WGHVEKLAD-ATGYGVITSRAFAELNDFVRLAGHLLAP 176
>gi|224539434|ref|ZP_03679973.1| hypothetical protein BACCELL_04339 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518939|gb|EEF88044.1| hypothetical protein BACCELL_04339 [Bacteroides cellulosilyticus
DSM 14838]
Length = 206
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ ++ Y L+ W+ KIN++S +E+ + HV +
Sbjct: 2 EIILKYFPDLTEAQKQQFASLYDLYTDWNAKINVISRKDIENLYEHHVLHSLGIAKVIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ LV+ I K + A+ + +
Sbjct: 62 TPGTRIMDLGTGGGFPGIPLAILFPEVKFHLVDSIGKKVRVATEVANSIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R +E Q+ D + +RA+ L LL+
Sbjct: 120 ARAEEEKQL---FDFVVSRAVMPLADLLKI 146
>gi|218779527|ref|YP_002430845.1| methyltransferase GidB [Desulfatibacillum alkenivorans AK-01]
gi|218760911|gb|ACL03377.1| methyltransferase GidB [Desulfatibacillum alkenivorans AK-01]
Length = 223
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LEK F L + + ++NL S D ++H DSL P + D+GSG GFP
Sbjct: 31 LEKCAAFARLLAQANNRVNLSSIRDPRDMAVKHFADSLAPIPYIPEGAKVADIGSGAGFP 90
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITT--- 141
G++ +I ++ + IE+ KKA+F R+ + K++ R +
Sbjct: 91 GLVLAIFRPDLQ---LTSIETIRKKANFQRHAALELGLSNVKIYNIRAENWKTEGDKGLL 147
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
D + RAL+DL +L ++ P L K
Sbjct: 148 FDAVVCRALSDLSAILSWARPMLAPK 173
>gi|91777102|ref|YP_546858.1| methyltransferase GidB [Methylobacillus flagellatus KT]
gi|123253820|sp|Q1GXM0|RSMG_METFK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91711089|gb|ABE51017.1| 16S rRNA m(7)G-527 methyltransferase [Methylobacillus flagellatus
KT]
Length = 205
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L ++ E EKL + L KW+K NL + ED H+ DSL V
Sbjct: 1 MQQKLETGIRQLGLDLPAEVTEKLLAYLALLAKWNKVHNLTAVRDPEDMVTLHLLDSLSV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P +D+GSG G PGI+ +I ++ V I++ KKASF+R +
Sbjct: 61 LPHVP-SGSLLDVGSGAGLPGIVLAICRPDLQ---VTTIDAVQKKASFMRQAKAELQIDN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + D + +RA +++ ++ + + +
Sbjct: 117 LQVVAGRVEQFEPEAPFDTVISRAFSEIALFVKLTRHLMAE 157
>gi|189045877|sp|B0UWH2|RSMG_HAES2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ + N+LL + + E+L L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MEKLNFLLKNTALLPTNLQKERLVQLVLLLNKWNKAYNLTSVRDPMEMLVKHILDSI-VV 59
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ +I+ID+G+G G PG+ +I + L++S K+ SF+R V++
Sbjct: 60 SPYLQGNIFIDVGTGPGLPGLPLAIINPDKKFF---LLDSLGKRISFIRNAVRELELTNV 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++E D + +RA A L + E+ L +
Sbjct: 117 EPVLSRVEEFKP-DHQFDGVLSRAFASLKDMTEWCQHLLTDQ 157
>gi|254884549|ref|ZP_05257259.1| glucose-inhibited division protein B [Bacteroides sp. 4_3_47FAA]
gi|319640759|ref|ZP_07995472.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_1_40A]
gi|254837342|gb|EET17651.1| glucose-inhibited division protein B [Bacteroides sp. 4_3_47FAA]
gi|317387571|gb|EFV68437.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_1_40A]
Length = 209
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + N+S + + Y L+ W+ KIN++S + + + HV +
Sbjct: 2 ELILKYFPNLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ L++S KK + + F
Sbjct: 62 TPDTQIMDLGTGGGFPGIPLAILFPEVQFH---LVDSIGKKVKVATEIANAIGLKNVTFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
E + D + +RA+ L L++ + Q++
Sbjct: 119 HCRAEEEK--RKFDFVVSRAVMPLGDLIKIIRKNIRQEQ 155
>gi|150005537|ref|YP_001300281.1| 16S rRNA methyltransferase GidB [Bacteroides vulgatus ATCC 8482]
gi|294778738|ref|ZP_06744157.1| 16S rRNA methyltransferase GidB [Bacteroides vulgatus PC510]
gi|166224575|sp|A6L4P5|RSMG_BACV8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149933961|gb|ABR40659.1| glucose-inhibited division protein [Bacteroides vulgatus ATCC 8482]
gi|294447394|gb|EFG15975.1| 16S rRNA methyltransferase GidB [Bacteroides vulgatus PC510]
Length = 209
Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + N+S + + Y L+ W+ KIN++S + + + HV +
Sbjct: 2 ELILKYFPNLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ L++S KK + + F
Sbjct: 62 TPDTQIMDLGTGGGFPGIPLAILFPEVQFH---LVDSIGKKVKVATEIANAIGLKNVTFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
E + D + +RA+ L L++ + Q++
Sbjct: 119 HCRAEEEK--RKFDFVVSRAVMPLGDLIKIIRKNIRQEQ 155
>gi|167626953|ref|YP_001677453.1| 16S rRNA methyltransferase GidB [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189039392|sp|B0TW44|RSMG_FRAP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167596954|gb|ABZ86952.1| methyltransferase GidB [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 204
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 6/164 (3%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+R + + E +E+ + L KW+K N+ + ++D ++H+ DS
Sbjct: 1 MDSMKDKIRQALVELDIQATEEQIEQWLEYLKLLEKWNKVYNMTAIKKIDDMLVKHLFDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G+GGG PG++ +I + L++S KK FL+ V +
Sbjct: 61 LAVAKYIKGS-STVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLG 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D I +RA + +DT E +L +
Sbjct: 117 LDN--INPLNIRIENLNGSFDNIISRAFSSVDTFYELCKHFLTK 158
>gi|303234724|ref|ZP_07321352.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
gi|302494207|gb|EFL53985.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
Length = 230
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYPSIW 75
+ ++ L + L L+ +K +NL + + E F ++H DS +
Sbjct: 11 DIQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVLNLFDFEENKTI 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFP I I + ++ L++S K+ FL+ V+ + K R +E
Sbjct: 71 IDVGTGAGFPAIPIKIARNDLK---FTLLDSLRKRVDFLKDVIDELHLTEIKAVHERAEE 127
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA++ LDTL E+ P++
Sbjct: 128 CTRTAEYRERYDYCISRAVSKLDTLAEFCLPFVK 161
>gi|325478845|gb|EGC81955.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 212
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + + L+ + NL + + I+H +DSL + +D+G+G G
Sbjct: 2 EKSKAYKIYMDYLLEVNSHTNLTAIIDPSEIEIKHFKDSLTILDYIKEGDKVLDIGAGAG 61
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMITT 141
FPGI I+ + + LI+S NKK F+ V++K + R ++ A
Sbjct: 62 FPGIPLRIE----KEIDLTLIDSVNKKVKFMNEVIEKLNLENARAIHVRAEDFAKDQREK 117
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
DV+ +RA+A++ TL EY P+L
Sbjct: 118 YDVVVSRAVANMRTLSEYCLPFLK 141
>gi|332971535|gb|EGK10485.1| glucose inhibited division protein B [Kingella kingae ATCC 23330]
Length = 216
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
KW+ NL + H+ DSL + +D+GSGGG PGI T+I +
Sbjct: 41 KKWNSTYNLTALRDENQMISHHILDSLTLLPYVQNAQSMMDVGSGGGMPGIPTAICRPDL 100
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
+ + L+++ KK +FL+ + + A EA DV+++RA A+L
Sbjct: 101 Q---ITLLDANTKKTTFLQQAAIELGLKNVTVASGRVEA-MHDKKVDVVTSRAFAELHDF 156
Query: 157 LEYSFPWLYQK 167
+ + L ++
Sbjct: 157 VALTKHLLNEQ 167
>gi|113461840|ref|YP_719909.1| 16S rRNA methyltransferase GidB [Haemophilus somnus 129PT]
gi|123327493|sp|Q0I5W5|RSMG_HAES1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|112823883|gb|ABI25972.1| 16S rRNA m(7)G-527 methyltransferase [Haemophilus somnus 129PT]
Length = 212
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ + N+LL + + E+L L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MEKLNFLLKNTALLPTNLQKERLVQLVLLLNKWNKAYNLTSVRDPMEMLVKHILDSI-VV 59
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ +I+ID+G+G G PG+ +I + L++S K+ SF+R V++
Sbjct: 60 SPYLQGNIFIDVGTGPGLPGLPLAIINPDKKFF---LLDSLGKRISFIRNAVRELELTNV 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++E D + +RA A L + E+ L +
Sbjct: 117 EPVLSRVEEFKP-DHQFDGVLSRAFASLKDMTEWCQHLLTDQ 157
>gi|269123846|ref|YP_003306423.1| methyltransferase GidB [Streptobacillus moniliformis DSM 12112]
gi|268315172|gb|ACZ01546.1| methyltransferase GidB [Streptobacillus moniliformis DSM 12112]
Length = 231
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L+ + S + L+KL + + ++ +K +NL + +D +H D+L +
Sbjct: 1 MKEYFINLLKLSNIDTSEDKLDKLIIYLEMLIEKNKVMNLTAIRDGKDMIEKHFIDALLL 60
Query: 66 FQLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
++ IDLG+G GFPG++ ++ L++S KK +FL V+++ +
Sbjct: 61 TKIIRSEEKTLIDLGTGAGFPGLVLAVYYPDKN---FLLVDSVKKKVAFLDEVIERLKLK 117
Query: 125 GKVFACRIQE--APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ E + D+ R +A+L +LEY P++
Sbjct: 118 NVKTSSERAEEIVKKYREKFDLALCRGVANLRIILEYMIPFIK 160
>gi|297588069|ref|ZP_06946713.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
gi|297574758|gb|EFH93478.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
Length = 230
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYPSIW 75
+ ++ L + L L+ +K +NL + + E F ++H DS +
Sbjct: 11 EIQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVLNLFDFEENKTI 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFP I I + ++ L++S K+ FLR V+ + K R +E
Sbjct: 71 IDVGTGAGFPAIPIKIARNDLK---FTLLDSLRKRVDFLRDVIDELQLTDIKAVHERAEE 127
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA++ L+TL E+ P++
Sbjct: 128 CTRTAEYRERYDYCISRAVSKLNTLAEFCLPFVK 161
>gi|28209871|ref|NP_780815.1| 16S rRNA methyltransferase GidB [Clostridium tetani E88]
gi|38257542|sp|Q899S0|RSMG_CLOTE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28202306|gb|AAO34752.1| glucose inhibited division protein B [Clostridium tetani E88]
Length = 239
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MKY D IL + + + +W+KKINL + + ED +H
Sbjct: 1 MKYYD---ILNSACNDVGIGFDENKYNAFIKYKSMIQEWNKKINLTAITEDEDIIKKHFI 57
Query: 61 DSLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D +++++ + + +D+G+G GFPGI I E V L++S NK+ FL V
Sbjct: 58 DCIKIYKFDKFKKLNKIMDVGTGAGFPGIPIKILEEEKE---VILLDSLNKRIKFLDEVS 114
Query: 119 QKTAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ K R ++ + D + +RA+A++ L E+ P++
Sbjct: 115 KELKLENIKNLHGRAEDYAQKEEFREQFDGVVSRAVANISVLSEFCLPYIR 165
>gi|288800185|ref|ZP_06405644.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 299 str.
F0039]
gi|288333433|gb|EFC71912.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 299 str.
F0039]
Length = 206
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLH 69
N +L + +++ + +E+ + L+ W++KIN++S + + + HV SL +
Sbjct: 2 NEILEYFPHLTDKQIEQFKALQALYEDWNQKINVISRKDISNLYSHHVLHSLAIAKAINF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D G+GGGFPGI +I + + L++ K A+ + + T +
Sbjct: 62 KDGTTIMDFGTGGGFPGIPLAIMFPNCKFKLIDGTGKKIMVANEVIKAIGITNVVAEHIR 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ + I +RA+ L L+ + +K+
Sbjct: 122 G-----EEEKGKYNFIVSRAVMPLPDLINIVKKNISKKQ 155
>gi|261880786|ref|ZP_06007213.1| glucose-inhibited division protein B [Prevotella bergensis DSM
17361]
gi|270332564|gb|EFA43350.1| glucose-inhibited division protein B [Prevotella bergensis DSM
17361]
Length = 212
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + N + +++ E+ L+ +W+ KIN++S +++ ++ HV SL + ++
Sbjct: 1 MDKLDIFNYFPDLTPRQKEQFGALDALYHEWNAKINVISRKDIDNLYLHHVLHSLAIAKV 60
Query: 69 HPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G+GGGFPGI +I L++ I K + A+ + + + +
Sbjct: 61 VSFRPGTTILDIGTGGGFPGIPLAIMFPECRFRLIDSIGKKVRVATEVAHAIG--LDNTE 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEY 159
F R +E D + +RA+ + L++
Sbjct: 119 AFHRRGEEEKD---KFDFVVSRAVMPMPDLVKI 148
>gi|325983681|ref|YP_004296083.1| methyltransferase GidB [Nitrosomonas sp. AL212]
gi|325533200|gb|ADZ27921.1| methyltransferase GidB [Nitrosomonas sp. AL212]
Length = 224
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 23 RETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
E L K +E + L KW+K NL + V++ +HV DS V H ID+G+G
Sbjct: 22 EEQLAKNIERYLVLIEKWNKVHNLTAIRNVQEMLTQHVMDS-LVVLPHIQGPQVIDVGTG 80
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PGI ++ V L+ES KK +FL+ V + + A + E
Sbjct: 81 AGLPGIPIALAKPDW---HVTLVESNQKKIAFLQQVKIELGLKNVDVAAKRIEDLPADKK 137
Query: 142 CDVISARALADLDTLLEYSFPW 163
D I +RA ++L + + W
Sbjct: 138 ADTIISRAFSELGEFIALTRQW 159
>gi|86141319|ref|ZP_01059865.1| glucose-inhibited division protein B [Leeuwenhoekiella blandensis
MED217]
gi|85831878|gb|EAQ50333.1| glucose-inhibited division protein B [Leeuwenhoekiella blandensis
MED217]
Length = 209
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 7/150 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++S L + E L+ W+ KIN+VS +++ ++RHV + Q + +D
Sbjct: 10 DLSDTQLNQFEKLNDLYQDWNLKINVVSRKDIDEIYLRHVLHSLGIAKVQKFNRGASILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGGFPGI +I + L++S KK + V
Sbjct: 70 VGTGGGFPGIPLAILFPETQFH---LVDSIGKKIKVVEEVSAGLGLSNVKITN--DRVEN 124
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D I +RA+A ++T + + + +K
Sbjct: 125 IDGQYDFIVSRAVAQMETFVRWIKGRIAKK 154
>gi|160895497|ref|YP_001561079.1| 16S rRNA methyltransferase GidB [Delftia acidovorans SPH-1]
gi|160361081|gb|ABX32694.1| methyltransferase GidB [Delftia acidovorans SPH-1]
Length = 219
Score = 92.8 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 15/154 (9%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----------LRVFQ 67
+++ ++ L F L KW+K NL + ++ H+ DS L
Sbjct: 17 GLDLTPAQIDTLMEFQALLGKWNKVYNLTAVRDPQEMLTHHLLDSLAAVPALQRHLAQMP 76
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +D+GSGGG PG++ +I I+ V+ +++ KKA+F++
Sbjct: 77 AREGRTAMLDVGSGGGLPGVVFAICCPQID---VHCVDTVGKKAAFIQQAAATLRLPN-- 131
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
Q+ T +IS RA A L +S
Sbjct: 132 LRGIHSRVEQLTTRYPLISCRAFASLADFTSWSR 165
>gi|254496642|ref|ZP_05109505.1| glucose inhibited division protein B [Legionella drancourtii
LLAP12]
gi|254354070|gb|EET12742.1| glucose inhibited division protein B [Legionella drancourtii
LLAP12]
Length = 209
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 4/139 (2%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + FL KW+ NL + +E +H+ DSL + ID+G+G G PGI
Sbjct: 26 QLSNYLFLLKKWNAAYNLTAVRDLESMISKHLLDSLAILPWVNGRH-IIDVGTGPGLPGI 84
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+I L++S KK FL V ++ + E D + +
Sbjct: 85 PLAIAKPEQN---FVLLDSNGKKTRFLNEVKRQLHLKNLEVVHFRVENYHPTQGFDTVVS 141
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA + L +++++ +
Sbjct: 142 RAFSSLAQMVQWTEHLIAN 160
>gi|326404880|ref|YP_004284962.1| ribosomal RNA small subunit methyltransferase G [Acidiphilium
multivorum AIU301]
gi|325051742|dbj|BAJ82080.1| ribosomal RNA small subunit methyltransferase G [Acidiphilium
multivorum AIU301]
Length = 217
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDSLRV-FQLHPYPSIWID 77
VSRETL +LE F L L+W+ +INLVS + W RH+ DSL++ + D
Sbjct: 24 VSRETLSRLEAFAALILRWTARINLVSRKDAAPAEIWSRHILDSLQMLPLVPQGAFRAAD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LGSGGG PG++ +I I LIES +KA+FL+ + + V + RI++A
Sbjct: 84 LGSGGGLPGLVLAIARPEIG---FTLIESDRRKAAFLQTAIAELKLNATVLSVRIEQAR- 139
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +++ARALA L L Y+ P L
Sbjct: 140 -LEPSPLVTARALAALPVLFGYAAPLLAP 167
>gi|329847388|ref|ZP_08262416.1| 16S rRNA methyltransferase GidB [Asticcacaulis biprosthecum C19]
gi|328842451|gb|EGF92020.1| 16S rRNA methyltransferase GidB [Asticcacaulis biprosthecum C19]
Length = 213
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
++V +E ++ L F + ++ +NLV T+ +W RHV DS ++ L P W DL
Sbjct: 12 FHVKQEAVDDLTAFGAMVADKNEVMNLVGPLTLPHYWSRHVLDSAQLLNLRPNAQTWADL 71
Query: 79 GSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+G GFPG++ +I L + V LI+S K+ FL VV + A V A
Sbjct: 72 GAGAGFPGVVLAILLKHTADAPNVYLIDSLAKRCRFLEAVVAELALPAVVIND---RAEN 128
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV++ARA A + LL ++ +++
Sbjct: 129 LNLRVDVVTARACAPMTRLLGFAERFIHN 157
>gi|227494183|ref|ZP_03924499.1| glucose-inhibited division protein B [Actinomyces coleocanis DSM
15436]
gi|226831917|gb|EEH64300.1| glucose-inhibited division protein B [Actinomyces coleocanis DSM
15436]
Length = 223
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ +++S + +F + + + L+ + W RH+ +S + + P +
Sbjct: 24 IELFDLS---YSAMSHFAQMLVDEGELRGLIGPRELPRLWSRHLVNSAAIVEFIPQRAQM 80
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSG GFPG++ +I ++ V+L+E ++ +L VV + + E
Sbjct: 81 LDVGSGAGFPGMVAAIMRPDVD---VHLVEPMLRRVEWLEDVVAELGLDNVTVHHKRAEE 137
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
DV+++RA+A+L L+ P +
Sbjct: 138 LHGQGKADVVTSRAVANLKKLMPICMPLVR 167
>gi|51894468|ref|YP_077159.1| glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
gi|81610303|sp|Q67J35|RSMG_SYMTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51858157|dbj|BAD42315.1| Glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
Length = 246
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLGSGGGFPGIIT 89
L +W++++NL + + ++ I+H D+ ID+G+G GFPG++
Sbjct: 32 HLDLVREWNERMNLTAITDPQEMVIKHALDAASGLAVAGVEPGQRVIDVGTGAGFPGVVW 91
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK---VFACRIQEA---PQMITTCD 143
I+ L+ ++ + + + V A G+ V R ++ P D
Sbjct: 92 KCLRPGIDLTLLESLQKRCRFLEEVGQAVIGPLAGGEGYQVVWGRAEDVGRNPAHRERYD 151
Query: 144 VISARALADLDTLLEYSFPWLY 165
+++ARA+A+L L EY P
Sbjct: 152 LVTARAVAELRVLAEYCLPLAR 173
>gi|313674430|ref|YP_004052426.1| 16S rRNA m(7)g-527 methyltransferase [Marivirga tractuosa DSM 4126]
gi|312941128|gb|ADR20318.1| 16S rRNA m(7)G-527 methyltransferase [Marivirga tractuosa DSM 4126]
Length = 207
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
DS++I+ + +S + + + L+ +W++KIN++S +E+ + +H+ +L
Sbjct: 1 MDSSAIVEKYFPQ----LSAQQKAQFQELGNLYAEWNEKINVISRKDIENIYEKHILHAL 56
Query: 64 RV-FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+G+GGGFPGI +I + L++S KK ++ V +
Sbjct: 57 AIAKFQNLSGKKILDVGTGGGFPGIPLAILFPDAQ---FTLVDSIGKKIKVVKAVAESLG 113
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
Q A + D + +RA+ + + L +
Sbjct: 114 LEN--VEAYHQRAEKTKGKFDFVVSRAVTRMKSFLHW 148
>gi|34541002|ref|NP_905481.1| 16S rRNA methyltransferase GidB [Porphyromonas gingivalis W83]
gi|55976476|sp|Q7MV10|RSMG_PORGI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|34397317|gb|AAQ66380.1| glucose-inhibited division protein B [Porphyromonas gingivalis W83]
Length = 221
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 10/160 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ + ++S E+ E L+ W+ IN++S +++ ++ HV +
Sbjct: 16 EIIEKYFPHLSERQREQFEQMGGLYTHWNALINVISRKDIDNLYLHHVLHSLGIARMLNF 75
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ +DLG+GGGFPGI +I L++S KK V + +
Sbjct: 76 KPGTSVLDLGTGGGFPGIPLAILFP---QVSFLLVDSIGKKVKVASAVAEALGLDNVRTM 132
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
CR + D I +RA+ L L + + ++
Sbjct: 133 HCRAESIG---EKFDFIVSRAVMKLSELAKICRKLIRRED 169
>gi|319902422|ref|YP_004162150.1| 16S rRNA m(7)G-527 methyltransferase [Bacteroides helcogenes P
36-108]
gi|319417453|gb|ADV44564.1| 16S rRNA m(7)G-527 methyltransferase [Bacteroides helcogenes P
36-108]
Length = 207
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 8/159 (5%)
Query: 13 NYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + V + E ++ Y L+L W+ KIN++S +++ + HV +
Sbjct: 2 ELILKYFPVLTEEQKKQYAALYDLYLDWNSKINVISRKDIDNLYEHHVLHSLGIAQVIRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ LI+S KK V + F
Sbjct: 62 KPGTRIMDLGTGGGFPGIPLAILFPEVQFH---LIDSIGKKIRVAEEVAGSIGLKNTTFR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
E + D + +RA+ L L++ + K+
Sbjct: 119 HARAEEEKQT--FDFVVSRAVMPLSDLMKIIRKNISPKQ 155
>gi|148261391|ref|YP_001235518.1| methyltransferase GidB [Acidiphilium cryptum JF-5]
gi|189039374|sp|A5G167|RSMG_ACICJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146403072|gb|ABQ31599.1| 16S rRNA m(7)G-527 methyltransferase [Acidiphilium cryptum JF-5]
Length = 217
Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDSLRV-FQLHPYPSIWID 77
VSRETL +LE F L L+W+ +INLVS + W RH+ DSL++ + D
Sbjct: 24 VSRETLSRLEAFAALILRWTARINLVSRKDAAPAEIWNRHILDSLQMLPLVPQGAFRAAD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LGSGGG PG++ +I I LIES +KA+FL+ + + V RI++A
Sbjct: 84 LGSGGGLPGLVLAIARPEIG---FTLIESDRRKAAFLQTAIAELKLNATVLPVRIEQAR- 139
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +++ARALA L L Y+ P L
Sbjct: 140 -LEPSPLVTARALAALPVLFGYAAPLLAP 167
>gi|294668221|ref|ZP_06733328.1| 16S rRNA methyltransferase GidB [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309929|gb|EFE51172.1| 16S rRNA methyltransferase GidB [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 209
Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
KW+ NL + + H+ DSL + S +D+GSGGG PGI +I +
Sbjct: 34 KKWNGTYNLTALRDEQTMISHHILDSLTLLPYIEQASTLMDVGSGGGMPGIPAAICRPDL 93
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
+ + L+++ KK +FLR V + A E DV+++RA A+L
Sbjct: 94 Q---ITLLDANTKKTTFLRQAVIELGLNNVTVASGRVE-EMHDKKVDVVTSRAFAELKDF 149
Query: 157 LEYSFPWLYQK 167
+ + L ++
Sbjct: 150 ISLTAHLLNEQ 160
>gi|186685535|ref|YP_001868731.1| 16S rRNA methyltransferase GidB [Nostoc punctiforme PCC 73102]
gi|238689423|sp|B2J5Q6|RSMG_NOSP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|186467987|gb|ACC83788.1| methyltransferase GidB [Nostoc punctiforme PCC 73102]
Length = 244
Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED------SLRVFQLHPYPSIWID 77
+ E+ + Y L L+ ++++NL + ++FW +H+ D L L P ID
Sbjct: 23 QQQEQFQRLYELILEGNRQLNLTRITDPQEFWEKHLWDSLRGILPLLSGNLPPASPTIID 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACRIQ 133
+G+G GFPG+ ++ + + + L++S KK +FL ++ + A A +I
Sbjct: 83 IGTGAGFPGVPVAMTVPN---CTITLLDSTQKKITFLDNILTELALTNTKTIVGRAEKIG 139
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ PQ D+ RA+ + EY+ P L Q
Sbjct: 140 QHPQHRMAYDIALIRAVGAVSVCAEYTLPLLKQ 172
>gi|325297809|ref|YP_004257726.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
salanitronis DSM 18170]
gi|324317362|gb|ADY35253.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
salanitronis DSM 18170]
Length = 210
Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ + N + +++ E+ + L+ W+ KIN++S + + + H+ +
Sbjct: 5 DIIQNYFPDLTDTQKEQFAALWDLYTYWNSKINVISRKDIGNLYEHHILHSLGIAKVIHF 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I + LV+ I K K A+ + ++
Sbjct: 65 RPGTEVMDLGTGGGFPGIPLAILFPEVSFHLVDSIGKKVKVATEVANAIE--LKNVTARH 122
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
CR +E +M D + +RA+ L L++ + +++
Sbjct: 123 CRAEEEKRM---FDFVVSRAVMPLPDLIKIVRKNIKKEE 158
>gi|227500995|ref|ZP_03931044.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
gi|227216768|gb|EEI82166.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
Length = 210
Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L+ + NL + + + I+H +DSL V +D+G+G GFPG+
Sbjct: 6 QIYMDYLLEVNAHTNLTAITNPREIEIKHFKDSLTVLSYIKEKDKVLDIGAGAGFPGLPL 65
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA-PQMITTCDVISA 147
I+ + + LI+S NKK F+ V++K + R ++ + + DV+ +
Sbjct: 66 RIE----KDFDLTLIDSVNKKVVFMNEVIEKLGLKNTRAIHTRAEDYAREKRESFDVVVS 121
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A++ TL EY+ P+L
Sbjct: 122 RAVANMATLSEYALPFLK 139
>gi|149279363|ref|ZP_01885494.1| glucose-inhibited division protein B [Pedobacter sp. BAL39]
gi|149229889|gb|EDM35277.1| glucose-inhibited division protein B [Pedobacter sp. BAL39]
Length = 210
Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
+ ++ + + +++ + LE+ Y L+ W+ +IN++S +++ +IRHV + F
Sbjct: 3 INSSLIQKYFKDLTAQQLEQFGQLYELYSFWNAQINVISRKDIDELYIRHVLHSLGIAKF 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+G+GGGFPGI +I + L++S KK + V
Sbjct: 63 CSFKPGETVLDVGTGGGFPGIPLAILFPETQFH---LVDSIGKKIKVVTEVAAGLGLNN- 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q++ D + +RA+ L +PW+ K
Sbjct: 119 -VKASHLRAEQVMEKYDFVVSRAVTRLIDF----YPWVKGK 154
>gi|300778447|ref|ZP_07088305.1| 16S rRNA methyltransferase GidB [Chryseobacterium gleum ATCC 35910]
gi|300503957|gb|EFK35097.1| 16S rRNA methyltransferase GidB [Chryseobacterium gleum ATCC 35910]
Length = 211
Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
+ A+ LL + +++ + E+ L+ +W++KIN++S +E + +H+ +
Sbjct: 1 MSASLLLKYFPDLTEKQKEQFSQLENLYNEWNEKINVISRKDMESLYEKHILHSLGIAKV 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ +D+G+GGGFPGI +I +E LI+S KK S ++ V
Sbjct: 61 MAFAPGTKVLDIGTGGGFPGIPLAILFPEVE---FTLIDSIGKKISVVQAVADGVGLTNV 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
A ++ + +RA+ + L +
Sbjct: 118 TAIHG---RAEKLKEKFHFVVSRAVTQMPEFLRW 148
>gi|189462108|ref|ZP_03010893.1| hypothetical protein BACCOP_02788 [Bacteroides coprocola DSM 17136]
gi|189431189|gb|EDV00174.1| hypothetical protein BACCOP_02788 [Bacteroides coprocola DSM 17136]
Length = 208
Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + +++ E+ Y L+ W+ KIN++S + + + HV + F
Sbjct: 2 DIILKYFPDLTETQKEQFGALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKFIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I LV+ I K + A+ + +
Sbjct: 62 KPGTRIMDLGTGGGFPGIPLAILFPDSTFHLVDSIGKKVRVATEIANAIG--LKNVTTRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
CR +E QM D + +RA+ L LL+ + +++
Sbjct: 120 CRAEEEKQM---FDFVVSRAVMPLTDLLKIIRKNISKEQ 155
>gi|83319743|ref|YP_424755.1| 16S rRNA methyltransferase GidB [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|3122152|sp|Q48960|RSMG_MYCCT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|950065|emb|CAA83698.1| methyltransferases [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|83283629|gb|ABC01561.1| methyltransferase gidB [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 231
Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIW 75
+ +++E KL +Y + ++ ++K NL + + + + +H DSL Q
Sbjct: 12 KNFTINQEIKNKLNLYYQILIEENQKYNLTRITELNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
D+G+G GFPGI+ I +I+ + LIES NKK +FL+Y+VQK ++ R +E
Sbjct: 72 ADIGTGAGFPGIVLKIFFPNIK---LTLIESNNKKVNFLKYLVQKLNLNDVEILNKRAEE 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D++ +RA+A L+ +LE +
Sbjct: 129 LNEYKEQFDIVISRAVAYLNIILELGVQLVK 159
>gi|114332388|ref|YP_748610.1| methyltransferase GidB [Nitrosomonas eutropha C91]
gi|122312972|sp|Q0ADD7|RSMG_NITEC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114309402|gb|ABI60645.1| 16S rRNA m(7)G-527 methyltransferase [Nitrosomonas eutropha C91]
Length = 214
Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L KW+ NL S E RH+ DS V H +D+GSG G PGI
Sbjct: 27 RLLRYIELITKWNSTHNLTSVRNPESMITRHMLDS-LVVLPHISGPNIVDVGSGAGLPGI 85
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ + V ++ES KKA F++ VV + + E + D + +
Sbjct: 86 PIALARPEWQ---VVMVESNQKKAVFMQQVVVELRLQNVSIRQERVEKIKPGNKVDTVIS 142
Query: 148 RALADLDTLLEYSFPW 163
RA + L+ + S
Sbjct: 143 RAFSSLERFMRLSKHL 158
>gi|281420102|ref|ZP_06251101.1| 16S rRNA methyltransferase GidB [Prevotella copri DSM 18205]
gi|281405902|gb|EFB36582.1| 16S rRNA methyltransferase GidB [Prevotella copri DSM 18205]
Length = 253
Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 11/167 (6%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
Y I+ + N++ E ++ E L+ W+ KIN++S +++ + HV S
Sbjct: 43 YNYMIEIIEKYFP----NLTEEQKKQFEALDALYRDWNSKINVISRKDIDNLYEHHVLHS 98
Query: 63 LRV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + + +D G GGGFPGI +I + L++ K + + + +
Sbjct: 99 LAIAKAIHFRPGTEILDFGCGGGFPGIPLAILFPECKFKLIDGTGKKIRVCNEVATAINL 158
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + D + +RA+ L L++ QK
Sbjct: 159 QNLKAEHLRG-----EDEKGKYDFVVSRAVMQLPDLMKIIKKNFKQK 200
>gi|300702503|ref|YP_003744103.1| glucose-inhibited division protein b,
s-adenosyl-l-methionine-dependent methyltransferase
[Ralstonia solanacearum CFBP2957]
gi|299070164|emb|CBJ41455.1| Glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum CFBP2957]
Length = 226
Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--------SLRVFQLH 69
++ L++L + L KW++ NL + D H+ D + RV ++
Sbjct: 24 GLSLDAAQLDRLLAYQALLGKWNRVYNLTAIREAGDMLTHHLLDSLAAVPRIAERVRRVQ 83
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
P +D+GSGGG PGI +I I V +++ KK +FL + +
Sbjct: 84 PEAPRVLDVGSGGGLPGIPLAIACPDIG---VTMVDIVQKKTAFLTQCRAELGLGNAQSH 140
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+++ T VI++RA A+L+ + + L
Sbjct: 141 WGHVEKLTD-ATGYGVITSRAFAELNDFVRLAGHLLAP 177
>gi|311696580|gb|ADP99453.1| glucose-inhibited division protein B [marine bacterium HP15]
Length = 214
Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ + EKL F L KW++ NL + R + DSL +
Sbjct: 10 LRDGLATMGLSLDEDRQEKLLAFLGLLNKWNRAYNLTAVRDERVMVSRQLLDSLSILPWV 69
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ +D+G+GGG PGI +I L L++S KK FL V + +V
Sbjct: 70 TTDHL-LDVGAGGGLPGIPLAIALPEKR---FTLLDSNGKKTRFLNQCVLELGLKNVEVV 125
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R ++ IS+RA L+ L+ + L +
Sbjct: 126 HGRAEDC-NPPEPFSQISSRAFTALENLVSWCGDLLANE 163
>gi|52426408|ref|YP_089545.1| glucose-inhibited division protein B [Mannheimia succiniciproducens
MBEL55E]
gi|81609342|sp|Q65Q00|RSMG_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52308460|gb|AAU38960.1| GidB protein [Mannheimia succiniciproducens MBEL55E]
Length = 213
Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ LL ++S + KL L KW+K NL S + I+H+ DS+ V
Sbjct: 12 KLEILLKQTALSISDQQKNKLVQLVLLLNKWNKAYNLTSVRDPMEMLIKHILDSV-VVSP 70
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ ++ID+G+G G PG+ +I L++S K+ SF+R V++ V
Sbjct: 71 YLQGDLFIDVGTGPGLPGLPLAIINPDKN---FVLLDSLGKRISFIRNAVRELELSNVVP 127
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E D I +RA A L + ++ +K
Sbjct: 128 VLSRVEEYIPDHKFDGILSRAFAILKDMTDWCHHLPNEK 166
>gi|188994960|ref|YP_001929212.1| 16S rRNA methyltransferase GidB [Porphyromonas gingivalis ATCC
33277]
gi|188594640|dbj|BAG33615.1| glucose-inhibited division protein B [Porphyromonas gingivalis ATCC
33277]
Length = 224
Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 10/160 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ + ++S E+ E L+ W+ IN++S +++ ++ HV +
Sbjct: 19 EIIEKYFPHLSERQREQFEQMGGLYTHWNALINVISRKDIDNLYLHHVLHSLGIARMLNF 78
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ +DLG+GGGFPGI +I L++S KK V + +
Sbjct: 79 KPGTSVLDLGTGGGFPGIPLAILFP---QVSFLLVDSIGKKVKVASAVAEALGLDNVRTM 135
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
CR + D + +RA+ L L + + ++
Sbjct: 136 HCRAESIG---EKFDFVVSRAVMKLSELAKICRKLIRRED 172
>gi|153956501|ref|YP_001397266.1| 16S rRNA methyltransferase GidB [Clostridium kluyveri DSM 555]
gi|219856804|ref|YP_002473926.1| hypothetical protein CKR_3461 [Clostridium kluyveri NBRC 12016]
gi|189039495|sp|A5N449|RSMG_CLOK5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766888|sp|B9DXR9|RSMG_CLOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146349359|gb|EDK35895.1| GidB [Clostridium kluyveri DSM 555]
gi|219570528|dbj|BAH08512.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 237
Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I+ N ++E K + + W+ K+NL + +D +H DS+RVF+
Sbjct: 5 EIMDTVCKDLGLNFNQEKYNKFIKYKDILKLWNDKMNLTAIVDDKDIIKKHFIDSIRVFK 64
Query: 68 LHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR- 124
P ID+G+G GFPGI I ++ + L++S NK+ FL VV
Sbjct: 65 FLPLKDAKSIIDVGTGAGFPGIPIKIIKPEVK---LILLDSLNKRIKFLNQVVLSIKLND 121
Query: 125 GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + DV+ +RA+A+L L E+ P++
Sbjct: 122 VTCIHGRAEDCARKIEYRENNDVVVSRAVANLTVLSEFCIPYIK 165
>gi|189039676|sp|Q3Z8E1|RSMG_DEHE1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 235
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLGSGGG 83
LE+ E +Y + ++ ++NL + + ED ++H DS + +D+GSG G
Sbjct: 19 QLEQFETYYRELVDYNSRVNLTAITGYEDIQLKHFLDSASLALAGIKGDEKLLDVGSGAG 78
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQ---MI 139
FPG+ I ++ G L+E+ KKA FL + K ++ + R ++A Q
Sbjct: 79 FPGLPLKIIFPGMKLG---LLEATQKKARFLSEITAKLGLTGVEIISQRAEDAAQNPLYR 135
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
++++RA+AD+ TL E + P+
Sbjct: 136 QKYTLVTSRAVADMATLAELTLPF 159
>gi|57234428|ref|YP_181508.1| methyltransferase GidB [Dehalococcoides ethenogenes 195]
gi|57224876|gb|AAW39933.1| methyltransferase GidB [Dehalococcoides ethenogenes 195]
Length = 253
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLGSGGG 83
LE+ E +Y + ++ ++NL + + ED ++H DS + +D+GSG G
Sbjct: 37 QLEQFETYYRELVDYNSRVNLTAITGYEDIQLKHFLDSASLALAGIKGDEKLLDVGSGAG 96
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQ---MI 139
FPG+ I ++ G L+E+ KKA FL + K ++ + R ++A Q
Sbjct: 97 FPGLPLKIIFPGMKLG---LLEATQKKARFLSEITAKLGLTGVEIISQRAEDAAQNPLYR 153
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
++++RA+AD+ TL E + P+
Sbjct: 154 QKYTLVTSRAVADMATLAELTLPF 177
>gi|91218084|ref|ZP_01255034.1| glucose-inhibited division protein B [Psychroflexus torquis ATCC
700755]
gi|91183728|gb|EAS70121.1| glucose-inhibited division protein B [Psychroflexus torquis ATCC
700755]
Length = 211
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 14 YLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHP 70
LL + ++ L++ E ++ W++KIN+VS +++ +IRHV S+ Q
Sbjct: 3 LLLKYFPDLDDNQLKQFEKISEVYKDWNQKINVVSRKDIDEIYIRHVLHSMGIAKIQPFL 62
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
S +D+G+GGGFPGI +I E L++S KK + VV++ K
Sbjct: 63 PGSKVLDVGTGGGFPGIPLAILFPETE---FTLVDSIGKKIKVVEDVVEELGLQNVKAIN 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ + D I +RA+A + + + W+ K
Sbjct: 120 DRVE---NISGEFDFIVSRAVAVMPSFV----HWVKGK 150
>gi|315497187|ref|YP_004085991.1| methyltransferase gidb [Asticcacaulis excentricus CB 48]
gi|315415199|gb|ADU11840.1| methyltransferase GidB [Asticcacaulis excentricus CB 48]
Length = 214
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
++V + L+ L F + + ++ +NLV +T+ +W RHV DS ++ P W DL
Sbjct: 12 FHVKQAALDDLTRFAKVLAERNEVMNLVGPATLPHYWSRHVLDSAQLLNHAPDARTWADL 71
Query: 79 GSGGGFPGIITSIQLSSIE--------GGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
G+G GFPG++ +I L + V LI+S K+ FL VV+ V
Sbjct: 72 GAGAGFPGVVLAILLKHLSTDSGETPTDRRVFLIDSLAKRCRFLGEVVRDLDLPATVIND 131
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + DV++ARA+A L L+ ++ + +
Sbjct: 132 RAENVS---LKVDVVTARAMAPLPKLIGFAESFFRK 164
>gi|187930587|ref|YP_001901074.1| 16S rRNA methyltransferase GidB [Ralstonia pickettii 12J]
gi|187727477|gb|ACD28642.1| methyltransferase GidB [Ralstonia pickettii 12J]
Length = 222
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 13/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------VFQLH 69
++ +++L + L KW++ NL + D H+ DSL +
Sbjct: 20 GLSLDDAQVDRLLAYQGLLAKWNRVYNLTAIRDAGDMLTHHLLDSLSAVSRIAGLARRAQ 79
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
P +D+GSGGG PGI +I V +++ KK +FL + +
Sbjct: 80 PDAPRVLDVGSGGGLPGIPLAIAFPD---VSVTMVDIVQKKTAFLTQCRAELGLANAQSH 136
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+++ T VI++RA A+L + + L
Sbjct: 137 WGHVEKLAD-ATGYGVITSRAFAELVDFVNLAGHLLAP 173
>gi|329965433|ref|ZP_08302357.1| 16S rRNA methyltransferase GidB [Bacteroides fluxus YIT 12057]
gi|328522225|gb|EGF49339.1| 16S rRNA methyltransferase GidB [Bacteroides fluxus YIT 12057]
Length = 206
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ E + Y L+ W+ KIN++S + + + HV +
Sbjct: 2 ELILKYFPDLTEEQERQFAALYDLYSDWNSKINVISRKDIGNLYEHHVLHSLGIAKVVNF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I + L++ I K + A+ + +
Sbjct: 62 RPGTKIMDLGTGGGFPGIPLAILFPEVRFHLMDSIGKKIRVAAEIADSIG--LKNVTFRH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R +E Q D + +RA+ L LL+
Sbjct: 120 ARAEEEKQT---FDFVVSRAVMPLADLLKI 146
>gi|332292513|ref|YP_004431122.1| methyltransferase GidB [Krokinobacter diaphorus 4H-3-7-5]
gi|332170599|gb|AEE19854.1| methyltransferase GidB [Krokinobacter diaphorus 4H-3-7-5]
Length = 209
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + +++ +E+ L+ W+ KIN+VS +++ ++RHV + Q
Sbjct: 2 DIILKYFPDLTETQIEQFSKLKDLYHDWNLKINVVSRKDIDEIYLRHVLHSLGIAKIQRF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +D+G+GGGFPG+ +I + LV+ I K K + + + T K
Sbjct: 62 NPGSKILDVGTGGGFPGVPLAILHPEVNFHLVDSIGKKIKVVNEVVEGLGIT--NVKTTN 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ D + +RA+A ++T + + + +K
Sbjct: 120 DRVETVKD---QYDFVVSRAVAQMETFVHWVKGRIAKK 154
>gi|187476516|ref|YP_784540.1| glucose inhibited division protein B [Bordetella avium 197N]
gi|123515348|sp|Q2L2S3|RSMG_BORA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115421102|emb|CAJ47586.1| glucose inhibited division protein B [Bordetella avium 197N]
Length = 224
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 12/150 (8%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------LHPYPSIWID 77
E EKL + +W++ NL + E I+H+ DSL V Q P+ D
Sbjct: 28 EQQEKLLRYMAQMQRWNRTYNLTAIRDPEQMLIQHLFDSLSVVQPLVRALQAGQPAKVYD 87
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I + + +++ KK +F++ + RI+
Sbjct: 88 VGSGGGLPGVVLAIVQPEWD---ITCVDAVEKKTAFVQQMAGTLMLPNLHAMHARIERVA 144
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
CDV+ +RA A L + +
Sbjct: 145 P--ADCDVVISRAFASLHDFANLAGRHVRP 172
>gi|309780415|ref|ZP_07675165.1| 16S rRNA methyltransferase GidB [Ralstonia sp. 5_7_47FAA]
gi|308920808|gb|EFP66455.1| 16S rRNA methyltransferase GidB [Ralstonia sp. 5_7_47FAA]
Length = 222
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 13/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------VFQLH 69
++ +++L + L KW++ NL + D H+ DSL +
Sbjct: 20 GLSLDEAQVDRLLAYQGLLAKWNRVYNLTAIRDAGDMLTHHLLDSLSAVSRIAELARRAQ 79
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
P +D+GSGGG PGI +I V +++ KK +FL + +
Sbjct: 80 PDAPRVLDVGSGGGLPGIPLAIAFPD---VSVTMVDIVQKKTAFLTQCRAELGLANAQSH 136
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+++ T VI++RA A+L + + L
Sbjct: 137 WGHVEKLAD-ATGYGVITSRAFAELVDFVNLAGHLLAP 173
>gi|241664776|ref|YP_002983136.1| 16S rRNA methyltransferase GidB [Ralstonia pickettii 12D]
gi|240866803|gb|ACS64464.1| methyltransferase GidB [Ralstonia pickettii 12D]
Length = 222
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 13/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------VFQLH 69
++ +++L + L KW++ NL + D H+ DSL +
Sbjct: 20 GLSLDEAQVDRLLAYQGLLAKWNRVYNLTAIRDAGDMLTHHLLDSLSAVSRIAELARRAQ 79
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
P +D+GSGGG PGI +I V +++ KK +FL + +
Sbjct: 80 PDAPRVLDVGSGGGLPGIPLAIAFPD---VSVTMVDIVQKKTAFLTQCRAELGLTNAQSH 136
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+++ T VI++RA A+L + + L
Sbjct: 137 WGHVEKLAD-ATGYGVITSRAFAELVDFVNLAGHLLAP 173
>gi|82703882|ref|YP_413448.1| methyltransferase GidB [Nitrosospira multiformis ATCC 25196]
gi|123543763|sp|Q2Y5B5|RSMG_NITMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82411947|gb|ABB76056.1| 16S rRNA m(7)G-527 methyltransferase [Nitrosospira multiformis ATCC
25196]
Length = 216
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + L KW++ NL + E HV DSL V D
Sbjct: 15 GLSITESNQARLLQYLALIQKWNRVHNLTAVREPEAMLALHVLDSLAVLPHIGGS-RIAD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G PGI ++ V L+ES +KKA+FL+ + E +
Sbjct: 74 VGSGAGLPGIPVALARPEWR---VVLVESNHKKAAFLQQARIELGLENVEVIGERMEGVR 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
+ + +RA +DL ++ +
Sbjct: 131 SNAGFNTVISRAFSDLADFVKLAGHL 156
>gi|166368103|ref|YP_001660376.1| glucose inhibited division protein B [Microcystis aeruginosa
NIES-843]
gi|189045859|sp|B0JYE6|RSMG_MICAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166090476|dbj|BAG05184.1| glucose inhibited division protein B [Microcystis aeruginosa
NIES-843]
Length = 225
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 24/174 (13%)
Query: 14 YLLNTYNVSRETLE---------KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
L +++ +ETLE + + Y L L+ +++ NL + E+FW +H+ DSL
Sbjct: 2 ILPELFDLWQETLEWQPDGAQQARFQQLYDLILEGNQRFNLTRITQPEEFWEKHLWDSLS 61
Query: 65 VFQLHPYPSIW--------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
IDLG+G GFPG+ +I V L++S KK +FL
Sbjct: 62 GLAWLQKSQPDLLTKSLSVIDLGTGAGFPGVPIAIAYPHW---SVTLLDSTQKKINFLEE 118
Query: 117 VVQKTAARGKV----FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V+ K A + + + D++ RA+ ++D + Y+ P+L +
Sbjct: 119 VIDKLELNNTKTRLGRAEIVGKNLKHNCAYDIVCLRAVGNVDICVNYALPFLKK 172
>gi|78044839|ref|YP_358880.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
gi|123577253|sp|Q3AG54|RSMG_CARHZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77996954|gb|ABB15853.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
Length = 235
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L+ + ++ +E ++ E +Y L + ++K NL + + ++ ++H DS V
Sbjct: 1 MEAKLKTFFAEFGLSIEKEKIQLFERYYRLLISENEKYNLTAVTGEDEVIVKHFLDSTAV 60
Query: 66 -FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+D+G+G GFPGI I + ++ L+ +S K+ FL VV++
Sbjct: 61 LIYRDLTDLNAVDIGTGAGFPGIPLKIMVPGLKLLLL---DSLKKRCLFLERVVRELNLT 117
Query: 124 RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
V R + DV +RA+A++ LLE+ P L
Sbjct: 118 NVTVINERAENLGRQKPFRELFDVTFSRAVAEVRVLLEFHAPLLR 162
>gi|39998552|ref|NP_954503.1| glucose-inhibited division protein B [Geobacter sulfurreducens PCA]
gi|55976460|sp|Q746Q5|RSMG_GEOSL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|39985499|gb|AAR36853.1| glucose-inhibited division protein B [Geobacter sulfurreducens PCA]
gi|298507494|gb|ADI86217.1| 16S rRNA (7-methyl-G527)-methyltransferase [Geobacter
sulfurreducens KN400]
Length = 217
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL+ +S E + F KW++KINL + + E+ ++H DSL + +L
Sbjct: 8 ILQEGAAELGVEISDELVTLFSLFADELKKWNRKINLTAITGDEEIALKHFVDSLALCRL 67
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+DLGSGGGFP + ++ ++ V+ +E K ++ R +
Sbjct: 68 VSGDDELLDLGSGGGFPVLPLALVFPTMTAVSVDAVEKKIIFQRHAARLLGCR--RFEAI 125
Query: 129 ACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWLYQK 167
R ++ P+M+ + I +RA +D+ + + P L +
Sbjct: 126 HARGEDLPRMLERRFNRIVSRAFSDIPSFARMALPLLMPQ 165
>gi|300689822|ref|YP_003750817.1| glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum PSI07]
gi|299076882|emb|CBJ49495.1| Glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum PSI07]
Length = 223
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------VFQLH 69
+ L++L + L KW++ NL + D H+ DSL V ++
Sbjct: 21 GLPLDAAQLDRLLAYQVLLAKWNRVYNLTAIRDAGDMLTHHLLDSLAAVPRIAGLVRRVQ 80
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
P +D+GSGGG PGI +I I V +++ KK +FL + +
Sbjct: 81 PEAPRVLDVGSGGGLPGIPLAIACPDIG---VTMVDIVQKKTAFLTQCRAELGLANAQSH 137
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+++ T VI++RA A+L+ + + L
Sbjct: 138 WGHVEKLAD-ATGYGVITSRAFAELNDFVRLAGHLLAP 174
>gi|84514916|ref|ZP_01002279.1| putative GidB, Glucose inhibited division protein [Loktanella
vestfoldensis SKA53]
gi|84511075|gb|EAQ07529.1| putative GidB, Glucose inhibited division protein [Loktanella
vestfoldensis SKA53]
Length = 214
Score = 91.7 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 85/151 (56%), Gaps = 4/151 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWI 76
+VSRETL L+ F L LKW+ KINL+S+S+ W RHV DS++V++ +W+
Sbjct: 16 GIDVSRETLADLQAFAALVLKWTPKINLISASSHAMIWDRHVVDSVQVYRHAPDDFHLWL 75
Query: 77 DLGSGGGFPGIITSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+GSGGGFPGI+ +I LIES +K +FLR +++ +V A RI+E
Sbjct: 76 DIGSGGGFPGIVAAILGKARHPDAQFVLIESDQRKVAFLRTAIRELGLTARVLADRIEEV 135
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P DV+S RAL + LL ++
Sbjct: 136 PP--AGADVVSVRALGSVSFLLPLIMQHIHP 164
>gi|319790745|ref|YP_004152385.1| methyltransferase gidb [Variovorax paradoxus EPS]
gi|315593208|gb|ADU34274.1| methyltransferase GidB [Variovorax paradoxus EPS]
Length = 213
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPSIWI 76
+S E+L + L LKW+K NL + H+ DSL V + +P +
Sbjct: 19 LSDRQGEQLLAYGTLMLKWNKVYNLTAVRDPAGVMTHHLLDSLAVIAPLQRQYPEQGRLL 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+GSG G PG+I +I I+ V+ +++ KKA+F++ V +
Sbjct: 79 DVGSGAGLPGVIIAIMRPDID---VSCLDAVAKKAAFVQQVAVELELPN--LRGLHARVE 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
+ + +VIS+RA A L S L
Sbjct: 134 LLEGSYNVISSRAFASLPDFFNGSKHLL 161
>gi|257070286|ref|YP_003156541.1| glucose-inhibited division protein B [Brachybacterium faecium DSM
4810]
gi|256561104|gb|ACU86951.1| glucose-inhibited division protein B [Brachybacterium faecium DSM
4810]
Length = 221
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGG 82
E LE E F L + L+ V+ W RH+ + + + + D+GSG
Sbjct: 18 ERLELAERFVALLADQGPERGLIGPREVDRLWERHLLNCALMVDAIDPSASTLADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
G PG++ +I ++ V LIE+ ++ ++L V + +V R +E +
Sbjct: 78 GLPGVVIAIARPDLQ---VTLIETMQRRTTWLEEVDAELGLGIEVVRARAEELHGHR-SF 133
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
+V++ARA+A LD L ++ P +
Sbjct: 134 EVVTARAVAALDKLARWTLPLVAD 157
>gi|146284512|ref|YP_001174665.1| 16S rRNA methyltransferase GidB [Pseudomonas stutzeri A1501]
gi|166224605|sp|A4VS72|RSMG_PSEU5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145572717|gb|ABP81823.1| glucose inhibited division protein B [Pseudomonas stutzeri A1501]
Length = 215
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIWIDLGSGGGFPGIITSIQLSS 95
+KW+K NL + ++ RH+ DSL V W+D+GSGGG PG+ +I
Sbjct: 39 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFVAERGRNWLDVGSGGGMPGVPLAIMFPE 98
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLD 154
L++S KK FL V + +V R+++ Q T D I++RA + L+
Sbjct: 99 ---RAFTLLDSNGKKTRFLTQVKLELKLANLEVVHARVEQF-QPSTAFDGITSRAFSSLE 154
Query: 155 TLLEYSFPW 163
++
Sbjct: 155 DFASWTRHL 163
>gi|192360168|ref|YP_001984270.1| methyltransferase GidB [Cellvibrio japonicus Ueda107]
gi|238692447|sp|B3PIT7|RSMG_CELJU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|190686333|gb|ACE84011.1| methyltransferase GidB [Cellvibrio japonicus Ueda107]
Length = 219
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 61/172 (35%), Gaps = 11/172 (6%)
Query: 3 YCDSNSILRANYL----LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
D NS+LR L E+L + F KW+K NL + V RH
Sbjct: 1 MSDVNSVLRKQLLNGAAQMGVAPGERQTEQLLAYIREFEKWNKAYNLSAVRDVTQMVARH 60
Query: 59 VEDSLRVFQLHPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+ DSL V ID+G+GGG PGI +I L++S KK FL
Sbjct: 61 LLDSLSVVPWIARSPYPLARMIDVGTGGGLPGIPLAIMFPEK---TFTLLDSNGKKTRFL 117
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V R E + +RA A L + E L
Sbjct: 118 FHVKTLLGLDNVTVENRRVEEFAPAGLFQGVISRAFASLQDMTEGCAGLLAP 169
>gi|255015260|ref|ZP_05287386.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_7]
Length = 220
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWID 77
+++ E+ Y L+ W+ KIN++S +E+ + HV SL + + + +D
Sbjct: 24 DLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSVMD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LG+GGGFPGI +I LV+ I K K + + CR +E Q
Sbjct: 84 LGTGGGFPGIPLAILFPETHFHLVDSIGKKIKVGQAVAEAIG--LENVSFRHCRGEEEKQ 141
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ D + +RA+ L L++ + +++
Sbjct: 142 L---FDFVVSRAVMPLADLVKIVRKNIKKEQ 169
>gi|312130642|ref|YP_003997982.1| 16S rRNA m(7)g-527 methyltransferase [Leadbetterella byssophila DSM
17132]
gi|311907188|gb|ADQ17629.1| 16S rRNA m(7)G-527 methyltransferase [Leadbetterella byssophila DSM
17132]
Length = 233
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
Query: 7 NSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SL 63
N ++A+ + + ++ E ++ E L+ +W+ +IN++S ++ + RHV +
Sbjct: 23 NGKVKADIIYKYFPELTEEQKDQFERLEDLYKEWNAQINVISRKDIDSLYERHVLHSLGI 82
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
S +D+G+GGGFPGI +I + L+++ KK ++ V
Sbjct: 83 AKVCTFAPDSDVLDVGTGGGFPGIPLAILFPEVNFH---LVDAVGKKIKVVQEVANGLGL 139
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + ++ T D + +RA+ ++ + + + K
Sbjct: 140 KN--VKAEHERVEKLRDTYDFVISRAVTRMEPFIGW----VRNK 177
>gi|120434758|ref|YP_860445.1| 16S rRNA methyltransferase GidB [Gramella forsetii KT0803]
gi|189039397|sp|A0LYD2|RSMG_GRAFK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117576908|emb|CAL65377.1| glucose inhibited division protein B [Gramella forsetii KT0803]
Length = 211
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ L + ++ + + K E L+ W+ KIN+VS +++ ++RH+ SL + ++
Sbjct: 1 MTLELLKKYFPALTDDQISKFEKLEELYKDWNLKINVVSRKDIDELYLRHILHSLGIVKV 60
Query: 69 HPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G+GGGFPGI +I +L++S KK + V +
Sbjct: 61 QSFNPGSKILDVGTGGGFPGIPLAIMHPE---SAFHLVDSIGKKIKVVDEVSEGLGLEN- 116
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
Q ++ D I +RA+A + T + + + ++
Sbjct: 117 -VTSFNQRVEELNGNYDFIVSRAVAVMPTFVRWVKGKIAKE 156
>gi|261856910|ref|YP_003264193.1| methyltransferase GidB [Halothiobacillus neapolitanus c2]
gi|261837379|gb|ACX97146.1| methyltransferase GidB [Halothiobacillus neapolitanus c2]
Length = 217
Score = 91.3 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
+++ + L KW++ NL + +ED +RHV D+L V +D+GSG G PG
Sbjct: 31 QRISAYIHLLAKWNRTYNLTAVRNLEDMRVRHVLDALAVRPWIRSAGHLVDVGSGPGIPG 90
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVI 145
I+ ++ S+ V LI+S K F V++ A V R++E P ++ D
Sbjct: 91 ILLALADESL---AVTLIDSNLKMTRFAEAAVRELAIENVTVLRSRVEEVP--ASSFDQA 145
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+RA A L + +
Sbjct: 146 ISRAFASTADFLRLTCHLVRP 166
>gi|282856298|ref|ZP_06265579.1| 16S rRNA methyltransferase GidB [Pyramidobacter piscolens W5455]
gi|282585875|gb|EFB91162.1| 16S rRNA methyltransferase GidB [Pyramidobacter piscolens W5455]
Length = 228
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S +T+ +L + L ++++ L E W H+ED L V L P +D+G+G
Sbjct: 13 SAKTVTQLRRYASLLAVANERVRLTGPYDEETLWTDHIEDCLHVLPLLPPSGTVVDVGTG 72
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMI 139
GG PG + ++ ++ L++S ++K L ++ +V R ++ A
Sbjct: 73 GGLPGAVLAVCRPDLK---FTLLDSLSRKTKALAEIIAALKLPNAEVICMRSEDFAAARR 129
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D RA+++ + EY P + +
Sbjct: 130 ERYDAAVVRAVSEAGVIAEYLAPLVRE 156
>gi|289548693|ref|YP_003473681.1| methyltransferase GidB [Thermocrinis albus DSM 14484]
gi|289182310|gb|ADC89554.1| methyltransferase GidB [Thermocrinis albus DSM 14484]
Length = 197
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 16/166 (9%)
Query: 6 SNSILRANYLL-NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ L + N +N++ E +++ + + +W+K NL S E RH DSL
Sbjct: 1 MPAELIKDIFQRNGFNLTEEQIQRFDLYLRELKRWNKVHNLTSLEEDEQIIKRHFLDSLT 60
Query: 65 VFQLHPYP------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D+GSG GFPG+ I + + LIES +KK SFL Y+
Sbjct: 61 LTLCIEEKGIDVKGKKVCDVGSGAGFPGVPLKIFY--QDAINLTLIESVSKKCSFLEYLK 118
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+V R ++ V+ +RAL L+ + P L
Sbjct: 119 VVLDIDYRVLCTRAEKVK---EKFYVVVSRALGPLEE----TLPLL 157
>gi|256384435|gb|ACU79005.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256385267|gb|ACU79836.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455461|gb|ADH21696.1| 16S rRNA methyltransferase GidB [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 231
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIW 75
+ +++E KL +Y + ++ ++K NL + + + + +H DSL Q
Sbjct: 12 KNFTINQEIKNKLNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
D+G+G GFPG++ I +I+ + LIES NKKA+FL+Y+VQK ++ R++E
Sbjct: 72 ADIGTGAGFPGVVLKIFFPNIK---LTLIESNNKKANFLKYLVQKLELNDVEILNKRVEE 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D++ +RA+A LD +LE +
Sbjct: 129 LNEYKEQFDIVISRAVAYLDIILELGVQLVK 159
>gi|325066327|ref|ZP_08125000.1| methyltransferase GidB [Actinomyces oris K20]
Length = 214
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 28 EHFAQMLAEEGELRGLVGPRELPRLWTRHIVNSAAVVPFLPARGSVADVGSGAGFPGIVV 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ A ++ DV++ARA
Sbjct: 88 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDNVTIR--RARAEEIKDRYDVVTARA 142
Query: 150 LADLDTLLEYSFPWLYQ 166
+A+L L+ + P L
Sbjct: 143 VANLSKLVRLTAPLLRP 159
>gi|291457896|ref|ZP_06597286.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419440|gb|EFE93159.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
Length = 261
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 23/166 (13%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-------------- 66
++ LEK +Y + +K +NL S + D ++H DSL +
Sbjct: 20 LTEAQLEKFFLYYERMTEKNKVMNLTSITEESDVVLKHFTDSLSLAAVSLPSAGDVSRET 79
Query: 67 --QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ID+G+G GFPG+ I +E L + ++ + FL ++++ +
Sbjct: 80 LLRNTLPGKRLIDVGTGAGFPGLALKIAFPELEVVLNDSLQK---RLRFLNELIEELNLK 136
Query: 125 G-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G R +E + D +RA+A L L EY P++
Sbjct: 137 GISCVHGRAEELAHERKWRGAFDFSVSRAVARLSVLSEYDLPFVKN 182
>gi|189040871|sp|A4SCT8|RSMG_PROVI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 221
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
++ E + L + + W+ K+NL+S IRHV SL +
Sbjct: 18 EGIQITDEQHQLLVRYAQMLESWNTKVNLISRKEDAPVLIRHVFHSLLPSLVHNFRDGET 77
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+DLG+GGG PGI +I ++ L++S KK + ++++ + R++
Sbjct: 78 VLDLGTGGGLPGIPLAIMYPQVQ---FLLVDSTGKKITACSAMIEELGLTNARAMHTRVE 134
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + + I +R +A L L Y+ P L +
Sbjct: 135 ELKGL--AFNTILSRQVAPLKELSRYAAPLLKK 165
>gi|95929979|ref|ZP_01312719.1| methyltransferase GidB [Desulfuromonas acetoxidans DSM 684]
gi|95133948|gb|EAT15607.1| methyltransferase GidB [Desulfuromonas acetoxidans DSM 684]
Length = 219
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L +S E E ++ + L W++KINL + W +H+ DSL + + S
Sbjct: 10 LPPMLQLSSEQYELIDQYLDELLVWNRKINLTAIRQKNICWQKHIIDSLMLGEFIDPDSC 69
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+D+GSG G P I I + V +++ +KK F ++ V+K + + RI+
Sbjct: 70 LLDIGSGAGLPSIPLKIFYPQL---SVTSVDTVSKKIQFQKHCVRKLHLTHYQALSTRIE 126
Query: 134 EAP-QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q I++RA + L + S +L
Sbjct: 127 HLNGQSQQRYPYITSRAFSSLAQFCQLSHHYLAD 160
>gi|312964008|ref|ZP_07778479.1| glucose inhibited division protein B [Pseudomonas fluorescens WH6]
gi|311282043|gb|EFQ60653.1| glucose inhibited division protein B [Pseudomonas fluorescens WH6]
Length = 214
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E L + L +KW+K NL + ++ RH+ DSL V W+D
Sbjct: 21 GIDLSAAQHELLLGYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVMPFIENG-RWLD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PGI +I + V ++S KK FL V + +V R+++
Sbjct: 80 VGSGGGMPGIPLAILFPEAQ---VTCLDSNGKKTRFLTQVKLELKLDNLQVIHSRVEDFT 136
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
+ + I +RA + ++ ++
Sbjct: 137 PEL-PFNGIVSRAFSSMENFSNWTRHL 162
>gi|154495104|ref|ZP_02034109.1| hypothetical protein PARMER_04151 [Parabacteroides merdae ATCC
43184]
gi|154085654|gb|EDN84699.1| hypothetical protein PARMER_04151 [Parabacteroides merdae ATCC
43184]
Length = 223
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ ++++ + L+ W+ KIN++S +E+ ++ HV + S +D+
Sbjct: 28 LTDAQKQQIDALFDLYSDWNSKINVISRKDIENLYLHHVLHSLGILKMLKFREGSTIMDI 87
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPGI +I L ++ LV+ I K K + + CR +E Q+
Sbjct: 88 GTGGGFPGIPLAILLPEVQFHLVDSIGKKIKVGQAVAEAIG--LKNVTFRHCRAEEEKQL 145
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQKK 168
D + +RA+ L L++ + + +++
Sbjct: 146 ---FDFVVSRAVMPLADLVKIARKNIKKEQ 172
>gi|307565608|ref|ZP_07628088.1| 16S rRNA methyltransferase GidB [Prevotella amnii CRIS 21A-A]
gi|307345767|gb|EFN91124.1| 16S rRNA methyltransferase GidB [Prevotella amnii CRIS 21A-A]
Length = 208
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-- 66
++ + + + ++S + +++ Y L+ W+ KIN++S +++ + HV S+ +
Sbjct: 1 MQIDIIKKYFKDLSDKQIKQFSLLYDLYQDWNAKINIISRKDIDNLYEHHVLHSMAIAKL 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D G+GGGFPGI +I + +++ K K A+ + ++
Sbjct: 61 IHFKAGTTILDFGTGGGFPGIPLAILFPEVSFKMIDGTGKKIKVATEIGKDIELR--NIL 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E D I +RA+ L L++ + +++
Sbjct: 119 PMHMRGEEEKD---KFDFIVSRAVMPLPNLIKIVRKNISKEQ 157
>gi|304313411|ref|YP_003813009.1| Methyltransferase, glucose inhibited division protein B [gamma
proteobacterium HdN1]
gi|301799144|emb|CBL47387.1| Methyltransferase, glucose inhibited division protein B [gamma
proteobacterium HdN1]
Length = 226
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL F L KW+K NL S E+ +RH+ DSL + +D+GSGGG PGI
Sbjct: 43 KLLKFLELLHKWNKAYNLTSVRDPEEMVVRHLLDSLSI-LPWVKGPKVLDIGSGGGLPGI 101
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+I LS + L++S KK FL+ + + E Q + D I++
Sbjct: 102 PLAICLSEL---SFTLLDSNGKKTRFLQQAATELSLPNLQIVNARVENFQPAQSFDQITS 158
Query: 148 RALADLDTLLEYSFP 162
RA + L ++ + P
Sbjct: 159 RAFSALTLFMQLATP 173
>gi|256840502|ref|ZP_05546010.1| 16S rRNA methyltransferase GidB [Parabacteroides sp. D13]
gi|256737774|gb|EEU51100.1| 16S rRNA methyltransferase GidB [Parabacteroides sp. D13]
Length = 230
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWID 77
+++ E+ Y L+ W+ KIN++S +E+ + HV SL + + + +D
Sbjct: 34 DLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSVMD 93
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LG+GGGFPGI +I LV+ I K K + + CR +E Q
Sbjct: 94 LGTGGGFPGIPLAILFPETHFHLVDSIGKKIKVGQAVAEAIG--LENVSFRHCRGEEEKQ 151
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ D + +RA+ L L++ + +++
Sbjct: 152 L---FDFVVSRAVMPLADLVKIVRKNIKKEQ 179
>gi|255531336|ref|YP_003091708.1| methyltransferase GidB [Pedobacter heparinus DSM 2366]
gi|255344320|gb|ACU03646.1| methyltransferase GidB [Pedobacter heparinus DSM 2366]
Length = 210
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
+++ + + +++ + + + + Y L+ W+ +IN++S +++ + RH+ + F
Sbjct: 3 IKSTLIQEYFKDLTEKQIAQFDQLYSLYSFWNAQINVISRKDIDELYERHILHSLGIAKF 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+G+GGGFPGI +I +L++S KK + V
Sbjct: 63 CTFKPGEKVLDVGTGGGFPGIPLAILFPET---YFHLVDSIGKKIKVVTEVASALGLEN- 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q+ D I +RA+ L +PW+ K
Sbjct: 119 -VKASHLRAEQVTDKFDFIVSRAVTRLIDF----YPWIKGK 154
>gi|224369582|ref|YP_002603746.1| GidB [Desulfobacterium autotrophicum HRM2]
gi|223692299|gb|ACN15582.1| GidB [Desulfobacterium autotrophicum HRM2]
Length = 228
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++++ +S + L + LKW++K N+ S + + +H DSL +
Sbjct: 21 EMVKSGGDQLGIALSPDHLGTMARHGTELLKWNRKFNITSITDPREMATKHFIDSLAIAP 80
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--- 124
P + +D+GSGGGFPG+ + +E V L+++ K+ SFL +V T +
Sbjct: 81 HIPENARVLDMGSGGGFPGVPLKVVRPDLE---VVLVDASRKRVSFLNRLVSLTGLKSIT 137
Query: 125 -GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + + P DV+++RA LD + + P+L
Sbjct: 138 AVHARAEILAKDPAFAGRFDVVTSRAFTALDRFVVLAAPFLSP 180
>gi|193806479|sp|A9IJ46|RSMG_BORPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 255
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH------VEDSLRVFQLHPY 71
V +KL + +W++ NL + E ++H V D L
Sbjct: 51 GLRVEAAQADKLLAYLAQMQRWNRTYNLTAIRDPEQMLVQHLFDSLSVVDPLSRVVGADT 110
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ D+GSGGG PG++ +I + + G V+ +E K +F+R + A +
Sbjct: 111 AATVYDIGSGGGLPGVVLAIMRPTWQIGCVDAVEK---KMAFVRQMSGVLALPNLRALHA 167
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E P CDV+ +RA A L+ + +
Sbjct: 168 RVEELPP--AGCDVVISRAFASLNDFASLAGRHVRN 201
>gi|163859297|ref|YP_001633595.1| glucose inhibited division protein B [Bordetella petrii DSM 12804]
gi|163263025|emb|CAP45328.1| glucose inhibited division protein B [Bordetella petrii]
Length = 295
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH------VEDSLRVFQLHPY 71
V +KL + +W++ NL + E ++H V D L
Sbjct: 91 GLRVEAAQADKLLAYLAQMQRWNRTYNLTAIRDPEQMLVQHLFDSLSVVDPLSRVVGADT 150
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ D+GSGGG PG++ +I + + G V+ +E K +F+R + A +
Sbjct: 151 AATVYDIGSGGGLPGVVLAIMRPTWQIGCVDAVEK---KMAFVRQMSGVLALPNLRALHA 207
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E P CDV+ +RA A L+ + +
Sbjct: 208 RVEELPP--AGCDVVISRAFASLNDFASLAGRHVRN 241
>gi|327482901|gb|AEA86211.1| 16S rRNA methyltransferase GidB [Pseudomonas stutzeri DSM 4166]
Length = 215
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSS 95
+KW+K NL + ++ RH+ DSL V W+D+GSGGG PG+ +I
Sbjct: 39 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFVAEGGRNWLDVGSGGGMPGVPLAIMFPE 98
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLD 154
L++S KK FL V + +V R+++ Q D I++RA + L+
Sbjct: 99 ---RAFTLLDSNGKKTRFLTQVKLELKLANLEVVHARVEQF-QPSIAFDGITSRAFSSLE 154
Query: 155 TLLEYSFPW 163
++
Sbjct: 155 DFASWTRHL 163
>gi|319940688|ref|ZP_08015030.1| ribosomal RNA small subunit methyltransferase G [Sutterella
wadsworthensis 3_1_45B]
gi|319805839|gb|EFW02606.1| ribosomal RNA small subunit methyltransferase G [Sutterella
wadsworthensis 3_1_45B]
Length = 214
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHP 70
L + +V L+ E + L LKW+K NL + E+ H+ DS + + P
Sbjct: 20 LSSNLDV----LKGFESYAELLLKWNKVYNLTAIRNPEEVLTHHLLDSATLVPALQRFVP 75
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG P + ++ L + V +++ KKA+F+ + +
Sbjct: 76 GVDAVLDVGCGGGLPSVPLALLLPHL---SVTGVDAVGKKAAFVNQAAIELGLKN--LTA 130
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R +M+ T I++RA A L + L
Sbjct: 131 RHARVEKMVGTWKAITSRAFASLADFTHLTMHLLA 165
>gi|329944748|ref|ZP_08292827.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 170
str. F0386]
gi|328529884|gb|EGF56774.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 170
str. F0386]
Length = 214
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPG++
Sbjct: 28 EHFAQMLAEEGELRGLVGPRELPRLWSRHIVNSAAVVPFLPARGSVADVGSGAGFPGVVV 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ A ++ DV++ARA
Sbjct: 88 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDNVTIR--RARAEEIKDRYDVVTARA 142
Query: 150 LADLDTLLEYSFPWLYQ 166
+A+L L+ + P L
Sbjct: 143 VANLSKLVRLTAPLLRP 159
>gi|150007125|ref|YP_001301868.1| 16S rRNA methyltransferase GidB [Parabacteroides distasonis ATCC
8503]
gi|189045872|sp|A6L982|RSMG_PARD8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149935549|gb|ABR42246.1| glucose-inhibited division protein [Parabacteroides distasonis ATCC
8503]
Length = 230
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWID 77
+++ E+ Y L+ W+ KIN++S +E+ + HV SL + + + +D
Sbjct: 34 DLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSVMD 93
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LG+GGGFPGI +I LV+ I K K + + CR +E Q
Sbjct: 94 LGTGGGFPGIPLAILFPETHFHLVDSIGKKIKVGQAVAEAIG--LENVSFRHCRGEEEKQ 151
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ D + +RA+ L L++ + +++
Sbjct: 152 L---FDFVVSRAVMPLADLVKIVRKNIKKEQ 179
>gi|269217842|ref|ZP_06161696.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 848
str. F0332]
gi|269212777|gb|EEZ79117.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 848
str. F0332]
Length = 224
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+ ++T ++L + + + + L+ ++ W RH+ +S+ + P+ + +D+G
Sbjct: 22 HFGQDTWQQLVDYAGMLEREGELRGLLGPRELKRLWTRHLLNSMAILDFIPFEAKVVDVG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
SG GFPG++ +I + + L++S ++A +L VV+ + +V R ++
Sbjct: 82 SGAGFPGVVAAIVRKDLR---LVLVDSMERRARWLNDVVKDLSLPNVEVVHARSEDLVGK 138
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A L LL ++ P L
Sbjct: 139 V-DADTVTARAVAALRKLLPWTMPLLK 164
>gi|296533442|ref|ZP_06896025.1| 16S rRNA methyltransferase GidB [Roseomonas cervicalis ATCC 49957]
gi|296266222|gb|EFH12264.1| 16S rRNA methyltransferase GidB [Roseomonas cervicalis ATCC 49957]
Length = 206
Score = 90.5 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MK +++ VSRET +LE F L L+W+ +INLV+SS RH+
Sbjct: 1 MKQDLIDTM-------PPVAVSRETEARLEAFLALLLRWNARINLVASSDPAVLRQRHIA 53
Query: 61 DSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DSL+ + L DLGSGGGFPG++ + + V+L+ES +K++FL+
Sbjct: 54 DSLQLLPLLPEGEGPMADLGSGGGFPGLVLASAV----TRPVHLVESDRRKSAFLQAAAA 109
Query: 120 KTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ KV A RI+ V++ARALA L+ +L ++ L +
Sbjct: 110 ELGLSHVKVHAERIEAVSLPPIA--VLTARALAPLEKMLPWAERLLAPE 156
>gi|262381122|ref|ZP_06074260.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_33B]
gi|262296299|gb|EEY84229.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_33B]
Length = 223
Score = 90.5 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 2 KYCDSNSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
+Y + + + L + + +++ E+ Y L+ W+ KIN++S +E+ + HV
Sbjct: 8 RYPMEQNTEKFSILTSYFPDLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVL 67
Query: 61 DSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
SL + + + +DLG+GGGFPGI +I LV+ I K K + +
Sbjct: 68 HSLGITDMLRFKPGSSVMDLGTGGGFPGIPLAILFPETHFHLVDSIGKKIKVGQAVAEAI 127
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
CR +E Q+ D + +RA+ L L++ + +++
Sbjct: 128 G--LENISFRHCRGEEEKQL---FDFVVSRAVMPLADLVKIVRKNIKKEQ 172
>gi|315657683|ref|ZP_07910565.1| glucose inhibited division protein B [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492155|gb|EFU81764.1| glucose inhibited division protein B [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 226
Score = 90.5 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L + ++ S + Y+ L + L+ W RH+ + + QL P
Sbjct: 26 LADVFDTSAGQMR---YYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSQLLPEGVQ 82
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D+GSG G PG++ +I + + LIES ++ +L++ +++ E
Sbjct: 83 VADVGSGAGLPGLVLAIGRPDL---SLTLIESMARRCEWLQFCIEELGLDNVRIRNARAE 139
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ T ++ARA+ +L TLL ++ P + ++
Sbjct: 140 DIRGKQTFSYLTARAVGNLSTLLGWTAPLVKKQ 172
>gi|304390474|ref|ZP_07372427.1| 16S rRNA methyltransferase GidB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326230|gb|EFL93475.1| 16S rRNA methyltransferase GidB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 226
Score = 90.5 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L + ++ S + Y+ L + L+ W RH+ + + QL P
Sbjct: 26 LADVFDTSAGQMR---YYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSQLLPEGVQ 82
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D+GSG G PG++ +I + + LIES ++ +L++ +++ E
Sbjct: 83 VADVGSGAGLPGLVLAIGRPDL---SLTLIESMARRCEWLQFCIEELGLDNVRIRNARAE 139
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ T ++ARA+ +L TLL ++ P + ++
Sbjct: 140 DIRGKQTFSYLTARAVGNLSTLLGWTAPLVKKQ 172
>gi|298345822|ref|YP_003718509.1| glucose-inhibited division protein B [Mobiluncus curtisii ATCC
43063]
gi|298235883|gb|ADI67015.1| glucose-inhibited division protein B [Mobiluncus curtisii ATCC
43063]
Length = 226
Score = 90.5 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L + ++ S + Y+ L + L+ W RH+ + + QL P
Sbjct: 26 LADVFDTSAGQMR---YYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSQLLPEGVQ 82
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D+GSG G PG++ +I + + LIES ++ +L++ +++ E
Sbjct: 83 VADVGSGAGLPGLVLAIGRPDL---SLTLIESMARRCEWLQFCIEELGLDNVRIRNARAE 139
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ T ++ARA+ +L TLL ++ P + ++
Sbjct: 140 DIRGKQTFSYLTARAVGNLSTLLGWTAPLVKKQ 172
>gi|119947333|ref|YP_945013.1| methyltransferase GidB [Psychromonas ingrahamii 37]
gi|189040711|sp|A1T0Z9|RSMG_PSYIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119865937|gb|ABM05414.1| methyltransferase GidB [Psychromonas ingrahamii 37]
Length = 207
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 4/160 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ + V+ + ++L L KW+K NL S E ++H+ DS+ V
Sbjct: 5 ENLQKLIDQTSLEVTDQQKQQLVQLVELLNKWNKAYNLTSVRDPEQMLVKHIMDSI-VVS 63
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +ID+G+G G PG+ +I + L++S K+ F+R + + +
Sbjct: 64 PYLIGERFIDVGTGPGLPGLPLAILNPDKQ---FVLLDSLGKRLRFIRQALLELGLKNVT 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E Q DV+ +RA A L +L + +++
Sbjct: 121 AVQSRVEEYQPEHKFDVVLSRAFASLHDMLYWCKHLPHEE 160
>gi|169832368|ref|YP_001718350.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
gi|169639212|gb|ACA60718.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
Length = 240
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 63/162 (38%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQ 67
LR + L F + + NL + +T + +H DSL
Sbjct: 9 LRKGAANWGLELGSRELALFSRFMESLSAGAARHNLTAITTPREIVAKHFLDSLAGLLVI 68
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ ID+GSG GFPG+ I ++ + L+ES KKA FL VV + G
Sbjct: 69 DPAAGTRIIDVGSGAGFPGLPLKIVRPELK---LTLLESSRKKADFLEAVVGELGLEGVQ 125
Query: 128 FACRIQEA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
R E P T ARA+A + L EY P+L
Sbjct: 126 VTGRRAEEAGRDPAHRGTYHWAVARAVAPVSVLSEYCLPFLR 167
>gi|145219090|ref|YP_001129799.1| glucose-inhibited division protein B [Prosthecochloris vibrioformis
DSM 265]
gi|145205254|gb|ABP36297.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium phaeovibrioides
DSM 265]
Length = 248
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
++ E + L + + W+ K+NL+S IRHV SL +
Sbjct: 45 EGIQITDEQHQLLVRYAQMLESWNTKVNLISRKEDAPVLIRHVFHSLLPSLVHNFRDGET 104
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+DLG+GGG PGI +I ++ L++S KK + ++++ + R++
Sbjct: 105 VLDLGTGGGLPGIPLAIMYPQVQ---FLLVDSTGKKITACSAMIEELGLTNARAMHTRVE 161
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + + I +R +A L L Y+ P L +
Sbjct: 162 ELKGL--AFNTILSRQVAPLKELSRYAAPLLKK 192
>gi|299065187|emb|CBJ36353.1| Glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum CMR15]
Length = 224
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 13/151 (8%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--------HPYPSIWI 76
L++L + L KW++ NL + V D H+ DSL P +
Sbjct: 29 QLDRLLAYQVLLAKWNRVYNLTAIRDVGDMLTHHLLDSLAAVPRIAERVRSVQPEAPRVL 88
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSGGG PGI +I I V +++ KK +FL + + +++
Sbjct: 89 DVGSGGGLPGIPLAIACPDI---SVTMVDIVQKKTAFLTQCRAELGLTNAQSHWGHVEKL 145
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ VI++RA A+L+ + + L
Sbjct: 146 ADAVG-YGVITSRAFAELNDFVRLAGHLLAP 175
>gi|323345433|ref|ZP_08085656.1| glucose inhibited division protein B [Prevotella oralis ATCC 33269]
gi|323093547|gb|EFZ36125.1| glucose inhibited division protein B [Prevotella oralis ATCC 33269]
Length = 208
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + + N++ E + E L+ +W+ KIN++S ++ + HV SL + +
Sbjct: 1 MTMEIIRKYFSNLTDEQQYQFEQLAPLYEEWNAKINVISRKDIDHLYEHHVLHSLAIAKE 60
Query: 69 HPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +D+G+GGGFPGI +I + L++ I K K A+ + + +
Sbjct: 61 ISFVSGTTVLDVGTGGGFPGIPLAILFPNCRFKLIDSIGKKVKVAAEIAAHIGLKNVDTE 120
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEY 159
D + +RA+ L + +
Sbjct: 121 HLRG-----ENEKGKYDFVVSRAVMSLPDMAKL 148
>gi|313892198|ref|ZP_07825791.1| 16S rRNA methyltransferase GidB [Dialister microaerophilus UPII
345-E]
gi|313119336|gb|EFR42535.1| 16S rRNA methyltransferase GidB [Dialister microaerophilus UPII
345-E]
Length = 231
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--Q 67
+ N + N +ET EKL + ++ ++ INL + E+ I++V DSL V+ +
Sbjct: 3 IFDNAIKKEIN--KETYEKLISYNKYVIEKNQHINLTGIKSEEESLIKNVYDSLTVYEEK 60
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +DLG+GGGFPG+I +I ++ L++ + K + ++ K
Sbjct: 61 YFPENGKILDLGTGGGFPGVILAILRPDMQVVLMDAVRKKLDAIKEILEKLE--IKNAKT 118
Query: 128 FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R ++A D+++ARA+ ++T+ E++ P++ ++
Sbjct: 119 LHARAEDAARDENYRDVFDIVTARAVKRMNTVSEWALPFVKKE 161
>gi|331703898|ref|YP_004400585.1| methyltransferase GidB (glucose inhibited division protein B)
[Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328802453|emb|CBW54608.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 231
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIW 75
+ +++E KL +Y + ++ ++K NL + + + + +H DSL Q
Sbjct: 12 KNFTINQEIKNKLNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
D+G+G GFPG++ I +I+ + LIES NKKA+FL+Y+VQK ++ R +E
Sbjct: 72 ADIGTGAGFPGVVLKIFFPNIK---LTLIESNNKKANFLKYLVQKLELNDVEILNKRAEE 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
Q D++ +RA+A LD +LE +
Sbjct: 129 LNQYKEQFDIVISRAVAYLDIILELGVQLVK 159
>gi|75910084|ref|YP_324380.1| 16S rRNA methyltransferase GidB [Anabaena variabilis ATCC 29413]
gi|123608498|sp|Q3M6A1|RSMG_ANAVT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|75703809|gb|ABA23485.1| 16S rRNA m(7)G-527 methyltransferase [Anabaena variabilis ATCC
29413]
Length = 245
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-------LRVFQLHPYPSI 74
+ + + Y L L+ ++++NL + ++FW +H+ DS ++ P +
Sbjct: 21 TDSQQARFQQLYELILEGNRQLNLTRITEPQEFWEKHLWDSLRGVAPQQQLISFLPVGAS 80
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFAC 130
ID+G+G GFPG+ +I + + L++S KK +F+ ++++ A
Sbjct: 81 VIDIGTGAGFPGVPVAIIAPN---STMTLVDSTRKKIAFIESILKELGLTNAKTLVSRAE 137
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
I + PQ DV RA+ EY+ P L
Sbjct: 138 EIGQQPQHREQYDVALIRAVGTASACAEYTLPLLK 172
>gi|326772849|ref|ZP_08232133.1| 16S rRNA methyltransferase GidB [Actinomyces viscosus C505]
gi|326637481|gb|EGE38383.1| 16S rRNA methyltransferase GidB [Actinomyces viscosus C505]
Length = 216
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 30 EHFAQMLAEEGELRGLVGPRELPRLWTRHIVNSAAVVPFLPARGSVADVGSGAGFPGIVV 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ A ++ DV++ARA
Sbjct: 90 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDNVTIR--RARAEEVKDRYDVVTARA 144
Query: 150 LADLDTLLEYSFPWLYQ 166
+A+L L+ + P L
Sbjct: 145 VANLSKLVRLTAPLLRP 161
>gi|325265689|ref|ZP_08132378.1| glucose inhibited division protein B [Kingella denitrificans ATCC
33394]
gi|324982820|gb|EGC18443.1| glucose inhibited division protein B [Kingella denitrificans ATCC
33394]
Length = 210
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 4/164 (2%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ L+ ++ L + L KW+ NL + H+ DS
Sbjct: 1 MTELKEQLKLGLQAMHLDLPTAQQLLLLEYVALLKKWNHTYNLTALRDENQMISHHILDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+GSGGG PGI +I + + L++S KK SFL+ V +
Sbjct: 61 LTLLPYIKNATSMMDVGSGGGMPGIPAAICRPDLN---ITLLDSNTKKTSFLQQAVIELG 117
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ A EA DV+++RA A+L + + L +
Sbjct: 118 LQNVTVASGRVEA-MHDKKVDVVTSRAFAELHDFIALTKHLLNE 160
>gi|298377550|ref|ZP_06987502.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_19]
gi|301311210|ref|ZP_07217138.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 20_3]
gi|298265569|gb|EFI07230.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_19]
gi|300830784|gb|EFK61426.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 20_3]
Length = 230
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWID 77
+++ E+ Y L+ W+ KIN++S +E+ + HV SL + + + +D
Sbjct: 34 DLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSVMD 93
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LG+GGGFPGI +I LV+ I K K + + CR +E Q
Sbjct: 94 LGTGGGFPGIPLAILFPETHFHLVDSIGKKIKVGQAVAEAIG--LENVSFRHCRGEEEKQ 151
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ D + +RA+ L L++ + +++
Sbjct: 152 L---FDFVVSRAVMPLADLVKIVRKNIKKEQ 179
>gi|62263584|gb|AAX78174.1| unknown protein [synthetic construct]
Length = 240
Score = 90.5 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 3 YCDSNSILRA-NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
+ + + L+ ++ + +++ + L KW+K N+ + +++ ++H+
Sbjct: 24 MLEMDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHL 83
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DSL V + +D+G+GGG PG++ +I + L++S KK FL+ V +
Sbjct: 84 FDSLAVAKYIK-GDSTVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKK 139
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D I +RA + +DT E +L +
Sbjct: 140 SLSLNN--INPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTE 184
>gi|315654395|ref|ZP_07907303.1| glucose inhibited division protein B [Mobiluncus curtisii ATCC
51333]
gi|315491430|gb|EFU81047.1| glucose inhibited division protein B [Mobiluncus curtisii ATCC
51333]
Length = 226
Score = 90.5 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L + ++ S + Y+ L + L+ W RH+ + + +L P
Sbjct: 26 LADVFDTSAGQMR---YYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSELLPEGVQ 82
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D+GSG G PG++ +I + + LIES ++ +L++ V++ E
Sbjct: 83 VADVGSGAGLPGLVLAIGRPDL---SLTLIESMARRCEWLQFCVEELGLDNVRIRNARAE 139
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ ++ARA+ +L TLL ++ P + ++
Sbjct: 140 DVRGKQNFSYLTARAVGNLSTLLGWTAPLVKKQ 172
>gi|224283946|ref|ZP_03647268.1| glucose-inhibited division protein B [Bifidobacterium bifidum NCIMB
41171]
gi|313141098|ref|ZP_07803291.1| methyltransferase gidB [Bifidobacterium bifidum NCIMB 41171]
gi|313133608|gb|EFR51225.1| methyltransferase gidB [Bifidobacterium bifidum NCIMB 41171]
Length = 232
Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 24/183 (13%)
Query: 6 SNSILRANYLLNTYNVS---RETL----EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
+ I+ + + S RETL +KLE F+ + + L+ + W RH
Sbjct: 1 MSDIVSRETSGDELDDSAIVRETLGEAYDKLEVFHVKLSREGELRGLIGPRDISIIWERH 60
Query: 59 VEDSLRVFQLHPYPSIWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+ +S + D+GSGGGFPGI+ + + LIE ++
Sbjct: 61 ILNSAACVPFIREVTDRSKAKTIADVGSGGGFPGIVAAACMPD---CAFTLIEPMERRVE 117
Query: 113 FLRYVVQKTAARGKVF-----ACRIQEAPQMIT---TCDVISARALADLDTLLEYSFPWL 164
+L+ V + I +++ RA+A + L ++ P L
Sbjct: 118 WLQECVDDMDLQNVTIIRARSDEVIDRIKHHEGELKPFSIVTCRAVAPMTKLAGWTLPLL 177
Query: 165 YQK 167
+
Sbjct: 178 RPQ 180
>gi|320532821|ref|ZP_08033598.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134972|gb|EFW27143.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 171
str. F0337]
Length = 214
Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 28 EHFAQMLAEEGELRGLVGPRELPRLWSRHIVNSAAVVPFLPARGSVADVGSGAGFPGIVV 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ A ++ DV++ARA
Sbjct: 88 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDNVTVR--RARAEEIKDRYDVVTARA 142
Query: 150 LADLDTLLEYSFPWLYQ 166
+A+L L+ + P L
Sbjct: 143 VANLSKLVRLTAPLLRP 159
>gi|315925602|ref|ZP_07921812.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621143|gb|EFV01114.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 244
Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 13/174 (7%)
Query: 1 MKYCDSNSILR---ANYLLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFW 55
MK + NS+ + + ++S LEKL F ++ INL + F
Sbjct: 1 MKIIEENSVEINAFKKRIASALPVSLSEGQLEKLYRFMESLKAVNEHINLTRITDDNAFV 60
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+H+ DSL L P ID+G+GGGFPGI +I + L+++ KK +
Sbjct: 61 EKHLLDSLA-CPLTPADQRIIDVGTGGGFPGIPLAIAYPQKQ---FVLVDATAKKVKAVE 116
Query: 116 YVVQKTAARGKVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ EA P D +RA+A L E P +
Sbjct: 117 KIAADLGLANIELTAARAEALGKNPAYRERFDAACSRAVAAYGILSELCLPLVR 170
>gi|328952572|ref|YP_004369906.1| Ribosomal RNA small subunit methyltransferase G [Desulfobacca
acetoxidans DSM 11109]
gi|328452896|gb|AEB08725.1| Ribosomal RNA small subunit methyltransferase G [Desulfobacca
acetoxidans DSM 11109]
Length = 226
Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ S ET+ + + L+W+ ++NL T D ++H DSL V+ + D
Sbjct: 24 GLSTSPETIRQFLVYCDELLRWNARVNLTGLKTASDVVVKHFLDSLAVWPWVRDLTSLAD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-- 134
+G+G GFPG+ + L + + L+E KK++FLRY+ +V +
Sbjct: 84 IGTGAGFPGLALKLALPHL---HLTLLEPTGKKSTFLRYLTIHLNLANVEVRQVYLTPSL 140
Query: 135 APQMITTCDVISARALADLDTLLEYSFPW 163
A Q + RA L L + P
Sbjct: 141 ARQWGPQFHGVITRAAFSLPRFLALAAPL 169
>gi|311745733|ref|ZP_07719518.1| 16S rRNA methyltransferase GidB [Algoriphagus sp. PR1]
gi|126575176|gb|EAZ79526.1| 16S rRNA methyltransferase GidB [Algoriphagus sp. PR1]
Length = 214
Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
N++ + + K + L+ W+ KIN++S ++ F+I HV + + +D
Sbjct: 14 NLTEDQIAKFDRLQELYEDWNSKINVISRKDMDQFYIHHVLHSLGISKVMNFQPGTKILD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGGFPGI +I +L++S KK + ++ V ++ + A Q
Sbjct: 74 IGTGGGFPGIPLAILFPDT---HFHLVDSIGKKITVVKDVAKQLKLAN--VEAQQTRAEQ 128
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
++ D + +RA+ + +PW+ K
Sbjct: 129 LVRKYDFVISRAVTRMANF----YPWVKNK 154
>gi|305664499|ref|YP_003860786.1| glucose-inhibited division protein B [Maribacter sp. HTCC2170]
gi|88708516|gb|EAR00752.1| glucose-inhibited division protein B [Maribacter sp. HTCC2170]
Length = 221
Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
++A + + N+S + L+ W+ KIN+VS +++ ++RHV +
Sbjct: 11 MKAELVFKYFPNLSEAQKTQFIRLEELYKDWNLKINVVSRKDIDELYLRHVLHSLGIAKI 70
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
Q + +D+G+GGGFPGI +I + L++S KK ++ VV+
Sbjct: 71 QEFKPGASILDVGTGGGFPGIPLAILFPEAD---FTLVDSIGKKVKVVQEVVEGLGIENV 127
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E D I +RA+A + T + + + ++
Sbjct: 128 TSINSRVEEVN---GRYDFIVSRAVAAMPTFVHWVKGKIKKE 166
>gi|304320461|ref|YP_003854104.1| glucose inhibited division protein B [Parvularcula bermudensis
HTCC2503]
gi|303299363|gb|ADM08962.1| glucose inhibited division protein B [Parvularcula bermudensis
HTCC2503]
Length = 215
Score = 90.1 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPY 71
L++ +++ T + + L+ S NL++ S++ D W RH DSL+ + +
Sbjct: 12 EDLVDAFDLDDATAALIAAYDSHLLEVSAHTNLLARSSLADRWARHYADSLQLARFIPDH 71
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
S ++DLGSG GFPG++ +I V L +S KKA FL+ + V A R
Sbjct: 72 ASSYLDLGSGAGFPGLLLAIVHRH-RPCRVTLCDSVGKKARFLKETAEALGLDITVEARR 130
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +VI+ARA+ LD LL P L +
Sbjct: 131 AEALAAAGDRFEVITARAVTALDKLLGLCAPLLPK 165
>gi|310778409|ref|YP_003966742.1| 16S rRNA m(7)G-527 methyltransferase [Ilyobacter polytropus DSM
2926]
gi|309747732|gb|ADO82394.1| 16S rRNA m(7)G-527 methyltransferase [Ilyobacter polytropus DSM
2926]
Length = 233
Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + ++ L + L L+ +K NL + + +H DS+ +
Sbjct: 1 MREYLLKGLESLGLEFDKVIIDNLIAYAKLLLETNKHTNLTAIRDEDSLIEKHFIDSMLL 60
Query: 66 FQLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ + ID+G+G GFPG++ +I I+ L++S KK FL V +
Sbjct: 61 QKSISENTETAIDIGTGAGFPGMVLAICNPKIK---FTLMDSVGKKTDFLEMVKNELGLE 117
Query: 124 RGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSFPWLY 165
+V R +E + T D+ R ++ L+ +LEY P+L
Sbjct: 118 NVEVINDRAEEFIKNEKRGTYDLGLCRGVSKLNVILEYMIPFLK 161
>gi|225025343|ref|ZP_03714535.1| hypothetical protein EIKCOROL_02241 [Eikenella corrodens ATCC
23834]
gi|224941897|gb|EEG23106.1| hypothetical protein EIKCOROL_02241 [Eikenella corrodens ATCC
23834]
Length = 209
Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
N+S L L KW++ NL + + RH+ DSL + +D
Sbjct: 15 GLNLSTAQQLLLLEHASLLQKWNRTYNLTALRRNDQIISRHILDSLTLLPYVKEAKTLMD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI T+I ++ + L+++ KK +FL+ V + A E
Sbjct: 75 VGSGGGMPGIPTAICRPDLQ---ITLLDANTKKTAFLQQTVIELGLSNVTVAAGRVETI- 130
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA A+L + L +
Sbjct: 131 YDKKVDVVTSRAFAELADFAALTKHLLNE 159
>gi|254375227|ref|ZP_04990707.1| glucose-inhibited cell division protein [Francisella novicida
GA99-3548]
gi|151572945|gb|EDN38599.1| glucose-inhibited cell division protein [Francisella novicida
GA99-3548]
Length = 205
Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 6 SNSILRA-NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ + L+ ++ + +++ + L KW+K N+ + +++ ++H+ DS
Sbjct: 1 MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNITAIKNIDEMLVKHLFDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G+GGG PG++ +I + L++S KK FL+ V + +
Sbjct: 61 LAVAKYIK-GDSTVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLS 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 117 LNN--INPINTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|54112557|gb|AAV28912.1| NT02FT1550 [synthetic construct]
Length = 205
Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 6 SNSILRA-NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ I L+ ++ + +++ + L KW+K N+ + +++ ++H+ DS
Sbjct: 1 MDIIKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G+GGG PG++ +I + L++S KK FL+ V + +
Sbjct: 61 LAVAKYIK-GDSTVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLS 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 117 LNN--INPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|104784444|ref|YP_610942.1| 16S rRNA methyltransferase GidB [Pseudomonas entomophila L48]
gi|122401170|sp|Q1I2H7|RSMG_PSEE4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|95113431|emb|CAK18159.1| glucose-inhibited division protein B [Pseudomonas entomophila L48]
Length = 216
Score = 90.1 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDLG 79
+S + E L + L +KW+K NL + ++ RH+ DSL V H W+D+G
Sbjct: 24 LSAQQHELLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMPFIHNDTQRWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
SGGG PGI +I + V +++S KK FL V + V R++E Q
Sbjct: 84 SGGGMPGIPLAILHPHKQ---VTVLDSNGKKTRFLTQVKMELKLDNLTVIHSRVEEV-QP 139
Query: 139 ITTCDVISARALADLDTLLEYSFPW 163
I +RA + ++ ++
Sbjct: 140 EQPFCGIISRAFSSMENFTNWTRHL 164
>gi|329121704|ref|ZP_08250321.1| glucose inhibited division protein B [Dialister micraerophilus DSM
19965]
gi|327468174|gb|EGF13660.1| glucose inhibited division protein B [Dialister micraerophilus DSM
19965]
Length = 231
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--Q 67
+ N + N +ET EKL + ++ ++ INL + E+ I++V DSL V+ +
Sbjct: 3 IFDNAIKKEIN--KETYEKLISYNKYVIEKNQHINLTGIKSEEESLIKNVYDSLTVYEEK 60
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +DLG+GGGFPG+I +I ++ L++ + K + ++ K
Sbjct: 61 YFPENGKILDLGTGGGFPGVILAILRPDMQVVLMDAVRKKLDAIKEILEKLE--IKNAKT 118
Query: 128 FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R ++A + D+++ARA+ ++T+ E++ P++ ++
Sbjct: 119 LHARAEDAARDEKYRDVFDIVTARAVKRMNTVSEWALPFVKKE 161
>gi|72163511|ref|YP_291168.1| 16S rRNA methyltransferase GidB [Thermobifida fusca YX]
gi|123628492|sp|Q47K77|RSMG_THEFY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71917243|gb|AAZ57145.1| Glucose inhibited division protein [Thermobifida fusca YX]
Length = 237
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
ETL + + L L+ V W RH+ + V +L P + IDLGSG G
Sbjct: 17 ETLPVAQRYAELLADVGVARGLIGPREVPRLWERHLMNCAVVEELIPKGADVIDLGSGAG 76
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PG++ +I + V L+E ++ FL V+ +V+ R +E +
Sbjct: 77 LPGVVLAILRPDL---SVTLLEPLLRRTVFLNECVELLRLDNVRVYRGRAEEVHAKL-RA 132
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D+++ARA+A L L+ ++ P L +
Sbjct: 133 DIVTARAVAPLPKLIGWALPLLRK 156
>gi|332881974|ref|ZP_08449615.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332680100|gb|EGJ53056.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 206
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-- 65
I+ + +S E ++ ++ +W+ KIN++S + DF+ RHV SL +
Sbjct: 2 EIINKYFPQ----LSEEQQQQFAQLKPIYEEWNAKINVISRKDMSDFYERHVLHSLAIAK 57
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+G+GGGFPGI ++ L++S KK ++ VV +
Sbjct: 58 RINFCKGTDILDVGTGGGFPGIPLAVLFPECN---FTLVDSIGKKIKVVQEVVNTLELKN 114
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A ++ + D + +RA+ + + PW+ K
Sbjct: 115 --VTAMQIRAEELKGSYDFVVSRAVTQMQDFV----PWVKGK 150
>gi|327402673|ref|YP_004343511.1| 16S rRNA m(7)G-527 methyltransferase [Fluviicola taffensis DSM
16823]
gi|327318181|gb|AEA42673.1| 16S rRNA m(7)G-527 methyltransferase [Fluviicola taffensis DSM
16823]
Length = 217
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 69/170 (40%), Gaps = 12/170 (7%)
Query: 6 SNSILRA---NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ I + + ++ ++ E L+L W+ +IN++S DF+ HV
Sbjct: 1 MSFIYIKMSVELIEKYFPKLTAVQKKQFERLEELYLFWNAQINVISRKDTADFYEHHVLH 60
Query: 62 --SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ S +D+G+GGGFPGI +I ++ L++S KK + + Q
Sbjct: 61 SLGIAKIMEFAPGSSVLDIGTGGGFPGIPLAILFPEVQFH---LVDSIGKKIKVVNEIAQ 117
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF-PWLYQKK 168
+ A + D I +RA+ + L ++ +L + K
Sbjct: 118 ALDLKN--VCGTHARAEDIKEQFDFIVSRAVTAMPAFLPWTKGKFLKENK 165
>gi|71083058|ref|YP_265777.1| glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|123647185|sp|Q4FNR5|RSMG_PELUB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71062171|gb|AAZ21174.1| Glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 213
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVED--FWIRHVEDSL 63
I + LL NV RETL + + F + + ++KIN++S T ++ RH+ DS
Sbjct: 1 MEEIFKNYPLLKNQNVPRETLIEFDLFISMLQEENEKINIISKETAKNEVIRERHIVDSA 60
Query: 64 RVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKT 121
++ + +I D+GSGGG PGII SI + + + V+L E + K+SFLR V +
Sbjct: 61 QIIEFVDLNSNIITDIGSGGGMPGIIISIMIKNQKNLAKVHLYEKSHHKSSFLRKVSRDL 120
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+V I EA ++ + I ARA L +L+
Sbjct: 121 KLNTEVMQENIFEAEKLDSGT--IMARAFKPLPIILDL 156
>gi|56708696|ref|YP_170592.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110671168|ref|YP_667725.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
tularensis FSC198]
gi|224457904|ref|ZP_03666377.1| glucose-inhibited division protein B [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254368470|ref|ZP_04984487.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica FSC022]
gi|254371326|ref|ZP_04987328.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis FSC033]
gi|254875570|ref|ZP_05248280.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|81597046|sp|Q5NEF0|RSMG_FRATT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122970832|sp|Q14FV3|RSMG_FRAT1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56605188|emb|CAG46320.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110321501|emb|CAL09703.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis FSC198]
gi|151569566|gb|EDN35220.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis FSC033]
gi|157121364|gb|EDO65565.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica FSC022]
gi|254841569|gb|EET20005.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|282159946|gb|ADA79337.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis NE061598]
Length = 205
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 6 SNSILRA-NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ + L+ ++ + +++ + L KW+K N+ + +++ ++H+ DS
Sbjct: 1 MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G+GGG PG++ +I + L++S KK FL+ V + +
Sbjct: 61 LAVAKYIK-GDSTVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLS 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 117 LNN--INPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|118496713|ref|YP_897763.1| glucose-inhibited cell division protein [Francisella tularensis
subsp. novicida U112]
gi|194324020|ref|ZP_03057795.1| methyltransferase GidB [Francisella tularensis subsp. novicida FTE]
gi|166224589|sp|A0Q444|RSMG_FRATN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118422619|gb|ABK89009.1| glucose-inhibited cell division protein [Francisella novicida U112]
gi|194321917|gb|EDX19400.1| methyltransferase GidB [Francisella tularensis subsp. novicida FTE]
Length = 205
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 6 SNSILRA-NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ + L+ ++ + +++ + L KW+K N+ + +++ ++H+ DS
Sbjct: 1 MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G+GGG PG++ +I + L++S KK FL+ V + +
Sbjct: 61 LAVAKYIK-GDSTVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLS 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 117 LNN--INPINTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|300857409|ref|YP_003782393.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
gi|300437524|gb|ADK17291.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
Length = 237
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
+ K + + W+ KINL + ED +H D +++F+ P S
Sbjct: 15 GLEFDEKKYSKFIKYKDILKFWNNKINLTTIVEDEDIIKKHFIDCVKIFKFSPLRDISNV 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
ID+G+G GFPGI I I+ V L++S NK+ +FL V+ K R ++
Sbjct: 75 IDIGTGAGFPGIPMKIVNPQIK---VVLLDSLNKRINFLNQVISDIELNDIKCIHGRAED 131
Query: 135 AP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA+A+L L E+ P++
Sbjct: 132 FSKDIEYREKFDAAVSRAVANLTVLSEFCIPYIK 165
>gi|226357390|ref|YP_002787130.1| 16S rRNA methyltransferase GidB [Deinococcus deserti VCD115]
gi|259495492|sp|C1D0A7|RSMG_DEIDV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226319380|gb|ACO47376.1| putative methyltransferase (Glucose-inhibited division protein B)
[Deinococcus deserti VCD115]
Length = 244
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 9/147 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSGGG 83
L++ L + + + NL + T D ++H D + +DLG+G G
Sbjct: 24 LDQFAALLVLLQEGNARFNLTALKTERDIVLKHFVDSLTCLGGGHLDGNHQVVDLGTGAG 83
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ---EAPQMI 139
FP + ++ + ++ ++S KK F+R + + A R + P+
Sbjct: 84 FPTLPLALMRAELQ---FTPVDSTRKKVEFVRATAEALGLQNVRPVAGRAETLTRQPEHR 140
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D + RA+A L L E + P+L
Sbjct: 141 DRYDRVVVRAVAALPILAELALPFLRP 167
>gi|89255506|ref|YP_512867.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica LVS]
gi|115314026|ref|YP_762749.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica OSU18]
gi|156501436|ref|YP_001427501.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167009351|ref|ZP_02274282.1| methyltransferase GidB [Francisella tularensis subsp. holarctica
FSC200]
gi|167010276|ref|ZP_02275207.1| methyltransferase GidB [Francisella tularensis subsp. holarctica
FSC200]
gi|208780015|ref|ZP_03247358.1| methyltransferase GidB [Francisella novicida FTG]
gi|254366932|ref|ZP_04982969.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica 257]
gi|290954265|ref|ZP_06558886.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica URFT1]
gi|295312329|ref|ZP_06803116.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica URFT1]
gi|122325911|sp|Q0BP72|RSMG_FRATO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122501364|sp|Q2A5Y4|RSMG_FRATH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224588|sp|A7N992|RSMG_FRATF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89143337|emb|CAJ78500.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica LVS]
gi|115128925|gb|ABI82112.1| glucose-inhibited cell division protein [Francisella tularensis
subsp. holarctica OSU18]
gi|134252759|gb|EBA51853.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica 257]
gi|156252039|gb|ABU60545.1| methyltransferase/glucose inhibited cell division protein B
[Francisella tularensis subsp. holarctica FTNF002-00]
gi|208744019|gb|EDZ90320.1| methyltransferase GidB [Francisella novicida FTG]
Length = 205
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 6 SNSILRA-NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ + L+ ++ + +++ + L KW+K N+ + +++ ++H+ DS
Sbjct: 1 MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G+GGG PG++ +I + L++S KK FL+ V + +
Sbjct: 61 LAVAKYIK-GDSTVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLS 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 117 LNN--INPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|17548044|ref|NP_521446.1| glucose inhibited division protein B [Ralstonia solanacearum
GMI1000]
gi|20177886|sp|Q8XU66|RSMG_RALSO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|17430350|emb|CAD17115.1| probable methyltransferase gidb (glucose inhibited divisionprotein
b) [Ralstonia solanacearum GMI1000]
Length = 223
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------VFQLHPYPSIWI 76
L++L + L KW++ NL + D H+ DSL V ++ P S +
Sbjct: 28 QLDRLLAYQVLLAKWNRVYNLTAIRDAGDMLTHHLLDSLAAVPRIAELVRRVQPEASRVL 87
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSGGG PGI +I I V +++ KK +FL + + +++
Sbjct: 88 DVGSGGGLPGIPLAIACPDIG---VTMVDIVQKKTAFLTQCRAELGLTNAQSHWGHVEKL 144
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ VI++RA A+L+ + + L
Sbjct: 145 ADAVG-YGVITSRAFAELNDFVRLAGHLLAP 174
>gi|294788313|ref|ZP_06753556.1| 16S rRNA methyltransferase GidB [Simonsiella muelleri ATCC 29453]
gi|294483744|gb|EFG31428.1| 16S rRNA methyltransferase GidB [Simonsiella muelleri ATCC 29453]
Length = 210
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 4/159 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L++ +++ L + L KW+ NL + H+ DSL +
Sbjct: 6 EQLQSGLNAMNLDLTMPQQLLLLEYVALLKKWNSTYNLTALRDENTMISHHLLDSLTLLP 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+D+GSGGG PGI T+I + + L++S KK +FL+ V + +
Sbjct: 66 YVANAQTLMDVGSGGGMPGIPTAICRPDL---HITLLDSNTKKTTFLQQAVIELGLKNVT 122
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A EA DV+++RA A+L + + L +
Sbjct: 123 VASGRVEA-MHDKKVDVVTSRAFAELHDFIALTKHLLNE 160
>gi|254372080|ref|ZP_04987573.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. novicida GA99-3549]
gi|151569811|gb|EDN35465.1| methyltransferase glucose-inhibited cell division protein
[Francisella novicida GA99-3549]
Length = 205
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 6 SNSILRA-NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ + L+ ++ + +++ + L KW+K N+ + +++ ++H+ DS
Sbjct: 1 MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G+GGG PG++ +I + L++S KK FL+ V + +
Sbjct: 61 LAVAKYIK-GDSTVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLS 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 117 LNN--INPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|313205880|ref|YP_004045057.1| 16S rRNA m(7)g-527 methyltransferase [Riemerella anatipestifer DSM
15868]
gi|312445196|gb|ADQ81551.1| 16S rRNA m(7)G-527 methyltransferase [Riemerella anatipestifer DSM
15868]
gi|315022192|gb|EFT35220.1| Ribosomal RNA small subunit methyltransferase G [Riemerella
anatipestifer RA-YM]
gi|325336680|gb|ADZ12954.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Riemerella anatipestifer
RA-GD]
Length = 211
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
++ + +L + ++ + + L+ +W++KIN++S + + +H+ +
Sbjct: 1 MKKDLILKYFPELTEQQQHQFALLEPLYKEWNEKINVISRKDTDSLYEKHILHSLGIAKV 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G+GGGFPGI +I +E LI+S KK ++ V + +
Sbjct: 61 MPFSEGTKVLDIGTGGGFPGIPLAIMFPEVE---FTLIDSIGKKIKVVQAVSEALELKNL 117
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ A ++ + +RA+ + L +
Sbjct: 118 I--AVHGRAEKLKDKYHFVVSRAVTQMPVFLRW 148
>gi|139439863|ref|ZP_01773228.1| Hypothetical protein COLAER_02262 [Collinsella aerofaciens ATCC
25986]
gi|133774791|gb|EBA38611.1| Hypothetical protein COLAER_02262 [Collinsella aerofaciens ATCC
25986]
Length = 261
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 8/169 (4%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ + S L + + +V+ L K L L+ +K NL VED + H+ D
Sbjct: 24 QADEMLSRLTSYCKEYSLSVTDIELRKCIQHLDLVLETNKTTNLTRILNVEDAAVLHILD 83
Query: 62 --SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L + +D+G+G GFPGI +I I+S KK + V
Sbjct: 84 SLVLLPYINKAPEGALLDMGTGAGFPGIPLTI----TTHRKATYIDSVGKKVDAVNSFVH 139
Query: 120 KTAA-RGKVFACRIQEAPQ-MITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E + V++ARALA L L+EY+ P+L
Sbjct: 140 ALGLKHAHAVHDRLEEYARSHKKQFSVVTARALAPLPILVEYAAPYLRD 188
>gi|260592447|ref|ZP_05857905.1| 16S rRNA methyltransferase GidB [Prevotella veroralis F0319]
gi|260535493|gb|EEX18110.1| 16S rRNA methyltransferase GidB [Prevotella veroralis F0319]
Length = 207
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ + + N++ E E+ L+ +W+ KIN++S +++ + HV SL + + +
Sbjct: 3 DIIKKYFPNLTAEQEEQFNALNALYHEWNAKINVISRKDIDNLYEHHVLHSLAIAKFIKF 62
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D G+GGGFPGI +I LI+ KK + V + A
Sbjct: 63 CEGTNVLDFGTGGGFPGIPLAILFPEAN---FKLIDGTGKKVRVAQEVATAIGLTNILPA 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
E + D I +RA+ L L++
Sbjct: 120 HLRGEEEK--GKFDFIVSRAVMPLPDLMKI 147
>gi|256820758|ref|YP_003142037.1| methyltransferase GidB [Capnocytophaga ochracea DSM 7271]
gi|256582341|gb|ACU93476.1| methyltransferase GidB [Capnocytophaga ochracea DSM 7271]
Length = 205
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+L + ++S E+ L+ KW+ +IN++S ++DF+ RHV SL + + +
Sbjct: 2 KIILKYFPSLSELQQEQFAELKPLYEKWNAQINVISRKDIDDFYERHVLHSLAIAKRIQF 61
Query: 72 PSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ D+G+GGGFPGI +I + + L++S KK ++ VV+
Sbjct: 62 VDGTVLLDVGTGGGFPGIPLAIMFPNCQ---FTLVDSIGKKIKVVQEVVKALRLTN--VT 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A ++ T D + +RA+ + + PW+ K
Sbjct: 117 AMQIRAEELKDTYDFVVSRAVTQMKDFV----PWVKGK 150
>gi|309806385|ref|ZP_07700397.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
gi|308167216|gb|EFO69383.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
Length = 207
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSI 96
KK NL + ++ +++H DSL D+G+G GFP + I I
Sbjct: 5 KKTNLTRITEEDEVYLKHFYDSLTPIIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDI 64
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP---QMITTCDVISARALAD 152
+ + +I+S K+ +FL +V++ + R ++A ++ DV++ARA+A
Sbjct: 65 K---LTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVVTARAVAR 121
Query: 153 LDTLLEYSFPWLY 165
+ L EY P +
Sbjct: 122 MSVLSEYCLPLVK 134
>gi|311065161|ref|YP_003971887.1| methyltransferase GidB [Bifidobacterium bifidum PRL2010]
gi|310867481|gb|ADP36850.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Bifidobacterium bifidum PRL2010]
Length = 232
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 17/158 (10%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP------YPSIWID 77
E +KLE F+ + + L+ + W RH+ +S D
Sbjct: 26 EAYDKLEVFHVKLSREGELRGLIGPRDISIIWERHILNSAACVPFIREVADRSKAKTIAD 85
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-----ACRI 132
+GSGGGFPGI+ + + + LIE ++ +L+ V + I
Sbjct: 86 VGSGGGFPGIVAATCMPD---CVFTLIEPMERRVEWLQECVDDMDLQNVTIIRARSDEVI 142
Query: 133 QEAPQMIT---TCDVISARALADLDTLLEYSFPWLYQK 167
V++ RA+A + L ++ P L +
Sbjct: 143 DRIKHHEGELKPFSVVTCRAVAPMTKLAGWTLPLLRPQ 180
>gi|310830135|ref|YP_003962492.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
gi|308741869|gb|ADO39529.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
Length = 239
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWI 76
+ + + + L ++KIN+ + V++F +H+ DSL +H +
Sbjct: 15 GIAIDEKQSRLMILYMEKLLVMNEKINVTRITDVDEFIEKHLIDSLTCLKFIHKDVKSIL 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+G+GGGFPG+ ++ L E + ++++ KK + + ++ + R ++
Sbjct: 75 DVGTGGGFPGVPLAVMLPEAE---ITMMDATGKKLKVIEDICREIGIKNVEFLHGRAEDL 131
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P D I +RA+A+L L E P +
Sbjct: 132 GKDPAYREGYDCIVSRAVANLCLLSELCLPLAKK 165
>gi|225011500|ref|ZP_03701938.1| methyltransferase GidB [Flavobacteria bacterium MS024-2A]
gi|225004003|gb|EEG41975.1| methyltransferase GidB [Flavobacteria bacterium MS024-2A]
Length = 215
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 6 SNSILRANYLLNTY-----NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
+ + N L+ N+S + L + + L+ W+ KINL+S ++ F+ RHV
Sbjct: 1 MKKLSKQNISLDKLAQIFPNISEQQLNQFKLLAPLYEDWNTKINLISRKDMDSFFERHVL 60
Query: 61 D--SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ + +D+G+GGGFPGI +I LI+S KK ++ V
Sbjct: 61 HSLGIAKVMEFLPQAKVLDVGTGGGFPGIPLAILFPET---HFFLIDSIGKKIKVVQEVS 117
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + A D + +RA+ ++T + PW+ +
Sbjct: 118 NVLKLKN--VSSAHIRAEDFSEKIDFVVSRAVTKMETFV----PWVKK 159
>gi|119776786|ref|YP_929526.1| 16S rRNA methyltransferase GidB [Shewanella amazonensis SB2B]
gi|166224610|sp|A1SBV0|RSMG_SHEAM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119769286|gb|ABM01857.1| glucose-inhibited division protein B [Shewanella amazonensis SB2B]
Length = 206
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L + V + ++L F L KW+K NL S RH+ DS V
Sbjct: 4 EKLSQDLAKAGLQVDAQQQQQLLAFVALLDKWNKAYNLTSVREPAQMLTRHILDS-LVVS 62
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
H S +ID+G+G G PGI +I E L++S K+ F + V + +
Sbjct: 63 PHLVGSRFIDVGTGPGLPGIPLAIINPDKE---FVLLDSLGKRIRFQKQVAVELGLKNIS 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A + +L +
Sbjct: 120 SVESRVELYQPEQGFDGVLSRAFASVGDMLSWCHHL 155
>gi|317050326|ref|YP_004111442.1| methyltransferase GidB [Desulfurispirillum indicum S5]
gi|316945410|gb|ADU64886.1| methyltransferase GidB [Desulfurispirillum indicum S5]
Length = 203
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDLGSG 81
E L E + ++W++ L + + + + RH DS+ P ++ ID+G G
Sbjct: 14 EELLPLFELYCQELVRWNRAKKLTAITERAEVYDRHFLDSVHGVDGLLPQGALVIDIGCG 73
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMIT 140
GFPG+ + I + ++S +KK +F+R++ +K + + F R +E Q+
Sbjct: 74 AGFPGLPLKMLRPDI---HLIAVDSISKKIAFVRHMARKLGLQGVECFDRRAEELTQLHA 130
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV++ RA+AD L++ P+L Q
Sbjct: 131 KADVVTFRAVADSALLVKIGLPFLKQ 156
>gi|284034937|ref|YP_003384868.1| methyltransferase GidB [Kribbella flavida DSM 17836]
gi|283814230|gb|ADB36069.1| methyltransferase GidB [Kribbella flavida DSM 17836]
Length = 223
Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 20 NVSRET-----------LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+VSRET ++L + L L+ V W RH+ + + +L
Sbjct: 4 DVSRETPPLVEELYPGAADRLSAYAELLATEGTLRGLIGPREVPRLWDRHLLNCAVLERL 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
P S D+G+G G PGI+ ++ + V L+E ++ +FL VQ+ +V
Sbjct: 64 IPEQSSVADVGTGAGLPGIVLALVRPDL---HVALVEPLLRRTTFLEEAVQQLGCDNAEV 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R ++ P + DV+++RA+A L L + P
Sbjct: 121 VRARAEDLPP--ASFDVVTSRAVAPLGKLAGWCLPL 154
>gi|168334917|ref|ZP_02693037.1| methyltransferase GidB [Epulopiscium sp. 'N.t. morphotype B']
Length = 236
Score = 89.4 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGGFPGIIT 89
+ L L+W++K+NL + + ++ +H DSL V +D+G+G GFPG++
Sbjct: 27 YKDLLLEWNQKLNLTAITKEDEIITKHFLDSLSVNMAVDLLKYKNLVDVGTGAGFPGLVL 86
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP---QMITTCDVI 145
I + + L++S K+ +FL V++ R ++ Q D+
Sbjct: 87 KIAYPHLN---IVLVDSLKKRLTFLDAVIEILKLKHVVTVHGRAEDIAKDVQYREKFDIC 143
Query: 146 SARALADLDTLLEYSFPWLY 165
S RA+++L TL EY+ P++
Sbjct: 144 SPRAVSNLATLSEYALPFVR 163
>gi|124010468|ref|ZP_01695107.1| methyltransferase GidB [Microscilla marina ATCC 23134]
gi|123983446|gb|EAY23934.1| methyltransferase GidB [Microscilla marina ATCC 23134]
Length = 211
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 9 ILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
+ + + +L + +++ E+ L+ W++KIN+VS V+ + RHV +
Sbjct: 1 MEKLDIVLKYFPDLTDAQKEQFIKMNELYQDWNEKINVVSRKDVDMLYERHVLHSLGIAK 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
S +DLG+GGGFPG+ +I E LV+ I K ++ VV
Sbjct: 61 VIQFKPGSKVLDLGTGGGFPGVPLAIMFPKTEFYLVDSIAK---KIKVVQEVVAGLGLTN 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
++ D I +RA+A L TL +S
Sbjct: 118 --VKAEQVRVEKVDDDFDFIVSRAVAPLKTLHNWS 150
>gi|310288300|ref|YP_003939559.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Bifidobacterium bifidum S17]
gi|309252237|gb|ADO53985.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Bifidobacterium bifidum S17]
Length = 232
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 17/158 (10%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------D 77
E +KLE F+ + + L+ + W RH+ +S + D
Sbjct: 26 EAYDKLEVFHVKLSREGELRGLIGPRDISIIWERHILNSAACVPFIREVTDRSKAKTIAD 85
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-----ACRI 132
+GSGGGFPGI+ + + E LIE ++ +L+ V + I
Sbjct: 86 VGSGGGFPGIVAAACMPDCE---FTLIEPMERRVEWLQECVDDMDLQNVTIIRARSDEVI 142
Query: 133 QEAPQMIT---TCDVISARALADLDTLLEYSFPWLYQK 167
V++ RA+A + L ++ P L +
Sbjct: 143 DRIKHHEGELKPFSVVTCRAVAPMTKLAGWTLPLLRPQ 180
>gi|332639018|ref|ZP_08417881.1| 16S rRNA methyltransferase GidB [Weissella cibaria KACC 11862]
Length = 239
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVED----SLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ +NL + + ++ +++H D + L ID+G+G GFP +
Sbjct: 30 ERLVAVNEHMNLTAITERDEVYMKHFYDSLTLAWAYPALQTEELHMIDVGAGAGFPSLPL 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQM----ITTCDV 144
I ++ + +I++ NK+ +FLR +V++ V R +E DV
Sbjct: 90 KIAFPQLQ---ITIIDALNKRINFLRDLVKELGLEGVTVEHARAEEFGNKNAPAREQYDV 146
Query: 145 ISARALADLDTLLEYSFPWLY 165
+ARALA L+ L E + P++
Sbjct: 147 ATARALARLNILGELTLPFVK 167
>gi|297627569|ref|YP_003689332.1| methyltransferase gidB (glucose-inhibited division protein B)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296923334|emb|CBL57934.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 261
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ E + + + + + L+ E W RH+ + + ++ +D+GSG G
Sbjct: 71 DQFESMSGYVDILVGQGVEWGLLGPREPERIWSRHIMNCAALLEVIGEGVDVLDVGSGAG 130
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG++ +I + V L+E ++ +FL+ V + G+V A + D
Sbjct: 131 LPGLVIAIARPDLN---VTLLEPLLRRFNFLKEAVDELGLDGQVLVE-RGRAEDLKQHFD 186
Query: 144 VISARALADLDTLLEYSFPW 163
V++ RA+A L LL ++ P
Sbjct: 187 VVTCRAVARLPKLLGWTMPL 206
>gi|298208053|ref|YP_003716232.1| glucose-inhibited division protein [Croceibacter atlanticus
HTCC2559]
gi|83850694|gb|EAP88562.1| glucose-inhibited division protein [Croceibacter atlanticus
HTCC2559]
Length = 209
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ + +++ LE+ L+ W++KIN+VS +++ + RHV +
Sbjct: 2 KEIIQHFPDLTELQLEQFSKIGDLYKDWNQKINVVSRKDIDEIYSRHVLHSLGIAKVMSF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ +D+G+GGGFPGI +I ++ L++S KK + VV+ K
Sbjct: 62 KDGAKVMDVGTGGGFPGIPLAILFPEVQFH---LVDSIGKKIKVVDEVVEGLGLTNVKTS 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E D I +RA+A ++T + + +K
Sbjct: 119 HSRVEEINDT---YDFIVSRAVAHMETFTHWIKGKVAKK 154
>gi|163796496|ref|ZP_02190456.1| phosphoenolpyruvate carboxykinase [alpha proteobacterium BAL199]
gi|159178346|gb|EDP62890.1| phosphoenolpyruvate carboxykinase [alpha proteobacterium BAL199]
Length = 201
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQL 68
+ + ++L + L +KW +INLV+ +++ D W RHV DS + +
Sbjct: 1 MNQADVQAALGFDDAIGDRLAAYVALLVKWQARINLVAPASLPDVWSRHVLDSGQLARHM 60
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P +DLGSG GFPG++ +I + G + L+E+ +K +FL+ + T +
Sbjct: 61 DGKPGPVLDLGSGAGFPGLVLAI----LGRGDITLVEADRRKVAFLQEAARVTDTNVAIE 116
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
CRI+ + +++ARALA + LL Y+ P++ +
Sbjct: 117 CCRIEALRPIRAG--IVTARALASVSELLHYARPYVDK 152
>gi|134302726|ref|YP_001122694.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
tularensis WY96-3418]
gi|166224590|sp|A4J072|RSMG_FRATW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134050503|gb|ABO47574.1| Methyltransferase gidB (glucose- inhibited division protein B)
[Francisella tularensis subsp. tularensis WY96-3418]
Length = 205
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 6 SNSILRA-NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ + L+ ++ + +++ + L KW+K N+ + +++ ++H+ DS
Sbjct: 1 MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDS 60
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G+GGG PG++ +I + L++S KK FL+ V + +
Sbjct: 61 LAVAKYIK-GDSTVDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLS 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 117 LNN--INPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|257057911|ref|YP_003135743.1| glucose-inhibited division protein B [Saccharomonospora viridis DSM
43017]
gi|256587783|gb|ACU98916.1| glucose-inhibited division protein B [Saccharomonospora viridis DSM
43017]
Length = 225
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
F L + L+ V+ W RHV +S V + P + ID+GSG GFPG+ +
Sbjct: 22 EFVELLASHGVERGLIGPREVDRLWDRHVLNSAVVNERIPMGARVIDVGSGAGFPGVPLA 81
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ + L+E ++ +L VV V R +E + I DV++AR
Sbjct: 82 IARPDLD---IVLLEPMARRVEWLSEVVDTLDLPVTVERGRAEEKVVRRRIDAADVVTAR 138
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L L ++ P +
Sbjct: 139 AVAPLARLSQWCLPLVRP 156
>gi|198284889|ref|YP_002221210.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665157|ref|YP_002427569.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249410|gb|ACH85003.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517370|gb|ACK77956.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 221
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L A + + V E + L ++ L +W+ NL + + RH+ DSL V
Sbjct: 15 LNAGLVALGLDRTVGAEQRDLLIHYVALLQRWNATHNLTAVRDPLEMVPRHLLDSLAV-L 73
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +D+GSG G PGI +I + L+E K+ +FLRY +
Sbjct: 74 PYLPEGAVVDIGSGAGLPGIPLAICCPA---QAFTLVEPAAKRVAFLRYAIADLGLTNVQ 130
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + E DVI +RA A L L +
Sbjct: 131 VAPQGSEDYHPDLLPDVIISRATAPLARLDAMTRHL 166
>gi|119475230|ref|ZP_01615583.1| glucose-inhibited division protein B [marine gamma proteobacterium
HTCC2143]
gi|119451433|gb|EAW32666.1| glucose-inhibited division protein B [marine gamma proteobacterium
HTCC2143]
Length = 215
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 4/159 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
SIL + V + L ++ L +KW+K NL + + RH+ DSL V
Sbjct: 7 SILEDGINELSLTVPSAKISLLLAYHQLLVKWNKAYNLTAVRNSREMISRHLLDSLTV-A 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ + + +ID+G+G G PGI+ +I + +L++S KK FL V +
Sbjct: 66 PYLHGNRFIDIGAGAGLPGIVLAILFPERQ---FDLLDSNGKKTRFLFQVKTELGLGNIT 122
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + T + I +RA A L ++ S L
Sbjct: 123 IHHSRVEQLSVEHTYEGILSRAFASLADMVNCSGQLLAD 161
>gi|313665699|ref|YP_004047570.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
gi|312949510|gb|ADR24106.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
Length = 232
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIW 75
+ +++E KL +Y + ++ ++K NL + + + + +H DSL Q
Sbjct: 12 KNFTINQEIKNKLNLYYQILIEENQKYNLTRITELNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
D+G+G GFPG++ I +I+ + LIES NKK +FL+Y+V++ ++ R +E
Sbjct: 72 ADIGTGPGFPGVVLKIFFPNIK---LTLIESNNKKVNFLKYLVKRLNLNNVEILNKRAEE 128
Query: 135 APQ-MITTCDVISARALADLDTLLEYSFPWLY 165
D++ +RA+A LD +LE +
Sbjct: 129 LTNDYKEQFDIVISRAVAYLDIILELGVQLVK 160
>gi|218263050|ref|ZP_03477295.1| hypothetical protein PRABACTJOHN_02976 [Parabacteroides johnsonii
DSM 18315]
gi|218222983|gb|EEC95633.1| hypothetical protein PRABACTJOHN_02976 [Parabacteroides johnsonii
DSM 18315]
Length = 223
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ +++ + L+ W+ KIN++S +E+ ++ HV + S +D+
Sbjct: 28 LTDAQKLQIDALFDLYSDWNSKINVISRKDIENLYLHHVLHSLGILKMLKFKEGSTVMDI 87
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPGI +I L + LV+ I K K + + CR +E Q+
Sbjct: 88 GTGGGFPGIPLAILLPEVRFHLVDSIGKKIKVGQAVAEAIG--LKNVTFRHCRAEEEKQL 145
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQKK 168
D + +RA+ L L + + + +++
Sbjct: 146 ---FDFVVSRAVMPLADLAKIARKNIKKEQ 172
>gi|50365477|ref|YP_053902.1| glucose-inhibited methyltransferase [Mesoplasma florum L1]
gi|55976393|sp|Q6F0F5|RSMG_MESFL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50364033|gb|AAT76018.1| glucose-inhibited methyltransferase [Mesoplasma florum L1]
Length = 237
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 13 NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
+ S E +KL +Y + ++ + K NL + ED + +H DSL +
Sbjct: 9 KIFEDNLGFVPSEEIKDKLNEYYKILVEENLKYNLTRITNEEDVYEKHFLDSLLFTKETK 68
Query: 71 YPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVF 128
+ ID+G+G GFPGI+ I + + LI+S NKK +FL V++K + +
Sbjct: 69 IDNQKIIDIGTGPGFPGIVLKIFFPETD---ITLIDSNNKKINFLNIVIKKLNLKQIEAK 125
Query: 129 ACRIQEAPQMI-TTCDVISARALADLDTLLEYSFPWLY 165
R +E ++ D+ +RA+A LD +LE + +L
Sbjct: 126 HARAEELARIENEKYDIAISRAVAYLDVILELAVRFLK 163
>gi|315223893|ref|ZP_07865740.1| glucose inhibited division protein B [Capnocytophaga ochracea
F0287]
gi|314946145|gb|EFS98147.1| glucose inhibited division protein B [Capnocytophaga ochracea
F0287]
Length = 205
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+L + ++S ++ L+ KW+ +IN++S ++DF+ RHV SL + + +
Sbjct: 2 KIILKYFPSLSELQQQQFAELKPLYEKWNAQINVISRKDIDDFYERHVLHSLAIAKRIQF 61
Query: 72 PSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ D+G+GGGFPGI +I + + L++S KK ++ VV+
Sbjct: 62 VDGTVLLDVGTGGGFPGIPLAIMFPNCQ---FTLVDSIGKKIKVVQEVVKALRLTN--VT 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A ++ T D + +RA+ + + PW+ K
Sbjct: 117 AMQIRAEELKDTYDFVVSRAVTQMKDFV----PWVKGK 150
>gi|189183333|ref|YP_001937118.1| 16S rRNA methyltransferase GidB [Orientia tsutsugamushi str. Ikeda]
gi|238692233|sp|B3CQX7|RSMG_ORITI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189180104|dbj|BAG39884.1| glucose inhibited division protein B [Orientia tsutsugamushi str.
Ikeda]
Length = 198
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 62/157 (39%), Positives = 96/157 (61%), Gaps = 9/157 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPY 71
++L YNVSRET K + +Y L KW+ INLVS++T+++FW RH+ DS++ + +H
Sbjct: 7 DFLNINYNVSRETFNKFKEYYSLLSKWNSTINLVSATTLQNFWQRHIFDSIQLLNYIHNK 66
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
I DLGSG GFPG++ SI V LIES ++KA+FL V Q + + ++ R
Sbjct: 67 DIIVADLGSGAGFPGVVLSIS----GIKNVILIESDSRKAAFLLQVAQLSDQKIEIINDR 122
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPW-LYQK 167
IQ + CD+++ RALA+L T+L ++ + + K
Sbjct: 123 IQ---NLKVKCDIVTVRALANLSTILSHTKQFTVKDK 156
>gi|167753851|ref|ZP_02425978.1| hypothetical protein ALIPUT_02136 [Alistipes putredinis DSM 17216]
gi|167658476|gb|EDS02606.1| hypothetical protein ALIPUT_02136 [Alistipes putredinis DSM 17216]
Length = 207
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 11/150 (7%)
Query: 15 LLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
L++ Y +++R + E Y L+ W+ KIN++S + ++RHV SL + ++ P+
Sbjct: 4 LIDKYFPDLTRPQRGQFEALYALYADWNTKINVISRKDFDQLYLRHVLHSLSIAKVCPFA 63
Query: 73 S--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+D+G GGGFP + +I ++S KK ++ V +
Sbjct: 64 PGARVLDVGCGGGFPSVPLAILFPE---AHFTAVDSIGKKIKVVQGVAEGLGLANLTPLC 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R + P D + +RA+ ++ T + +
Sbjct: 121 ARAETLP---ERYDYVVSRAVTEMPTFVGW 147
>gi|146328718|ref|YP_001210034.1| glucose inhibited division protein GidB [Dichelobacter nodosus
VCS1703A]
gi|189039384|sp|A5EXK3|RSMG_DICNV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146232188|gb|ABQ13166.1| glucose inhibited division protein GidB [Dichelobacter nodosus
VCS1703A]
Length = 211
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+L+ ++ V++E +EKL ++ L KW++ NL + + I H+ DSL V
Sbjct: 9 EELLQRGAAALSFPVNQEVIEKLMHYLQLLAKWNRVHNLTAIREPQQQVIVHLLDSLVVA 68
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
P D+GSG G PGI+ +I + L+ES KK+ FLR V++ A
Sbjct: 69 PFLPPAQTIADIGSGAGLPGIVLAIVCPQQQFF---LVESNTKKSVFLREAVRQLALENV 125
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E + +V+ +RA++D+++ L ++
Sbjct: 126 KVVAMRAEQWRPEAKLNVLISRAVSDINSFLMWTAAL 162
>gi|294675619|ref|YP_003576234.1| methyltransferase GidB [Rhodobacter capsulatus SB 1003]
gi|294474439|gb|ADE83827.1| methyltransferase GidB [Rhodobacter capsulatus SB 1003]
Length = 196
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGG 82
+ + L KW+ INLVS T+ + W RH DS ++ + + DLGSGG
Sbjct: 5 KQFNASSGWKALLKKWNPAINLVSPRTLVEVWTRHFLDSAQILRSVDHAPQHWADLGSGG 64
Query: 83 GFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFPG++ + + L+ES +KA+FL V+ V RI+ +
Sbjct: 65 GFPGLVVGVLAKEQFPDMRLTLVESDKRKAAFLLNAVRDLGLSAVVADKRIESLEPL--K 122
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
DV+SARALA L+TLL Y+ L
Sbjct: 123 ADVLSARALAPLETLLAYAERHLSP 147
>gi|221069724|ref|ZP_03545829.1| methyltransferase GidB [Comamonas testosteroni KF-1]
gi|220714747|gb|EED70115.1| methyltransferase GidB [Comamonas testosteroni KF-1]
Length = 219
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 16/160 (10%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---- 73
+++ ++ L F L KW+K NL S ++ H+ DSL
Sbjct: 17 KLDLAPAQIDLLMSFMDLLQKWNKVYNLTSVRDPQEMLTHHLLDSLAAVPALLRHVSSLR 76
Query: 74 -------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSGGG PG++ +I I+ VN +++ KKA+F++ V
Sbjct: 77 VEEGKRLPLLDVGSGGGLPGVVFAICCPQID---VNCVDTVGKKAAFIQQVAASLRLPN- 132
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T VIS RA A L +S L +
Sbjct: 133 -LRGIHDRVENLKTQYPVISCRAFASLVDFTTWSRKALAE 171
>gi|306834794|ref|ZP_07467858.1| 16S rRNA methyltransferase GidB [Corynebacterium accolens ATCC
49726]
gi|304569322|gb|EFM44823.1| 16S rRNA methyltransferase GidB [Corynebacterium accolens ATCC
49726]
Length = 202
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + V W RH+ + + Q+ P + ID+GSG G PGI
Sbjct: 18 QEYHDSLATDGSTRGFIGPREVPRLWERHILNCAVIEQVIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVIS 146
+I + + LIE K+ ++L V +K V R +E + + DV++
Sbjct: 78 AIARPDL---HITLIEPLLKRYNYLNEVTEKLGLENVTVRRGRAEEGPIKKAVAGADVVT 134
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 135 SRAVAPLGKLAKWSLPLVRK 154
>gi|326336195|ref|ZP_08202367.1| glucose inhibited division protein B [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691704|gb|EGD33671.1| glucose inhibited division protein B [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 203
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
LL + ++ + + + L+ W+ +IN++S +E F + H+ +
Sbjct: 2 ELLLKYFPELTPKQIAQYTEAISLYKDWNTRINVISRKDMEHFVLHHLLHSLGIAKICSF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+GGGFPGI +I +L++S KK ++ V + +
Sbjct: 62 ESGIKVLDVGTGGGFPGIPLAILYPE---VSFHLVDSIGKKIKVVQEVANALSLTNVTYQ 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + D I +RA+ +D + + L
Sbjct: 119 QVRVET--LEGQYDYIVSRAVTQMDDFYKLTKHLLKP 153
>gi|313683293|ref|YP_004061031.1| 16S rRNA m(7)g-527 methyltransferase [Sulfuricurvum kujiense DSM
16994]
gi|313156153|gb|ADR34831.1| 16S rRNA m(7)G-527 methyltransferase [Sulfuricurvum kujiense DSM
16994]
Length = 192
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 13 NYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
LL YNVS + EK+E + L KW+K NL + T++ + D++ P
Sbjct: 5 KQLLAQYNVSVNEDFFEKIEQYKTLLEKWNKIHNLTGAKTLQQI-DAFIVDAVIPITFLP 63
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G+G GFPG+I +I + L+E +K+ASFL++V
Sbjct: 64 SVKKAMDIGTGAGFPGMILAIAMPQT---HFTLVEPLSKRASFLQFVKADLGLENVDVKA 120
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + D+I++RA+ D + LL+ S P+ +
Sbjct: 121 LRAEQLK-SEPYDLITSRAVTDTEMLLKLSEPFCRE 155
>gi|148284582|ref|YP_001248672.1| glucose-inhibited division protein B [Orientia tsutsugamushi str.
Boryong]
gi|189045871|sp|A5CDU7|RSMG_ORITB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146740021|emb|CAM80105.1| glucose inhibited division protein [Orientia tsutsugamushi str.
Boryong]
Length = 198
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/157 (38%), Positives = 95/157 (60%), Gaps = 9/157 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPY 71
++L YNVSRET K + +Y L KW+ INLVS++T+++FW RH+ DS++ + +H
Sbjct: 7 DFLNINYNVSRETFNKFKEYYSLLSKWNSTINLVSATTLQNFWQRHIFDSIQLLNYIHNK 66
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
I DLGSG GFPG++ SI V LIES ++KA+FL Q + + ++ R
Sbjct: 67 DIIVADLGSGAGFPGVVLSIS----GIKNVILIESDSRKAAFLLQAAQLSDQKIEIINDR 122
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPW-LYQK 167
IQ + CD+++ RALA+L T+L ++ + + K
Sbjct: 123 IQ---NLKVKCDLVTVRALANLSTILSHTKQFTVKDK 156
>gi|257095886|ref|YP_003169527.1| methyltransferase GidB [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048410|gb|ACV37598.1| methyltransferase GidB [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 215
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S +KL + L KW++ L + S H+ DSL + P + +D
Sbjct: 15 GIALSAPAQQKLLAYATLLAKWNRTYRLTAMSDPALAVSHHLLDSLALLPFVEAPPL-LD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I + V L++S +KKA+FL+ V + C EA +
Sbjct: 74 VGSGGGMPGIPLAIARPDLP---VVLLDSSSKKAAFLQQVAIELGLGNIAVHCGRVEAYR 130
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
T I+ARA + L ++ S L +
Sbjct: 131 PTTGFAAITARAFSHLAEFVQLSRHLLAE 159
>gi|296118599|ref|ZP_06837177.1| 16S rRNA methyltransferase GidB [Corynebacterium ammoniagenes DSM
20306]
gi|295968498|gb|EFG81745.1| 16S rRNA methyltransferase GidB [Corynebacterium ammoniagenes DSM
20306]
Length = 207
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ L + V W RH+ + + ++ + +D+GSG G PGI
Sbjct: 23 EKYHDLLATDGSTRGFIGPREVPRLWDRHLINCAVITEVMDQGATVVDVGSGAGLPGIPV 82
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVIS 146
+I ++ + LIE K++ FL+ VV V R +E + + D+++
Sbjct: 83 AIARPDLK---ITLIEPLLKRSVFLQEVVDALELDNVTVIRGRAEEGPVKKAVAGADIVT 139
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 140 SRAVAPLGKLAKWSLPLVRR 159
>gi|293602668|ref|ZP_06685109.1| glucose-inhibited cell division protein B [Achromobacter piechaudii
ATCC 43553]
gi|292818859|gb|EFF77899.1| glucose-inhibited cell division protein B [Achromobacter piechaudii
ATCC 43553]
Length = 237
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 13/157 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP------- 70
V KL + +W++ NL + + I+H+ DSL
Sbjct: 24 GLAVDDAAKAKLLNYLAQMQRWNRTYNLTAIRDPQQMLIQHLFDSLSAVAPFCEALGASG 83
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+ D+GSGGG PG++ +I + V I++ KK +F+R + + +
Sbjct: 84 TSAKVYDVGSGGGLPGVVLAIMQPAW---SVTCIDAVEKKTAFVRQMSGALSLPNLQARH 140
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ CD++++RA A LD + + +
Sbjct: 141 ARIETLEP--AECDIVTSRAFASLDDFAQLAGRHVRN 175
>gi|163787556|ref|ZP_02182003.1| glucose-inhibited division protein B [Flavobacteriales bacterium
ALC-1]
gi|159877444|gb|EDP71501.1| glucose-inhibited division protein B [Flavobacteriales bacterium
ALC-1]
Length = 208
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLH 69
+L + +++ + + E L+ W+ KIN+VS +++ ++RHV SL +
Sbjct: 2 KLILKYFPDLTETQINQFEALEGLYKDWNAKINVVSRKDIDELYLRHVLHSLAIAKVIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +D+G+GGGFPG+ +I + + LV+ I K K + ++ T +
Sbjct: 62 KDNSSILDVGTGGGFPGVPLAILFPNCKFHLVDSINKKLKVIDAVCEAIELTNVKTT--- 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ T D I +RA+ + ++ + +K+
Sbjct: 119 --HSRVEAIDETFDFIVSRAVTAMPEFTKWVKGKIAKKQ 155
>gi|332705995|ref|ZP_08426068.1| 16S rRNA m(7)G-527 methyltransferase [Lyngbya majuscula 3L]
gi|332355255|gb|EGJ34722.1| 16S rRNA m(7)G-527 methyltransferase [Lyngbya majuscula 3L]
Length = 248
Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYPSIWIDLG 79
E + + Y L ++++NL + E+FW +H+ DS ++Q ID+G
Sbjct: 28 EQQQLFQKLYEGILSGNRQLNLTRITAPEEFWEKHLWDSLVGLAPIWQSITPGQRIIDIG 87
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACRIQEA 135
+G GFPG+ +I + + L++S KK +FL+ ++ + A I +
Sbjct: 88 TGAGFPGLPVAIAFPNT---AITLLDSTRKKITFLQTLIPQLEINNVTTLVGRAEAIGQK 144
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q + D+ RA++ EY+ P L Q
Sbjct: 145 QQHRHSYDIALVRAVSAPSVCAEYALPLLKQ 175
>gi|325284181|ref|YP_004256722.1| Ribosomal RNA small subunit methyltransferase G [Deinococcus
proteolyticus MRP]
gi|324315990|gb|ADY27105.1| Ribosomal RNA small subunit methyltransferase G [Deinococcus
proteolyticus MRP]
Length = 255
Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ ++ Y L+ S ++NL + + D ++H D + +DL
Sbjct: 35 LTSAQTKQFAGLYGRLLEGSAQMNLTALQSERDIVLKHFVDSLGCLNAGEWATGAAVLDL 94
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA--- 135
G+G GFP + +I + + +++ KK +F+ Q + R +E
Sbjct: 95 GTGAGFPALPLAIVRPDLR---ITALDATAKKVAFVERTAQALGLAVQGLTGRAEEVGRD 151
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
PQ DV+ RA+A L L E + P L
Sbjct: 152 PQHRGAYDVVVTRAVAALPVLAELALPLLKP 182
>gi|220936470|ref|YP_002515369.1| glucose-inhibited division protein B [Thioalkalivibrio sp.
HL-EbGR7]
gi|219997780|gb|ACL74382.1| glucose-inhibited division protein B [Thioalkalivibrio sp.
HL-EbGR7]
Length = 210
Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 6/137 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L +W+K NL + + H+ DSL V D+GSG G PGI
Sbjct: 29 LGAYLELLARWNKAYNLTAVTEPRQMVTHHLLDSLAVLPWIRGS-RIADIGSGAGLPGIP 87
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISA 147
+I + V L+++ KK F + + + R++ D + +
Sbjct: 88 LAIARPEL---TVVLVDTVGKKVRFQKQAILELGLVNASAVHARVENYRP-EEPFDTVIS 143
Query: 148 RALADLDTLLEYSFPWL 164
RA A + + +
Sbjct: 144 RAFAATADFVALAGHLV 160
>gi|297572338|ref|YP_003698112.1| methyltransferase GidB [Arcanobacterium haemolyticum DSM 20595]
gi|296932685|gb|ADH93493.1| methyltransferase GidB [Arcanobacterium haemolyticum DSM 20595]
Length = 216
Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L F L + L+ + W RH+ +S + P + +D+GSG GFPG++
Sbjct: 29 LLRFGELLESEGELRGLIGPRERDKLWSRHILNSTAIVDFLPQNASLVDVGSGAGFPGLV 88
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I + VNL++S ++ +L YVV + E + + DV +AR
Sbjct: 89 AAIIRPDL---TVNLVDSLGRRTDWLSYVVDDLQLSNVTVHNKRAEEMVGVISADVATAR 145
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L LL ++ P +
Sbjct: 146 AVAALKKLLPWTMPLVRP 163
>gi|303235753|ref|ZP_07322360.1| 16S rRNA methyltransferase GidB [Prevotella disiens FB035-09AN]
gi|302484200|gb|EFL47188.1| 16S rRNA methyltransferase GidB [Prevotella disiens FB035-09AN]
Length = 208
Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDL 78
++ + E+ Y L++ W+ KIN++S +E+ + HV SL + F + +D
Sbjct: 12 LTNKQQEQFAALYDLYVDWNSKINVISRKDIENLYEHHVLHSLAIAKFINFQDDTNVLDF 71
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPGI +I + LI+ KK V + + E +
Sbjct: 72 GTGGGFPGIPLAIMFPNAN---FKLIDGTGKKIKVANEVANAIGLENVLPQHKRGEEEK- 127
Query: 139 ITTCDVISARALADLDTLLEY 159
D I +RA+ L L+
Sbjct: 128 -GKFDFIVSRAVMPLPDLMRI 147
>gi|194335474|ref|YP_002017268.1| methyltransferase GidB [Pelodictyon phaeoclathratiforme BU-1]
gi|226725360|sp|B4SC71|RSMG_PELPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|194307951|gb|ACF42651.1| methyltransferase GidB [Pelodictyon phaeoclathratiforme BU-1]
Length = 228
Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYPSIWIDLGSGG 82
TL++L + +W+ KINL+S I+H+ S + ++ +DLG+GG
Sbjct: 26 TLQQLARYGDCLERWNHKINLISRKEDAPVIIKHIFHSLLITLYHSFREGEDVLDLGTGG 85
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITT 141
G PGI S+ L+++ KK + + ++ + + R++E ++
Sbjct: 86 GLPGIPLSLLFPRTR---FLLVDATGKKIAACQAMITELGINNAIALHTRVEELKGVV-- 140
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
D + +R +A LD L YS P L
Sbjct: 141 FDTVLSRQVAPLDKLCSYSAPLLK 164
>gi|299531162|ref|ZP_07044574.1| 16S rRNA methyltransferase GidB [Comamonas testosteroni S44]
gi|298720865|gb|EFI61810.1| 16S rRNA methyltransferase GidB [Comamonas testosteroni S44]
Length = 220
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 16/160 (10%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++ ++ L F L KW+K NL S ++ H+ DSL
Sbjct: 17 KLELAPAQIDLLMSFMDLLQKWNKVYNLTSVRDPQEMLTHHLLDSLAAVPALLRHVNCLP 76
Query: 76 ---------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSGGG PG++ +I I+ VN +++ KKA+F++ V
Sbjct: 77 QEEGKRLPLLDVGSGGGLPGVVFAICCPQID---VNCVDTVGKKAAFIQQVAASLRLPN- 132
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T VIS RA A L +S L
Sbjct: 133 -LRGIHDRVENLKTRYPVISCRAFASLVDFTTWSRKALAD 171
>gi|229495898|ref|ZP_04389624.1| 16S rRNA methyltransferase GidB [Porphyromonas endodontalis ATCC
35406]
gi|229317211|gb|EEN83118.1| 16S rRNA methyltransferase GidB [Porphyromonas endodontalis ATCC
35406]
Length = 213
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
V+ + E+ + L+ W+ KIN++S +++ ++ HV + S ID+
Sbjct: 17 VNEQQREQFAALWELYTDWNSKINVISRKDIDNLYMHHVLHSLGVTKMLHFTAGSHVIDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
G+GGGFPGI +I ++ L++S KK + V RI+E
Sbjct: 77 GTGGGFPGIPLAILFPEVQ---FTLVDSIGKKVRVAQSVADSLGLQNVTTHHIRIEE--- 130
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ CD + RA L L++ + ++
Sbjct: 131 LREKCDFVVTRATMLLGELVKLTRHLFSRE 160
>gi|284038937|ref|YP_003388867.1| methyltransferase GidB [Spirosoma linguale DSM 74]
gi|283818230|gb|ADB40068.1| methyltransferase GidB [Spirosoma linguale DSM 74]
Length = 209
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
+ + +L + N++ E E+ L+ W+ KIN++S ++ + +H+ +
Sbjct: 1 MNIDLILKYFPNLTAEQKEQFAALDGLYRDWNAKINVISRQDIDALYEKHILHSLGIAKI 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G+GGGFPGI +I + LV+ I K K + + T A+ +
Sbjct: 61 VSFKPGTEILDVGTGGGFPGIPLAILFPMADFHLVDSIGKKIKVVQEVSDALGLTNAKAE 120
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEY 159
Q+ TT D + +RA+ L L +
Sbjct: 121 QI-----RVEQLNTTYDFVVSRAVTRLKPFLGW 148
>gi|171462844|ref|YP_001796957.1| methyltransferase GidB [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192382|gb|ACB43343.1| methyltransferase GidB [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 222
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED-----SLRVFQLHPYP 72
+S + LE F +W++ N + +D H+ D + L+
Sbjct: 14 GLELSLANIADLELFLQEMGRWNRVHNFTAIEGEKDSVRLHLIDSIAVLPVLRRFLNEAS 73
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
DLGSGGG P I +I ++LIE+ KK +FL++V K +
Sbjct: 74 PRIADLGSGGGLPAIPIAIIQPEWR---LSLIEAIRKKTAFLQHVRGKLKLKNIEVLSER 130
Query: 133 QEA--PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA Q D + +RA +L LE S P L
Sbjct: 131 AEAVAAQQSGQYDAVISRAFTNLARFLELSLPLLKP 166
>gi|159027599|emb|CAO86971.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 225
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 14 YLLNTYNVSRETLE---------KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
L +++ +ETLE + + Y L L+ +++ NL + E+FW +H+ DSL
Sbjct: 2 ILPELFDLWQETLEWQPDGARQARFQQLYELILEGNQRFNLTRITQPEEFWEKHLWDSLS 61
Query: 65 VFQLHPYPSIW--------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
IDLG+G GFPG+ +I S V L++S KK +FL
Sbjct: 62 GLAWLQKSQPDLLTKPLSVIDLGTGAGFPGLPIAIAYSHW---SVTLLDSTQKKINFLEE 118
Query: 117 VVQKTAARGKV----FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V+ K A + + + D++ RA+ ++D + Y+ P+L +
Sbjct: 119 VIDKLELNNTKTRLGRAEIVGKNLKHNCAYDIVCLRAVGNVDICVNYALPFLKK 172
>gi|255324012|ref|ZP_05365137.1| 16S rRNA methyltransferase GidB [Corynebacterium tuberculostearicum
SK141]
gi|255298869|gb|EET78161.1| 16S rRNA methyltransferase GidB [Corynebacterium tuberculostearicum
SK141]
Length = 202
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + V W RH+ + V Q P + ID+GSG G PGI
Sbjct: 18 QAYHDSLATDGSTRGFIGPREVPRLWERHIINCAVVKQAIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVIS 146
+I ++ + LIE K+ ++L VV++ V R +E + + DV++
Sbjct: 78 AIARPDLQ---ITLIEPLLKRYNYLNEVVEELGLDNVTVLRGRAEEGPIKKAVAGADVVT 134
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 135 SRAVAPLGKLAKWSLPLVRK 154
>gi|257463657|ref|ZP_05628048.1| glucose inhibited division protein B [Fusobacterium sp. D12]
gi|317061207|ref|ZP_07925692.1| glucose inhibited division protein B [Fusobacterium sp. D12]
gi|313686883|gb|EFS23718.1| glucose inhibited division protein B [Fusobacterium sp. D12]
Length = 234
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L ++ + +E L + L L++++ NL + + +H+ DSL +
Sbjct: 1 MKEYLTTALQKWNISLEEKQIEALLSYVSLLLEYNRHTNLTAIREEKAVLEKHILDSLLL 60
Query: 66 FQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P ID+G+G GFPG++ +I ++ L++ + K K ++
Sbjct: 61 QEFIPKEAKTAIDIGTGAGFPGMVLAICNPHLQFTLMDSVGKKTKFLEVVKE--HLQLEN 118
Query: 125 GKVFACRIQEAPQM---ITTCDVISARALADLDTLLEYSFPWLY 165
+V R ++ Q+ D+ R ++ L +LEY P+L
Sbjct: 119 VEVVNARAEDYIQISKRREYYDLGFCRGVSKLAVILEYMIPFLK 162
>gi|254282174|ref|ZP_04957142.1| methyltransferase GidB [gamma proteobacterium NOR51-B]
gi|219678377|gb|EED34726.1| methyltransferase GidB [gamma proteobacterium NOR51-B]
Length = 215
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 4/147 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
N+ + ++L + L L+W++ NL + +RH+ D+ V ID
Sbjct: 17 NLNLVQSQFDQLLDYVDLMLRWNRAYNLTAVREKGSMVVRHLLDA-LVISPLLQGKRLID 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PG+ +I L++ KK FL V + + E +
Sbjct: 76 VGTGPGIPGVPLAIVQPE---RHFTLLDGNGKKTRFLFQVKSQLGLSNIEIVEQRVENFR 132
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ D + RA ADL T +
Sbjct: 133 PHDSFDAVITRAFADLATGCRVCGHLM 159
>gi|159045996|ref|YP_001534790.1| methyltransferase GidB [Dinoroseobacter shibae DFL 12]
gi|189039385|sp|A8LPC4|RSMG_DINSH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157913756|gb|ABV95189.1| methyltransferase GidB [Dinoroseobacter shibae DFL 12]
Length = 195
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDLGSGGGFPG 86
L+ F L KWS +INLV+ ST + W RH+ DS +++ IDLGSGGG P
Sbjct: 8 DLKVFERLIRKWSPRINLVAPSTYDQTWERHILDSAQLYDFLPSTADKVIDLGSGGGLPV 67
Query: 87 IITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
++ + IES +K +FLR ++ V RI+ A + +VI
Sbjct: 68 VVLGVLAKHRGCRIKFTAIESDARKCAFLRTAARELQINLSVITSRIEAAN--VEPGNVI 125
Query: 146 SARALADLDTLLEYSFPW 163
+ARALA + LLE++ P
Sbjct: 126 TARALAPVSKLLEFAEPL 143
>gi|302346583|ref|YP_003814881.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica ATCC
25845]
gi|302150647|gb|ADK96908.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica ATCC
25845]
Length = 207
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 11/156 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
I++ + ++ + E+ L+ W+ KIN++S +++ + H+ SL +
Sbjct: 1 MIEIIKKYFPQ----LTPKQEEQFAALDALYHDWNAKINVISRKDIDNLYEHHILHSLAI 56
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D G+GGGFPG+ +I LI+ KK + V
Sbjct: 57 AKCINFREGTNVLDFGTGGGFPGVPLAIFFPEAN---FKLIDGTGKKVRVAQEVADAIGL 113
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + E + D I +RA+ L L++
Sbjct: 114 ENVLPSHLRGEEEK--GKFDFIVSRAVMPLPDLMKI 147
>gi|326573109|gb|EGE23078.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis CO72]
Length = 225
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
++ ++ + L W K NL + + ++ ++H+ D + + + P+ +
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G G P +I +I ++ ++S KK F+R + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDW---HIDALDSNQKKIRFIRQISSEIGLKNITPIASRI 143
Query: 133 QEAP-QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q T DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGTYDVITSRAFASLTDFVSLATPCLAD 178
>gi|189040865|sp|A1AVB2|RSMG_RUTMC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 203
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+S +L L + E + KL + L +KW+K NL + T+E +H+ DSL
Sbjct: 1 MNSEVLLIEGASLMNIKLESEQISKLMNYLKLIIKWNKSYNLSAIRTMEKGVYKHLLDSL 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V S+ +D+GSG G PGI+ SI + LV ++++ KK F+++ +
Sbjct: 61 SVIAYIKDKSL-LDVGSGAGLPGIVISIMRPEL---LVTVLDTVGKKCRFMQFAKTQLQL 116
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ E Q+ + I +RA + ++ +L+ + L
Sbjct: 117 KNLNVIKNRVENYQIEFCFEQIISRAFSKVEKILKLTQHLL 157
>gi|296113034|ref|YP_003626972.1| methyltransferase GidB [Moraxella catarrhalis RH4]
gi|295920728|gb|ADG61079.1| methyltransferase GidB [Moraxella catarrhalis RH4]
gi|326571191|gb|EGE21215.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis BC7]
Length = 225
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
++ ++ + L W K NL + + ++ ++H+ D + + + P+ +
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G G P +I +I ++ ++S KK F+R + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDW---HIDALDSNQKKIRFIRQISSEIGLKNITPIASRI 143
Query: 133 QEAP-QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q T DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGTYDVITSRAFASLTDFVSLATPCLAD 178
>gi|270158241|ref|ZP_06186898.1| methyltransferase GidB [Legionella longbeachae D-4968]
gi|289163503|ref|YP_003453641.1| glucose inhibited division protein B GidB [Legionella longbeachae
NSW150]
gi|269990266|gb|EEZ96520.1| methyltransferase GidB [Legionella longbeachae D-4968]
gi|288856676|emb|CBJ10487.1| putative glucose inhibited division protein B GidB [Legionella
longbeachae NSW150]
Length = 208
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + FL KW+ NL + VE +H+ DSL + + ID+G+G G PGI
Sbjct: 27 LSDYLFLLNKWNAAYNLTAIRDVEAMVGKHILDSLAILPW-LKGNRIIDVGTGAGLPGIP 85
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
++ I L++S KK FL V ++ E D + +R
Sbjct: 86 LALAKPEIN---FVLLDSNGKKTRFLNEVKRQLNLENLEIVQIRVENYHPTQGFDTVLSR 142
Query: 149 ALADLDTLLEYSFPWLYQK 167
A + L +++++ + +
Sbjct: 143 AFSSLGQMIQWTRHLIADE 161
>gi|91762516|ref|ZP_01264481.1| Glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718318|gb|EAS84968.1| Glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 213
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVED--FWIRHVEDSL 63
I + LL NV RETL + F + ++KIN++S T ++ RH+ DS
Sbjct: 1 MEEIFKNYPLLKNQNVPRETLIDFDLFISMLQTENEKINIISKETAKNKVIRDRHIIDSA 60
Query: 64 RVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKT 121
++ + SI D+GSGGG PGII SI + + + V+L E + K+SFLR V +
Sbjct: 61 QIIEFVDLNSSIITDIGSGGGMPGIIISIMIKNQKNSTKVHLYEKSHHKSSFLRKVSRDL 120
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+V I EA + + I ARA L +L+
Sbjct: 121 KLNTEVMQENIFEAENLDSGT--IMARAFKPLPIILDL 156
>gi|284049395|ref|YP_003399734.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
gi|283953616|gb|ADB48419.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
Length = 237
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWI 76
+ +S + L++ + L L+ +K +NL + + E+ ++H+ DSL V+ + +
Sbjct: 15 GFTLSEKQLDQFTRYADLLLETNKSLNLTAITDPEEVAVKHMVDSLLVYDPERFHNHTIV 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+G+G GFPG+ I + V LI+S K+ +FL VV+ + + R ++A
Sbjct: 75 DVGTGAGFPGLPLKIYDPGMR---VTLIDSLQKRLNFLEQVVKDLGLGQVRCTHARAEDA 131
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLY 165
P + DV ARA+A L L EY P +
Sbjct: 132 GKDPALREKFDVAVARAVAALPVLAEYCLPLVR 164
>gi|291455686|ref|ZP_06595076.1| 16S rRNA methyltransferase GidB [Bifidobacterium breve DSM 20213]
gi|291382614|gb|EFE90132.1| 16S rRNA methyltransferase GidB [Bifidobacterium breve DSM 20213]
Length = 221
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 15/153 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP------YPSIWIDLG 79
L +LE F+ + + L+ V+ W RH+ +S + D+G
Sbjct: 19 LPRLERFHDKLSQEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRKATDGARFRTVADVG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
SGGGFPG++T+ L LIE ++ +L V + R E
Sbjct: 79 SGGGFPGLVTACCLPE---CSFTLIEPMERRVEWLAECVDLMGLKNVSIIRGRSDEVINR 135
Query: 139 ITT-----CDVISARALADLDTLLEYSFPWLYQ 166
+ V++ RA+A + L ++ P L
Sbjct: 136 VRKREMHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|153206162|ref|ZP_01945425.1| methyltransferase GidB [Coxiella burnetii 'MSU Goat Q177']
gi|212217718|ref|YP_002304505.1| 16S rRNA methyltransferase GidB [Coxiella burnetii CbuK_Q154]
gi|226796821|sp|B6J8V2|RSMG_COXB1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120577292|gb|EAX33916.1| methyltransferase GidB [Coxiella burnetii 'MSU Goat Q177']
gi|212011980|gb|ACJ19360.1| methyltransferase [Coxiella burnetii CbuK_Q154]
Length = 204
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
L+ V ET+++ + F KW++ NL + + ++ H+ DSL
Sbjct: 1 MTEKLKQGIDQLGLKV-PETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLS 59
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 60 I-LPYLKGDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKIT 115
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q D I+ RAL + ++E + L
Sbjct: 116 NVTIIQERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLRP 157
>gi|118471658|ref|YP_891133.1| methyltransferase GidB [Mycobacterium smegmatis str. MC2 155]
gi|189045863|sp|A0R7J5|RSMG_MYCS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118172945|gb|ABK73841.1| methyltransferase GidB [Mycobacterium smegmatis str. MC2 155]
Length = 235
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE E + + + L+ V+ W RH+ +S + +L D+GSG G P
Sbjct: 21 LEAAELYARILAGAGVEWGLLGPREVDRVWERHILNSAALGELMEPGERVADIGSGAGLP 80
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ--EAPQMITTCD 143
GI ++ I V LIE +++ FLR V + V R + E + D
Sbjct: 81 GIPLALARPDI---HVTLIEPLLRRSEFLRETVTELGLDVTVVRGRAEDREVRDRVGEMD 137
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
V+++RA+A LD L +S P+L
Sbjct: 138 VVTSRAVASLDKLTRWSVPFLRD 160
>gi|326560412|gb|EGE10794.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 7169]
gi|326564015|gb|EGE14260.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 103P14B1]
gi|326576131|gb|EGE26047.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 101P30B1]
gi|326577084|gb|EGE26978.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis O35E]
Length = 225
Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
++ ++ + L W K NL + + ++ ++H+ D + + + P+ +
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G G P +I +I ++ ++S KK F+R + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDW---HIDALDSNQKKIRFIRQISSEIGLKNITPIASRI 143
Query: 133 QEAP-QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGAYDVITSRAFASLTDFVSLATPCLAD 178
>gi|332665463|ref|YP_004448251.1| ribosomal RNA small subunit methyltransferase G [Haliscomenobacter
hydrossis DSM 1100]
gi|332334277|gb|AEE51378.1| Ribosomal RNA small subunit methyltransferase G [Haliscomenobacter
hydrossis DSM 1100]
Length = 208
Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 15 LLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPY 71
+L+ + N+S + + L+ +W+ KIN+VS ++ + H+ +
Sbjct: 4 ILDYFPNLSAQQQAQFAQLDALYREWNAKINVVSRKDIDSLYAHHILHSLGIAKVINFKP 63
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ +D+G+GGG PGI +I + L++ KK ++ +VQ
Sbjct: 64 GAEILDIGTGGGLPGIPLAIVFPETQ---FTLVDGTGKKILVVKEIVQALGLSNVDAHHA 120
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E + D RA+ LD L +S+P + +K+
Sbjct: 121 RAEELKR---QFDFTVCRAVTTLDKLCAWSWPLIKRKQ 155
>gi|326561363|gb|EGE11719.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 46P47B1]
Length = 224
Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
++ ++ + L W K NL + + ++ ++H+ D + + + P+ +
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G G P +I +I ++ ++S KK F+R + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDW---HIDALDSNQKKIRFIRQISSEIGLKNITPIASRI 143
Query: 133 QEAP-QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGAYDVITSRAFASLTDFVSLATPCLAD 178
>gi|264676174|ref|YP_003276080.1| methyltransferase GidB [Comamonas testosteroni CNB-2]
gi|262206686|gb|ACY30784.1| methyltransferase GidB [Comamonas testosteroni CNB-2]
Length = 220
Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 16/160 (10%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++ ++ L F L KW+K NL S ++ H+ DSL
Sbjct: 17 KLELAPAQIDLLMSFMDLLQKWNKVYNLTSVRDPQEMLTHHLLDSLAAVPALLRHVNRLP 76
Query: 76 ---------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSGGG PG++ +I I+ VN +++ KKA+F++ V
Sbjct: 77 LEEGKRLPLLDVGSGGGLPGVVFAICCPQID---VNCVDTVGKKAAFIQQVAAALRLPN- 132
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T VIS RA A L +S L +
Sbjct: 133 -LRGIHDRVENLKTRYPVISCRAFASLVDFTTWSRKALAE 171
>gi|291303912|ref|YP_003515190.1| methyltransferase GidB [Stackebrandtia nassauensis DSM 44728]
gi|290573132|gb|ADD46097.1| methyltransferase GidB [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 18/161 (11%)
Query: 20 NVSRET-------------LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+VSRET + E + L L+ V W RH+ + +
Sbjct: 3 DVSRETAAVDKATAVFSTRMPLAEKYAELLADDGVTRGLIGPREVPRLWERHLLNCAVLG 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+L + +D+GSG G PG++ +I +V L+E ++ FL +
Sbjct: 63 ELIEPEADVLDIGSGAGLPGLVLAIVRPD---VVVTLVEPMARRTEFLTEATEALGLDNV 119
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V R +E DV+++RA+A L L + P
Sbjct: 120 EVLRARAEEVKP-RGRADVVTSRAVAPLGKLSHWCLPLARP 159
>gi|311741704|ref|ZP_07715526.1| 16S rRNA methyltransferase GidB [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303225|gb|EFQ79306.1| 16S rRNA methyltransferase GidB [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 202
Score = 88.2 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + V W RH+ + V Q P + ID+GSG G PGI
Sbjct: 18 QAYHDSLATDGSTRGFIGPREVPRLWDRHIINCAVVKQAIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVIS 146
+I ++ + LIE K+ ++L VV++ V R +E + + DV++
Sbjct: 78 AIARPDLQ---ITLIEPLLKRYNYLNEVVEELGLDNVTVLRGRAEEGPIKKAVAGADVVT 134
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 135 SRAVAPLGKLAKWSLPLVRK 154
>gi|165918741|ref|ZP_02218827.1| methyltransferase GidB [Coxiella burnetii RSA 334]
gi|165917569|gb|EDR36173.1| methyltransferase GidB [Coxiella burnetii RSA 334]
Length = 204
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
L+ V ET+++ + F KW++ NL + + ++ H+ DSL
Sbjct: 1 MTEKLKQGIDQLGLKV-PETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLS 59
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 60 I-LPYLKGDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKIT 115
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q D I+ RAL + ++E + L
Sbjct: 116 NVTIIQERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLRP 157
>gi|83596028|gb|ABC25386.1| methyltransferase [uncultured marine bacterium Ant39E11]
Length = 218
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDL 78
+++E +E+L+ L+ +W+ +IN++S +E W RH+ SL + +DL
Sbjct: 17 LTKEAIEQLQRLPNLYKEWNSRINVISRKDMELLWERHIFHSLTLGLAADFQPDMNVLDL 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPGI +I S++ L + + K + + + + RI+ ++
Sbjct: 77 GTGGGFPGIPLAIAFPSVQWTLNDSMAKKIRVVQAVSEAMA--IPNISAYHGRIE---KL 131
Query: 139 ITTCDVISARALADLDTLLEYSF 161
D + RA+A LL ++
Sbjct: 132 KGPWDAVVTRAVAPASQLLTWTR 154
>gi|227502236|ref|ZP_03932285.1| glucose-inhibited division protein [Corynebacterium accolens ATCC
49725]
gi|227077060|gb|EEI15023.1| glucose-inhibited division protein [Corynebacterium accolens ATCC
49725]
Length = 202
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + V W RH+ + + Q+ P + ID+GSG G PGI
Sbjct: 18 QEYHDSLATDGSTRGFIGPREVPRLWERHILNCAVIEQVIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVIS 146
+I + + LIE K+ ++L V + V R +E + + DV++
Sbjct: 78 AIARPDL---HITLIEPLLKRYNYLNEVTENLGLDNVTVLRGRAEEGPIKKAVAGADVVT 134
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 135 SRAVAPLGKLAKWSLPLVRK 154
>gi|126659305|ref|ZP_01730441.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
gi|126619387|gb|EAZ90120.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
Length = 241
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-----FQLHPYPSIWI 76
++E LEK E Y L +++INL + ++FW +H+ DSL F + I
Sbjct: 19 TQEQLEKWEILYQEILLINRQINLTRITEPQEFWEKHLWDSLAGVIGLDFLNYKDSLKVI 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEA 135
D+G+G GFPG+ SI + L++ + K K + ++ + ++ V A I
Sbjct: 79 DIGTGAGFPGLPISIIFPHWQLTLLDSTQKKIKVINLFLEALKLSNSQTVVGRAEAIGHL 138
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
PQ D+ RA+ + EY P+L
Sbjct: 139 PQHREKYDLGLIRAVGEPSVCAEYVLPFLK 168
>gi|322690178|ref|YP_004209912.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
infantis 157F]
gi|320461514|dbj|BAJ72134.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 221
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLG 79
L KLE F+ + + L+ V+ W RH+ +S + D+G
Sbjct: 19 LPKLERFHAEIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVADVG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR-----IQ 133
SGGGFPG++ + L + LIE ++ +L V ++ R Q
Sbjct: 79 SGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVGLMQLQNVEIIRGRSDAVIQQ 135
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I V++ RA+A + L ++ P L
Sbjct: 136 VRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|269797063|ref|YP_003316518.1| glucose-inhibited division protein B [Sanguibacter keddieii DSM
10542]
gi|269099248|gb|ACZ23684.1| glucose-inhibited division protein B [Sanguibacter keddieii DSM
10542]
Length = 210
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 8/162 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + L + + E +E F + L+ + W RH+ +S V
Sbjct: 1 MDENYERSTLSDYFG---EAFPAVERFAHELTVQGELRGLIGPRELGRIWDRHILNSAAV 57
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
Q P +D+GSG G PG++ + E V L+E ++ +L +
Sbjct: 58 VQYLPEQGTVVDIGSGAGLPGLVIAAMRPQAE---VILVEPMERRCVWLAEMTDAMGLTN 114
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V R +E DV+++RA+A LD L +S P L
Sbjct: 115 VEVKRGRAEEFHDAFE-ADVVTSRAVAALDKLARWSLPLLRP 155
>gi|315122030|ref|YP_004062519.1| 16S rRNA methyltransferase GidB [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495432|gb|ADR52031.1| 16S rRNA methyltransferase GidB [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 176
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 92/122 (75%), Positives = 108/122 (88%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+VS STVEDFW RH+EDSLRVFQLHPY S+W+DLGSGGGFPGI+TSIQL+ I+GG VNLI
Sbjct: 1 MVSPSTVEDFWKRHIEDSLRVFQLHPYSSVWVDLGSGGGFPGIVTSIQLAEIKGGWVNLI 60
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
ES NKKA FLRYV+++T ARGKVF+CRIQEA ++I CD+ISARALA+LD LLEYSFPW
Sbjct: 61 ESNNKKAGFLRYVLKQTEARGKVFSCRIQEASKLIEKCDIISARALANLDILLEYSFPWF 120
Query: 165 YQ 166
+
Sbjct: 121 SK 122
>gi|260221688|emb|CBA30503.1| Ribosomal RNA small subunit methyltransferase G [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 224
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 18/163 (11%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--------- 68
N+ L + L KW+K NL + ++ H+ DSL V
Sbjct: 17 GLNLDAAQQAALLEYLALIQKWTKVYNLTAVRNPDEMLTHHLLDSLAVIAPLQKQLAALK 76
Query: 69 ----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+GSG G PGI+ +I V+ +++ KKA+F++ V
Sbjct: 77 EQGVFGDKPRLLDVGSGAGLPGIVIAICCP---HITVHCVDTVAKKAAFIQQVAVTLKLP 133
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV+S+RA A L +S L ++
Sbjct: 134 N--LRGIHARVESLTEPYDVVSSRAFASLVDFTTWSEKALAEQ 174
>gi|328676167|gb|AEB27037.1| Ribosomal RNA small subunit methyltransferase G [Francisella cf.
novicida Fx1]
Length = 202
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +++ + L KW+K N+ + +++ ++H+ DSL V + +D+G+G
Sbjct: 17 TEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIK-GDSTVDVGTG 75
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GG PG++ +I + L++S KK FL+ V + + +
Sbjct: 76 GGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNN--INPLNTRIENLEGN 130
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D I +RA + +DT E +L +
Sbjct: 131 FDNIISRAFSSVDTFYELCKHFLTE 155
>gi|94967073|ref|YP_589121.1| methyltransferase GidB [Candidatus Koribacter versatilis Ellin345]
gi|189039371|sp|Q1IVQ3|RSMG_ACIBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94549123|gb|ABF39047.1| 16S rRNA m(7)G-527 methyltransferase [Candidatus Koribacter
versatilis Ellin345]
Length = 219
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SL 63
I R LL+ V+ LE++ + L LKW+ ++NL + E +RH + +
Sbjct: 14 EIARIAELLDPIVVAERQLEQISVYLDLLLKWNARMNLTAVRDPEQIVLRHFGESLFAAR 73
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+F +D+GSG GFPG+ +I+ + V LIE+ KKA+FL+ VV+ T
Sbjct: 74 ELFPDPDATGSLVDVGSGAGFPGVPIAIERPGL---SVTLIEAHGKKATFLKEVVRSTRL 130
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + + DV++ RA+ + ++L S +
Sbjct: 131 TNASVQA--IRAEEYVGVADVVTMRAVEEFASILPVSARLVRP 171
>gi|228473568|ref|ZP_04058320.1| 16S rRNA methyltransferase GidB [Capnocytophaga gingivalis ATCC
33624]
gi|228274940|gb|EEK13750.1| 16S rRNA methyltransferase GidB [Capnocytophaga gingivalis ATCC
33624]
Length = 203
Score = 87.8 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 8/157 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
LL + ++ + + L+ +W+ +IN++S +E F I H+ +
Sbjct: 2 ELLLKYFPELTPTQVAQYTQAVSLYKEWNARINVISRKDMEHFVIHHLLHSLGIAKIHPL 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+GGGFPGI +I +L++S KK + V + +
Sbjct: 62 SAGQKVLDVGTGGGFPGIPLAILYPE---VSFHLVDSIGKKIKVVEEVASALSLSNVTYQ 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + D I +RA+ + + + L
Sbjct: 119 QARVET--LAGQYDYIVSRAVTQMADFYKLTKHLLKP 153
>gi|288802193|ref|ZP_06407633.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica D18]
gi|288335160|gb|EFC73595.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica D18]
Length = 207
Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 11/156 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
I++ + ++ + E+ L+ W+ KIN++S +++ + H+ SL +
Sbjct: 1 MIEIIKKYFPQ----LTPKQEEQFAALDALYHDWNAKINVISRKDIDNLYEHHILHSLAI 56
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D G+GGGFPG+ +I LI+ KK + +
Sbjct: 57 AKYINFREGTNVLDFGTGGGFPGVPLAIFFPEAN---FKLIDGTGKKIRVAQEIADAIGL 113
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + E + D I +RA+ L L++
Sbjct: 114 ENVLPSHLRGEEEK--GKFDFIVSRAVMPLPDLMKI 147
>gi|172038831|ref|YP_001805332.1| glucose inhibited division protein B [Cyanothece sp. ATCC 51142]
gi|171700285|gb|ACB53266.1| glucose inhibited division protein B [Cyanothece sp. ATCC 51142]
Length = 241
Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-----FQLHPYPSIWI 76
++E LEK E Y L +++INL + EDFW +H+ DSL F + I
Sbjct: 19 TQEQLEKWEILYQELLLVNRQINLTRITEPEDFWEKHLWDSLAGVIGLDFINYENSLKVI 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVF--ACRI 132
D+G+G GFPG+ I S + + L++S KK + ++ V A I
Sbjct: 79 DIGTGAGFPGLPIGIIFSHWK---LTLLDSTQKKIKVINLFLEALKLNNSQTVIGRAEDI 135
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
PQ T D+ RA+A+ EY P+L
Sbjct: 136 GHLPQHRETYDLGLLRAVAEPSVCAEYVLPFLK 168
>gi|282880735|ref|ZP_06289436.1| 16S rRNA methyltransferase GidB [Prevotella timonensis CRIS 5C-B1]
gi|281305397|gb|EFA97456.1| 16S rRNA methyltransferase GidB [Prevotella timonensis CRIS 5C-B1]
Length = 206
Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 14 YLLNTYN-VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ ++ ++ ++L L+ W+ KIN++S ++ + HV SL + + +
Sbjct: 3 IISKYFSSLTETQTKQLSMLQDLYNDWNAKINVISRKDIQQLYEHHVLHSLAIAKFISFK 62
Query: 73 --SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+ +D G+GGGFPGI +I LI+ KK + V +
Sbjct: 63 SGTNILDFGTGGGFPGIPLAILFPE---CRFTLIDGTGKKVRVAQEVATTIGLKNVETKH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E D + +RA+ L L++ + +++
Sbjct: 120 IRGEEEK---GKYDFVVSRAVMPLPELIKIVRKNIAKQQ 155
>gi|291517737|emb|CBK71353.1| 16S rRNA m(7)G-527 methyltransferase [Bifidobacterium longum subsp.
longum F8]
Length = 227
Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 15/153 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------DLG 79
L KLE F+ + + L+ V+ W RH+ +S + + I D+G
Sbjct: 25 LPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNMTNGIRFKTVADVG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR-----IQ 133
SGGGFPG++ + L + LIE ++ +L V ++ R Q
Sbjct: 85 SGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVIQQ 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I V++ RA+A + L ++ P L
Sbjct: 142 VRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 174
>gi|329577027|gb|EGG58502.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1467]
Length = 200
Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 43 INLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + + ++ +++H DS+ F+ D+G+G GFP I I S+
Sbjct: 1 MNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN--- 57
Query: 101 VNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ---EAPQMITTCDVISARALADLDTL 156
V +++S NK+ +FL +V + ++ R + + + D ++ARA+A L+ L
Sbjct: 58 VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETLAKQAEFRGAFDYVTARAVARLNVL 117
Query: 157 LEYSFPWLYQK 167
E P + ++
Sbjct: 118 SELCLPLVKKE 128
>gi|229816991|ref|ZP_04447273.1| hypothetical protein BIFANG_02246 [Bifidobacterium angulatum DSM
20098]
gi|229785736|gb|EEP21850.1| hypothetical protein BIFANG_02246 [Bifidobacterium angulatum DSM
20098]
Length = 222
Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 16/155 (10%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------PYPSIWIDLG 79
L LE F+ + + L+ V+ W RH+ +S + D+G
Sbjct: 19 LPMLEVFHAKLEREGEPRGLIGPRDVDIIWERHILNSAAIVPFIREATDGMRFKTVADVG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA--- 135
SGGGFPGI+ + L LIE ++ +L V + + R +E
Sbjct: 79 SGGGFPGIVAAACLPD---HEFTLIEPMERRVEWLEECVNEMGLENVTIIRARSEEVITS 135
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ V++ RA+A + L ++ P L +
Sbjct: 136 LRKDRSKHPYAVVTCRAVAPMTKLSGWTLPLLKPQ 170
>gi|282860258|ref|ZP_06269329.1| 16S rRNA methyltransferase GidB [Prevotella bivia JCVIHMP010]
gi|282586991|gb|EFB92225.1| 16S rRNA methyltransferase GidB [Prevotella bivia JCVIHMP010]
Length = 208
Score = 87.4 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
Query: 10 LRANYLLNTYN-VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--F 66
++A+ + + +S + ++ Y L+ W+ KIN++S +++ + HV SL +
Sbjct: 1 MQADIISKYFKSLSEKQTKQFGMLYELYQDWNAKINVISRKDIDNLYEHHVLHSLAIAKM 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D G+GGGFPGI +I +++ K K AS + +
Sbjct: 61 LHFKEGTNILDFGTGGGFPGIPLAIMFPEANFKMIDGTGKKIKVASEIGNSIGLDNILPM 120
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ D I +RA+ L L++
Sbjct: 121 HLRG-----EEEKGKFDFIVSRAVMPLPDLMKI 148
>gi|307699839|ref|ZP_07636890.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris FB024-16]
gi|307614877|gb|EFN94095.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris FB024-16]
Length = 224
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 3/143 (2%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
+ YF L + LV W RH+ + + P + D+GSG G
Sbjct: 30 QRNAMRYFVELLCHEGLERGLVGPKEPARIWSRHILNCAVLSDFLPECTSVADVGSGAGL 89
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG++ +I ++ V LIES +K+ +L +V + E
Sbjct: 90 PGLVLAIARPDLD---VTLIESMDKRCQWLEWVSAELDLDNVRVLRARAEDLHGKEHFPF 146
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
++ARA+ +L TLL + P + K
Sbjct: 147 VTARAVGNLSTLLGWVAPLVRPK 169
>gi|306817496|ref|ZP_07451240.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris ATCC 35239]
gi|304649720|gb|EFM47001.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris ATCC 35239]
Length = 224
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 3/143 (2%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
+ YF L + LV W RH+ + + P + D+GSG G
Sbjct: 30 QRNAMRYFVELLCHEGLERGLVGPKEPARIWSRHILNCAVLSDFLPECTSVADVGSGAGL 89
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG++ +I ++ V LIES +K+ +L +V + E
Sbjct: 90 PGLVLAIARPDLD---VTLIESMDKRCQWLEWVSAELDLDNVRVLRARAEDLHGKEHFPF 146
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
++ARA+ +L TLL + P + K
Sbjct: 147 VTARAVGNLSTLLGWVAPLVRPK 169
>gi|145297090|ref|YP_001139911.1| 16S rRNA methyltransferase GidB [Corynebacterium glutamicum R]
gi|189039499|sp|A4QIE3|RSMG_CORGB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|140847010|dbj|BAF56009.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 223
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LEK ++ + V W RH+ + + + D+GSG G
Sbjct: 27 DNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMIT 140
PGI +I + + LIE K++ +L V + V R +E + +
Sbjct: 87 LPGIPLAIARPDLN---ITLIEPLLKRSVYLNEVKEALNLDNVTVIRGRAEEKVVRKQVG 143
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D++++RA+A L L +S P +
Sbjct: 144 LVDIVTSRAVAPLGKLATWSLPLVK 168
>gi|325104561|ref|YP_004274215.1| 16S rRNA m(7)G-527 methyltransferase [Pedobacter saltans DSM 12145]
gi|324973409|gb|ADY52393.1| 16S rRNA m(7)G-527 methyltransferase [Pedobacter saltans DSM 12145]
Length = 210
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--F 66
+ + + + ++ + E+++ + L+ W+ +IN++S ++ + RH+ SL +
Sbjct: 1 MSSEIIYKYFPKLNSKQKEQIDKLFDLYFLWNSQINVISRKDIDLLYERHILHSLAIAKV 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+G+GGGFPGI +I + LV+ I K K S + + +
Sbjct: 61 CEFKPGQSVLDVGTGGGFPGIPLAILFPETKFHLVDSIGKKIKVVSEVAKGIGLKNLKAT 120
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q+ D + +RA+ L +PW+ K
Sbjct: 121 -----HSRAEQIDEKFDFVVSRAVTQLKDF----YPWIRDK 152
>gi|187930941|ref|YP_001890925.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187711850|gb|ACD30147.1| methyltransferase GidB [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 202
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +++ + L KW+K N+ + +++ ++H+ DSL V + +D+G+G
Sbjct: 17 TEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIK-GDSTVDVGTG 75
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GG PG++ +I + L++S KK FL+ V + + +
Sbjct: 76 GGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKNLSLNN--INPLNTRIENLEGN 130
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D I +RA + +DT E +L +
Sbjct: 131 FDNIISRAFSSVDTFYELCKHFLTE 155
>gi|154706726|ref|YP_001423622.1| 16S rRNA methyltransferase GidB [Coxiella burnetii Dugway
5J108-111]
gi|189039500|sp|A9KBS7|RSMG_COXBN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154356012|gb|ABS77474.1| methyltransferase [Coxiella burnetii Dugway 5J108-111]
Length = 204
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
L+ V ET+++ + F KW++ NL + + ++ H+ DSL
Sbjct: 1 MTEKLKQGIDQLGLKV-PETIQQSMFAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLS 59
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 60 I-LPYLKGDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKIT 115
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q D I+ RAL + ++E + L
Sbjct: 116 NVTIIQERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLRP 157
>gi|325954874|ref|YP_004238534.1| ribosomal RNA small subunit methyltransferase G [Weeksella virosa
DSM 16922]
gi|323437492|gb|ADX67956.1| Ribosomal RNA small subunit methyltransferase G [Weeksella virosa
DSM 16922]
Length = 209
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ ++ + +++++ +E+L L+ +W+++IN+VS ++ ++ H+ SL + ++ +
Sbjct: 3 DIIIRYFPSLTKKQIEQLSRLGDLYKEWNEQINVVSRKDIDKLYVNHILHSLAIAKVMEF 62
Query: 72 PS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+GGG PGI +I +L++S KK + +
Sbjct: 63 TDGSKVLDVGTGGGLPGIPLAILFP---NVHFHLVDSIGKKIKVVHAIATSLGLEN--VK 117
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
+ A + D + +RA+ + +E+
Sbjct: 118 AEQKRAESLTDQYDFVVSRAVTAMPKFVEW 147
>gi|296445003|ref|ZP_06886964.1| methyltransferase GidB [Methylosinus trichosporium OB3b]
gi|296257424|gb|EFH04490.1| methyltransferase GidB [Methylosinus trichosporium OB3b]
Length = 221
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH------VEDSLRVFQLHPYPSIWI 76
R + + E + L KW K NLV++ T+ W RH + D+ W
Sbjct: 22 RSHIREFETYEALLRKWQKSTNLVAAGTLPHLWTRHFADSAQILDAFPNIDAVSKIETWA 81
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA- 135
DLG+G GFPG++ +I L G V+LIES +K SFLR V ++T A ++ RI+
Sbjct: 82 DLGAGAGFPGMVLAICLKDRPGARVHLIESDQRKVSFLRAVSRETGAAAEIHLGRIESIL 141
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + ++ARALA L L+++S L +
Sbjct: 142 PSLEDRVVGVTARALAPLSQLVDWSRELLLK 172
>gi|193215519|ref|YP_001996718.1| 16S rRNA methyltransferase GidB [Chloroherpeton thalassium ATCC
35110]
gi|193088996|gb|ACF14271.1| methyltransferase GidB [Chloroherpeton thalassium ATCC 35110]
Length = 217
Score = 87.4 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
+S LE+L + + L+W++ +NLVS ++H+ SL + H + + +D+
Sbjct: 20 LSNAQLERLWNYAEMILEWNQNVNLVSRKDAHTVMLKHILHSLTMGFFHAFKTDESVLDI 79
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
G+GGG PGI +I LI+S KK + R + + + R ++ +
Sbjct: 80 GTGGGLPGIPLAIAYPETR---FLLIDSVGKKINATRDMAMRLGLKNVRTLKARAEDLKK 136
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ +R + L L +++ P L
Sbjct: 137 --EKFHTVVSRQVTTLKKLCDWARPLL 161
>gi|126663166|ref|ZP_01734164.1| glucose-inhibited division protein/predicted methyltransferase
[Flavobacteria bacterium BAL38]
gi|126624824|gb|EAZ95514.1| glucose-inhibited division protein/predicted methyltransferase
[Flavobacteria bacterium BAL38]
Length = 209
Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 14/166 (8%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SL 63
+ ILR N+S + + + L+ W+ KIN++S +++ + RHV +
Sbjct: 1 MDEILRQ-----FPNLSDNQILQFQKLQSLYEDWNAKINVISRKDIDELYTRHVLHSLGI 55
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
S +D+G+GGGFPGI +I ++ L+++I K + V
Sbjct: 56 AKIIEFRPGSKIMDVGTGGGFPGIPLAILHPEVDFYLIDVIAK---KIRVVNEVAAGLGL 112
Query: 124 -RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
K R + Q D I +RA+ ++ + + + +K+
Sbjct: 113 KNVKAEQKRAELVKQE---FDFIVSRAVTNMPDFVSWVDGKISKKQ 155
>gi|320459522|dbj|BAJ70143.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 221
Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLG 79
L KLE F+ + + L+ V+ W RH+ +S + D+G
Sbjct: 19 LPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVADVG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR-----IQ 133
SGGGFPG++ + L + LIE ++ +L V ++ R Q
Sbjct: 79 SGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVIQQ 135
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I V++ RA+A + L ++ P L
Sbjct: 136 VRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|296455141|ref|YP_003662285.1| methyltransferase GidB [Bifidobacterium longum subsp. longum
JDM301]
gi|296184573|gb|ADH01455.1| methyltransferase GidB [Bifidobacterium longum subsp. longum
JDM301]
Length = 221
Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLG 79
L KLE F+ + + L+ V+ W RH+ +S + D+G
Sbjct: 19 LPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVADVG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR-----IQ 133
SGGGFPG++ + L + LIE ++ +L V ++ R Q
Sbjct: 79 SGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVIQQ 135
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I V++ RA+A + L ++ P L
Sbjct: 136 VRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|227547518|ref|ZP_03977567.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227212033|gb|EEI79929.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 227
Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLG 79
L KLE F+ + + L+ V+ W RH+ +S + D+G
Sbjct: 25 LPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNVTNGIRFKTVADVG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR-----IQ 133
SGGGFPG++ + L + LIE ++ +L V ++ R Q
Sbjct: 85 SGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVIQQ 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I V++ RA+A + L ++ P L
Sbjct: 142 VRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 174
>gi|213693340|ref|YP_002323926.1| methyltransferase GidB [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213524801|gb|ACJ53548.1| methyltransferase GidB [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 227
Score = 87.4 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLG 79
L KLE F+ + + L+ V+ W RH+ +S + D+G
Sbjct: 25 LPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVADVG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR-----IQ 133
SGGGFPG++ + L + LIE ++ +L V ++ R Q
Sbjct: 85 SGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVIQQ 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I V++ RA+A + L ++ P L
Sbjct: 142 VRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 174
>gi|317503188|ref|ZP_07961249.1| glucose inhibited division protein B [Prevotella salivae DSM 15606]
gi|315665691|gb|EFV05297.1| glucose inhibited division protein B [Prevotella salivae DSM 15606]
Length = 209
Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LH 69
+ + + +++ ++ E L+ W+ KIN++S +++ + HV SL + +
Sbjct: 3 DIITKYFPDLTDLQCQQYEMLDALYRDWNSKINVISRKDIDNLYEHHVLHSLAIAKVLRF 62
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D G+GGGFPGI +I L++ I K + A+ + + T +
Sbjct: 63 KPSTEILDFGTGGGFPGIPLAIMFPQCRFHLIDGIGKKIRVATEISKAIGLT--NVEALQ 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E D + +RA+ L L++ + +++
Sbjct: 121 RRGEE---ETRKFDFVVSRAVMPLPDLMKLIRKNIRKEQ 156
>gi|312876171|ref|ZP_07736158.1| methyltransferase GidB [Caldicellulosiruptor lactoaceticus 6A]
gi|311796986|gb|EFR13328.1| methyltransferase GidB [Caldicellulosiruptor lactoaceticus 6A]
Length = 239
Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 10/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ +L + NT V + + L L+ +K NL + E+F I+H+ DSL
Sbjct: 4 LLDRVLEYYKVKNTLVV----KQLFLKYMNLVLEKNKLFNLTAIEDEEEFVIKHIADSLS 59
Query: 65 VFQL-----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ + + ID+GSG G PG+ I + SI L + + K + +
Sbjct: 60 LLKFLEEESSSQNPVAIDIGSGFGAPGLFVKIAMPSINVWLNDSNKKKCNFMIEAKESLG 119
Query: 120 KTAARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ A + D + ARA+ L+ L EY+ P L
Sbjct: 120 ISGVNVVCERAEVLGRKEDFREKFDFVFARAVDRLNVLCEYALPLLK 166
>gi|229593491|ref|YP_002875610.1| 16S rRNA methyltransferase GidB [Pseudomonas fluorescens SBW25]
gi|229365357|emb|CAY53741.1| glucose inhibited division protein B methyltransferase [Pseudomonas
fluorescens SBW25]
Length = 214
Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+++ E L + L +KW+K NL + ++ RH+ DSL V W+D+G
Sbjct: 23 DLTPAQHELLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMPFIENG-RWLDVG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGG PGI +I + V ++S KK FL V + E
Sbjct: 82 SGGGMPGIPLAILFPESQ---VTCLDSNGKKTRFLTQVKLELKLDNLQVIHSRVEGFTPE 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ I +RA + ++ ++
Sbjct: 139 QPFNGIVSRAFSSMENFSNWTRHL 162
>gi|295697830|ref|YP_003591068.1| methyltransferase GidB [Bacillus tusciae DSM 2912]
gi|295413432|gb|ADG07924.1| methyltransferase GidB [Bacillus tusciae DSM 2912]
Length = 245
Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSGGGFPG 86
LE + ++ ++++NL + + E + +H D + P +D+GSG GFPG
Sbjct: 32 LEVYERRLVERNREVNLTAVTDAEGVYWKHFYDSLVVLGLPEVPQAGFLVDVGSGAGFPG 91
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA---PQMITTC 142
++ ++ V+L+++ K+ FL V + R +V R +E P +
Sbjct: 92 LVLAVARPG---FSVSLLDALRKRVWFLEEVRGELGLTRVRVVHGRAEEYGRRPGWRESF 148
Query: 143 DVISARALADLDTLLEYSFPWLY 165
D+ +ARA+A + L E P++
Sbjct: 149 DMATARAVAQMSVLAELLLPFVR 171
>gi|260885222|ref|ZP_05896795.1| 16S rRNA methyltransferase GidB [Prevotella tannerae ATCC 51259]
gi|260853054|gb|EEX72923.1| 16S rRNA methyltransferase GidB [Prevotella tannerae ATCC 51259]
Length = 210
Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 6 SNSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
N++ + + + +++ E + E L+ W+ KIN++S +++ + HV
Sbjct: 1 MNAV---DIIFKYFPSLTPEQRVQFEQLDALYHDWNSKINVISRKDIDNLYEHHVLHSLG 57
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +DLG+GGGFPGI +I + L++S KK V++
Sbjct: 58 IAKALRFRPETEVMDLGTGGGFPGIPLAILFPEVR---FTLLDSIGKKIKVASAVIEALN 114
Query: 123 A-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
K F + E Q D I +RA+ L + + +
Sbjct: 115 LQNVKAFHRNVIEEKQ---KFDFIVSRAVMPLPDM----EKLVRK 152
>gi|91785987|ref|YP_546939.1| 16S rRNA methyltransferase GidB [Polaromonas sp. JS666]
gi|123165596|sp|Q12HF1|RSMG_POLSJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91695212|gb|ABE42041.1| 16S rRNA m(7)G-527 methyltransferase [Polaromonas sp. JS666]
Length = 226
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 14/160 (8%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
LRA ++ + +L + L KW+K NL + + H+ DSL
Sbjct: 8 LRAGLKALQLELTDSQVGQLLDYQDLIGKWTKVYNLTAVRDPVEMMTHHLLDSLAAVPPL 67
Query: 69 --------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ +D+GSG G PG++ +I V +++ KKA+F++
Sbjct: 68 RRHLRKTGQEQGACLLDVGSGAGLPGVVIAICCPE---VAVTCVDTVAKKAAFIKQAALA 124
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + T DVI +RA A L ++S
Sbjct: 125 LKLPN--LSGLHARVETITTLFDVICSRAFASLADFTQWS 162
>gi|29655210|ref|NP_820902.1| 16S rRNA methyltransferase GidB [Coxiella burnetii RSA 493]
gi|161829865|ref|YP_001597740.1| 16S rRNA methyltransferase GidB [Coxiella burnetii RSA 331]
gi|3122151|sp|P94614|RSMG_COXBU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|189039501|sp|A9NBA9|RSMG_COXBR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1780761|emb|CAA71460.1| unnamed protein product [Coxiella burnetii]
gi|29542482|gb|AAO91416.1| methyltransferase [Coxiella burnetii RSA 493]
gi|161761732|gb|ABX77374.1| methyltransferase GidB [Coxiella burnetii RSA 331]
Length = 204
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 6/161 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
L+ V ET+++ + F KW++ NL + + ++ H+ DSL
Sbjct: 1 MTEKLKQGIDQLGLKV-AETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLS 59
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 60 I-LPYLKGDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKIT 115
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D I+ RAL + ++E + L
Sbjct: 116 NVTIIQERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLR 156
>gi|212211702|ref|YP_002302638.1| 16S rRNA methyltransferase GidB [Coxiella burnetii CbuG_Q212]
gi|226796822|sp|B6J2B9|RSMG_COXB2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|212010112|gb|ACJ17493.1| methyltransferase [Coxiella burnetii CbuG_Q212]
Length = 204
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 6/161 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
L+ V ET+++ + F KW++ NL + + ++ H+ DSL
Sbjct: 1 MTEKLKQGIDQLGLKV-AETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLS 59
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 60 I-LPYLKGDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKIT 115
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D I+ RAL + ++E + L
Sbjct: 116 NVTIIQERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLR 156
>gi|256381070|ref|YP_003104730.1| methyltransferase GidB [Actinosynnema mirum DSM 43827]
gi|255925373|gb|ACU40884.1| methyltransferase GidB [Actinosynnema mirum DSM 43827]
Length = 223
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
F + + + L+ V+ W RHV +S V +L P S +D+GSG G PGI +
Sbjct: 22 EFTAMLTEHGVERGLIGPREVDRLWERHVLNSAVVAELLPQGSKVVDVGSGAGLPGIPLA 81
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I +E + L+E ++ ++L VV + +V R +E + + DV++AR
Sbjct: 82 IARPDLE---LVLLEPMARRVAWLTEVVDALGLQVEVVRGRAEEGPVRKRLADRDVVTAR 138
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L+ L + P L
Sbjct: 139 AVAPLERLAGWCLPLLRP 156
>gi|305681660|ref|ZP_07404466.1| 16S rRNA methyltransferase GidB [Corynebacterium matruchotii ATCC
14266]
gi|305658820|gb|EFM48321.1| 16S rRNA methyltransferase GidB [Corynebacterium matruchotii ATCC
14266]
Length = 205
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L + E ++ L + W RH+ + + + D+GSG G
Sbjct: 10 DNLARAERYHDLLATTGAIRGFIGPRETPKLWDRHILNCAVLGEAIATGLTVADIGSGAG 69
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMIT 140
PGI +I + + L+E K+++FL VV++ V R +E +
Sbjct: 70 LPGIPLAIARPDL---TIYLVEPLLKRSTFLTEVVRELGLENVTVIRGRAEEREVKVTLG 126
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L L +S P +
Sbjct: 127 LVDVVTSRAVAPLGKLAGWSLPLVKP 152
>gi|121281964|gb|ABM53568.1| conserved hypothetical protein [uncultured bacterium CBNPD1 BAC
clone 905]
Length = 209
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SL 63
+ IL+ Y N ++ +E KL+ L+ W++KIN++S ++ + +HV +
Sbjct: 1 MDEILK--YFPNLTDLQKEQFAKLDI---LYHDWNEKINVISRKDIDALYTKHVLHSLGI 55
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D+G+GGGFPGI +I L+++I K K + ++
Sbjct: 56 AKINKFEPGTFVLDVGTGGGFPGIPLAILFPETRFYLIDVIAKKIKVVKAVAEALELKNV 115
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ + A + D I +RA+ ++ + + + +++
Sbjct: 116 KAEQI-----RAENVKGDFDFIVSRAVTNMPDFVSWVKTKIKKQQ 155
>gi|320451554|ref|YP_004203650.1| 16S rRNA methyltransferase GidB [Thermus scotoductus SA-01]
gi|320151723|gb|ADW23101.1| 16S rRNA methyltransferase GidB [Thermus scotoductus SA-01]
Length = 246
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIW 75
++ L Y L ++ +++ NL + T E+ ++H DSL L P
Sbjct: 23 GLDL-EAHLSTFSRLYDLLMEANRRTNLTALRTEEEVVVKHFLDSLTLLTLPLFQGPWRV 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACR 131
+DLG+G GFPG+ I +E V L+++ KK +F+ V+ +G A
Sbjct: 82 LDLGTGAGFPGLPLKIVRPELE---VTLLDATKKKVAFVAQAVEALGLKGAYPLWGRAEE 138
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ P+ + ARA+A L L+E P++
Sbjct: 139 LAHMPEHREAYHRVVARAVASLCVLVELGLPFVA 172
>gi|225020857|ref|ZP_03710049.1| hypothetical protein CORMATOL_00865 [Corynebacterium matruchotii
ATCC 33806]
gi|224946339|gb|EEG27548.1| hypothetical protein CORMATOL_00865 [Corynebacterium matruchotii
ATCC 33806]
Length = 205
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 6/146 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L + E ++ L + W RH+ + + + D+GSG G
Sbjct: 10 DNLARAERYHDLLATTGAIRGFIGPRETPKLWDRHILNCAVLGEAIAAGLTVADIGSGAG 69
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMIT 140
PGI +I + + L+E K+++FL VV + V R +E +
Sbjct: 70 LPGIPLAIARPDL---TIYLVEPLLKRSTFLTEVVHELGLENVTVIRGRAEEREVKAALG 126
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L L +S P +
Sbjct: 127 LVDVVTSRAVAPLGKLAGWSLPLVKP 152
>gi|62391943|ref|YP_227345.1| 16S rRNA methyltransferase GidB [Corynebacterium glutamicum ATCC
13032]
gi|41223090|emb|CAF19035.1| GLUCOSE-INHIBITED DIVISION PROTEIN,
GIDB(S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE)
[Corynebacterium glutamicum ATCC 13032]
Length = 209
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LEK ++ + V W RH+ + + + D+GSG G
Sbjct: 13 DNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGAG 72
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMIT 140
PGI +I + + LIE K++ +L V + V R +E + +
Sbjct: 73 LPGIPLAIARPDLN---ITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAEEKVVRKQVG 129
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D++++RA+A L L +S P +
Sbjct: 130 LVDIVTSRAVAPLGKLATWSLPLVK 154
>gi|23309017|ref|NP_602288.2| 16S rRNA methyltransferase GidB [Corynebacterium glutamicum ATCC
13032]
gi|23821575|sp|Q8NL53|RSMG_CORGL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21325869|dbj|BAC00490.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Corynebacterium glutamicum
ATCC 13032]
Length = 223
Score = 87.0 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LEK ++ + V W RH+ + + + D+GSG G
Sbjct: 27 DNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMIT 140
PGI +I + + LIE K++ +L V + V R +E + +
Sbjct: 87 LPGIPLAIARPDLN---ITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAEEKVVRKQVG 143
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D++++RA+A L L +S P +
Sbjct: 144 LVDIVTSRAVAPLGKLATWSLPLVK 168
>gi|54027642|ref|YP_121884.1| 16S rRNA methyltransferase GidB [Nocardia farcinica IFM 10152]
gi|81602318|sp|Q5YMS1|RSMG_NOCFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54019150|dbj|BAD60520.1| putative ribosomal RNA small subunit methyltransferase [Nocardia
farcinica IFM 10152]
Length = 260
Score = 86.7 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+Y + L+ V W RH+ + V +L P + +D+GSG G PGI +
Sbjct: 34 RYYDALATAGVERGLIGPREVPRLWDRHILNCAVVAELMPESATVVDVGSGAGLPGIPLA 93
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I + + L+E ++ +FL + V R + + DV+++R
Sbjct: 94 IARPDLR---ITLVEPLLRRTAFLSEFIDAAGLDITVVRGRAEHSGVIKEAGGADVVTSR 150
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L L ++S P L
Sbjct: 151 AVAPLAKLAQWSLPLLRD 168
>gi|326564042|gb|EGE14286.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 12P80B1]
gi|326570508|gb|EGE20548.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis BC8]
Length = 225
Score = 86.7 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
++ ++ + L W K NL + + ++ ++H+ D + + + P+ +
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
D+G+G G P +I +I ++ ++S KK F+R + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDW---HIDALDSNQKKIRFIRQISSEIGLKNIMPIASRI 143
Query: 133 QEAP-QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGAYDVITSRAFASLTDFVSLATPCLAD 178
>gi|225848373|ref|YP_002728536.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643342|gb|ACN98392.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 205
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 11/167 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L N+ +S++ +EK E + ++ LKW+K NL S E+ ++H DSL +
Sbjct: 1 MMDLLEKLAKENSIELSKDKIEKFEIYLYMLLKWNKAYNLTSIRKKEEIIVKHFLDSLTL 60
Query: 66 FQLHPYP------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+L D G+G GFPG+ I + LIES KK FL + +
Sbjct: 61 VKLFEAKGIDLSGKKVADFGTGAGFPGVPLKIYYQDK--IDLYLIESITKKCIFLEMLSK 118
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + V R ++ D++ +RA +L+ L +
Sbjct: 119 ELKLKYTVLCKRAEDIQ---EKFDIVVSRATGKTFEVLKIGKNLLKE 162
>gi|297243214|ref|ZP_06927149.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis AMD]
gi|296888748|gb|EFH27485.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis AMD]
Length = 236
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------PYPSIWID 77
E LEK + F+ + L+ + W RH+ +S V D
Sbjct: 32 EALEKCKLFHVKLQQEGLVRGLIGPRDMNILWERHILNSAAVVPFIKEAVVGRKNKRVAD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGGFPG++ + L + V LIE ++ +L V +F R E
Sbjct: 92 VGSGGGFPGLVLAACLPDYD---VTLIEPMERRVDWLCECVALMKLKNVTIFHGRSDEVI 148
Query: 137 QMITT-----CDVISARALADLDTLLEYSFPWLYQ 166
I + DV++ RA+A + L ++ P L +
Sbjct: 149 DKIKSHEIPAFDVVTCRAVAPMTKLAGWTIPLLNK 183
>gi|239622849|ref|ZP_04665880.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514846|gb|EEQ54713.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 227
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLG 79
L KLE F+ + + L+ V+ W RH+ +S + D+G
Sbjct: 25 LPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVADVG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR-----IQ 133
SGGGFPG++ + L + LIE ++ +L V ++ R Q
Sbjct: 85 SGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVGLMQLQNVEIIRGRSDAVIQQ 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I V++ RA+A + L ++ P L
Sbjct: 142 VRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 174
>gi|23465229|ref|NP_695832.1| 16S rRNA methyltransferase GidB [Bifidobacterium longum NCC2705]
gi|189440303|ref|YP_001955384.1| 16S rRNA methyltransferase GidB [Bifidobacterium longum DJO10A]
gi|312133637|ref|YP_004000976.1| gidb [Bifidobacterium longum subsp. longum BBMN68]
gi|317482353|ref|ZP_07941373.1| glucose inhibited division protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322692113|ref|YP_004221683.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
longum JCM 1217]
gi|29336746|sp|Q8G6J4|RSMG_BIFLO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766881|sp|B3DP27|RSMG_BIFLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|23325858|gb|AAN24468.1| possible glucose inhibited division protein B [Bifidobacterium
longum NCC2705]
gi|189428738|gb|ACD98886.1| Putative S-adenosylmethionine-dependent methyltransferase for
bacterial cell division [Bifidobacterium longum DJO10A]
gi|311772895|gb|ADQ02383.1| GidB [Bifidobacterium longum subsp. longum BBMN68]
gi|316916233|gb|EFV37635.1| glucose inhibited division protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320456969|dbj|BAJ67591.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 221
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLG 79
L KLE F+ + + L+ V+ W RH+ +S + D+G
Sbjct: 19 LPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVADVG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR-----IQ 133
SGGGFPG++ + L + LIE ++ +L V ++ R Q
Sbjct: 79 SGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVGLMQLQNVEIIRGRSDAVIQQ 135
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I V++ RA+A + L ++ P L
Sbjct: 136 VRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|300866835|ref|ZP_07111513.1| Ribosomal RNA small subunit methyltransferase G [Oscillatoria sp.
PCC 6506]
gi|300335185|emb|CBN56673.1| Ribosomal RNA small subunit methyltransferase G [Oscillatoria sp.
PCC 6506]
Length = 236
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 67/163 (41%), Gaps = 21/163 (12%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-------------- 67
+ E + + Y L + +K +NL + +FW +H+ DSLR
Sbjct: 23 NDEQQRQFQQLYELIIDGNKHLNLTRITEPLEFWEKHLWDSLRGIAPLLSPNNLGAIDEL 82
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
ID+G+G GFPG+ +I L + V L++ KK SFL +V + + V
Sbjct: 83 PLKPMQKVIDIGTGAGFPGLPIAIALPN---FTVTLLDGTRKKISFLETLVPELGIKNAV 139
Query: 128 ----FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I PQ D+ RA+A +YS P L
Sbjct: 140 PLIGRSEEIAHQPQHRQFYDLAFLRAVASASICAKYSLPLLKP 182
>gi|253582391|ref|ZP_04859614.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
varium ATCC 27725]
gi|251835930|gb|EES64468.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
varium ATCC 27725]
Length = 233
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 1/161 (0%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + E + L + L +++ NL + + +H DSL +
Sbjct: 1 MREFLLEGIKKLNIEYTDEKINNLIKYLKLLTEYNAHTNLTALRDEKSIIEKHFLDSLLL 60
Query: 66 FQLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
L ID+G+G GFPG++ +I +IE L++ I K K ++ ++
Sbjct: 61 QNLIKKEFKKAIDIGTGAGFPGMVLAIFNPNIEFTLMDSIGKKTKFLDLVKERLELHNVT 120
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ T D+ R ++ L T+LEY P+L
Sbjct: 121 VVTSRAEDYINDENRETYDLGLCRGVSKLGTILEYIIPFLK 161
>gi|312794737|ref|YP_004027660.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181877|gb|ADQ42047.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 238
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 10/162 (6%)
Query: 13 NYLLNTYNVSRETL---EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
+ +L YNV + TL + + L L+ +K NL + E+F I+H+ DSL + +
Sbjct: 5 DRVLEYYNV-KNTLVVKQLFLKYMNLVLEKNKLFNLTAIEDEEEFVIKHIADSLSLLKFL 63
Query: 69 ----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ID+GSG G PG+ I + SI L + + K + + +
Sbjct: 64 EEESSIQNPVAIDIGSGFGAPGLFVKIAMPSINVWLNDSNKKKCNFMIEAKESLGISGVN 123
Query: 125 GKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A + D + ARA+ L+ L EY+ P L
Sbjct: 124 IVCERAEVLGRKEDFREKFDFVFARAVDKLNVLCEYALPLLK 165
>gi|320095101|ref|ZP_08026810.1| methyltransferase GidB [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977968|gb|EFW09602.1| methyltransferase GidB [Actinomyces sp. oral taxon 178 str. F0338]
Length = 236
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+ F + + + L+ +E W RH+ +S V P +D+GSG G P
Sbjct: 46 FADIAEFARMLEEEGELRGLLGPRDMERIWSRHLVNSAAVLDFLPRRGQVLDIGSGAGLP 105
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
GI+ ++ ++ V+L E ++ +L VV E + DV+
Sbjct: 106 GIVIAVCRPDLD---VHLAEPMARRCEWLADVVDALGLDNTTIHQARAEELRGKGKADVV 162
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+ARA+A++ L+ + +
Sbjct: 163 TARAVANMAKLVRMTSKLIAP 183
>gi|119382762|ref|YP_913818.1| methyltransferase GidB [Paracoccus denitrificans PD1222]
gi|171704537|sp|A1AXX8|RSMG_PARDP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119372529|gb|ABL68122.1| 16S rRNA m(7)G-527 methyltransferase [Paracoccus denitrificans
PD1222]
Length = 193
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLG 79
VSRET E+L + L KW+ INL+++ST++ RH+ DSL + ++ W+DLG
Sbjct: 3 VSRET-ERLATYAGLLRKWNPAINLIAASTIDQIEARHIADSLHLVEIAKNAQGSWVDLG 61
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
SGGG PGI+ +I +E ++++ES +K +FLR +++ A KV RI+ ++
Sbjct: 62 SGGGLPGIVVAIMRPDLE---LSMVESDQRKGAFLRNAIRELALPHAKVLCKRIEALDRL 118
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
+SARALA L L+ Y L
Sbjct: 119 DAAN--LSARALAPLPQLMAYVERHLSP 144
>gi|77461957|ref|YP_351464.1| 16S rRNA methyltransferase GidB [Pseudomonas fluorescens Pf0-1]
gi|123602668|sp|Q3K431|RSMG_PSEPF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77385960|gb|ABA77473.1| 16S rRNA m(7)G-527 methyltransferase [Pseudomonas fluorescens
Pf0-1]
Length = 214
Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
+KW++ NL + ++ RH+ DSL V W+D+GSGGG PGI +I
Sbjct: 40 IKWNQAYNLTAVRDPDEMVSRHLLDSLSVMSFIENG-RWLDVGSGGGMPGIPLAILYPDS 98
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
+ V ++S KK FL V + EA Q + I +RA + ++
Sbjct: 99 Q---VTCLDSNGKKTRFLTQVKLELKLDNLQVIHSRVEAFQPAQPFNGIISRAFSSMENF 155
Query: 157 LEYSFPW 163
++
Sbjct: 156 TNWTRHL 162
>gi|320009744|gb|ADW04594.1| methyltransferase GidB [Streptomyces flavogriseus ATCC 33331]
Length = 238
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + L K L+ V W RH+ + + ++ P D+GSG G
Sbjct: 20 EFFPEAVRYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTC 142
PGI ++ ++ + L+E ++ +FL+ VV+ V R +E +
Sbjct: 80 LPGIPLALVRPDLK---ITLLEPLLRRTNFLQEVVELLGLNHVTVVRGRAEEVLGTLQPV 136
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+A LD L + P L
Sbjct: 137 HVVTARAVAPLDRLAGWGVPLLRP 160
>gi|206890813|ref|YP_002248427.1| methyltransferase GidB [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742751|gb|ACI21808.1| methyltransferase GidB [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 223
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 12 ANYLLNTYNVSR--ETLE----KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ L+N+ + + +E K ++ KW+K NL S ++ ++H DSL
Sbjct: 13 SSILINSLKLPDDDKQIEVLADKFLFYLSELKKWNKAYNLTSIEDEKEIIVKHFIDSLLY 72
Query: 66 -FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ P D+G+G GFPGI +I + + LIE KK +FL+ + +K
Sbjct: 73 LCFISENPLSIADIGTGAGFPGIPIAIVRPRAK---ITLIEPSWKKNAFLKNIKRKLELE 129
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + +E D++ +RAL + +++ L ++
Sbjct: 130 NIEIIKAKAEEIHN---KFDIVISRALWSIKDFIKHCNHLLKKE 170
>gi|260911194|ref|ZP_05917797.1| glucose-inhibited division protein B [Prevotella sp. oral taxon 472
str. F0295]
gi|260634674|gb|EEX52761.1| glucose-inhibited division protein B [Prevotella sp. oral taxon 472
str. F0295]
Length = 215
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 7 NSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N I + + + N++ E ++L L+ W++KIN+VS +++ ++ HV SL +
Sbjct: 5 NKIKTMDEIRKYFKNLTAEQQDQLIKLGELYRMWNEKINVVSRKDIDNLYLHHVLHSLAI 64
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + +D G+GGGFPGI +I + LI+ KK + +
Sbjct: 65 AKYVQFKAGTRVLDFGTGGGFPGIPLAIVFPECQ---FKLIDRTAKKIRVTQEIATAIGL 121
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + D + +RA+ L L++
Sbjct: 122 TNAQ--AEQEAGEEEQGEYDFVVSRAVMPLPELMKI 155
>gi|118586485|ref|ZP_01543929.1| glucose-inhibited division protein GidB [Oenococcus oeni ATCC
BAA-1163]
gi|118433049|gb|EAV39771.1| glucose-inhibited division protein GidB [Oenococcus oeni ATCC
BAA-1163]
Length = 242
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 10 LRANYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--- 61
+ + + T N +S + + + L++SKK+NL + +D W++H D
Sbjct: 1 MNPDEFVTTLNNQSLPISNRKMVLFQTYLEFLLEYSKKVNLTAIKEPKDIWLKHFYDSLT 60
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + ID+GSG GFPG+ I + + L++S K+ +FL ++ K
Sbjct: 61 PLLYLPDMNKKASLIDIGSGAGFPGVPLKIVN---QKFQLTLLDSLQKRIAFLDQLIDKL 117
Query: 122 AA-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D ARA+++ +TLLE P++
Sbjct: 118 NLKNVETVHGRAEDFAHNLNYREKYDFAIARAVSNTNTLLELLLPFVK 165
>gi|160872231|ref|ZP_02062363.1| methyltransferase GidB [Rickettsiella grylli]
gi|159121030|gb|EDP46368.1| methyltransferase GidB [Rickettsiella grylli]
Length = 214
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
N + VS++T ++L + L KW++ NL S +H+ DSL + P +
Sbjct: 18 NRFEVSKKTSQQLVDYVLLLHKWNQIHNLTSIRNPLQMLSKHIMDSLAISPYLRGPH-IL 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+G+G G PG+ ++ L++S KK FL Y++Q E
Sbjct: 77 DVGTGAGLPGLPLALTHP---HYHFTLLDSNGKKTRFLTYILQTLMISNVDIISLRVEKY 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
+ + I +RA + L+ L +
Sbjct: 134 DVKKCFNSIVSRAFSQLNNFLHKTQHL 160
>gi|300859523|ref|YP_003784506.1| glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis FRC41]
gi|300686977|gb|ADK29899.1| glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis FRC41]
gi|302207206|gb|ADL11548.1| Glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis C231]
gi|302331767|gb|ADL21961.1| Glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis 1002]
gi|308277459|gb|ADO27358.1| Glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis I19]
Length = 223
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+K ++ L + + W RH+ + + + + D+GSG G P
Sbjct: 30 LDKAVEYHRLLATDGSTRGFIGPREIPKLWDRHILNCAVIGEAMDSNARVADIGSGAGLP 89
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTC 142
GI ++ +E + LIE K++ FL V + R +E +
Sbjct: 90 GIPLALARPDLE---ITLIEPLLKRSVFLGEVKDSLGLDNVTIMRGRAEEKVIRNELGLV 146
Query: 143 DVISARALADLDTLLEYSFPWLY 165
DV+++RA+A L L +S P +
Sbjct: 147 DVVTSRAVAPLGKLAGWSLPLVR 169
>gi|182437487|ref|YP_001825206.1| 16S rRNA methyltransferase GidB [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326778142|ref|ZP_08237407.1| Ribosomal RNA small subunit methyltransferase G [Streptomyces cf.
griseus XylebKG-1]
gi|178466003|dbj|BAG20523.1| putative glucose-inhibited division protein B [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326658475|gb|EGE43321.1| Ribosomal RNA small subunit methyltransferase G [Streptomyces cf.
griseus XylebKG-1]
Length = 246
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 35 RYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 94
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 95 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGKLQPVHVVTARA 151
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 152 VAPLDRLAGWGVPLLKP 168
>gi|299142647|ref|ZP_07035777.1| 16S rRNA methyltransferase GidB [Prevotella oris C735]
gi|298575862|gb|EFI47738.1| 16S rRNA methyltransferase GidB [Prevotella oris C735]
Length = 209
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 67/165 (40%), Gaps = 11/165 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
I+ + +++ + L+ W+ KIN++S + + + HV SL +
Sbjct: 1 MTDIITKYFP----HLTEVQSRQFAMLDALYRDWNSKINVISRKDINNLYEHHVLHSLAI 56
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D G+GGGFPGI +I L++ K + A+ + + T
Sbjct: 57 AKAIRFKEGTEILDFGTGGGFPGIPLAIMFPQCRFRLIDGTGKKIRVATEVAQAIGLT-- 114
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ R +E D I +RA+ L L++ + +++
Sbjct: 115 NVEALHRRGEEEK---GKYDFIVSRAVMQLPDLMKIIRKNIRKEQ 156
>gi|221195056|ref|ZP_03568112.1| 16S rRNA methyltransferase GidB [Atopobium rimae ATCC 49626]
gi|221184959|gb|EEE17350.1| 16S rRNA methyltransferase GidB [Atopobium rimae ATCC 49626]
Length = 244
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 15 LLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
LLN Y++S E + L + L + +K +NL + ++ + H+ DSL + +
Sbjct: 16 LLNIYDLSTTHEQRKFLLTYLELLFEKNKTLNLTRITDIDSALVLHILDSLLLSKFMLCS 75
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ D+G+GGG PGI L G LI+S KK S + ++ + ++ A
Sbjct: 76 EEDSFCDIGTGGGVPGIPLGCVL----GCKGLLIDSIGKKISAVNEFAEQLGIQDRIIAK 131
Query: 131 RI---QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + +M + + ARA+A + ++EY+ P+L +
Sbjct: 132 QMRAEEIEAKMKRSFRFVVARAVAKANVVMEYAEPFLMDQ 171
>gi|70733508|ref|YP_263283.1| 16S rRNA methyltransferase GidB [Pseudomonas fluorescens Pf-5]
gi|82592864|sp|Q4K3A0|RSMG_PSEF5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68347807|gb|AAY95413.1| methyltransferase GidB [Pseudomonas fluorescens Pf-5]
Length = 211
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
+KW+K NL + ++ RH+ DSL V W+D+GSGGG PGI +I
Sbjct: 37 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFIENGC-WLDVGSGGGMPGIPLAILFPES 95
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
+ V ++S KK FL V + EA + I +RA + ++
Sbjct: 96 Q---VTCLDSNGKKTRFLTQVKLELKLENLQVIHSRVEAFTPEQPFNGIISRAFSSMENF 152
Query: 157 LEYSFPW 163
++
Sbjct: 153 TSWTRHL 159
>gi|300780163|ref|ZP_07090019.1| 16S rRNA methyltransferase GidB [Corynebacterium genitalium ATCC
33030]
gi|300534273|gb|EFK55332.1| 16S rRNA methyltransferase GidB [Corynebacterium genitalium ATCC
33030]
Length = 203
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + + + V W RH+ + + + D+GSG G PGI
Sbjct: 17 QAYHDSLATTAAQRGFIGPKEVPRLWDRHIFNCAVIGEAFKEGQRIADIGSGAGLPGIPL 76
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISAR 148
+I ++ + LIE K++++L VV++ V R +E +M+ D +++R
Sbjct: 77 AIARPDLD---ITLIEPLLKRSTYLGEVVEELGLDNVTVIRGRAEEQKKML--FDAVTSR 131
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L L +S P +
Sbjct: 132 AVAPLGKLASWSLPLVRP 149
>gi|227876535|ref|ZP_03994646.1| possible S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Mobiluncus mulieris ATCC
35243]
gi|269977735|ref|ZP_06184695.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris 28-1]
gi|227842849|gb|EEJ53047.1| possible S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Mobiluncus mulieris ATCC
35243]
gi|269934039|gb|EEZ90613.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris 28-1]
Length = 224
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 3/143 (2%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
+ YF L + LV W RH+ + + P + D+GSG G
Sbjct: 30 QRNAMRYFVELLCHEGLERGLVGPKEPARIWSRHILNCAVLSDFLPECTSVADVGSGAGL 89
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG++ +I ++ V LIES +K+ +L +V + E
Sbjct: 90 PGLVLAIARPDLD---VTLIESMDKRCQWLEWVSAELDLDNVRVLRARAEDLHGKEHFPF 146
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
++ARA+ +L TLL + P + K
Sbjct: 147 VTARAVGNLSTLLGWVAPLVRSK 169
>gi|73543038|ref|YP_297558.1| glucose inhibited division protein [Ralstonia eutropha JMP134]
gi|123623785|sp|Q46VX0|RSMG_RALEJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|72120451|gb|AAZ62714.1| Glucose inhibited division protein [Ralstonia eutropha JMP134]
Length = 235
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 14/160 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--- 74
+ + ++ L + L KW+ NL + ++ H+ DSL +
Sbjct: 26 GLALPPDRIDTLFAYLALLRKWNGVYNLTAIRHPDEMLTHHLLDSLAAVPALAEMARSSE 85
Query: 75 --------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSGGG PG+ +I + +V++++ K +FL +
Sbjct: 86 VGGAARGRVLDVGSGGGMPGLPLAISCPDVSVLMVDIVQK---KTAFLTQCRAQLGLSNA 142
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + VI++RA A+L + S L
Sbjct: 143 AAHWGPVERLEDPDKFAVITSRAFAELTDFVNLSGHLLAP 182
>gi|116490228|ref|YP_809772.1| cell division SAM-dependent methyltransferase [Oenococcus oeni
PSU-1]
gi|290889610|ref|ZP_06552700.1| hypothetical protein AWRIB429_0090 [Oenococcus oeni AWRIB429]
gi|122277581|sp|Q04HG5|RSMG_OENOB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116090953|gb|ABJ56107.1| 16S rRNA m(7)G-527 methyltransferase [Oenococcus oeni PSU-1]
gi|290480808|gb|EFD89442.1| hypothetical protein AWRIB429_0090 [Oenococcus oeni AWRIB429]
Length = 242
Score = 85.9 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 10 LRANYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--- 61
+ + + T N +S + + + L++SKK+NL + +D W++H D
Sbjct: 1 MNPDEFVTTLNNQSLPISNRKMVLFQTYLEFLLEYSKKVNLTAIKEPKDIWLKHFYDSLT 60
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + ID+GSG GFPG+ I + + L++S K+ +FL ++ K
Sbjct: 61 PLLYLPDMNKKASLIDIGSGAGFPGVPLKIVN---QKFQLTLLDSLQKRIAFLDQLIDKL 117
Query: 122 AA-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D ARA+++ +TLLE P++
Sbjct: 118 NLKNVETVHGRAEDFAHNLNYREKYDFAIARAVSNTNTLLELLLPFVK 165
>gi|227834358|ref|YP_002836065.1| glucose-inhibited division protein B [Corynebacterium aurimucosum
ATCC 700975]
gi|262183090|ref|ZP_06042511.1| 16S rRNA methyltransferase GidB [Corynebacterium aurimucosum ATCC
700975]
gi|227455374|gb|ACP34127.1| glucose-inhibited division protein B [Corynebacterium aurimucosum
ATCC 700975]
Length = 209
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + V W RH+ + V ++ P + ID+GSG G PGI
Sbjct: 25 QKYHDSLATDGSTRGFIGPREVPRLWERHLINCAVVAEVMPEGATLIDVGSGAGLPGIPL 84
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVIS 146
+I + + LIE K++++L VV V R +E + + D+++
Sbjct: 85 AIARPDLN---ITLIEPLLKRSTYLNEVVDLLGLDNVTVIRGRAEEGPVKKAVKGADIVT 141
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 142 SRAVAPLGKLAKWSLPLVRK 161
>gi|158521205|ref|YP_001529075.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
gi|158510031|gb|ABW66998.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
Length = 246
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 55/150 (36%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V+ LE +W++ +NL + + + +H DS+ P +D
Sbjct: 31 GIAVTDRHLESFSLHAEELARWNRTVNLTAITDPAESAEKHFLDSIVPATFIPPDGTLLD 90
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFPGI + S++ L++ + + ++ E P
Sbjct: 91 IGTGAGFPGIPLKVVFPSLDLTLLDSALKRVTFLLQVLRLLGLERTIVLHRRMEQMERPP 150
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
D I RA L + + P L +K
Sbjct: 151 AARPFDTIICRAFTALPAFVAAALPLLSEK 180
>gi|256823851|ref|YP_003147814.1| methyltransferase GidB [Kangiella koreensis DSM 16069]
gi|256797390|gb|ACV28046.1| methyltransferase GidB [Kangiella koreensis DSM 16069]
Length = 214
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 6 SNSILRANYLLNTYNV---------SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWI 56
NS L L +T+N S+E E+L + L LKW+K NL + + ++
Sbjct: 1 MNSELLK--LQDTFNQKCQNIGIDSSKEESERLLNYLSLLLKWNKAFNLTAITNPKEALD 58
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
H+ DS+ V S +D+G+GGG PGI +I + L+++ +KK FL+
Sbjct: 59 LHLLDSVAVSPAIKDYSSLLDVGTGGGLPGIPLAILNPEKQ---FTLLDTNSKKTRFLKQ 115
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
VV + + + + + I +RA A L +++++ L +
Sbjct: 116 VVYELGLNNVTVINQRVQDFENQSGYACILSRAFASLSDMVQWTGHLLTE 165
>gi|227487668|ref|ZP_03917984.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227541378|ref|ZP_03971427.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227092362|gb|EEI27674.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227182929|gb|EEI63901.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 205
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+Y L + + W RH+ L+ +D+GSG G PG+ +
Sbjct: 21 AYYDLLATDGLTRGFMGPREKDRLWDRHILPCALTESLYAEGKTVVDVGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
I ++ V L+E K++ FLR V +K A E + D ++RA+
Sbjct: 81 IARPDLQ---VTLLEPLLKRSVFLREVAEKLGLENVHVARGRAEDKP-VGKMDYATSRAV 136
Query: 151 ADLDTLLEYSFPWLYQ 166
A L L ++S P + +
Sbjct: 137 APLWKLAKWSLPLVRK 152
>gi|118602125|ref|YP_903340.1| methyltransferase GidB [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567064|gb|ABL01869.1| 16S rRNA m(7)G-527 methyltransferase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 190
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ E + KL + L +KW+K NL + T+E +H+ DSL V S+ +D
Sbjct: 2 NIKLESEQISKLMNYLKLIIKWNKSYNLSAIRTMEKGVYKHLLDSLSVIAYIKDKSL-LD 60
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G PGI+ SI + LV ++++ KK F+++ + + E Q
Sbjct: 61 VGSGAGLPGIVISIMRPEL---LVTVLDTVGKKCRFMQFAKTQLQLKNLNVIKNRVENYQ 117
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ + I +RA + ++ +L+ + L
Sbjct: 118 IEFCFEQIISRAFSKVEKILKLTQHLL 144
>gi|328883708|emb|CCA56947.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Streptomyces venezuelae ATCC 10712]
Length = 246
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 35 RYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 94
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E IT V++ARA
Sbjct: 95 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEMLGKITPVHVVTARA 151
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 152 VAPLDRLAGWGVPLLRP 168
>gi|332286172|ref|YP_004418083.1| glucose inhibited division protein B [Pusillimonas sp. T7-7]
gi|330430125|gb|AEC21459.1| glucose inhibited division protein B [Pusillimonas sp. T7-7]
Length = 223
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 12/147 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--------FQLHPYPSIWIDL 78
+ L + +W+K NL + E ++H+ DSL + + + +D+
Sbjct: 27 DTLLAYLDQLQRWNKTYNLTALRDPEQMLVQHLIDSLSIVKPISKILDKNTVTENTVVDV 86
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG G PG++ +I + ++ +E K + V++ + R++ P
Sbjct: 87 GSGAGLPGVVLAIMQPDWQVHCIDAVEKKMAFVRQVSGVLRLRNLQA--HHKRVESMPPY 144
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
D++ +RA A L + +
Sbjct: 145 --QADIVVSRAFASLTDFASLAGHHVA 169
>gi|269468171|gb|EEZ79870.1| methyltransferase GidB [uncultured SUP05 cluster bacterium]
Length = 204
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 6 SNSILRANYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
N + L + + +S + ++L + L KW+K NL + +E +H+
Sbjct: 1 MNEL--KQLLQDGADQMGLLLSDQQSDQLLDYLMLIFKWNKTYNLSAIRDLESGVKKHLL 58
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + + +D+G+G G PGI+ +I + V++++S KK F+++ +
Sbjct: 59 DSLSILPYIGNEPL-LDVGAGAGLPGIVLAIVRPEL---SVSVLDSVGKKCRFMQFAKTQ 114
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ E Q + I++RA A++D L+ + L
Sbjct: 115 LKLDNLTVVNQRVEDFQAMKCFTQITSRAFAEVDKTLKLTQHLL 158
>gi|325856871|ref|ZP_08172369.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola CRIS 18C-A]
gi|327314584|ref|YP_004330021.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola F0289]
gi|325483244|gb|EGC86221.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola CRIS 18C-A]
gi|326944705|gb|AEA20590.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola F0289]
Length = 207
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SL 63
I++ + +++ E++ L+ W+ KIN+VS +++ + H+ ++
Sbjct: 1 MTEIIKKYFP----HLTHRQEEQIAALDVLYHDWNAKINVVSRKDIDNLYEHHILHSLAI 56
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D G+GGGFPGI +I LI+ KK + V
Sbjct: 57 ARRIRFREGTNVLDFGTGGGFPGIPLAILFPESN---FKLIDGTGKKVKVAKEVADSIGL 113
Query: 124 -RGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
R +E D I +RA+ L L++
Sbjct: 114 DNVLPVHQRGEEEK---GKFDFIVSRAVMPLPDLMKI 147
>gi|260424977|ref|ZP_05733847.2| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
gi|260403779|gb|EEW97326.1| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
Length = 244
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 8 SILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ ++ T + + + K+ + + + S+K+NL E+ ++++ DSL V
Sbjct: 6 DMMTVREIVETLGLAADEDAVRKMAEYNAMVIAMSRKMNLTGIKDAEESLVKNIYDSLTV 65
Query: 66 F--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + P +DLG+G GFPGI +I ++ V L++S KK F+ K
Sbjct: 66 YEEKYFPKNGRMLDLGTGAGFPGIPLAILRPDMQ---VVLVDSVLKKLVFIENAAAKLGI 122
Query: 124 -RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
K+ R +E + T D+++ARA+ L + E+ P++ +
Sbjct: 123 KNIKILHIRAEEGGRRRKTRETFDMVTARAVKMLPVIAEWGIPFVKE 169
>gi|269129162|ref|YP_003302532.1| methyltransferase GidB [Thermomonospora curvata DSM 43183]
gi|268314120|gb|ACZ00495.1| methyltransferase GidB [Thermomonospora curvata DSM 43183]
Length = 210
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + L+ V+ W RH+ + V ++ P + IDLGSG G PG++
Sbjct: 10 ERYAEFLADAGVIRGLIGPREVDRLWERHLINCAVVAEMVPQGATVIDLGSGAGLPGLVL 69
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I + V L+E ++ FL V+ E DV++ARA
Sbjct: 70 AIARPDL---SVTLLEPLLRRTKFLTEAVELLELENVEVHRARAEEVAGDYQVDVVTARA 126
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L+ ++ P L
Sbjct: 127 VAPLDRLVGWALPLLRP 143
>gi|281425234|ref|ZP_06256147.1| 16S rRNA methyltransferase GidB [Prevotella oris F0302]
gi|281400700|gb|EFB31531.1| 16S rRNA methyltransferase GidB [Prevotella oris F0302]
Length = 209
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 66/165 (40%), Gaps = 11/165 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
I+ + +++ + L+ W+ KIN++S + + + HV SL +
Sbjct: 1 MTDIITKYFP----HLTEVQSRQFAMLDALYRDWNSKINVISRKDINNLYEHHVLHSLAI 56
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D G+GGGFPGI +I L++ K A+ + + T
Sbjct: 57 AKAIRFKEGTEILDFGTGGGFPGIPLAIMFPQCRFRLIDGTGKKICVATEVAQAIGLT-- 114
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ R +E D I +RA+ L L++ + +++
Sbjct: 115 NVEALHRRGEEEK---GKYDFIVSRAVMQLPDLMKIIRKNIRKEQ 156
>gi|189485616|ref|YP_001956557.1| glucose-inhibited cell division protein GidB [uncultured Termite
group 1 bacterium phylotype Rs-D17]
gi|170287575|dbj|BAG14096.1| glucose-inhibited cell division protein GidB [uncultured Termite
group 1 bacterium phylotype Rs-D17]
Length = 276
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 70/177 (39%), Gaps = 35/177 (19%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--------------- 65
S+ET +K E +++ KW+KK NL+S + D RH DSL
Sbjct: 26 FSKETRKKFETYFYELNKWNKKFNLISFKNIRDLVYRHFCDSLYSAKAISDILTVYRLSI 85
Query: 66 --------------FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
+ DLG+G G PGI I L I+ + LIES KK
Sbjct: 86 YSKRKRKREGAGRKQKSAESAFKVADLGTGSGMPGIPVKIALPCIK---LTLIESITKKC 142
Query: 112 SFLRYVVQKTAARGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
FL + K ++ R +E Q D I +RA++ L LE S P L
Sbjct: 143 RFLNNINNKLGFNTEILNKRAEEIGQNTSYRQQYDFILSRAVSKLSPNLEISIPLLK 199
>gi|121996811|ref|YP_001001598.1| methyltransferase GidB [Halorhodospira halophila SL1]
gi|189045853|sp|A1WSY4|RSMG_HALHL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|121588216|gb|ABM60796.1| 16S rRNA m(7)G-527 methyltransferase [Halorhodospira halophila SL1]
Length = 209
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE+LE F L ++W++ NL ++ VE RH+ DS V + + D+GSG GFP
Sbjct: 22 LERLEGFLSLLMRWNRAYNLTAARDVETLIDRHLLDS-LVVRRYLPAGALADVGSGAGFP 80
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDV 144
G++ ++ V LI+S KK FLR + +V R++ V
Sbjct: 81 GLVLALIEPD---RSVTLIDSNGKKTRFLRQCATELGLHRVQVRQARMEALDD--GDFAV 135
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
++ARA+A L TL+ + L
Sbjct: 136 VTARAVAPLATLIPGTRGLLAP 157
>gi|326329119|ref|ZP_08195448.1| 16S rRNA methyltransferase GidB [Nocardioidaceae bacterium Broad-1]
gi|325953201|gb|EGD45212.1| 16S rRNA methyltransferase GidB [Nocardioidaceae bacterium Broad-1]
Length = 237
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE E + L+ V W RH+ + + ++ P D+GSG G P
Sbjct: 20 LELAERYAAWLADAGVVRGLIGPREVPRLWDRHILNCAVLGEVIPEGVAVADIGSGAGLP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G++ +I ++ + LIE ++ +FL V + +A DV+
Sbjct: 80 GLVLAIARPDLQ---ITLIEPLLRRTTFLEEVAEDLGLENVTVLRGRADAFHGELGFDVV 136
Query: 146 SARALADLDTLLEYSFPWL 164
++RA+A L LL++S P +
Sbjct: 137 TSRAVAGLGKLLDWSMPLV 155
>gi|257785162|ref|YP_003180379.1| methyltransferase GidB [Atopobium parvulum DSM 20469]
gi|257473669|gb|ACV51788.1| methyltransferase GidB [Atopobium parvulum DSM 20469]
Length = 252
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 13 NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VF 66
N LL+ Y + + ++L L ++ ++++NL ++++D I H+ DSL
Sbjct: 17 NELLHNYGIDSTELQRKQLLGHIELLIEINERLNLTRITSIDDALILHILDSLLPLKVCD 76
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +ID+G+GGGFPG+ +I ++ L++S KK + ++ ++ + K
Sbjct: 77 EFISCNRNYIDIGTGGGFPGLPLAIMSNNK----TLLVDSIGKKVNAVQSMINEIGLEEK 132
Query: 127 VFAC--RIQEAPQ-MITTCDVISARALADLDTLLEYSFPWLY 165
V A R +E P D ++ RA+A + LLEY+ P+L
Sbjct: 133 VKAEKLRAEEIPNTYKQKFDFVTFRAVAKTNILLEYAEPFLA 174
>gi|15606707|ref|NP_214087.1| glucose inhibited division protein B [Aquifex aeolicus VF5]
gi|3913740|sp|O67522|RSMG_AQUAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|2983927|gb|AAC07476.1| glucose inhibited division protein B [Aquifex aeolicus VF5]
Length = 196
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
++R + + + E K + L+W+K NL S E+ RH DS+ V +
Sbjct: 1 MIRELFEKEGFTLDEEQERKFSIYLQELLRWNKVHNLTSIKKPEEIVRRHFIDSVSVVRC 60
Query: 69 HPYP------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+GSG GFPG+ I L I+ + LIES +KK SFL Y+ K
Sbjct: 61 FERIGLDLRGKHFADVGSGAGFPGVPLKIYLKDIK---LTLIESVSKKCSFLEYLKIKLN 117
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+V R ++ DV+ ARAL + + + E
Sbjct: 118 EDYRVLCTRAEKVE---EKFDVVLARALGEFEEVKEILEKL 155
>gi|291446138|ref|ZP_06585528.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
15998]
gi|291349085|gb|EFE75989.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
15998]
Length = 246
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 35 RYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 94
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 95 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGTLQPVQVVTARA 151
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 152 VAPLDRLAGWGVPLLKP 168
>gi|239942677|ref|ZP_04694614.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
15998]
gi|239989136|ref|ZP_04709800.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
11379]
Length = 238
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 87 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGTLQPVQVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLKP 160
>gi|213962694|ref|ZP_03390955.1| 16S rRNA methyltransferase GidB [Capnocytophaga sputigena Capno]
gi|213954689|gb|EEB66010.1| 16S rRNA methyltransferase GidB [Capnocytophaga sputigena Capno]
Length = 205
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLH 69
+L + ++S + ++ L+ KW+ +IN++S ++DF+ RHV SL +
Sbjct: 2 EIILKYFPSLSEQQQQQFTQLKTLYEKWNAQINVISRKDIDDFYERHVLHSLAIAKCIQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPGI +I + + L++S KK ++ VV+
Sbjct: 62 RDGTQILDVGTGGGFPGIPLAIMFPNCQ---FTLVDSIGKKIKVVQEVVKALKLTN--VT 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A ++ T D + +RA+ + + PW+ K
Sbjct: 117 AMQIRAEELKDTYDFVVSRAVTQMKDFV----PWVKGK 150
>gi|297184150|gb|ADI20269.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 216
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
+++ + L+ +W+ KIN++S +E F+ +HV + +D
Sbjct: 13 DLTERQRHQFAALQDLYTEWNAKINVISRKDMESFYEKHVLHSLGIAKVYSFKSGQKVLD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGGFPGI +I + LV+ I K K + A + A +
Sbjct: 73 VGTGGGFPGIPLAILFPETQFHLVDSIGKKIKVVLAVAE-----ALDLENVRADHGRAEE 127
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA+ + + PW+ K
Sbjct: 128 FKGPYDFVVSRAVTQMQRFV----PWIKGK 153
>gi|297193301|ref|ZP_06910699.1| methyltransferase gidB [Streptomyces pristinaespiralis ATCC 25486]
gi|197718382|gb|EDY62290.1| methyltransferase gidB [Streptomyces pristinaespiralis ATCC 25486]
Length = 246
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 35 RYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 94
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 95 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGKVPPVHVVTARA 151
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 152 VAPLDRLAGWGVPLLRP 168
>gi|303256378|ref|ZP_07342392.1| 16S rRNA methyltransferase GidB [Burkholderiales bacterium 1_1_47]
gi|331001496|ref|ZP_08325114.1| 16S rRNA methyltransferase GidB [Parasutterella excrementihominis
YIT 11859]
gi|302859869|gb|EFL82946.1| 16S rRNA methyltransferase GidB [Burkholderiales bacterium 1_1_47]
gi|329568225|gb|EGG50042.1| 16S rRNA methyltransferase GidB [Parasutterella excrementihominis
YIT 11859]
Length = 214
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP- 72
L ++ E + KL F L LKW+K NL + D +H+ DSL +
Sbjct: 12 LERLGITAGEEEVSKLISFSELLLKWNKVYNLTAIRDEGDVIRKHLLDSLTLLPYFKLYG 71
Query: 73 ----SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
+D+G GGG P I SI L + NLI++ NKK +F+R V +
Sbjct: 72 SEVGCRTLDVGCGGGLPAIPLSIFL---KDFDFNLIDTVNKKITFVRQAVIQLKLPNVNA 128
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R++ + ++IS RA + L + + + + +
Sbjct: 129 FNERVENFHPLK-PFNLISCRAFSSLASFVTLTEHLIDE 166
>gi|308235527|ref|ZP_07666264.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis ATCC 14018]
gi|311114009|ref|YP_003985230.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis ATCC 14019]
gi|310945503|gb|ADP38207.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis ATCC 14019]
Length = 236
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 7 NSILRANYLLNTYNVSR---ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N+ + L N+ +S + L+K + F+ K LV + W RH+ +S
Sbjct: 12 NTQETIDELENSPLLSEVLGDALDKCKMFHVKLQKEGLLRGLVGPRDMSILWERHILNSA 71
Query: 64 RVFQLHPYPSIWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
V D+GSGGGFPGI+ + L + V LIE ++ +L+
Sbjct: 72 AVVPFIKEAIKKSKKKSIADVGSGGGFPGIVIAACLPDCD---VTLIEPMERRVLWLKEC 128
Query: 118 VQKTAA-RGKVFACRIQEAPQMITT-----CDVISARALADLDTLLEYSFPWL 164
V+ +F R E + I + DV++ RA+A + L ++ P L
Sbjct: 129 VELMGLDNVTIFHGRSDEIIEKIKSHDISPFDVVTCRAVAPMTKLAGWTIPLL 181
>gi|38234911|ref|NP_940678.1| glucose-inhibited division protein B [Corynebacterium diphtheriae
NCTC 13129]
gi|55976428|sp|Q6NE98|RSMG_CORDI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|38201176|emb|CAE50900.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 223
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K ++ L + V W RH+ + + + D+GSG G P
Sbjct: 30 VDKAYAYHELLATDGSTRGFIGPREVPKLWSRHLLNCAVIGEAMDENIRVADIGSGAGLP 89
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTC 142
GI +I + + LIE K++ FL V +K V R +E + +
Sbjct: 90 GIPLAIARPDL---TITLIEPLLKRSVFLGEVKEKLELDNVTVIRGRAEEKAVREQLGLV 146
Query: 143 DVISARALADLDTLLEYSFPWLY 165
DV ++RA+A L L +S P +
Sbjct: 147 DVATSRAVAPLGKLAGWSLPLVR 169
>gi|313203170|ref|YP_004041827.1| 16S rRNA m(7)g-527 methyltransferase [Paludibacter propionicigenes
WB4]
gi|312442486|gb|ADQ78842.1| 16S rRNA m(7)G-527 methyltransferase [Paludibacter propionicigenes
WB4]
Length = 206
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+L + +++ + + Y L+ +W+ KIN++S +E+ + HV ++
Sbjct: 2 EQILQYFPSLNEIQKAQFQALYDLYFEWNAKINVISRKDIENLYEHHVLHSLAIAEIIHF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +D+G+GGGFPGI +I L++ I K K + + + K
Sbjct: 62 QPGSTILDVGTGGGFPGIPLAILFPESNFVLIDSIGKKIKVGTEVATAIGLKNITLKHL- 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA+ L L++ + +K
Sbjct: 121 ----RVQDEKGKFDFVVSRAVMPLGDLVKLVQKNISKK 154
>gi|311742157|ref|ZP_07715967.1| 16S rRNA methyltransferase GidB [Aeromicrobium marinum DSM 15272]
gi|311314650|gb|EFQ84557.1| 16S rRNA methyltransferase GidB [Aeromicrobium marinum DSM 15272]
Length = 194
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E E + + + ++ V W RH+ + + V P + D+GSG G
Sbjct: 7 ENWETAQAYADILATDGVARGMIGPREVPRLWDRHLWNCVVVVPRIPAGATVADVGSGAG 66
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG++ +I IE L+E ++ +FL VV++ A + + D
Sbjct: 67 LPGLVWAIARPDIEM---TLVEPLLRRTTFLTEVVERLGLSNVTV--DRSRAEDVSSVFD 121
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
V++ARA+A +D L + P + +
Sbjct: 122 VVTARAVAPMDRLAGWCLPLVRE 144
>gi|33591277|ref|NP_878921.1| glucose inhibited division protein B [Bordetella pertussis Tohama
I]
gi|33594725|ref|NP_882368.1| glucose inhibited division protein B [Bordetella parapertussis
12822]
gi|55976491|sp|Q7W0S9|RSMG_BORPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976492|sp|Q7W2I0|RSMG_BORPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33564801|emb|CAE39743.1| glucose inhibited division protein B [Bordetella parapertussis]
gi|33570919|emb|CAE40382.1| glucose inhibited division protein B [Bordetella pertussis Tohama
I]
gi|332380679|gb|AEE65526.1| glucose inhibited division protein B [Bordetella pertussis CS]
Length = 230
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---------PSIW 75
+KL + +W++ NL + ++H+ DSL V
Sbjct: 30 QQQKLLRYIEQMQRWNRTYNLTAIRDPGQMLVQHLFDSLSVVAPLERGLPAAGSGARVKL 89
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+GSGGG PG++ +I + + V +++ KK +F+R + + RI++
Sbjct: 90 FDVGSGGGLPGVVLAIMRAHWD---VTCVDAVEKKTAFVRQMAGALGLPNLQAAHTRIEQ 146
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
CDV+ +RA A L + + + +
Sbjct: 147 LEP--AQCDVVISRAFASLQDFAKLAGRHVRE 176
>gi|309811325|ref|ZP_07705112.1| 16S rRNA methyltransferase GidB [Dermacoccus sp. Ellin185]
gi|308434632|gb|EFP58477.1| 16S rRNA methyltransferase GidB [Dermacoccus sp. Ellin185]
Length = 255
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L+ V W RHV + V + D+G+G G PG++ +
Sbjct: 41 RYVDALCDTGVSHGLMGPREVPRMWERHVLNCAVVHPGIARGAHVADIGAGAGLPGLVLA 100
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
I + + L+E ++ ++L VV++ +V R E T DV+++RA
Sbjct: 101 IARPDL---TMTLVEPLLRRTTWLADVVEELDLPNVEVVRARADELWGQRT-FDVVTSRA 156
Query: 150 LADLDTLLEYSFPWLYQ 166
+A + L +S P + +
Sbjct: 157 VARIGELARWSLPLVSR 173
>gi|217967937|ref|YP_002353443.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
gi|217337036|gb|ACK42829.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
Length = 240
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL+ + EK +Y +W++KINL S E+ ++H DSL
Sbjct: 7 EILKEKVNELNLKLDPLQEEKFYLYYKALKEWNRKINLTSLEGEEEIILKHFVDSLACII 66
Query: 68 LHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ ID+G+G GFPGI I E + L+ES+ KK FL + +
Sbjct: 67 PIKDENIEKIIDIGTGAGFPGIPLKIYN---EKYKLTLLESQKKKVLFLEEITKILKLSN 123
Query: 125 GKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R + P+ D+ AR +A +LEY+ P++
Sbjct: 124 VEIIWDRAENLGKNPKYRENFDLALARGVAKPHIVLEYAIPFVK 167
>gi|213966254|ref|ZP_03394438.1| 16S rRNA methyltransferase GidB [Corynebacterium amycolatum SK46]
gi|213951106|gb|EEB62504.1| 16S rRNA methyltransferase GidB [Corynebacterium amycolatum SK46]
Length = 227
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E ++ ++ + + L+ W RH+ +S V + + D+GSG G
Sbjct: 32 ENADRAYRYHSWLAEEATVRGLIGPRETPKLWDRHIINSAVVGEAIGKGLVVADIGSGAG 91
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMIT 140
PGI ++ ++ V L+E ++ +FL VV+ V R +E +
Sbjct: 92 LPGIPLALARPDLK---VVLVEPLLRRTTFLNEVVKDLELDNVTVVRGRAEEKAVRAEVG 148
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
DV+++RA+A L L +S P +
Sbjct: 149 QVDVVTSRAVAPLGKLAGWSLPLVK 173
>gi|298253036|ref|ZP_06976828.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis 5-1]
gi|297532431|gb|EFH71317.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis 5-1]
Length = 236
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------PYPSIWID 77
E LEK + F+ + L+ + W RH+ +S V D
Sbjct: 32 EALEKCKLFHVKLQQEGLIRGLIGPRDMNILWERHILNSAAVVPFIKEAIVGRKNKRVAD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGGFPG++ + L + V LIE ++ +LR V +F R E
Sbjct: 92 VGSGGGFPGLVLAACLPDYD---VTLIEPMERRVDWLRECVALMKLKNVTIFHGRSDEVI 148
Query: 137 QMITT-----CDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ RA+A + L ++ P L +
Sbjct: 149 DKVKSHEIPAFDVVTCRAVAPMTKLAGWTIPLLNK 183
>gi|121608051|ref|YP_995858.1| 16S rRNA methyltransferase GidB [Verminephrobacter eiseniae EF01-2]
gi|189040730|sp|A1WGT3|RSMG_VEREI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|121552691|gb|ABM56840.1| methyltransferase GidB [Verminephrobacter eiseniae EF01-2]
Length = 239
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 27/164 (16%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---- 75
+ +++L F L KW++ NL + ++ +H+ DSL
Sbjct: 24 GLDAAQIDRLMDFLALLQKWNRVYNLTALQDPQEMLTQHLLDSLAALAPLRRQLAHLAHL 83
Query: 76 ------------------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+D+GSG G PG++ +I ++ V+ ++S KKA+F+ V
Sbjct: 84 AHSTGLAGPGQGAGPRRLLDVGSGAGLPGVVFAICCPQLD---VHCVDSVGKKAAFIGQV 140
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ R + T ++I RA A L + ++
Sbjct: 141 ALQLRLRN--LHGVHARVETLTTPFEIICCRAFAALPDFVRWTR 182
>gi|84625949|ref|YP_453321.1| glucose-inhibited division protein B [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|123520479|sp|Q2NXD0|RSMG_XANOM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84369889|dbj|BAE71047.1| methyltransferase gidB [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 212
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + RH+ DSL + + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPRAMVTRHLLDSLAMQPYIASGML-ADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KK F+R ++ R A EA T D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKVRFMREALRHLELRNARVAESRAEALDEPTAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDKLAGIIAVGGHLLRP 164
>gi|145221427|ref|YP_001132105.1| methyltransferase GidB [Mycobacterium gilvum PYR-GCK]
gi|315446821|ref|YP_004079700.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. Spyr1]
gi|189045862|sp|A4T4S9|RSMG_MYCGI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145213913|gb|ABP43317.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium gilvum PYR-GCK]
gi|315265124|gb|ADU01866.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. Spyr1]
Length = 227
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + + L+ V+ W RH+ + + +L D+GSG G PGI +
Sbjct: 26 RYAEILAGAGVERGLLGPREVDRIWDRHILNCAVIGELVEAGERVADVGSGAGLPGIPLA 85
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
+ V LIE +++ FLR ++ V R ++ + + DV+ +R
Sbjct: 86 LARPD---VHVVLIEPLLRRSDFLREAIEDVGIECSVVRGRAEDRSVREEVGPTDVVVSR 142
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P L
Sbjct: 143 AVASLDKLAKWSSPLLRP 160
>gi|206900779|ref|YP_002251265.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
gi|226797823|sp|B5YFF7|RSMG_DICT6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|206739882|gb|ACI18940.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
Length = 240
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
ILR ++ EK +Y +W++KINL S E+ ++H DSL
Sbjct: 8 ILREKVSELNLSLDPLQEEKFYLYYMALKEWNRKINLTSLEGEEEIILKHFVDSLSCIIP 67
Query: 69 HPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ ID+G+G GFPGI I E + L+ES+ KK FL +++
Sbjct: 68 IRNENIERIIDIGTGAGFPGIPIKIYD---EKYKLTLLESQKKKILFLEELIKILELSDV 124
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R + P+ D+ AR +A + +LEY+ P++
Sbjct: 125 EIVWDRAENLGKDPRYREQFDLALARGVAKPNIVLEYALPFVK 167
>gi|300115602|ref|YP_003762177.1| methyltransferase GidB [Nitrosococcus watsonii C-113]
gi|299541539|gb|ADJ29856.1| methyltransferase GidB [Nitrosococcus watsonii C-113]
Length = 214
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 4/155 (2%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL LL + + ++ L + L KW++ NL + E+ +HV DSL + +
Sbjct: 8 ILEKGLLLLGVELDQSQVKLLLAYLQLLEKWNQHYNLTAIKNPEEMISKHVLDSLSI-EP 66
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +D+GSG G PGI ++ E L++S KK FL +
Sbjct: 67 YLEGRRILDVGSGAGLPGIPLAVAHPGCE---FVLLDSNAKKTRFLFQASVELGLSNISV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
C E + D I RA L + +
Sbjct: 124 VCERVEVYRPSHLFDTIVTRAFTKLVDFVNQAEHL 158
>gi|67922987|ref|ZP_00516481.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
gi|67855135|gb|EAM50400.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
Length = 241
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-----FQLHPYPSIWI 76
++E LE+ E Y + +++INL + DF +H+ DSL F + +
Sbjct: 19 TQEQLEQWEKLYQEIILINRQINLTRITEPNDFLEKHLWDSLAGVIGLDFLNYEDSLKVV 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACRI 132
D+G+G GFPG+ SI + + L++S KK + ++ ++ A I
Sbjct: 79 DIGTGAGFPGLPISIIFPHWQ---LTLLDSTRKKINVIKLFLEALKLNNSQTFIGRAEDI 135
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
P+ D+ RA+ + EY P+L
Sbjct: 136 GHIPEHREQYDLGLIRAVGEPSVCAEYVLPFLK 168
>gi|325917484|ref|ZP_08179690.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas vesicatoria ATCC
35937]
gi|325536278|gb|EGD08068.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas vesicatoria ATCC
35937]
Length = 212
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + ++ DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYIASGTL-ADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLALDNARVAESRAEALDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L +++ L
Sbjct: 147 ALDTLAGIIDVGGHLLRP 164
>gi|148361202|ref|YP_001252409.1| glucose inhibited division protein B [Legionella pneumophila str.
Corby]
gi|296108538|ref|YP_003620239.1| glucose inhibited division protein B [Legionella pneumophila
2300/99 Alcoy]
gi|166224596|sp|A5II63|RSMG_LEGPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148282975|gb|ABQ57063.1| glucose inhibited division protein B [Legionella pneumophila str.
Corby]
gi|295650440|gb|ADG26287.1| glucose inhibited division protein B [Legionella pneumophila
2300/99 Alcoy]
Length = 208
Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNH-IIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S KK SFL V ++ + E D + +RA + L+ ++
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQGFDTVISRAFSSLEQMI 151
Query: 158 EYSFPWLYQ 166
+++ + Q
Sbjct: 152 KWTEHLVAQ 160
>gi|326442155|ref|ZP_08216889.1| 16S rRNA methyltransferase GidB [Streptomyces clavuligerus ATCC
27064]
Length = 240
Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + L + L+ V W RH+ + + ++ P D+GSG G
Sbjct: 21 EFFPEAVRYAELLADAGVRRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAG 80
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PGI ++ ++ + L+E ++ +FL+ VV+ V R +E +
Sbjct: 81 LPGIPLALVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGKLPPV 137
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+A LD L + P L
Sbjct: 138 HVVTARAVAPLDRLAGWGVPLLRP 161
>gi|254391434|ref|ZP_05006636.1| methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
gi|294813734|ref|ZP_06772377.1| Methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
gi|197705123|gb|EDY50935.1| methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
gi|294326333|gb|EFG07976.1| Methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
Length = 248
Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + L + L+ V W RH+ + + ++ P D+GSG G
Sbjct: 29 EFFPEAVRYAELLADAGVRRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAG 88
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PGI ++ ++ + L+E ++ +FL+ VV+ V R +E +
Sbjct: 89 LPGIPLALVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGKLPPV 145
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+A LD L + P L
Sbjct: 146 HVVTARAVAPLDRLAGWGVPLLRP 169
>gi|229491187|ref|ZP_04385015.1| 16S rRNA methyltransferase GidB [Rhodococcus erythropolis SK121]
gi|229321925|gb|EEN87718.1| 16S rRNA methyltransferase GidB [Rhodococcus erythropolis SK121]
Length = 223
Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E +Y + L+ V W RH+ + + +L +D+GSG G PGI
Sbjct: 29 ERYYQSLATDGVERGLIGPREVPRLWERHLLNCAVIGELIAEGESVVDVGSGAGLPGIPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E +++ +L ++ V R +E + DV+++
Sbjct: 89 AIARPDLK---VTLVEPLLRRSVYLAEFIESNGLDVLVVRGRAEESGVVKEAGGADVVTS 145
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L+ L +S P +++
Sbjct: 146 RAVAPLEKLARWSLPLIHE 164
>gi|226309511|ref|YP_002769473.1| methyltransferase GidB [Rhodococcus erythropolis PR4]
gi|226188630|dbj|BAH36734.1| methyltransferase GidB [Rhodococcus erythropolis PR4]
Length = 226
Score = 84.7 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E +Y + L+ V W RH+ + + +L +D+GSG G PGI
Sbjct: 32 ERYYQSLATDGVERGLIGPREVPRLWERHLLNCAVIGELIAEGESVVDVGSGAGLPGIPL 91
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E +++ +L ++ V R +E + DV+++
Sbjct: 92 AIARPDLK---VTLVEPLLRRSVYLAEFIESNGLDVLVVRGRAEESGVVKEAGGADVVTS 148
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L+ L +S P +++
Sbjct: 149 RAVAPLEKLARWSLPLIHE 167
>gi|194334832|ref|YP_002016692.1| 16S rRNA methyltransferase GidB [Prosthecochloris aestuarii DSM
271]
gi|194312650|gb|ACF47045.1| methyltransferase GidB [Prosthecochloris aestuarii DSM 271]
Length = 221
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 6/153 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+ + +E+LE + L ++ INLVS IRHV SL V +P+
Sbjct: 19 HGLALDTRQIEQLEEYARLLESINRSINLVSRKEESSLLIRHVFHSLLVGFHYPFQQGEK 78
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG+GGG PGI +I + LI++ KK R ++ + V A +I+
Sbjct: 79 VLDLGTGGGLPGIPLAIAYPETD---FLLIDATGKKIDACREMITTLGLKN-VHAKKIRA 134
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
DV+ +R +A L L Y+ L +
Sbjct: 135 EELTGLMFDVVLSRQVAPLRKLCRYAEKILRPE 167
>gi|312623582|ref|YP_004025195.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
gi|312204049|gb|ADQ47376.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
Length = 238
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ +L + N V L + L L+ +K NL + E+F I+H+ DSL
Sbjct: 3 LLDKVLEYYKVKNPLVV----KHLLIKYMNLVLEKNKHFNLTAIENEEEFVIKHIADSLS 58
Query: 65 VFQLHPYPSIW-----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ + + ID+GSG G PG+ I + ++ L + + K K + + +
Sbjct: 59 LLKFIEQENSNQNPVAIDIGSGFGAPGLFVKIAMPNMNVFLNDSNKKKCKFMNEAKESLG 118
Query: 120 KTAARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ A + + D + ARA+ L+ L EY+ P L
Sbjct: 119 ISGVNVVCERAEVLGRKEEFREKFDFVFARAVDRLNVLCEYALPLLK 165
>gi|281358437|ref|ZP_06244918.1| methyltransferase GidB [Victivallis vadensis ATCC BAA-548]
gi|281315060|gb|EFA99092.1| methyltransferase GidB [Victivallis vadensis ATCC BAA-548]
Length = 221
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI----DLGSGGGFP 85
+ Y L ++ +K +NL E+F I+HV DSL + + P + D+G G GFP
Sbjct: 25 DKLYELVIETNKTMNLTRIVEPEEFRIKHVADSLAIAREFPEFASEYLKVADIGCGAGFP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA---CRIQEAPQMITT 141
++ ++ +++ V I+S KKA+F+ + Q V C + +
Sbjct: 85 SLVLAMAFPNLK---VTPIDSTGKKAAFVDHTAQALGLRNVNVVNGRSCELNRRSRFKHQ 141
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV++ARA+A + + + +K
Sbjct: 142 FDVVTARAVAPAPVIYGDADNFPKRK 167
>gi|218246901|ref|YP_002372272.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
gi|218167379|gb|ACK66116.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
Length = 240
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 6/154 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---- 73
+N + ++ + Y + +++INL + DFW +H+ DSL +
Sbjct: 14 NWNPNPSQQKQWDKLYHEIILANRQINLTRITEPNDFWEKHLWDSLAGILDIEIINLEQS 73
Query: 74 -IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACR 131
ID+G+G GFPGI I + + L + K L + + A
Sbjct: 74 LKVIDIGTGAGFPGIPIGIVCPNWQVTLFDSTRKKINFIKILLEELSLKNCHTLIGRAEE 133
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
I + P + D+ RA+ + EY+ P L
Sbjct: 134 IGQNPSHRESYDLALIRAVGEASVCAEYTLPLLK 167
>gi|120407002|ref|YP_956831.1| 16S rRNA methyltransferase GidB [Mycobacterium vanbaalenii PYR-1]
gi|189045867|sp|A1TI25|RSMG_MYCVP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119959820|gb|ABM16825.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium vanbaalenii
PYR-1]
Length = 227
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LEK + + + L+ VE W RH+ + V +L D+GSG G P
Sbjct: 21 LEKAHLYARILAGAGVERGLLGPREVERLWDRHILNCAVVGELLQPGERVADIGSGAGLP 80
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCD 143
GI ++ V LIE +++ FLR +++ V R ++ + + T D
Sbjct: 81 GIPLALARPD---VHVILIEPLLRRSEFLRETIEEIGIDCDVVRGRAEDRSVREEVGTTD 137
Query: 144 VISARALADLDTLLEYSFPWLY 165
V+ +RA+A LD L ++S P L
Sbjct: 138 VVVSRAVASLDKLTKWSSPLLR 159
>gi|271970550|ref|YP_003344746.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division-like protein [Streptosporangium roseum DSM
43021]
gi|270513725|gb|ACZ92003.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division-like protein [Streptosporangium roseum DSM
43021]
Length = 236
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + + E F L L+ V W RH+ + V + P +D+GS
Sbjct: 16 FTGDAWSRAETFAELLAGPGVVRGLLGPREVPRIWDRHLLNCAVVAEAVPADVRLVDIGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
G G PG++ +I I V L+E ++ FL V+ +V R +E
Sbjct: 76 GAGLPGLVLAIVRPDI---TVTLLEPLLRRTVFLEECVEALKLDNVEVLRGRAEEFAGRR 132
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
DV SARA+A L+ LL++S P L +
Sbjct: 133 E-FDVASARAVAPLERLLKWSLPLLRE 158
>gi|289666141|ref|ZP_06487722.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670765|ref|ZP_06491840.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 212
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + ++ DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYIASGTL-ADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ R A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|288927301|ref|ZP_06421148.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 317 str.
F0108]
gi|288330135|gb|EFC68719.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 317 str.
F0108]
Length = 206
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ + + ++ LE+L L+ W+++IN+VS +++ ++ HV SL + + +
Sbjct: 2 DEIRKYFTELTATQLEQLTQLGELYRTWNERINVVSRKDIDNLYLHHVLHSLAIAKYVQF 61
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D G+GGGFPGI +I L++ K + + + T A + A
Sbjct: 62 KAGTRVLDFGTGGGFPGIPLAIVFPECRFKLIDRTAKKIRVTQEIAAAIGLTNATAEQKA 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
+ D + +RA+ L L++
Sbjct: 122 GEEEW-----GEYDFVVSRAVMPLPDLMKI 146
>gi|300934356|ref|ZP_07149612.1| 16S rRNA methyltransferase GidB [Corynebacterium resistens DSM
45100]
Length = 219
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + + L+ V W RHV +S + + P +D+GSG G PGI
Sbjct: 30 EAYARSLASDGIERGLIGPREVPRIWERHVLNSAALEEAIPRDVRVVDVGSGAGLPGIPL 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I + L+E ++ +L +V++ V R ++ + + DV+++
Sbjct: 90 AIARPDLNVQ---LLEPLLRRTVYLDEIVRELGLNCSVHRGRAEDPNVVKELGGADVVTS 146
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A L L +S P +
Sbjct: 147 RAVAPLGKLTTWSLPLVR 164
>gi|54298882|ref|YP_125251.1| 16S rRNA methyltransferase GidB [Legionella pneumophila str. Paris]
gi|81601621|sp|Q5X0Z7|RSMG_LEGPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53752667|emb|CAH14102.1| hypothetical protein lpp2949 [Legionella pneumophila str. Paris]
Length = 208
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNH-IIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S KK SFL V ++ + E D + +RA + L+ ++
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQGFDTVISRAFSSLEQMI 151
Query: 158 EYSFPWLYQ 166
+++ + Q
Sbjct: 152 KWTEHLVAQ 160
>gi|227496611|ref|ZP_03926889.1| cell division methyltransferase [Actinomyces urogenitalis DSM
15434]
gi|226833891|gb|EEH66274.1| cell division methyltransferase [Actinomyces urogenitalis DSM
15434]
Length = 233
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 22 SRETLEKL-------EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
S+E E E+F + + + LV + W RH+ +S V P
Sbjct: 33 SQEMRELFGVAFSAAEHFADMLVAEGELRGLVGPRELPRLWSRHIVNSTAVVPFLPRRGS 92
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D+GSG GFPGI+ ++ +E V LI++ ++ +L VV +
Sbjct: 93 VADVGSGAGFPGIVVALMRPDLE---VTLIDTMERRVEWLELVVAELDLDNVTIR--RAR 147
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A ++ D ++ARA+A+L L+ + L
Sbjct: 148 AEEIKDRYDAVTARAVANLSKLVRLTSGLLRP 179
>gi|184201998|ref|YP_001856205.1| 16S rRNA methyltransferase GidB [Kocuria rhizophila DC2201]
gi|183582228|dbj|BAG30699.1| methyltransferase GidB [Kocuria rhizophila DC2201]
Length = 253
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E LE + + L+ W RHV + V +L + +D+GSG G
Sbjct: 61 ERLELAQRYTEHLASSGIVRGLIGPREAPRLWERHVLNCAVVQELIAPDARVVDVGSGAG 120
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PG+ +I + + L+E ++ +L VV V R ++A + +
Sbjct: 121 LPGLCLAIARPDL---HLTLVEPLERRVVWLDEVVADLGLDNVTVLRARAEQAKKDVGPV 177
Query: 143 DVISARALADLDTLLEYSFPWLY 165
DV++ARA++ L L++ + P L
Sbjct: 178 DVVTARAVSALVGLVDITLPLLK 200
>gi|326383903|ref|ZP_08205587.1| 16S rRNA methyltransferase GidB [Gordonia neofelifaecis NRRL
B-59395]
gi|326197362|gb|EGD54552.1| 16S rRNA methyltransferase GidB [Gordonia neofelifaecis NRRL
B-59395]
Length = 236
Score = 84.7 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + + ++ L+ + W RH+ + + ++ ID+GSG G PGI
Sbjct: 32 ERYADILVQQGVLRGLIGPRELPQLWTRHLLNCAVLSEVIDDSETVIDIGSGAGLPGIPL 91
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP--QMITTCDVIS 146
++ +E + LIE ++ +FL VV+ V R +E + + DV++
Sbjct: 92 AVARPDLE---ITLIEPLLRRTTFLDEVVEGLHLGNVTVIRGRAEEKAVLKQVRPADVVT 148
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L+ L +S P +
Sbjct: 149 SRAVAPLERLARWSAPLIR 167
>gi|269791772|ref|YP_003316676.1| methyltransferase GidB [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099407|gb|ACZ18394.1| methyltransferase GidB [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 229
Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L ++++ +E L + L + K+ L ++ ED W +H+ D + L P +
Sbjct: 5 LAMSFHLVKENEGNLRRYGALLASGNSKVRLTGTAGEEDLWEQHIVDCGALVSLLPRGAR 64
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
ID+G+GGG PG++ ++ S + L++ + K + ++ R +V R +E
Sbjct: 65 VIDVGTGGGLPGMVWALCRSDVGVTLLDSVGKKCAAVEEMARMMGLEPHRVQVVCSRSEE 124
Query: 135 APQM-ITTCDVISARALADLDTLLEYSFPWLY 165
++ DV ARAL++ L E P +
Sbjct: 125 FARLNREVYDVACARALSEAPVLAELLSPLVA 156
>gi|312888273|ref|ZP_07747849.1| 16S rRNA m(7)G-527 methyltransferase [Mucilaginibacter paludis DSM
18603]
gi|311299107|gb|EFQ76200.1| 16S rRNA m(7)G-527 methyltransferase [Mucilaginibacter paludis DSM
18603]
Length = 208
Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 12/161 (7%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
+ ++ + + ++ + L++ W+ +IN++S ++ + RHV +
Sbjct: 1 MTSDIITKYFPALTHLQQSQYARLLDLYIHWNNQINVISRKDIDLLFERHVLHSLGIAKV 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+G+GGGFPGI +I E L++S KK + V +
Sbjct: 61 MPFLPGEQVLDVGTGGGFPGIPLAIMFPETEFH---LVDSIGKKIKVVTEVAAALGLQN- 116
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A ++ D + +RA+ L +PW+ K
Sbjct: 117 -VKASHNRAEEIPGKFDFVVSRAVTQLKDF----YPWVKDK 152
>gi|257468581|ref|ZP_05632675.1| glucose inhibited division protein B [Fusobacterium ulcerans ATCC
49185]
gi|317062838|ref|ZP_07927323.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
ulcerans ATCC 49185]
gi|313688514|gb|EFS25349.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
ulcerans ATCC 49185]
Length = 233
Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 1/161 (0%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + ++ L + L +++ NL + + +H DSL +
Sbjct: 1 MREFLLEGIKKLNIEYTDKKVDNLIKYLELLTEYNSHTNLTALRDEKSIIEKHFLDSLLL 60
Query: 66 FQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ID+G+G GFPG++ +I IE L++ I K K ++ ++
Sbjct: 61 QNLIKRESKKAIDIGTGAGFPGMVLAIFNPDIEFTLMDSIGKKTKFLELVKENLRLDNVN 120
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
T D+ R ++ L T+LEY P+L
Sbjct: 121 VVTSRAEDYITDGNRQTYDLGLCRGVSKLSTILEYIIPFLK 161
>gi|87198161|ref|YP_495418.1| methyltransferase GidB [Novosphingobium aromaticivorans DSM 12444]
gi|123491126|sp|Q2GC39|RSMG_NOVAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|87133842|gb|ABD24584.1| 16S rRNA m(7)G-527 methyltransferase [Novosphingobium
aromaticivorans DSM 12444]
Length = 230
Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 9/154 (5%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+L +V ++ +L + L L +++ NLV+ T+ W+RH+ DS ++ + S
Sbjct: 12 WLREVLHVDDASMSRLAHLVDLLLAENERQNLVARGTLPHVWVRHIVDSAQLLHVSRETS 71
Query: 74 ---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
W+DLG+G GFPG++ + S V L++S+ + +L+ +V
Sbjct: 72 GSGEWLDLGTGAGFPGLVIAAIQSDRP---VTLVDSRRLRTEWLQRAADALELSNVRVIL 128
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ ISARA A LD LL S +
Sbjct: 129 SRVEDLES--GAYAAISARAFAPLDKLLAISARF 160
>gi|197294687|ref|YP_001799228.1| 16S rRNA methyltransferase GidB [Candidatus Phytoplasma
australiense]
gi|226725361|sp|B1VAK6|RSMG_PHYAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171854014|emb|CAM11979.1| Glucose-inhibited division protein B [Candidatus Phytoplasma
australiense]
Length = 208
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
+L + L + ++ L++ + +Y + +KK NL + ++ D + +H D L+
Sbjct: 1 MLYPDLLTKKFKLNPHQLQQFDLYYRFLNQENKKYNLTALISLSDVYCKHFYDSLILKEI 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
D+GSG GFP I +++ + ++ES KK +FL+ + +
Sbjct: 61 LDFNQIQNVCDVGSGAGFPSFPLKIIYPNLK---ITIVESSLKKINFLKQLTVVLGLKN- 116
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q A + + D + RAL LD +L++ + +
Sbjct: 117 -ICFVHQRAEKHTLSYDCVLVRALGRLDLILKWCRLLIKK 155
>gi|307152663|ref|YP_003888047.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
gi|306982891|gb|ADN14772.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
Length = 243
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 10/151 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWIDL 78
+ + K + Y L ++++NL E+FW +H+ DSL ID+
Sbjct: 23 NEQQQAKFQRLYTEILLANRQLNLTRIIEPEEFWEKHLWDSLSGVVHLGLKTDNLSVIDI 82
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA--- 135
G+G GFPG+ +I V L++S KK FL +V E
Sbjct: 83 GTGAGFPGVPVAIAFPGW---TVTLLDSVQKKMVFLNSLVSAMELENTSLLTERVEMIAQ 139
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ RA+A EY+ P L
Sbjct: 140 DKKYRESYDISLIRAVASASICAEYALPLLK 170
>gi|29427800|sp|Q8FSV1|RSMG_COREF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 232
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L+K ++ + + W RH+ + + + D+GSG G
Sbjct: 36 DNLDKAIAYHESLATDGSVRGFIGPREIPRLWDRHILNCGVIGEAMEEGISVADVGSGAG 95
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMIT 140
PGI +I ++ + LIE K++ +L V+++ V R +E + +
Sbjct: 96 LPGIPLAIARPDLK---IILIEPLLKRSVYLGEVIEQLGLDNVSVIRGRAEEKAVRKQVG 152
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
DV+++RA+A L L +S P
Sbjct: 153 HVDVVTSRAVAPLGRLASWSLPLAK 177
>gi|25029499|ref|NP_739553.1| glucose-inhibited division protein B [Corynebacterium efficiens
YS-314]
gi|259508319|ref|ZP_05751219.1| 16S rRNA methyltransferase GidB [Corynebacterium efficiens YS-314]
gi|23494788|dbj|BAC19753.1| putative glucose inhibited division protein B [Corynebacterium
efficiens YS-314]
gi|259164137|gb|EEW48691.1| 16S rRNA methyltransferase GidB [Corynebacterium efficiens YS-314]
Length = 209
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L+K ++ + + W RH+ + + + D+GSG G
Sbjct: 13 DNLDKAIAYHESLATDGSVRGFIGPREIPRLWDRHILNCGVIGEAMEEGISVADVGSGAG 72
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMIT 140
PGI +I ++ + LIE K++ +L V+++ V R +E + +
Sbjct: 73 LPGIPLAIARPDLK---IILIEPLLKRSVYLGEVIEQLGLDNVSVIRGRAEEKAVRKQVG 129
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
DV+++RA+A L L +S P
Sbjct: 130 HVDVVTSRAVAPLGRLASWSLPLAK 154
>gi|307611763|emb|CBX01471.1| hypothetical protein LPW_31591 [Legionella pneumophila 130b]
Length = 208
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNH-IIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S KK SFL V ++ + E D + +RA + L+ ++
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQGFDTVISRAFSSLEQMI 151
Query: 158 EYSFPWLYQ 166
+++ + Q
Sbjct: 152 KWTQHLVAQ 160
>gi|83649684|ref|YP_438119.1| methyltransferase GidB [Hahella chejuensis KCTC 2396]
gi|123529921|sp|Q2S6N0|RSMG_HAHCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83637727|gb|ABC33694.1| methyltransferase GidB [Hahella chejuensis KCTC 2396]
Length = 217
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 4/157 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L + ++ K+ + L KW+K NL + RH+ DSL
Sbjct: 9 EQLTSGLKAMGVKLAEVQQAKILRYLELLHKWNKAYNLTAVRDPVLHVSRHILDSLAA-L 67
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ ++D+G+G G PGI SI L L++S KK F+
Sbjct: 68 PYLKGVQFLDVGAGAGLPGIPLSIALPESHW---TLLDSNGKKTRFMDQCRMDMGLPNLR 124
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
EA D I +RA A + ++ +
Sbjct: 125 VEHTRIEAFSPDVKFDGIISRAFATIGDMIAGCRDLI 161
>gi|297567554|ref|YP_003686526.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
gi|296852003|gb|ADH65018.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
Length = 244
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLG 79
S + LE+L Y L L+ + + NL + + F ++H+ DSL ID+G
Sbjct: 24 SSQQLEQLSRLYDLLLEANTRTNLTAITDERGFVLKHLVDSLTCELSQLLEGQQRVIDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA--- 135
+G GFPG+ I +++ L+E+ KK +L Q + R +E
Sbjct: 84 TGAGFPGLPLKIVKPALDM---TLLEATRKKVEYLDQASQALGLKNIRTLWGRAEEQAHR 140
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
P++ D RA+ T+ E P++
Sbjct: 141 PELREVFDRALVRAVGTTATVAELCLPFVR 170
>gi|319949437|ref|ZP_08023498.1| 16S rRNA methyltransferase GidB [Dietzia cinnamea P4]
gi|319436899|gb|EFV91958.1| 16S rRNA methyltransferase GidB [Dietzia cinnamea P4]
Length = 239
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + + L+ W RHV +S +D+GSG G
Sbjct: 28 ERLPLAIRYVEFLGTAGLERGLMGPRERPRLWDRHVLNSAAAASALEDGEAVVDIGSGAG 87
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI ++ + V L+E ++ +FL ++ + +V R +E
Sbjct: 88 LPGIPLALARPDLR---VTLVEPLLRRVTFLEEIIDELGIDVRVVRGRAEEKAVIATAGN 144
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
DV+++RA+A L L +S P L
Sbjct: 145 ADVVTSRAVAPLAKLAGWSAPLLR 168
>gi|289450644|ref|YP_003475557.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185191|gb|ADC91616.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 263
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------------L 68
++ E +KL+ + +K ++ +NL + + D ++H DSL +
Sbjct: 35 LNPEAKDKLKKYGIELIKTNRMMNLTALTEPIDVAVKHFADSLTLLPLLKNEFSKFASAH 94
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
WID+G+G GFPG+ G ++L++S K+ +FL + + +
Sbjct: 95 AADQYRWIDVGTGAGFPGLPVQALA---SIGELSLLDSLKKRLAFLNDLAGILSVDNVRY 151
Query: 128 FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++A + + ARA+A L L E P + Q
Sbjct: 152 IHARAEDAGRDKKYREHYSLAVARAVAPLPILCELCLPLVKQ 193
>gi|294055675|ref|YP_003549333.1| methyltransferase GidB [Coraliomargarita akajimensis DSM 45221]
gi|293615008|gb|ADE55163.1| methyltransferase GidB [Coraliomargarita akajimensis DSM 45221]
Length = 217
Score = 84.4 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYPSIWID 77
NV T L + L +W++KINL+S +E RH+ + + +D
Sbjct: 10 NVDDGTWTLLAEWATLLREWNEKINLISRKDIEHLEERHLAHCLVITNHLRLMNGARIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGGFPG+I +I + L++S KK + + ++ R E
Sbjct: 70 VGTGGGFPGLIMAICYPQAQ---FTLVDSIGKKIGVVADIAERLGLRNVEARQCRAE--S 124
Query: 138 MITTCDVISARALADLDTLLEY 159
+ D I+ RA+ +L +
Sbjct: 125 IRKEFDFITGRAVKNLPEYFSW 146
>gi|325278905|ref|YP_004251447.1| Ribosomal RNA small subunit methyltransferase G [Odoribacter
splanchnicus DSM 20712]
gi|324310714|gb|ADY31267.1| Ribosomal RNA small subunit methyltransferase G [Odoribacter
splanchnicus DSM 20712]
Length = 209
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLH 69
N + + + ++ E E+ L+ +W++KIN++S +++FW+ HV SL +
Sbjct: 5 NLIYDYFPELTEEQRERFARLEGLYREWNEKINVISRKDMDEFWVHHVLHSLAIAKIIRF 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPGI +I + LI+S KK + + +
Sbjct: 65 APGTRVMDVGTGGGFPGIPLAILFPEVNFY---LIDSIGKKIKVVEGIRDALGL--QHVR 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA+ ++ + +
Sbjct: 120 TEQIRVENVAEQQDFIVSRAVTAFPAFVKLIRGKIRK 156
>gi|237786650|ref|YP_002907355.1| glucose-inhibited division protein B [Corynebacterium
kroppenstedtii DSM 44385]
gi|237759562|gb|ACR18812.1| glucose-inhibited division protein B [Corynebacterium
kroppenstedtii DSM 44385]
Length = 253
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
++ + L+ W RH+ + + +L S +D+GSG G PGI +
Sbjct: 65 AYHESLRSDATVRGLIGPREAPRLWERHILNCAVIGELMDRDSRVVDIGSGAGLPGIPLA 124
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVISA 147
I ++ + LIE + ++ ++L +V K V R +E + D +++
Sbjct: 125 IARPDLD---ITLIEPQLRRVNYLEEIVGKLGLDNVSVVRGRAEEKTIKRQNRGADYVTS 181
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L L+ +S P Q
Sbjct: 182 RAVAPLGKLMGWSLPLTRQ 200
>gi|87125379|ref|ZP_01081225.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9917]
gi|86167148|gb|EAQ68409.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9917]
Length = 250
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 12/151 (7%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPSIWIDLGS 80
LE+ W++++NL DFW+ V DSL Q P ID+G+
Sbjct: 26 QLEQFVTLQEELRSWNQRVNLTRLVEGADFWVAQVLDSLWPLLNELQAPQTPLRCIDVGT 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQM 138
GGGFPG+ +I L + L++S +K + + + R +V RI+ Q
Sbjct: 86 GGGFPGLAVAIALPGAR---LTLVDSVGRKTAAVMAMADSLGLADRVQVRTERIERTGQD 142
Query: 139 ---ITTCDVISARALADLDTLLEYSFPWLYQ 166
D ARA+A + EY P L +
Sbjct: 143 PACRGRFDRAMARAVASAPVVAEYLVPLLQK 173
>gi|54295715|ref|YP_128130.1| hypothetical protein lpl2803 [Legionella pneumophila str. Lens]
gi|81601155|sp|Q5WSS3|RSMG_LEGPL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53755547|emb|CAH17046.1| hypothetical protein lpl2803 [Legionella pneumophila str. Lens]
Length = 208
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNH-IIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S KK SFL V ++ + E D + +RA + L+ ++
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQGFDTVISRAFSSLEQMI 151
Query: 158 EYSFPWLYQ 166
+++ + Q
Sbjct: 152 KWTQHLVAQ 160
>gi|149199436|ref|ZP_01876472.1| glucose-inhibited division protein B [Lentisphaera araneosa
HTCC2155]
gi|149137514|gb|EDM25931.1| glucose-inhibited division protein B [Lentisphaera araneosa
HTCC2155]
Length = 223
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 11/158 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PS 73
+ +K E Y + K ++ NL ++ EDF IRH+ DS+ +P
Sbjct: 15 KIQLPEGFSQKAEEIYQVVTKINETHNLTRITSPEDFKIRHLIDSICSVAYYPELATESL 74
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+DLG GGGFP I S ++ + ++S+ K + + K R
Sbjct: 75 KILDLGCGGGFPCIPLSAYNPQLD---ITGLDSEGTKVKCVAQAASELGLSNLKTIHARG 131
Query: 133 QE---APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+E + D+++ARA+A D L++ +L K
Sbjct: 132 RELAIKEEHKAQYDIVTARAVATADKLIKECRQFLKPK 169
>gi|312128797|ref|YP_003993671.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
gi|311778816|gb|ADQ08302.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
Length = 238
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 68/167 (40%), Gaps = 10/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ +L + N V + L + L L+ ++ NL + E+F I+H+ DSL
Sbjct: 3 LLDRVLEYYKVKNPLVV----KQLLIKYMNLVLEKNRLFNLTAIENEEEFVIKHIADSLS 58
Query: 65 -----VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ + ID+GSG G PG+ I + S+ L + + K K + +
Sbjct: 59 LLKFIEEENTNQNPVAIDIGSGFGAPGLFVKIAMPSLNIFLNDSNKKKCKFMVDAKESLG 118
Query: 120 KTAARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ A + + D + ARA+ L+ L EY+ P L
Sbjct: 119 ISGVNVVCERAEVLGRKEEFREKFDFVFARAVDRLNVLCEYALPLLK 165
>gi|189040870|sp|Q0SAH7|RSMG_RHOSR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 227
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E +Y + L+ V W RH+ + V +L +D+GSG G PGI
Sbjct: 32 ERYYKSLASDGVERGLIGPREVPRLWERHLLNCAVVGELIAEGESVVDVGSGAGLPGIPL 91
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I + + L+E +++ +L V+ V R +E + DV+++
Sbjct: 92 AIARPDLR---ITLVEPLLRRSVYLAEFVESNGLDVLVVRGRAEESGVVKEAGGADVVTS 148
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L+ L ++S P +++
Sbjct: 149 RAVAPLEKLAKWSLPLIHE 167
>gi|111020645|ref|YP_703617.1| glucose-inhibited division protein B [Rhodococcus jostii RHA1]
gi|110820175|gb|ABG95459.1| methyltransferase protein GidB (glucose inhibited division protein
B) [Rhodococcus jostii RHA1]
Length = 205
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E +Y + L+ V W RH+ + V +L +D+GSG G PGI
Sbjct: 10 ERYYKSLASDGVERGLIGPREVPRLWERHLLNCAVVGELIAEGESVVDVGSGAGLPGIPL 69
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I + + L+E +++ +L V+ V R +E + DV+++
Sbjct: 70 AIARPDLR---ITLVEPLLRRSVYLAEFVESNGLDVLVVRGRAEESGVVKEAGGADVVTS 126
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L+ L ++S P +++
Sbjct: 127 RAVAPLEKLAKWSLPLIHE 145
>gi|88807344|ref|ZP_01122856.1| putative glucose inhibited division protein B [Synechococcus sp. WH
7805]
gi|88788558|gb|EAR19713.1| putative glucose inhibited division protein B [Synechococcus sp. WH
7805]
Length = 254
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPSIWIDLGS 80
E+L L W+ ++NL EDFWI V DSL P ID+G+
Sbjct: 26 QREQLITLQQLLRDWNSRVNLTRLIEGEDFWIAQVLDSLWPLKAELDTANKPRRCIDVGT 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQM 138
GGGFPG+ +I L E V L++S +K + + + + R V R++ Q
Sbjct: 86 GGGFPGLAVAIALPGAE---VTLVDSVGRKTAAVAAMARSLGMAERVSVRTERVERTGQD 142
Query: 139 ---ITTCDVISARALADLDTLLEYSFPWLY 165
D+ ARA+A + EY P L+
Sbjct: 143 PTCRGRFDLAMARAVASAPVVAEYLVPLLH 172
>gi|17230674|ref|NP_487222.1| 16S rRNA methyltransferase GidB [Nostoc sp. PCC 7120]
gi|20177889|sp|Q8YSA7|RSMG_ANASP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|17132277|dbj|BAB74881.1| glucose inhibited division protein B [Nostoc sp. PCC 7120]
Length = 245
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 14/155 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-------I 74
+ + + Y L L+ ++++NL + ++FW +H+ DSLR
Sbjct: 21 TDSQQARFQQLYELILEGNRQLNLTRITEPQEFWEKHLWDSLRGVAPQQQLISSLQLGAS 80
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFAC 130
ID+G+G GFPG+ +I + L++S KK +F+ ++ + A A
Sbjct: 81 VIDIGTGAGFPGVPVAIIA---SNSTITLVDSTRKKITFIDTILSELALTNAKTLVSRAE 137
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
I + PQ DV RA+ EY+ P L
Sbjct: 138 EIGQQPQHREQYDVALIRAVGTASPCAEYTLPLLK 172
>gi|296271538|ref|YP_003654170.1| methyltransferase GidB [Thermobispora bispora DSM 43833]
gi|296094325|gb|ADG90277.1| methyltransferase GidB [Thermobispora bispora DSM 43833]
Length = 226
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +++ + L + L+ V W RH+ + V + P + +D+GSG G
Sbjct: 21 EAMDRARVYAELLAGPGVERGLLGPREVPRIWDRHMLNCGVVAEEVPENTTLVDIGSGAG 80
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PG++ +I + V L+E ++ FL + + +V R +E
Sbjct: 81 LPGVVLAIIRPDVR---VTLLEPLLRRTVFLSEITEILKLDNVEVLRGRAEELAYKRV-F 136
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
DV +ARA+A LD L+ +S P L +
Sbjct: 137 DVATARAVAPLDRLVAWSLPLLRE 160
>gi|113869583|ref|YP_728072.1| 16S rRNA methyltransferase GidB [Ralstonia eutropha H16]
gi|123032570|sp|Q0K5L7|RSMG_RALEH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113528359|emb|CAJ94704.1| S-Adenosylmethionine-dependent methyltransferase involved in
bacterial cell division [Ralstonia eutropha H16]
Length = 233
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 14/160 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++ ++ L + L KW+ NL + ++ H+ DSL +
Sbjct: 19 GLALAPAQIDTLFAYLALLRKWNGVYNLTAIRHPDEMLTHHMLDSLAAVPALAEAARAAE 78
Query: 76 ---------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSGGG PG+ +I + +V++++ K +FL +
Sbjct: 79 VGTPARGRVLDVGSGGGMPGLPLAIACPDVSVLMVDIVQK---KTAFLTQCRAQLGLSNA 135
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + VI++RA A+L + S L
Sbjct: 136 AAHWGPVEKLDDASGFAVITSRAFAELTDFVNLSGQLLAP 175
>gi|313159131|gb|EFR58506.1| 16S rRNA methyltransferase GidB [Alistipes sp. HGB5]
Length = 207
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+L + ++ ++ Y L+ W+ KIN+VS + ++RHV SL + ++ +
Sbjct: 2 ELILKYFPELTDCQRQRFAALYDLYADWNAKINVVSRKDFDQLYLRHVLHSLAIAKVCAF 61
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G GGGFP + +I ++S KK + + V R
Sbjct: 62 DAGARILDVGCGGGFPSVPLAILFPEAR---FTAVDSIRKKIAVVEGVTAGLGLRNLEPR 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
C E + D + +RA+ + + +
Sbjct: 119 CARAET--LPERYDYVVSRAVTAMSEFVNW 146
>gi|282879011|ref|ZP_06287773.1| 16S rRNA methyltransferase GidB [Prevotella buccalis ATCC 35310]
gi|281298846|gb|EFA91253.1| 16S rRNA methyltransferase GidB [Prevotella buccalis ATCC 35310]
Length = 208
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 67/163 (41%), Gaps = 10/163 (6%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-- 66
+ +L + +++ E ++ L+ W+ KIN++S ++ + HV SL +
Sbjct: 1 MNIEAILKYFPSLTEEQKKQYGMLQELYSDWNAKINVISRKDIDHLYEHHVLHSLSIAKL 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ +DLG+GGGFPGI +I LI+ KK +
Sbjct: 61 IGFIDETKVLDLGTGGGFPGIPLAIMFPK---CSFTLIDGTGKKVRVAEEIAHSIGLKNV 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R +E + D + +RA L L++ + + +++
Sbjct: 118 TTKHIRGEEEKGL---YDFVVSRAAMSLPDLVKIAKKNISKEQ 157
>gi|255994563|ref|ZP_05427698.1| 16S rRNA methyltransferase GidB [Eubacterium saphenum ATCC 49989]
gi|255993276|gb|EEU03365.1| 16S rRNA methyltransferase GidB [Eubacterium saphenum ATCC 49989]
Length = 239
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGGGFPGI 87
L + LK ++KINL + E+ ++H+ DSL V + I DLG+GGGFPG+
Sbjct: 28 LANYLLELLKINEKINLTAVRDPEEAAVKHIVDSLVVEKAFGIEDRRILDLGTGGGFPGV 87
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITTCD 143
++ G V L++SK KK + + VV F A + ++ + D
Sbjct: 88 PLAVAC---GGREVVLLDSKKKKLNVIEAVVDNLGIDNVSFLPQRAEEASKEERLRESFD 144
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
V ARA+A+L LLE + P + K
Sbjct: 145 VCVARAVAELRVLLEIAVPLVKLK 168
>gi|322379936|ref|ZP_08054213.1| glucose-inhibited division protein B [Helicobacter suis HS5]
gi|321147634|gb|EFX42257.1| glucose-inhibited division protein B [Helicobacter suis HS5]
Length = 179
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ F L L+W+ NL + ++ED H+ DS++V + +D+GSG GFP +
Sbjct: 5 LQRFATLLLEWNCIHNLSGAKSLEDI-EAHINDSIQVLDFIKHFDTCLDIGSGAGFPALP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM-ITTCDVISA 147
S+ LV K+ ++ + + K RIQ + I D+I++
Sbjct: 64 LSVFCPHARFILVEPNIKKSAFLYHVKNTLALDNLQIK--RARIQTLNPLEIEKMDLITS 121
Query: 148 RALADLDTLLEYSFPWLY 165
RAL LL P+L
Sbjct: 122 RALMPTQDLLALGMPFLK 139
>gi|256398141|ref|YP_003119705.1| 16S rRNA methyltransferase GidB [Catenulispora acidiphila DSM
44928]
gi|256364367|gb|ACU77864.1| methyltransferase GidB [Catenulispora acidiphila DSM 44928]
Length = 245
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + L+ V W RH+ + V L P D+GSG G PGI+ +
Sbjct: 40 RYAEILAGPGVTRGLLGPREVPRLWERHILNCAVVGGLLPADIQICDVGSGAGLPGIVLA 99
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ + V L+E ++ FL V+ +V R +E DV+++RA
Sbjct: 100 LARPDL---SVTLLEPLLRRTLFLDEVIDLLGLENVRVLRGRAEEFAG-KERFDVVTSRA 155
Query: 150 LADLDTLLEYSFPWLY 165
+A LD L +S P L
Sbjct: 156 VAPLDRLAGWSLPLLR 171
>gi|194291176|ref|YP_002007083.1| 16S rRNA methyltransferase gidb [Cupriavidus taiwanensis LMG 19424]
gi|193225011|emb|CAQ71022.1| glucose-inhibited division protein, contains
S-adenosyl-L-methionine-dependent methyltransferase
domain [Cupriavidus taiwanensis LMG 19424]
Length = 242
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 14/160 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---- 73
++ ++ L + L KW+ NL + ++ H+ DSL +
Sbjct: 28 GLALAPAQIDTLFAYLALLRKWNGVYNLTAIRHPDEMLTHHMLDSLAAVPALAQAARAVE 87
Query: 74 -------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSGGG PG+ +I + +V++++ K +FL +
Sbjct: 88 VAAPARGRVLDVGSGGGMPGLPLAIACPDVSVLMVDIVQK---KTAFLTQCRAQLGLSNA 144
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E VI++RA A+L + S L
Sbjct: 145 AAHWGPVEKLDDADGFAVITSRAFAELTDFVNLSGQLLAP 184
>gi|52843085|ref|YP_096884.1| 16S rRNA methyltransferase GidB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|81603158|sp|Q5ZRJ1|RSMG_LEGPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52630196|gb|AAU28937.1| glucose inhibited division protein B [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 208
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNH-IIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S KK FL V ++ + E D + +RA + L+ ++
Sbjct: 95 ---FVLLDSNGKKIRFLNEVKRQLNIKNIEPIQIRVENYHPNQGFDTVISRAFSSLEQMI 151
Query: 158 EYSFPWLYQ 166
+++ + Q
Sbjct: 152 KWTQHLVAQ 160
>gi|226362888|ref|YP_002780668.1| 16S rRNA methyltransferase GidB [Rhodococcus opacus B4]
gi|226241375|dbj|BAH51723.1| methyltransferase GidB [Rhodococcus opacus B4]
Length = 227
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E +Y + L+ V W RH+ + V +L +D+GSG G PGI
Sbjct: 32 ERYYKSLATDGVERGLIGPREVPRLWERHLLNCAVVGELIAEGESVVDVGSGAGLPGIPL 91
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I + + L+E +++ +L V+ V R +E + DV+++
Sbjct: 92 AIARPDLR---ITLVEPLLRRSVYLAEFVESNGLDVLVVRGRAEESGVVKEAGGADVVTS 148
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L+ L ++S P +++
Sbjct: 149 RAVAPLEKLAKWSLPLIHE 167
>gi|283782568|ref|YP_003373322.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis 409-05]
gi|283441362|gb|ADB13828.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis 409-05]
Length = 255
Score = 83.6 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------PYPSIWID 77
E LEK + F+ + L+ + W RH+ +S V D
Sbjct: 51 EALEKCKLFHVKLQQEGLIRGLIGPRDMNILWERHILNSAAVVPFIKEAIVGRKNKRVAD 110
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGGFPG++ + L + V LIE ++ +LR V +F R E
Sbjct: 111 VGSGGGFPGLVLAACLPDYD---VTLIEPMERRVDWLRECVALMKLKNVTIFHGRSDEVI 167
Query: 137 QMITT-----CDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ RA+A + L ++ P L +
Sbjct: 168 DKVKSHEIPAFDVVTCRAVAPMTKLAGWTIPLLNK 202
>gi|315635267|ref|ZP_07890544.1| glucose inhibited division protein B [Aggregatibacter segnis ATCC
33393]
gi|315476013|gb|EFU66768.1| glucose inhibited division protein B [Aggregatibacter segnis ATCC
33393]
Length = 209
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S ++ ++H+ DS+ V + + +ID+G+G G PG+ +I +
Sbjct: 40 KWNKAYNLTSVRDPQEMLVKHILDSI-VVSPYLQGNRFIDVGTGPGLPGLPLAIVNPQKQ 98
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S K+ SF+R +++ E D + +RA A L +
Sbjct: 99 ---FVLLDSLGKRISFIRNAIRELGLTNVEPVLSRVEDYHPDHQFDGVLSRAFASLKDMT 155
Query: 158 EYSFPW 163
E+
Sbjct: 156 EWCHHL 161
>gi|332300024|ref|YP_004441945.1| Ribosomal RNA small subunit methyltransferase G [Porphyromonas
asaccharolytica DSM 20707]
gi|332177087|gb|AEE12777.1| Ribosomal RNA small subunit methyltransferase G [Porphyromonas
asaccharolytica DSM 20707]
Length = 224
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S ++L Y L+ +W+ +IN++S +++ ++ HV SL + P D
Sbjct: 23 LSPTAQQQLTALYPLYKEWNARINVISRRDIDNLYLHHVMHSLALAWLLPDEPTSYTIAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G GGGFP I +I + L++ I K A + + T R++
Sbjct: 83 VGCGGGFPSIPLAILYPQYQFLLIDSIAKKLHVAQAIADEIGLT--NVSTHHTRVESCE- 139
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
CD I +RA L L EY+ L+
Sbjct: 140 --LRCDYIVSRAAMPLGLLYEYTQHMLH 165
>gi|300770006|ref|ZP_07079885.1| 16S rRNA methyltransferase GidB [Sphingobacterium spiritivorum ATCC
33861]
gi|300762482|gb|EFK59299.1| 16S rRNA methyltransferase GidB [Sphingobacterium spiritivorum ATCC
33861]
Length = 211
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 13/159 (8%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVFQL 68
+ + + ++ + L+ W+ +IN++S +E ++ HV +
Sbjct: 6 DIIYKYFPKLTETQKNQFAQLAELYPFWNNQINVISRKDIESLYLHHVLHSLGIAKFMTE 65
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +D+G+GGGFPGI +I ++ L++S KK +R V
Sbjct: 66 FAPGTHILDVGTGGGFPGIPLAILFPEVKFH---LVDSIGKKIKVVREVATALGLTN--V 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q+ D + +RA+ L PW+ K
Sbjct: 121 EADHMRAEQLDYKYDFVVSRAVTRLGDF----TPWIRNK 155
>gi|227538457|ref|ZP_03968506.1| glucose-inhibited cell division protein [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241643|gb|EEI91658.1| glucose-inhibited cell division protein [Sphingobacterium
spiritivorum ATCC 33300]
Length = 211
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 13/159 (8%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVFQL 68
+ + + ++ + L+ W+ +IN++S +E ++ HV +
Sbjct: 6 DIIYKYFPKLTETQKNQFAQLAELYPFWNNQINVISRKDIESLYLHHVLHSLGIAKFMTE 65
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +D+G+GGGFPGI +I ++ L++S KK +R V
Sbjct: 66 ITAGTHILDVGTGGGFPGIPLAILFPEVKFH---LVDSIGKKIKVVREVATALGLTN--V 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q+ D + +RA+ L PW+ K
Sbjct: 121 EADHMRAEQLDYKYDFVVSRAVTRLGDFA----PWIRNK 155
>gi|218437873|ref|YP_002376202.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
gi|218170601|gb|ACK69334.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
Length = 243
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 4/148 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWIDL 78
+ E K + Y L ++++NL + +FW +H+ DSL ID+
Sbjct: 23 TPEQQVKFQRLYEEILLGNRQLNLTRITESSEFWEKHLWDSLSGIIPLGLRDQELSVIDI 82
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G GFPG+ +I + L++ ++ K L ++ + I +
Sbjct: 83 GTGAGFPGLPVAISYPNWRVTLLDSVQKKLLFLKSLLPKLEIKNTTVLIGRVEAIAQDKT 142
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
T D+ RA+A EY P L
Sbjct: 143 YRETFDLALIRAVASASVCAEYGLPLLK 170
>gi|122879365|ref|YP_203195.6| 16S rRNA methyltransferase GidB [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188579176|ref|YP_001916105.1| 16S rRNA methyltransferase GidB [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|189040869|sp|Q5GU13|RSMG_XANOR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238689462|sp|B2SU21|RSMG_XANOP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188523628|gb|ACD61573.1| methyltransferase GidB [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 212
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + RH+ DSL + + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPRAMVTRHLLDSLAMQPYIASGML-ADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ R A EA T D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDEPTAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|58428773|gb|AAW77810.1| glucose inhibited division protein B [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 276
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + RH+ DSL + + DLG+G G PGI
Sbjct: 95 LLRYLALLVRWNKTYNLTAVRDPRAMVTRHLLDSLAMQPYIASGML-ADLGTGPGLPGIP 153
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ R A EA T D ++AR
Sbjct: 154 LAITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDEPTAYDHLTAR 210
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 211 ALDTLAGIIAVGGHLLRP 228
>gi|146297754|ref|YP_001181525.1| methyltransferase GidB [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|189039490|sp|A4XN49|RSMG_CALS8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145411330|gb|ABP68334.1| 16S rRNA m(7)G-527 methyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 253
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
K + +L + N+ V E L F L L+ +K NL + ++F I+H+ D
Sbjct: 15 KMELLDRVLEFYSIKNSSVV----KELLLRFMKLVLEKNKHFNLTAIENEDEFVIKHIAD 70
Query: 62 SLRVFQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
SL + + +D+GSG G PGI I SI + L +S KK +F+
Sbjct: 71 SLSLIRFLQNSDGKLVRAVDIGSGFGVPGIPVKIAKPSI---SLVLNDSNKKKCNFMNEA 127
Query: 118 VQKTAARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
G +V R +E + + D ARA+ L+ L EY+ P L
Sbjct: 128 KDHLGLSGIEVVCQRAEELGKEVEFRESFDFAFARAVDKLNVLCEYALPLLK 179
>gi|113955529|ref|YP_731543.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CC9311]
gi|123327618|sp|Q0I7M9|RSMG_SYNS3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113882880|gb|ABI47838.1| methyltransferase GidB [Synechococcus sp. CC9311]
Length = 254
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPSIWID 77
+ L +L+ L W+ ++NL E+FWI V DSL + ID
Sbjct: 23 NENQLSQLKELQALLRHWNSRVNLTRLVENEEFWIAQVFDSLWPLEKELRTPDLTRRCID 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEA 135
+G+GGGFPG+ +I L + L++S +K + + + R V R++
Sbjct: 83 VGTGGGFPGLAVAIALPGT---SLTLVDSVGRKTAAVESMANALGLGTRVDVRTERVEVT 139
Query: 136 PQM---ITTCDVISARALADLDTLLEYSFPWLYQK 167
Q T D+ ARA+A + EY P L +
Sbjct: 140 GQKRSCRGTFDLAMARAVATPPVVAEYLVPLLAHQ 174
>gi|311109649|ref|YP_003982502.1| methyltransferase [Achromobacter xylosoxidans A8]
gi|310764338|gb|ADP19787.1| methyltransferase GidB [Achromobacter xylosoxidans A8]
Length = 229
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 13/150 (8%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-------YPSIWID 77
T+ KL + +W++ NL + + I+H+ DSL P+ D
Sbjct: 31 TMAKLLNYLSQMQRWNRTYNLTAIRDPQQMLIQHLFDSLAAVGPFNEALGASGTPAKVYD 90
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSGGG PG++ +I V +++ KK +F+R + A + RI+
Sbjct: 91 VGSGGGLPGVVLAIMRPHW---SVTCVDAVEKKTAFVRQMSGVLALPNLQASHARIETLT 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
C+++++RA A LD + + +
Sbjct: 148 P--AECNIVTSRAFASLDDFAQLAGRHVRN 175
>gi|110598116|ref|ZP_01386394.1| methyltransferase GidB [Chlorobium ferrooxidans DSM 13031]
gi|110340248|gb|EAT58745.1| methyltransferase GidB [Chlorobium ferrooxidans DSM 13031]
Length = 227
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYPSI 74
++ + E LEKL ++ L +W+ K+NL+S I+H+ S + +
Sbjct: 25 HSIELDTEKLEKLVHYGHLLEEWNLKVNLISRKEDSPVIIKHIFHSILISSYHSFRKEER 84
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+DLG+GGG PGI SI L+++ KK + + ++++ R++
Sbjct: 85 VLDLGTGGGLPGIPLSIAFPDTR---FLLVDATGKKITACQAMIKELGITNAIAMHTRVE 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E ++ D + +R +A L+ L Y+ L
Sbjct: 142 ELKGVV--FDTVLSRQVAPLEQLCRYAARLLKP 172
>gi|37520277|ref|NP_923654.1| 16S rRNA methyltransferase GidB [Gloeobacter violaceus PCC 7421]
gi|55976480|sp|Q7NMQ7|RSMG_GLOVI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|35211270|dbj|BAC88649.1| glucose inhibited division protein B [Gloeobacter violaceus PCC
7421]
Length = 251
Score = 83.6 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLGSGG 82
E Y L L + ++NL + E+FW +H+ DSLR ID+G+G
Sbjct: 18 QARSFERLYALVLAGNTRLNLTRITGREEFWEKHLFDSLRGLAAFQDQKEPSLIDIGTGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA---PQM 138
GFPG+ +I V L++S KK +F+ +Q + R ++ +
Sbjct: 78 GFPGLPIAIAHPDW---YVVLVDSVRKKIAFVLSTIQALGLTNAQALTGRAEDLAHRREH 134
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ RA+A + EY+ P++
Sbjct: 135 RESYDLAVLRAVAQANVCAEYALPFVK 161
>gi|227549432|ref|ZP_03979481.1| glucose-inhibited division protein B [Corynebacterium
lipophiloflavum DSM 44291]
gi|227078509|gb|EEI16472.1| glucose-inhibited division protein B [Corynebacterium
lipophiloflavum DSM 44291]
Length = 222
Score = 83.6 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + + VE W RH+ + + + D+GSG G PGI
Sbjct: 36 QAYHESLATVAASRGFIGPKEVERLWSRHLLNCAVISEAFDEGLEVADIGSGAGLPGIPL 95
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISAR 148
+I + V LIE K++++L VV + V R +E Q DV+++R
Sbjct: 96 AIARPDL---SVTLIEPLLKRSTYLSEVVDELGLENVTVVRGRAEE--QSSALFDVVTSR 150
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L L +S P +
Sbjct: 151 AVAPLGKLAGWSLPLVKP 168
>gi|92115409|ref|YP_575337.1| methyltransferase GidB [Chromohalobacter salexigens DSM 3043]
gi|122419018|sp|Q1QSC0|RSMG_CHRSD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91798499|gb|ABE60638.1| 16S rRNA m(7)G-527 methyltransferase [Chromohalobacter salexigens
DSM 3043]
Length = 208
Score = 83.6 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ NL + E RH+ DS V P + +D+G+G G PG++ +I S+E
Sbjct: 37 KWNRAYNLTAVRDPEQMVTRHLLDSASVATAVRGPRL-LDVGAGAGLPGLVLAILDPSLE 95
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTL 156
V +++ KK F R V + R++ D I +RA A L T
Sbjct: 96 ---VTMLDGNGKKVRFQRQAVLELGLENVTPVQARVEHF--TTRDFDQIVSRAFAQLATF 150
Query: 157 LEYSFPWLYQ 166
+E + P L +
Sbjct: 151 VELTRPLLAE 160
>gi|118594207|ref|ZP_01551554.1| methyltransferase GidB [Methylophilales bacterium HTCC2181]
gi|118439985|gb|EAV46612.1| methyltransferase GidB [Methylophilales bacterium HTCC2181]
Length = 206
Score = 83.6 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
ILR + S + KL + + LKW+K NL + + I H+ DSL V
Sbjct: 5 EEILRQGIEQLGLSDSNNIVHKLLIYKDILLKWNKSFNLTAMRDEKTIIINHLLDSLSVV 64
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
QL + +D+GSG G PGI+ ++ + + LI+ KKA F++ V + +
Sbjct: 65 QLIK-ENEVLDVGSGAGLPGIVLALHDPKKQ---ITLIDKVGKKAIFMKQVCLELEIKNV 120
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
E D I ARA +++ L++ + +
Sbjct: 121 DVIHGRVEDMDHTKKFDAIVARAFSEMQMLVDLTKNIIK 159
>gi|324999876|ref|ZP_08120988.1| glucose-inhibited division protein B [Pseudonocardia sp. P1]
Length = 224
Score = 83.6 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + L+ ++ W RHV + + ++ P + +D+GSG G PGI +
Sbjct: 25 RYVEHLATSGIERGLIGPRELDRLWDRHVLNCAVLAEVVPPDAKVVDVGSGAGLPGIPLA 84
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI--TTCDVISAR 148
+ + + +IE ++ +L VV V R +E + DV++AR
Sbjct: 85 LARPDLR---IVMIEPLARRVDWLDEVVSDLGLDVAVERGRAEEPAVLRRWEGADVVTAR 141
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+ L L P L
Sbjct: 142 AVGPLARLAGLCLPLLRP 159
>gi|125554703|gb|EAZ00309.1| hypothetical protein OsI_22326 [Oryza sativa Indica Group]
Length = 210
Score = 83.6 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 43 INLVSSSTVEDFWIRHVEDS-------LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
+NL + + + RHV DS R ++ +D+GSG G PG+I ++ S
Sbjct: 1 MNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDLGGMRLVDVGSGAGLPGLILAVARPS 60
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA---PQMITTCDVISARALA 151
+ L+ES K+ FL + V+ V R + P DV ARA+A
Sbjct: 61 WK---FTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRAENVGQSPDFREAFDVAVARAVA 117
Query: 152 DLDTLLEYSFPWLY 165
+L L EY P +
Sbjct: 118 ELKVLAEYCLPLVR 131
>gi|319957648|ref|YP_004168911.1| methyltransferase gidb [Nitratifractor salsuginis DSM 16511]
gi|319420052|gb|ADV47162.1| methyltransferase GidB [Nitratifractor salsuginis DSM 16511]
Length = 199
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ LE+LE+F L L+W++ NL + + ++ DSL P +D
Sbjct: 14 GLELDERVLERLEHFTELLLEWNRVHNLTGARDRREI-EANILDSLVPLSFVSKPDSLLD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+G GFPG++ + I L ++ +ASFLR + R +V R+++
Sbjct: 73 VGTGAGFPGLVLAAAWPEIPTVLCEPLKK---RASFLRIAALEMGLERVEVARKRVEDLQ 129
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
+IS+RA+ D LLE +
Sbjct: 130 H--EPFGLISSRAVTDTGLLLELTRHL 154
>gi|293191006|ref|ZP_06609050.1| 16S rRNA methyltransferase GidB [Actinomyces odontolyticus F0309]
gi|292820693|gb|EFF79659.1| 16S rRNA methyltransferase GidB [Actinomyces odontolyticus F0309]
Length = 220
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGII 88
+ + + + L+ +E W RH+ +S V F +D+GSG G PGI+
Sbjct: 33 EYARMLEEEGEIRGLLGPRDMERIWSRHIVNSAAVLDFMPRKDGRQVLDVGSGSGLPGIV 92
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ ++ V+L E ++ +L VV+ E + DV++AR
Sbjct: 93 IAACRPELD---VHLAEPMARRVEWLMDVVEDLGLDNVTIHQARAEELRGKGKADVVTAR 149
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A++ L+ + +
Sbjct: 150 AVANMSKLVRMTSKLIAP 167
>gi|154508232|ref|ZP_02043874.1| hypothetical protein ACTODO_00726 [Actinomyces odontolyticus ATCC
17982]
gi|153797866|gb|EDN80286.1| hypothetical protein ACTODO_00726 [Actinomyces odontolyticus ATCC
17982]
Length = 220
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGII 88
+ + + + L+ +E W RH+ +S V F +D+GSG G PGI+
Sbjct: 33 EYARMLEEEGEIRGLLGPRDMERIWSRHIVNSAAVLDFMPRKDGRQVLDVGSGSGLPGIV 92
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ ++ V+L E ++ +L VV+ E + DV++AR
Sbjct: 93 IAACRPELD---VHLAEPMARRVEWLMDVVEDLGLDNVTIHQARAEELRGKGKADVVTAR 149
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A++ L+ + +
Sbjct: 150 AVANMSKLVRMTSKLIAP 167
>gi|282863325|ref|ZP_06272384.1| methyltransferase GidB [Streptomyces sp. ACTE]
gi|282561660|gb|EFB67203.1| methyltransferase GidB [Streptomyces sp. ACTE]
Length = 238
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + L K L+ V W RH+ + + + P D+GSG G
Sbjct: 20 EFFPEAVRYAELLADAGVKRGLIGPREVPRLWGRHLLNCAVLSEAVPEGVTVCDVGSGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PGI ++ ++ + L+E ++ +FL+ VV+ V R +E +
Sbjct: 80 LPGIPLALVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGSLPPV 136
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+A LD L + P L
Sbjct: 137 HVVTARAVAPLDRLAGWGVPLLRP 160
>gi|258405442|ref|YP_003198184.1| methyltransferase GidB [Desulfohalobium retbaense DSM 5692]
gi|257797669|gb|ACV68606.1| methyltransferase GidB [Desulfohalobium retbaense DSM 5692]
Length = 219
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-----VFQLHPY 71
+ Y +S E L + L +W+ +INLV + V DS P+
Sbjct: 20 SGYEISEVQAELLAVYLRLLEQWNTRINLVGPRKWPQMLSQLVADSWHLAALLQELQWPH 79
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
+DLG+G G PGI + G L+E + K+ +FL + + G +
Sbjct: 80 QCQSLDLGAGAGLPGIPLRLF---WTHGRYTLVEIRQKRVAFLHNALAQMELPGTAIHHG 136
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E P+ + ++ +RA LL + L +
Sbjct: 137 RAEELPETLLPAHLVLSRAFMPWHQLLPLAGSLLDK 172
>gi|222100852|ref|YP_002535420.1| Methyltransferase gidB [Thermotoga neapolitana DSM 4359]
gi|254766910|sp|B9KAS1|RSMG_THENN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221573242|gb|ACM24054.1| Methyltransferase gidB [Thermotoga neapolitana DSM 4359]
Length = 229
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
+EK + L + NL + +++ ++V + L + +D+GSG
Sbjct: 17 ESQIEKTFRYLNELL--NSPHNLTALRSLDSAVHKNVAEILIPLKHENLRGSLLDVGSGN 74
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMIT 140
G PG+I +I ++ V L++SK K FL +VV+K E +
Sbjct: 75 GVPGLILAIFFPELK---VTLLDSKEKAVQFLEHVVRKLNLENAAVVKERAENFSREHRE 131
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D +ARA+A L+TL+E P +
Sbjct: 132 EYDYATARAVARLNTLVEICAPAVR 156
>gi|326799925|ref|YP_004317744.1| ribosomal RNA small subunit methyltransferase G [Sphingobacterium
sp. 21]
gi|326550689|gb|ADZ79074.1| Ribosomal RNA small subunit methyltransferase G [Sphingobacterium
sp. 21]
Length = 211
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 15/161 (9%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I+ + ++ E+++ L+ W+ +IN++S ++ + RHV SL + +L
Sbjct: 8 IIYKYFK----ELTAIQKEQIDRLQDLYAFWNAQINVISRKDIDSLYERHVLHSLAIAKL 63
Query: 69 HPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +D+G+GGGFPGI +I + L++S KK ++ V
Sbjct: 64 VSFKAGATILDVGTGGGFPGIPLAILFPQTQ---FLLVDSIGKKIKVVKEVANALGLTN- 119
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q D + +RA+ L +PW+ K
Sbjct: 120 -IQTSHSRAEQTPGKFDFVISRAVTRLGEF----YPWVRNK 155
>gi|254515877|ref|ZP_05127937.1| methyltransferase GidB [gamma proteobacterium NOR5-3]
gi|219675599|gb|EED31965.1| methyltransferase GidB [gamma proteobacterium NOR5-3]
Length = 212
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W+K NL + RH+ DSL V+ ID+G+G G PGI +I L ++
Sbjct: 34 RWNKTYNLTAVRDERAMVTRHLLDSLAVYPH-LQGQRLIDVGTGAGLPGIPLAIALPNL- 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S KK FL + V + DV+ +RA A L ++
Sbjct: 92 --HFTLLDSNGKKTRFLVHAVSELGLSNVDVVKSRVSDYVPAQGFDVVLSRAFASLGDMI 149
Query: 158 EYSFPWLYQ 166
L
Sbjct: 150 SSCQHLLSP 158
>gi|78189778|ref|YP_380116.1| 16S rRNA methyltransferase GidB [Chlorobium chlorochromatii CaD3]
gi|123579260|sp|Q3APK2|RSMG_CHLCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78171977|gb|ABB29073.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium chlorochromatii
CaD3]
Length = 234
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
+ ++ E ++KL + L +W+ KINL+S I+H+ SL + Q H + +
Sbjct: 33 SLALAPEMVDKLVEYGRLLEEWNNKINLISRKEDAPIIIKHIFHSLLITQHHTFQTGEKV 92
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+DLG+GGG PGI +I L+++ KK + + ++ R++E
Sbjct: 93 LDLGTGGGLPGIPLAIIAP---QATFLLVDATGKKITACQEMIATLKLTNVTARHLRVEE 149
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
T I +R +A L+ L Y P L++K
Sbjct: 150 L--HGETFHTIVSRQVALLNKLCAYGEPLLHEK 180
>gi|325922601|ref|ZP_08184352.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas gardneri ATCC
19865]
gi|325546896|gb|EGD17999.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas gardneri ATCC
19865]
Length = 212
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + ++ DLG+G G PGI
Sbjct: 31 LLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLAMHPYIASGTL-ADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAESRAEALDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|325269872|ref|ZP_08136482.1| glucose inhibited division protein B [Prevotella multiformis DSM
16608]
gi|324987845|gb|EGC19818.1| glucose inhibited division protein B [Prevotella multiformis DSM
16608]
Length = 207
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 13/156 (8%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
I+R + +++ E++ L+ W+ KIN++S +++ + H+ SL +
Sbjct: 1 MTEIIRKYFP----HLTPRQEEQIAALDTLYHDWNAKINVISRKDIDNLYEHHILHSLAI 56
Query: 66 --FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D G+GGGFPGI +I LI+ KK R +
Sbjct: 57 AKRIRFREGTNVLDFGTGGGFPGIPLAILFPESN---FKLIDGTGKKIKVAREIADSIGL 113
Query: 124 -RGKVFACRIQEAPQMITTCDVISARALADLDTLLE 158
R +E D I +RA+ L L++
Sbjct: 114 ENVLPMHQRGEEEK---GKFDFIVSRAVMPLPELMK 146
>gi|103488332|ref|YP_617893.1| methyltransferase GidB [Sphingopyxis alaskensis RB2256]
gi|123379470|sp|Q1GP62|RSMG_SPHAL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|98978409|gb|ABF54560.1| methyltransferase GidB [Sphingopyxis alaskensis RB2256]
Length = 233
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHP 70
+L + S E ++E F + + + K NL+++ST+ W RH+ DS +
Sbjct: 28 GWLTQAFAPSTEQWAQIERFVTMLIAENAKQNLIAASTIPAIWARHIADSAQLLALDTRE 87
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+WIDLGSG G PG++ +I + + L+ES+ ++ FLR VV + A A
Sbjct: 88 GEGLWIDLGSGPGLPGLVVAI----LSERPMLLVESRRRRCDFLRAVVAELALDHVEVAE 143
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E ISARA A LD L++ S +
Sbjct: 144 APLERVATRPAA-TISARAFAPLDRLIDLSARF 175
>gi|257059962|ref|YP_003137850.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
gi|256590128|gb|ACV01015.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
Length = 240
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 6/154 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---- 73
+N + ++ + Y + +++INL + DFW +H+ DSL +
Sbjct: 14 NWNPNPSQQKQWDKLYHEIILANRQINLTRITEPNDFWEKHLWDSLAGILDIEIINLEQS 73
Query: 74 -IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACR 131
ID+G+G GFPGI I + + L + K L + + A
Sbjct: 74 LKVIDIGTGAGFPGIPIGIVCPNWQVTLFDSTRKKINFIKILLEELSLKNCHTLIGRAEE 133
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
I + + D+ RA+ + EY+ P L
Sbjct: 134 IGQNLSHRESYDLALIRAVGEASVCAEYTLPLLK 167
>gi|94496561|ref|ZP_01303137.1| glucose inhibited division protein B [Sphingomonas sp. SKA58]
gi|94423921|gb|EAT08946.1| glucose inhibited division protein B [Sphingomonas sp. SKA58]
Length = 214
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR- 64
+L + ++VSR T ++LE F + L + NL++ ST W RH+ DS +
Sbjct: 1 MTEEEAKAWLRSHFDVSRGTWDQLERFVAILLSAMDEQNLIAESTRTQIWARHIVDSAQL 60
Query: 65 -VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ W+DLG+G G PG + + + V +IE++ K+ FL V+ +
Sbjct: 61 LLLVEGAATGTWVDLGAGAGLPGAVIAC----LGKQPVLMIEARRKRVDFLNAVIAELGL 116
Query: 124 -RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
VF R++ P M VISARA A LD LL +
Sbjct: 117 QHADVFGGRVESVPAM--QAAVISARAYAPLDKLLHSALHL 155
>gi|315605514|ref|ZP_07880551.1| glucose inhibited division protein B [Actinomyces sp. oral taxon
180 str. F0310]
gi|315312781|gb|EFU60861.1| glucose inhibited division protein B [Actinomyces sp. oral taxon
180 str. F0310]
Length = 220
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGII 88
+ + + + L+ +E W RH+ +S V F +D+GSG G PGI+
Sbjct: 33 EYARMLEEEGEIRGLLGPRDMERIWSRHIVNSAAVLEFMPSKRGRQVLDVGSGSGLPGIV 92
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ ++ V+L E ++ +L VV E + DV++AR
Sbjct: 93 IAACRPDLD---VHLAEPMARRVEWLMDVVDDLGLDNVTIHQARAEELRGKGKADVVTAR 149
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A++ L+ + +
Sbjct: 150 AVANMSKLVRMTSKLIAP 167
>gi|302535579|ref|ZP_07287921.1| 16S rRNA methyltransferase GidB [Streptomyces sp. C]
gi|302444474|gb|EFL16290.1| 16S rRNA methyltransferase GidB [Streptomyces sp. C]
Length = 245
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + L K L+ V W RH+ + + ++ P D+GSG G
Sbjct: 27 EFFPEAVRYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PGI ++ ++ + L+E ++ +FL+ VV+ V R +E +
Sbjct: 87 LPGIPLALVRRDLK---ITLLEPLLRRTTFLQEVVELLGLDHVTVVRGRAEEVLGKLQPV 143
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+A LD L + P L
Sbjct: 144 HVVTARAVAPLDRLAGWGVPLLRP 167
>gi|78049820|ref|YP_365995.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325927975|ref|ZP_08189196.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
gi|325928705|ref|ZP_08189877.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
gi|123583814|sp|Q3BML8|RSMG_XANC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78038250|emb|CAJ25995.1| methyltransferase GidB [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325540937|gb|EGD12507.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
gi|325541660|gb|EGD13181.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
Length = 212
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + ++ DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYIASGTL-ADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|322379072|ref|ZP_08053475.1| Methyltransferase GidB [Helicobacter suis HS1]
gi|321148564|gb|EFX43061.1| Methyltransferase GidB [Helicobacter suis HS1]
Length = 179
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ F L L+W+ NL + ++ED H+ DS++V +D+GSG GFP +
Sbjct: 5 LQRFATLLLEWNCIHNLSGAKSLEDI-EAHINDSIQVLDFIKPFDTCLDIGSGAGFPALP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM-ITTCDVISA 147
S+ LV K+ ++ + + K RIQ + I D+I++
Sbjct: 64 LSVFCPHARFILVEPNIKKSAFLYHVKNTLALDNLQIK--RTRIQTLNPLEIEKMDLITS 121
Query: 148 RALADLDTLLEYSFPWLY 165
RAL LL P+L
Sbjct: 122 RALMPTQDLLALGMPFLK 139
>gi|119963842|ref|YP_949870.1| 16S rRNA methyltransferase GidB [Arthrobacter aurescens TC1]
gi|166224572|sp|A1RCA8|RSMG_ARTAT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119950701|gb|ABM09612.1| methyltransferase GidB [Arthrobacter aurescens TC1]
Length = 216
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 3/141 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L+ + + + L+ + W RHV + + S D+GSG G
Sbjct: 18 ERLDLAKRYVEHLATSGTERGLIGPREIPRLWSRHVLNCAVIESAIAMDSHVADVGSGAG 77
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ +I +E + LIE ++ +L+ VV E + D
Sbjct: 78 LPGLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLDNVTIMRTRAELAVGMVDAD 134
Query: 144 VISARALADLDTLLEYSFPWL 164
V++ARA++ L L + P L
Sbjct: 135 VVTARAVSALSNLAGLTIPLL 155
>gi|330991275|ref|ZP_08315226.1| Ribosomal RNA small subunit methyltransferase G [Gluconacetobacter
sp. SXCC-1]
gi|329761294|gb|EGG77787.1| Ribosomal RNA small subunit methyltransferase G [Gluconacetobacter
sp. SXCC-1]
Length = 208
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/153 (37%), Positives = 88/153 (57%), Gaps = 7/153 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPS 73
L + +VSRET E+LE + + L+W++KINLVS + W RH+ DSL++ +
Sbjct: 7 LPSGLDVSRETHERLERYADILLRWNQKINLVSPHDLPHLWSRHIADSLQLAALIPAGAP 66
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+GSGGGFPG++ + V LIES +KA+FLR + + +V A R++
Sbjct: 67 GLVDMGSGGGFPGLVIACA----TDARVTLIESDQRKAAFLREAARVAGVQVRVCAQRLE 122
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+A + V++ARALA L LLE+ +L
Sbjct: 123 QAD--VPPALVVTARALAPLPLLLEWGARFLRP 153
>gi|229822694|ref|YP_002884220.1| methyltransferase GidB [Beutenbergia cavernae DSM 12333]
gi|259495490|sp|C5C6N4|RSMG_BEUC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229568607|gb|ACQ82458.1| methyltransferase GidB [Beutenbergia cavernae DSM 12333]
Length = 212
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
F L + ++ L+ V W+RH+ +S V + P D+G+G G PG++ +
Sbjct: 27 RFGELLAEHGEERGLIGPREVPRLWLRHIVNSAAVARWLPDAGSVADVGTGAGLPGVVLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ ++ V+L+E ++ ++L + + + ++ARA+
Sbjct: 87 LMRPDLD---VHLVEPMERRVAWLSELRDELDLDNVTLHQVQAQELHGKLKVQAVTARAV 143
Query: 151 ADLDTLLEYSFPWLYQK 167
A L L ++ P L ++
Sbjct: 144 APLGKLARWTLPLLSRR 160
>gi|289770499|ref|ZP_06529877.1| GidB [Streptomyces lividans TK24]
gi|289700698|gb|EFD68127.1| GidB [Streptomyces lividans TK24]
Length = 247
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 35 RYAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 94
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 95 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKLPPVHVVTARA 151
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 152 VAPLDRLATWGIPLLRP 168
>gi|256786607|ref|ZP_05525038.1| 16S rRNA methyltransferase GidB [Streptomyces lividans TK24]
Length = 223
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 11 RYAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 70
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 71 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKLPPVHVVTARA 127
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 128 VAPLDRLATWGIPLLRP 144
>gi|163782943|ref|ZP_02177938.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
gi|159881623|gb|EDP75132.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
Length = 202
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ + + +S+E EK + +W++ NL S E+ RH DSL +
Sbjct: 1 MPELIERLFSEAGFELSQEDAEKFGLYLEELKRWNRVHNLTSVKKDEEIVRRHFIDSLSL 60
Query: 66 FQLHPYPSIWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ + D+GSG GFPG+ I L IE + LIES +KK SFL Y+
Sbjct: 61 VRCFVELGVRWQGKVFADVGSGAGFPGVPLKIYLKDIE---LFLIESVSKKCSFLEYLKL 117
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
+ V R + + + D++ +RA+ + + +
Sbjct: 118 RLNMDWTVICERAERVDR---SFDIVVSRAMGEFEEI 151
>gi|6539746|gb|AAF16006.1|AF187159_6 GidB [Streptomyces coelicolor A3(2)]
Length = 257
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 45 RYAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 104
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 105 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKLPPVHVVTARA 161
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 162 VAPLDRLATWGIPLLRP 178
>gi|21222292|ref|NP_628071.1| 16S rRNA methyltransferase GidB [Streptomyces coelicolor A3(2)]
gi|7387701|sp|O54571|RSMG_STRCO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|2898105|gb|AAC03485.1| GidB-like [Streptomyces coelicolor A3(2)]
gi|4808381|emb|CAB42703.1| conserved hypothetical GidB-family protein [Streptomyces coelicolor
A3(2)]
Length = 239
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKLPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|146299509|ref|YP_001194100.1| glucose-inhibited division protein B [Flavobacterium johnsoniae
UW101]
gi|189039389|sp|A5FJ42|RSMG_FLAJ1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146153927|gb|ABQ04781.1| methyltransferase GidB [Flavobacterium johnsoniae UW101]
Length = 209
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
+ +L + N++ +E+ + FL+ W++KIN++S ++ + +H+ +
Sbjct: 2 DEILKYFPNLTDLQIEQFQKLDFLYHNWNEKINVISRKDIDSLYTKHILHSLGIAKVMKF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPGI +I L+++I K ++ VV +
Sbjct: 62 EPGTTVLDVGTGGGFPGIPLAILFPETRFYLIDVIAK---KIKVVQGVVDALELKN--VK 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ A + D I +RA+ ++ + + + ++
Sbjct: 117 AEQKRAELVKGDFDFIVSRAVTNMPDFVSWIKDKIKKQ 154
>gi|294630332|ref|ZP_06708892.1| methyltransferase GidB [Streptomyces sp. e14]
gi|292833665|gb|EFF92014.1| methyltransferase GidB [Streptomyces sp. e14]
Length = 238
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E IT V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKITPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|38257425|sp|Q82FE3|RSMG_STRAW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 238
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E I V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVIRGRAEEVMGKIPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|29830853|ref|NP_825487.1| 16S rRNA methyltransferase GidB [Streptomyces avermitilis MA-4680]
gi|29607966|dbj|BAC72022.1| putative 16S ribosomal RNA small subunit methyltransferase
[Streptomyces avermitilis MA-4680]
Length = 246
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 35 RYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 94
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E I V++ARA
Sbjct: 95 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVIRGRAEEVMGKIPPVHVVTARA 151
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 152 VAPLDRLATWGIPLLRP 168
>gi|222530699|ref|YP_002574581.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
gi|254766875|sp|B9MQF1|RSMG_ANATD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222457546|gb|ACM61808.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
Length = 238
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 10/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ +L + N V L + L L+ +K NL + E+F I+H+ DSL
Sbjct: 3 LLDKVLEYYKVKNPLVV----KHLLIKYMNLVLEKNKLFNLTAIENEEEFVIKHIADSLS 58
Query: 65 VFQLHPYPSIW-----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ + + ID+GSG G PG+ I + S+ L + + K K + + +
Sbjct: 59 LLKFIEQENSNQNPVAIDIGSGFGAPGLFVKIAMPSVNVFLNDSNKKKCKFMNEAKESLG 118
Query: 120 KTAARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ A + + D + ARA+ L+ L EY+ P L
Sbjct: 119 ISGVNVVCERAEVLGRKEEFREKFDFVFARAVDRLNVLCEYAIPLLK 165
>gi|225377576|ref|ZP_03754797.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
gi|225210552|gb|EEG92906.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
Length = 197
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + + ++ +H DSL + +++ +D+G+G GFPGI I ++
Sbjct: 1 MNLTAITEFDEVIEKHFLDSLSLIKVYDLQKEVSVMDMGTGAGFPGIPLKIAFPNLRM-- 58
Query: 101 VNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE---APQMITTCDVISARALADLDTL 156
L +S NK+ FL+ V++K + R +E + D++ +RA+A+L +L
Sbjct: 59 -TLADSLNKRILFLQEVIEKLGLKDIDALHARAEELGKNKEYREKFDLVVSRAVANLSSL 117
Query: 157 LEYSFPWLY 165
EY P++
Sbjct: 118 EEYCVPFVK 126
>gi|302559672|ref|ZP_07312014.1| methyltransferase GidB [Streptomyces griseoflavus Tu4000]
gi|302477290|gb|EFL40383.1| methyltransferase GidB [Streptomyces griseoflavus Tu4000]
Length = 238
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
E + L + + L+ V W RH+ + + ++ P D+GSG G P
Sbjct: 22 FEDAVRYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLP 81
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV 144
GI ++ ++ + L+E ++ +FL VV+ V R +E +T V
Sbjct: 82 GIPLALVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKLTPVHV 138
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
++ARA+A LD L + P L
Sbjct: 139 VTARAVAPLDRLATWGIPLLRP 160
>gi|183985453|ref|YP_001853744.1| glucose-inhibited division protein B Gid [Mycobacterium marinum M]
gi|238690943|sp|B2HNT4|RSMG_MYCMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|183178779|gb|ACC43889.1| glucose-inhibited division protein B Gid [Mycobacterium marinum M]
Length = 228
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE + + + L+ V+ W RHV +S + +L +D+GSG G P
Sbjct: 17 LELAQRYADWLATAGVERGLLGPREVDRLWERHVLNSAVIGELLDQGERVVDIGSGAGLP 76
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCD 143
G+ +I ++ V L+E ++ FL+ VV +V R +E + + D
Sbjct: 77 GLPLAIARPDLQ---VVLLEPMLRRVEFLQEVVTDLGLAVEVVRGRAEERSVRERLGGSD 133
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
+RA+A LD L ++S P L ++
Sbjct: 134 AAVSRAVAALDKLTKWSMPLLKRE 157
>gi|260579556|ref|ZP_05847427.1| 16S rRNA methyltransferase GidB [Corynebacterium jeikeium ATCC
43734]
gi|258602327|gb|EEW15633.1| 16S rRNA methyltransferase GidB [Corynebacterium jeikeium ATCC
43734]
Length = 222
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + L+ V W RH+ +S + ++ +D+GSG G PGI +
Sbjct: 34 DYAEFLATAGIERGLLGPREVPRIWERHILNSAVLGEVIDEGCRVVDIGSGAGLPGIPLA 93
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ L+E ++ +FL + + +V R ++ + + DV ++R
Sbjct: 94 IARPDLKVQ---LLEPLLRRYNFLAEMNDQLNLGCEVVRGRAEDPTVVKALGGADVATSR 150
Query: 149 ALADLDTLLEYSFPWLY 165
A+A L L +S P +
Sbjct: 151 AVAPLGKLTRWSLPLVK 167
>gi|332654804|ref|ZP_08420546.1| 16S rRNA methyltransferase GidB [Ruminococcaceae bacterium D16]
gi|332516147|gb|EGJ45755.1| 16S rRNA methyltransferase GidB [Ruminococcaceae bacterium D16]
Length = 237
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
I+ + V E+L + L L+ ++ +NL + + H+ DS
Sbjct: 1 MKEIISSGLAELGLADRVPEHAPEQLAEYGRLMLEKNQVMNLTAIREEDGVARLHMLDSA 60
Query: 64 RVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + + D+G+G G PG+ I + S++ V L++S NK+ +L V +
Sbjct: 61 ALLNWGDFEGKTLLDVGTGAGLPGLPLKILVPSLQ---VTLLDSLNKRVDWLNEVCAQLG 117
Query: 123 ARG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
G + R +E DV++ARA+A+L L E P++
Sbjct: 118 LEGIQAVHARAEEQALVKGWRDGFDVVTARAVAELRLLCELCLPFVK 164
>gi|170077371|ref|YP_001734009.1| 16S rRNA methyltransferase GidB [Synechococcus sp. PCC 7002]
gi|169885040|gb|ACA98753.1| glucose inhibited division protein B [Synechococcus sp. PCC 7002]
Length = 249
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV------FQLHPYPSIWIDLGSGG 82
L Y ++++NL ++ EDFW +H+ DS + P ID+G+GG
Sbjct: 31 LAALYHGICDGNQRLNLTRITSPEDFWEKHLWDSYAALKLDVLAERLTQPQKVIDVGTGG 90
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
GFPGI +I + L++ K L +Q A + + P+ +
Sbjct: 91 GFPGIPLAIAFPEWQITLLDATRKKINFLVELSQTLQLNTLGIADRAETLGQDPKYRESY 150
Query: 143 DVISARALADLDTLLEYSFPWLY 165
D+ + RA+ +EY P L
Sbjct: 151 DIATIRAVGKASLCVEYLLPLLK 173
>gi|302552689|ref|ZP_07305031.1| 16S rRNA methyltransferase GidB [Streptomyces viridochromogenes DSM
40736]
gi|302470307|gb|EFL33400.1| 16S rRNA methyltransferase GidB [Streptomyces viridochromogenes DSM
40736]
Length = 238
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E I V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKIQPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|85709800|ref|ZP_01040865.1| glucose inhibited division protein B [Erythrobacter sp. NAP1]
gi|85688510|gb|EAQ28514.1| glucose inhibited division protein B [Erythrobacter sp. NAP1]
Length = 213
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-------WIDLGS 80
+L + L L +++ NL+S + E W RH+ DS ++ + P + W+DLG+
Sbjct: 28 RLHEYAGLLLAENQQQNLISKPSEEQLWERHIADSAQLLEHVPRETYGDGAPGPWLDLGT 87
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PG++ +I I+ V L+ES+ ++ FL V + + + E
Sbjct: 88 GPGLPGLVIAILCPKID---VVLVESRGRRVEFLEDCVTRLGLKNCRIEGQRLERVSPFE 144
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
+ VISARA A LD L+ S P+ ++
Sbjct: 145 SW-VISARAFASLDKLIALSAPFSTKR 170
>gi|150024517|ref|YP_001295343.1| glucose-inhibited division protein B [Flavobacterium psychrophilum
JIP02/86]
gi|189039390|sp|A6GWQ2|RSMG_FLAPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149771058|emb|CAL42525.1| Methyltransferase GidB [Flavobacterium psychrophilum JIP02/86]
Length = 209
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+L + +++ + + E L+ W+ KIN++S +++ + +HV SL + ++ +
Sbjct: 2 EEILKHFPDLTNLQITQFEKLEALYQDWNAKINVISRKDIDELYTKHVLHSLAIAKIQKF 61
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPGI +I L+++I K K + ++ + +
Sbjct: 62 EAGTYVLDVGTGGGFPGIPLAILFPETRFYLIDVILKKIKVVQAVAEALELKNVKAEQI- 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
A + D I +RA+ ++ + +
Sbjct: 121 ----RAENVKGDFDFIVSRAVTNMPDFVCW 146
>gi|153007341|ref|YP_001381666.1| methyltransferase GidB [Anaeromyxobacter sp. Fw109-5]
gi|166224344|sp|A7HIY6|RSMG_ANADF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152030914|gb|ABS28682.1| methyltransferase GidB [Anaeromyxobacter sp. Fw109-5]
Length = 215
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
V+ E L +LE F L W++K+NL + + + +H+ DSL + L +DL
Sbjct: 18 LPVAPEALPRLERFADRLLAWNRKVNLTTITDPAEVAEKHLVDSLLLLPLLDEVRTLLDL 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP-- 136
GSG G PG+ + ++E V +S KK +F++ V + + FA R + P
Sbjct: 78 GSGAGLPGVPLACARPALE---VTCCDSVAKKVAFVKAVAAELDLPVRAFAVRAEGDPEG 134
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D + +RAL+D + + +L
Sbjct: 135 EKLPRADAVVSRALSDPERWVPLGVRYLAP 164
>gi|166710246|ref|ZP_02241453.1| glucose-inhibited division protein B [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 212
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + RH+ DSL + + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPRAMVTRHLLDSLAMQPYIASGML-ADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ R A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDAPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|148240387|ref|YP_001225774.1| methyltransferase gidB [Synechococcus sp. WH 7803]
gi|166224626|sp|A5GNG2|RSMG_SYNPW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147848926|emb|CAK24477.1| Methyltransferase gidB [Synechococcus sp. WH 7803]
Length = 254
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSIWIDLGS 80
E+L L W+ ++NL EDFW+ V DSL + P ID+G+
Sbjct: 26 QREQLITLQELLRDWNTRVNLTRLVEGEDFWVTQVLDSLWPLKPELDTADTPRRCIDVGT 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEA--- 135
GGGFPG+ +I L E + L++S ++K + + + + R V R++
Sbjct: 86 GGGFPGLAVAIALPGAE---LTLVDSVSRKTAAVAAMARSLGMADRVSVRTERVERTGQD 142
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
P+ D+ ARA+A + EY P L+
Sbjct: 143 PRCRGQFDLALARAVASAPVVAEYLVPLLH 172
>gi|21674969|ref|NP_663034.1| glucose-inhibited division protein B [Chlorobium tepidum TLS]
gi|28201805|sp|Q8KAK0|RSMG_CHLTE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21648201|gb|AAM73376.1| glucose inhibited division protein B [Chlorobium tepidum TLS]
Length = 217
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYPS 73
+ V++ L L + L W+ K+NLVS ++HV S +
Sbjct: 14 QHGIPVTKNALTLLVRYARLLEAWNLKVNLVSRKEHAPVIVKHVFHSLLIARIHDFKPGE 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+DLG+GGG PGI +I L++S KK + + ++++ + R+
Sbjct: 74 TVLDLGTGGGLPGIPLAILFPET---SFLLVDSTGKKIAACKAMIKELGLENVIALHSRV 130
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+E +I D + +R +A L+ L YS L
Sbjct: 131 EELKGVI--FDTVLSRQVAPLEELCAYSARLLK 161
>gi|172041700|ref|YP_001801414.1| glucose-inhibited division protein B [Corynebacterium urealyticum
DSM 7109]
gi|171853004|emb|CAQ05980.1| glucose-inhibited division protein B [Corynebacterium urealyticum
DSM 7109]
Length = 271
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + + L+ V W RH+ +S + ++ ID+GSG G PGI
Sbjct: 81 ERYAQWLETAGIQRGLIGPREVPRIWDRHIMNSAVLEEIIEDGERVIDVGSGAGLPGIPL 140
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT---CDVIS 146
+I +++ L+E ++ FL VV+ E ++ DV++
Sbjct: 141 AIARPNVKVQ---LLEPLLRRTKFLEEVVEDLGLDNVEVHRGRAEEKAIVRKLAGADVVT 197
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L L ++S P
Sbjct: 198 SRAVAPLGRLCQWSLPLAR 216
>gi|71275823|ref|ZP_00652107.1| Glucose inhibited division protein [Xylella fastidiosa Dixon]
gi|71902298|ref|ZP_00684288.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
gi|170730196|ref|YP_001775629.1| 16S rRNA methyltransferase GidB [Xylella fastidiosa M12]
gi|71163401|gb|EAO13119.1| Glucose inhibited division protein [Xylella fastidiosa Dixon]
gi|71727951|gb|EAO30174.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
gi|167964989|gb|ACA11999.1| glucose inhibited division protein [Xylella fastidiosa M12]
Length = 238
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L+ + R + L + L ++W++ NL + + +RH+ DSL + + +
Sbjct: 44 LDILELDRAYVVPLLAYLALLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTVGRL- 102
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSG G PGI +I ++ V L+ES KKA FLR VV++ + EA
Sbjct: 103 ADLGSGPGLPGIPLAISCPPLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEVRAEA 159
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ ++ARAL L+ ++ L +
Sbjct: 160 LDEALMYEHLTARALDTLNGIVTVGGHLLKSE 191
>gi|269958142|ref|YP_003327931.1| methyltransferase GidB [Xylanimonas cellulosilytica DSM 15894]
gi|269306823|gb|ACZ32373.1| methyltransferase GidB [Xylanimonas cellulosilytica DSM 15894]
Length = 242
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + F L + + L+ V W RH+ +S V P +D+GSG G
Sbjct: 50 EAYDDVAGFGELLREQGELRGLIGPREVSRLWERHLLNSAAVVPYLPETGTLVDIGSGAG 109
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PGI+ ++ +++ V L+E ++ ++L VV++ E D
Sbjct: 110 LPGIVVAMMRLNLD---VVLVEPMERRTTWLDEVVERFGLTNVDVRRGRAEEYHGAFEAD 166
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
V+++RA+A+L L S P L +
Sbjct: 167 VVTSRAVANLAKLARMSLPLLRR 189
>gi|220904019|ref|YP_002479331.1| glucose inhibited division protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868318|gb|ACL48653.1| glucose inhibited division protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 232
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-----HPYPSI 74
+V +E LE L + + +W+K +NLV + ++ R V DS + P +
Sbjct: 21 DVPQEALEPLGIYLEMLCQWNKAMNLVGPHSWQNMLTRLVADSFHLAPFLSGLPMPAAPL 80
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
DLG+G G PGI + G ++E + K+A FL V+ +T VF ++
Sbjct: 81 TWDLGAGAGLPGIPLRMLWPD---GSYYMVEVREKRALFLSSVLSRTHLPCTHVFRGPVE 137
Query: 134 EAPQ-MITTCDVISARALADLDTLLEYSFPWLYQK 167
Q D I +RA LL+ + P L ++
Sbjct: 138 HFFQGQYYQADCIVSRAFMPWRQLLDLTLPRLRRE 172
>gi|294626435|ref|ZP_06705035.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666222|ref|ZP_06731475.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599234|gb|EFF43371.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603995|gb|EFF47393.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 212
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + ++ DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYIASGTL-ADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALAEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|254524201|ref|ZP_05136256.1| methyltransferase GidB [Stenotrophomonas sp. SKA14]
gi|219721792|gb|EED40317.1| methyltransferase GidB [Stenotrophomonas sp. SKA14]
Length = 212
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L +W+ NL + ++ RH+ DSL Q DLG+G G PGI
Sbjct: 31 LLRYLALLHRWNGTYNLTAIRDPQEMVTRHLLDSLA-MQPFVADGSLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R V++ A EA D ++AR
Sbjct: 90 LAIACPGLQ---VTLVESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGRYDQLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+ L ++ L
Sbjct: 147 AMDTLAGIVRVGGHLLRP 164
>gi|190576401|ref|YP_001974246.1| 16S rRNA methyltransferase GidB [Stenotrophomonas maltophilia
K279a]
gi|229890174|sp|B2FNF9|RSMG_STRMK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|190014323|emb|CAQ47970.1| putative glucose inhibited division protein B [Stenotrophomonas
maltophilia K279a]
Length = 212
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L +W+ NL + ++ RH+ DSL Q DLG+G G PGI
Sbjct: 31 LLRYLALLHRWNGTYNLTAIRDPQEMVTRHLLDSLA-MQPFVADGSLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R V++ A EA D ++AR
Sbjct: 90 LAIACPGLQ---VTLVESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGRYDQLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+ L ++ L
Sbjct: 147 AMDTLAGIVRVGGHLLRP 164
>gi|325677529|ref|ZP_08157193.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
gi|325551776|gb|EGD21474.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
Length = 226
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ L+ V W RHV + + +L +D+GSG G PG+
Sbjct: 29 EAYHASLASDGVVRGLIGPREVPRLWSRHVLNCGVLGELVGANESVVDVGSGAGLPGVPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVIS 146
+I + V L+E +++ +L+ +V +V R +E + + DV++
Sbjct: 89 AIARPDVR---VTLVEPLLRRSVYLQEIVDSIGLDNVRVVRGRAEEPDVVKEVGGADVVT 145
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L+ L +S P +
Sbjct: 146 SRAVAPLEKLARWSLPLVR 164
>gi|148555756|ref|YP_001263338.1| methyltransferase GidB [Sphingomonas wittichii RW1]
gi|189040720|sp|A5VA84|RSMG_SPHWW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148500946|gb|ABQ69200.1| methyltransferase GidB [Sphingomonas wittichii RW1]
Length = 217
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
V R T+ LE + L + NL+++ST E W RH+ DS ++ + P WIDL
Sbjct: 16 VPRGTMAGLEKLVAMILDEMPRQNLIAASTAESIWTRHIVDSAQLVPMVGKGGPLRWIDL 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFPG++ ++ L + L+ES+ K+ FLR++ + +V +
Sbjct: 76 GSGAGFPGMVVALMLPELRM---TLVESRRKRIDFLRFMAESLGIADRVTVAGQRLEMLE 132
Query: 139 ITTCDVISARALADLDTLLEYSFPW 163
+ DVISARA A LD LL + +
Sbjct: 133 SSPHDVISARAFAPLDRLLPLAHRF 157
>gi|322437343|ref|YP_004219555.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX9]
gi|321165070|gb|ADW70775.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX9]
Length = 207
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ E + +L + L L+W+ + NL + E+ RH +SL P + +DLGSG
Sbjct: 28 TDELITQLSDYLDLLLRWNARTNLTAIRDPEEIVTRHFGESLFAAANLPEGNTLLDLGSG 87
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFPG+ + + LV L ES+NKK++FLR ++ + +V A R + +
Sbjct: 88 AGFPGLPIQLAHLDL---LVTLAESQNKKSTFLREAIRTLGLKTQVHAARAET---LTAP 141
Query: 142 CDVISARALADL 153
D+++ RA+ D+
Sbjct: 142 FDIVTLRAVDDM 153
>gi|254384780|ref|ZP_05000117.1| methyltransferase gidB [Streptomyces sp. Mg1]
gi|194343662|gb|EDX24628.1| methyltransferase gidB [Streptomyces sp. Mg1]
Length = 245
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + L + L+ V W RH+ + + ++ P D+GSG G
Sbjct: 27 EFFPEAVRYAELLADAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PGI ++ ++ + L+E ++ +FL+ V+ V R +E +
Sbjct: 87 LPGIPLALVRRDLK---ITLLEPLLRRTNFLQEAVELLGLDHVTVVRGRAEEVLGKLQPV 143
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+A LD L + P L
Sbjct: 144 HVVTARAVAPLDRLAGWGVPLLRP 167
>gi|329938644|ref|ZP_08288040.1| glucose inhibited division protein [Streptomyces griseoaurantiacus
M045]
gi|329302135|gb|EGG46027.1| glucose inhibited division protein [Streptomyces griseoaurantiacus
M045]
Length = 213
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 2 RYAELLAETGVQRGLIGPREVPRLWERHLLNCAVLSEVVPQSVTVCDVGSGAGLPGIPLA 61
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 62 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGQLPPVHVVTARA 118
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 119 VAPLDRLATWGIPLLRP 135
>gi|21110592|gb|AAM39000.1| glucose inhibited division protein B [Xanthomonas axonopodis pv.
citri str. 306]
Length = 260
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL Q + DLG+G G PGI
Sbjct: 79 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLA-MQPYIASGALADLGTGPGLPGIP 137
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A EA D ++AR
Sbjct: 138 LAITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALAEPAAYDHLTAR 194
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 195 ALDTLAGIIAVGGHLLRP 212
>gi|77748759|ref|NP_644464.2| 16S rRNA methyltransferase GidB [Xanthomonas axonopodis pv. citri
str. 306]
gi|23821590|sp|Q8PF23|RSMG_XANAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL Q + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLA-MQPYIASGALADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALAEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|290959010|ref|YP_003490192.1| glucose inhibited division protein [Streptomyces scabiei 87.22]
gi|260648536|emb|CBG71647.1| glucose inhibited division protein [Streptomyces scabiei 87.22]
Length = 238
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
E + L + + L+ V W RH+ + + ++ P D+GSG G P
Sbjct: 22 YEDAVRYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLP 81
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV 144
GI ++ ++ + L+E ++ +FL VV+ V R +E + V
Sbjct: 82 GIPLALVRQDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVLGTLQPVHV 138
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
++ARA+A LD L + P L
Sbjct: 139 VTARAVAPLDRLAAWGIPLLRP 160
>gi|68537195|ref|YP_251900.1| glucose-inhibited division protein B [Corynebacterium jeikeium
K411]
gi|82592863|sp|Q4JSC5|RSMG_CORJK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68264794|emb|CAI38282.1| glucose-inhibited division protein B [Corynebacterium jeikeium
K411]
Length = 222
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + L+ V W RH+ +S + ++ +D+GSG G PGI +
Sbjct: 34 DYAEFLATAGIERGLLGPREVPRIWERHILNSAVLGEVIDEGCRVVDIGSGAGLPGIPLA 93
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ L+E ++ +FL V + +V R ++ + + DV ++R
Sbjct: 94 IARPDLKVQ---LLEPLLRRYNFLAEVNSQLNLGCEVVRGRAEDPAVVEALGGADVATSR 150
Query: 149 ALADLDTLLEYSFPWLY 165
A+A L L +S P +
Sbjct: 151 AVAPLGKLTRWSLPLVK 167
>gi|311897301|dbj|BAJ29709.1| putative ribosomal RNA small subunit methyltransferase G
[Kitasatospora setae KM-6054]
Length = 260
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L + + L + L+ V W RHV + + +L P D+GSG G P
Sbjct: 30 LPQAVRYTELLATAGVQRGLIGPREVPRLWDRHVLNCAVLAELLPADVSLCDVGSGAGLP 89
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
GI ++ V L+E ++ +FL VV++ E DV+
Sbjct: 90 GIPVALARPD---VSVTLLEPLLRRTTFLEEVVRELGLENVTVLRGRAEETVGKLAVDVV 146
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+ARA+A LD L + P L
Sbjct: 147 TARAVAPLDRLAGWGMPLLRP 167
>gi|239980793|ref|ZP_04703317.1| glucose-inhibited division protein B [Streptomyces albus J1074]
gi|291452652|ref|ZP_06592042.1| methyltransferase gidB [Streptomyces albus J1074]
gi|291355601|gb|EFE82503.1| methyltransferase gidB [Streptomyces albus J1074]
Length = 235
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + L+ V W RH+ + + + D+GSG G PGI +
Sbjct: 27 RYAELLADAGVRRGLIGPREVPRLWERHLLNCAVLSEAIDEGVSVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ + + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 87 LVRPDL---TITLLEPLLRRTTFLTEVVELLGLDHVTVVRGRAEEVLGKLPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A L+ L + P L
Sbjct: 144 VAPLERLAGWGVPLLRP 160
>gi|297200933|ref|ZP_06918330.1| 16S rRNA methyltransferase GidB [Streptomyces sviceus ATCC 29083]
gi|197716895|gb|EDY60929.1| 16S rRNA methyltransferase GidB [Streptomyces sviceus ATCC 29083]
Length = 238
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
E + L + + L+ V W RH+ + + ++ P D+GSG G P
Sbjct: 22 YEDAVRYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLP 81
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV 144
GI ++ ++ + L+E ++ +FL VV+ V R +E +T V
Sbjct: 82 GIPLALVREDLK---ITLLEPLLRRTTFLTEVVELLGLDHVTVVRGRAEEVMGKLTPVHV 138
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
++ARA+A LD L + P L
Sbjct: 139 VTARAVAPLDRLATWGVPLLRP 160
>gi|153811975|ref|ZP_01964643.1| hypothetical protein RUMOBE_02368 [Ruminococcus obeum ATCC 29174]
gi|149831874|gb|EDM86960.1| hypothetical protein RUMOBE_02368 [Ruminococcus obeum ATCC 29174]
Length = 200
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + ++ ++H DSL + S +D+G+G GFPG+ I +E
Sbjct: 1 MNLTGITEFQEVLVKHFLDSLACVKAVDMTKVSKIMDIGTGAGFPGVPLKIAFPHLEAC- 59
Query: 101 VNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTL 156
L++S K+ +FL R +E D+ +RA+++L TL
Sbjct: 60 --LLDSLKKRVNFLEETFALLKLENITAIHGRAEEFAKNKAYREQYDLCVSRAVSNLATL 117
Query: 157 LEYSFPWLY 165
EY P++
Sbjct: 118 SEYCLPYVK 126
>gi|297158785|gb|ADI08497.1| 16S rRNA methyltransferase GidB [Streptomyces bingchenggensis
BCW-1]
Length = 237
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLADVGVTRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ + + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 87 LTRPDLR---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGKLPPMHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLRP 160
>gi|302872908|ref|YP_003841544.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
gi|302575767|gb|ADL43558.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
Length = 238
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-----IDLGS 80
+ F L+ +K NL + E+F ++H+ DSL + + ID+GS
Sbjct: 20 KQLFIKFMNFVLEKNKLFNLTAIEDEEEFVLKHIADSLSLIKFVEEECSNQNPVAIDIGS 79
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMI 139
G G PGI I + ++ L + + K + ++ ++ A + + +
Sbjct: 80 GFGAPGIFIKIAMPNMNMFLNDSNKKKCNFMTEAVKMLGISSVNVVCERAEVLGKKEEFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D + ARA+ L+ L EY+ P L
Sbjct: 140 ERFDFVFARAVDSLNVLCEYALPLLK 165
>gi|126667598|ref|ZP_01738567.1| glucose-inhibited division protein B [Marinobacter sp. ELB17]
gi|126627867|gb|EAZ98495.1| glucose-inhibited division protein B [Marinobacter sp. ELB17]
Length = 215
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +L F L KW+K NL + + R + DSL +
Sbjct: 11 LDEGLAQMELKLDASQQRQLLAFLALLAKWNKAFNLTAVRDEREMVSRQLLDSLSILPFV 70
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGG PGI +I L + L++S KK FL+ V + R
Sbjct: 71 TTHHL-LDVGAGGGLPGIPLAIALPDMR---FTLLDSNGKKTRFLKQCVLELGLRNLDVI 126
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
EA Q IS+RA LD + + L
Sbjct: 127 HSRAEAYQPRELFIQISSRAFTALDNQVSWCDHLLA 162
>gi|194476666|ref|YP_002048845.1| putative glucose inhibited division protein B [Paulinella
chromatophora]
gi|171191673|gb|ACB42635.1| putative glucose inhibited division protein B [Paulinella
chromatophora]
Length = 245
Score = 81.7 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVFQLHPYPSIWIDLGSG 81
+++L+ L +W+ ++NL EDFWI V D L+ +P P ID+G+G
Sbjct: 26 QIDQLKLLQILLSEWNHRVNLTRLVEGEDFWITQVFDSLWPLQRLLNNPRPIRCIDVGTG 85
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP---- 136
GFPG+ +I L + L++S +K ++ +V+ ++ F E
Sbjct: 86 CGFPGLALAIALPE---ASLTLVDSVGRKIEAVKAIVESLGLSDRISFRIERIERTGQDL 142
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
D+ ARA+ + EY P L +
Sbjct: 143 NCRNQFDMAIARAVGTPTVVAEYLLPLLAE 172
>gi|189501182|ref|YP_001960652.1| 16S rRNA methyltransferase GidB [Chlorobium phaeobacteroides BS1]
gi|189496623|gb|ACE05171.1| methyltransferase GidB [Chlorobium phaeobacteroides BS1]
Length = 219
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 6/159 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-- 65
+I+ + L +L + L ++ NLVS +RH+ SL +
Sbjct: 8 TIIEKTCSDEGLKLDERQLGQLIKYAELLESANRITNLVSRKEQAPLLMRHIFHSLLIGL 67
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
F +D+G+GGG PGI +I LI++ KK S ++ +
Sbjct: 68 FHPFEPDEKVLDIGTGGGLPGIPLAIAFPDTR---FLLIDATGKKISACNGMIASLGLKN 124
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V A + + + D + +R +A L L Y+ L
Sbjct: 125 -VIAKKTRAEELKGVSFDTVLSRQVAPLRRLCAYTERLL 162
>gi|28198767|ref|NP_779081.1| glucose-inhibited division protein B [Xylella fastidiosa Temecula1]
gi|182681460|ref|YP_001829620.1| 16S rRNA methyltransferase GidB [Xylella fastidiosa M23]
gi|32129539|sp|Q87D24|RSMG_XYLFT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691037|sp|B2I4Q1|RSMG_XYLF2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28056858|gb|AAO28730.1| glucose inhibited division protein [Xylella fastidiosa Temecula1]
gi|182631570|gb|ACB92346.1| methyltransferase GidB [Xylella fastidiosa M23]
gi|307579911|gb|ADN63880.1| 16S rRNA methyltransferase GidB [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 212
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L+ + R + L + L ++W++ NL + + +RH+ DSL + + +
Sbjct: 18 LDILELDRAYVVPLLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTVGRL- 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSG G PGI +I S++ V L+ES KKA FLR VV++ + EA
Sbjct: 77 ADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEVRAEA 133
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ ++ARAL L+ ++ L +
Sbjct: 134 LDEALMYEHLTARALDTLNGIVTVGGHLLKSE 165
>gi|71898518|ref|ZP_00680689.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
gi|71731642|gb|EAO33702.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
Length = 254
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L+ + R + L + L ++W++ NL + + +RH+ DSL + + +
Sbjct: 60 LDILELDRAYVVPLLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTVGRL- 118
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSG G PGI +I S++ V L+ES KKA FLR VV++ + EA
Sbjct: 119 ADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEVRAEA 175
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ ++ARAL L+ ++ L +
Sbjct: 176 LDEALMYEHLTARALDTLNGIVTVGGHLLKSE 207
>gi|296131539|ref|YP_003638789.1| methyltransferase GidB [Cellulomonas flavigena DSM 20109]
gi|296023354|gb|ADG76590.1| methyltransferase GidB [Cellulomonas flavigena DSM 20109]
Length = 228
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E F+ ++ + L+ V W RH+ +S V P + +D+GSG G PG++
Sbjct: 36 ETFHAYLVEEGELRGLIGPREVARLWERHMLNSAAVVPFLPDHGVIVDVGSGAGLPGVVV 95
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISAR 148
+ + + V L+E ++ ++L VV++T +V R QE + D ++AR
Sbjct: 96 AAMRPAAQ---VILVEPMERRVAWLEDVVERTRLTNVEVRRARAQELDGAVE-ADAVTAR 151
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++ P + +
Sbjct: 152 AVASLDKLYRWTAPLVRE 169
>gi|331700389|ref|YP_004336628.1| ribosomal RNA small subunit methyltransferase G [Pseudonocardia
dioxanivorans CB1190]
gi|326955078|gb|AEA28775.1| Ribosomal RNA small subunit methyltransferase G [Pseudonocardia
dioxanivorans CB1190]
Length = 218
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L+ W RH+ + V + P S +DLGSG G PGI +
Sbjct: 15 RYAEHLATSGVDRGLIGPRETGRLWDRHILNCAVVNETIPEGSRLVDLGSGAGLPGIPLA 74
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
+ + + L+E ++ +L V+ +V R +E + DV++AR
Sbjct: 75 LARPDLR---IVLVEPLARRVDWLNEVLDDLGLPIEVERGRAEETDVRRRWGGADVVTAR 131
Query: 149 ALADLDTLLEYSFPWLY 165
A+A L L ++ P L
Sbjct: 132 AVAPLARLAGWALPLLR 148
>gi|297618520|ref|YP_003703679.1| methyltransferase GidB [Syntrophothermus lipocalidus DSM 12680]
gi|297146357|gb|ADI03114.1| methyltransferase GidB [Syntrophothermus lipocalidus DSM 12680]
Length = 216
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGFPG 86
KL F L + +K++NLVS + +H ED L + D+GSGGG PG
Sbjct: 6 KLRRFQELLERENKRVNLVSKQMSREELEKHFEDCLEFARYWDATGKLVADIGSGGGLPG 65
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ---EAPQMITTC 142
++ +I S + LIE+ +KK++FL ++ V R++
Sbjct: 66 MVLAIVFSEGKFC---LIEADSKKSAFLTMAGRELNLPNVSVITERVEAIGRDDGFRAMF 122
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D + RA+A L+ L+EY P L +
Sbjct: 123 DFVLVRAVARLNVLVEYGLPLLKR 146
>gi|289523965|ref|ZP_06440819.1| 16S rRNA methyltransferase GidB [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289502621|gb|EFD23785.1| 16S rRNA methyltransferase GidB [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 235
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
+KL + L + + L + + + H+ D L L P +D+G+GGG PG
Sbjct: 25 DKLMDYAKLLGLANSRARLTGPADPKCIFDEHIVDCLAALPLIPSNIRIVDIGTGGGLPG 84
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT--CDV 144
++ ++ V+L++S KK L +V+ V C E D+
Sbjct: 85 LVWAVCR---SDVFVDLLDSVRKKCLVLEEMVRNLNLANVVVHCSRAEEFASSNKDLYDL 141
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
+ARA++ L LLEY P + +
Sbjct: 142 AAARAVSHLGVLLEYFSPLVRR 163
>gi|84497200|ref|ZP_00996022.1| glucose-inhibited division protein B [Janibacter sp. HTCC2649]
gi|84382088|gb|EAP97970.1| glucose-inhibited division protein B [Janibacter sp. HTCC2649]
Length = 230
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
F + L+ V W RHV + + P ++ ID+GSG G PG+ +
Sbjct: 33 RFVEILADTGVTHGLIGPREVPRLWERHVLNCAVIEDAFPESAMLIDVGSGAGLPGVALA 92
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
I ++ L+E ++ +L V E + + ++ARA+
Sbjct: 93 IARPDLDIH---LVEPMQRRTDWLTTTVTDLGLDNVTVHRGRAEEFIGVLSAPWVTARAV 149
Query: 151 ADLDTLLEYSFPWL 164
A + L + P L
Sbjct: 150 ARIAKLARWCVPLL 163
>gi|313886704|ref|ZP_07820414.1| 16S rRNA methyltransferase GidB [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923866|gb|EFR34665.1| 16S rRNA methyltransferase GidB [Porphyromonas asaccharolytica
PR426713P-I]
Length = 224
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S ++L Y L+ W+ +IN++S +++ ++ HV SL + P D
Sbjct: 23 LSPTAQQQLTALYPLYKGWNARINVISRRDIDNLYLHHVMHSLALAWLLPDEPTSYTIAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G GGGFP I +I + L++ I K A + + T R++
Sbjct: 83 VGCGGGFPSIPLAILYPQYQFLLIDSIAKKLHVAQAIADEIGLT--NVSTHHTRVE---S 137
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
CD I +RA L L EY+ L+
Sbjct: 138 CDLRCDYIVSRAAMPLGLLYEYTQHMLH 165
>gi|295837763|ref|ZP_06824696.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB74]
gi|197698919|gb|EDY45852.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB74]
Length = 239
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E+ + L + L+ V W RH+ + + ++ P D+GSG G
Sbjct: 20 ESFADAVRYAELLADAGVRRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PGI ++ ++ + L+E ++ +FL VV+ V R +E +
Sbjct: 80 LPGIPLALVRRDLK---ITLLEPLLRRTNFLSEVVELLGLDHVTVVRGRAEEVLGTLQPV 136
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+A LD L + P L
Sbjct: 137 HVVTARAVAPLDRLAGWGVPLLRP 160
>gi|262039021|ref|ZP_06012355.1| 16S rRNA methyltransferase GidB [Leptotrichia goodfellowii F0264]
gi|261746931|gb|EEY34436.1| 16S rRNA methyltransferase GidB [Leptotrichia goodfellowii F0264]
Length = 234
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSIWIDLGSG 81
++ +EK+ F L + +K +NL + ++ +H DS L + +ID+G+G
Sbjct: 21 KDKIEKMLQFSELLYEKNKFMNLTAIRDKKEIIEKHFIDSLLLTKIIKEDEKKFIDVGTG 80
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMI 139
GFPG++ SI E L++S KK F+ V++K + + E
Sbjct: 81 AGFPGLVLSIYYPEKE---FLLVDSVRKKVEFINEVIEKLDLKNVKTSSERAEELIKNKR 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
+ D R +A+L +LEY P+L
Sbjct: 138 ESFDTALCRGVANLRIILEYMIPFLK 163
>gi|148653200|ref|YP_001280293.1| 16S rRNA methyltransferase GidB [Psychrobacter sp. PRwf-1]
gi|189040712|sp|A5WFA2|RSMG_PSYWF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148572284|gb|ABQ94343.1| methyltransferase GidB [Psychrobacter sp. PRwf-1]
Length = 225
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+Y + +++L ++S E KL + L W+K NL + ++ I+HV D
Sbjct: 13 QYDELDTLLLEAITQLKIDISAEQRRKLLLYLDKLLFWNKAYNLTAIKQPKEALIKHVID 72
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + H P +D+G+G G PG+I +I + +++S KK F+R + +
Sbjct: 73 CLAI-LPHLKPGKLLDIGTGAGLPGVIVAICEPERP---ITVLDSNQKKIRFIRQSISEL 128
Query: 122 AA-RGKVFACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWLYQ 166
A RI+ V+++RA A L +E + P L Q
Sbjct: 129 QVTNVTPVASRIENFNPDEGDKFAVVTSRAFASLTDFVEAAAPRLAQ 175
>gi|318058976|ref|ZP_07977699.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SA3_actG]
gi|318077330|ref|ZP_07984662.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SA3_actF]
gi|333025725|ref|ZP_08453789.1| putative 16S rRNA methyltransferase GidB [Streptomyces sp. Tu6071]
gi|332745577|gb|EGJ76018.1| putative 16S rRNA methyltransferase GidB [Streptomyces sp. Tu6071]
Length = 239
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E+ + L + L+ V W RH+ + + ++ P D+GSG G
Sbjct: 20 ESFADAVRYAELLADAGVRRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PGI ++ ++ + L+E ++ +FL VV+ V R +E +
Sbjct: 80 LPGIPLALVRRDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVLGTLQPV 136
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+A LD L + P L
Sbjct: 137 HVVTARAVAPLDRLAGWGVPLLRP 160
>gi|302520507|ref|ZP_07272849.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB78]
gi|302429402|gb|EFL01218.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB78]
Length = 239
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E+ + L + L+ V W RH+ + + ++ P D+GSG G
Sbjct: 20 ESFADAVRYAELLADAGVRRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PGI ++ ++ + L+E ++ +FL VV+ V R +E +
Sbjct: 80 LPGIPLALVRRDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVLGTLQPV 136
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+A LD L + P L
Sbjct: 137 HVVTARAVAPLDRLAGWGVPLLRP 160
>gi|86608642|ref|YP_477404.1| 16S rRNA methyltransferase GidB [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123502737|sp|Q2JMA3|RSMG_SYNJB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86557184|gb|ABD02141.1| methyltransferase GidB [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 260
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-------LHPYPSIWIDLGSGGGFP 85
Y L + ++ NL + DFW +H+ DSLR + + P ID+G+G GFP
Sbjct: 41 YPLVMAGNRTQNLTRITDPIDFWEKHLWDSLRGLRLLGSWEAIQAQPWRGIDIGTGAGFP 100
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR----GKVFACRIQEAPQMITT 141
GI I L L++S +K +F++ ++Q+ + A + PQ +
Sbjct: 101 GIPAQIALPQTR---FTLLDSTQRKIAFVQDILQRLSLTQARAVAQRAEIWGQDPQERGS 157
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
D+ ARALA + EY P L
Sbjct: 158 YDIALARALASAEICAEYCLPLLK 181
>gi|284993434|ref|YP_003411989.1| methyltransferase GidB [Geodermatophilus obscurus DSM 43160]
gi|284066680|gb|ADB77618.1| methyltransferase GidB [Geodermatophilus obscurus DSM 43160]
Length = 223
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + L+ V W RH+ +S V P + +D+GSG G PGI
Sbjct: 33 ERYVARLATDGVTRGLIGPREVPRLWERHILNSAAVADAVPPGARVVDVGSGAGLPGIPL 92
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
++ + + L+E ++ FL VV + A +V R +E + DV++A
Sbjct: 93 ALARPDLR---LTLVEPMARRVEFLEEVVAELGAPWRVVRGRAEERSVRAAVGPVDVVTA 149
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L L+ + L
Sbjct: 150 RAVAALPRLVSWCRGLLRP 168
>gi|93005885|ref|YP_580322.1| methyltransferase GidB [Psychrobacter cryohalolentis K5]
gi|122415520|sp|Q1QBW5|RSMG_PSYCK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|92393563|gb|ABE74838.1| methyltransferase GidB [Psychrobacter cryohalolentis K5]
Length = 238
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 60/158 (37%), Gaps = 6/158 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL +S + L + L W+K NL + + + I+HV D L +
Sbjct: 37 ILAQAIDELGLTLSAQQQRSLLLYLDQLLLWNKAYNLTAITDPVEALIKHVIDCLAI-IT 95
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
H +D+G+G G P +I +I ++S KK F++ V +
Sbjct: 96 HLPSGSLLDIGTGAGLPAVIIAICQPE---RSCTALDSNQKKIRFIKQVSSELGLSN--M 150
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI++RA A L + + P L
Sbjct: 151 QPIASRIEAHEASYDVITSRAFASLIDFVAVAEPRLAD 188
>gi|307330011|ref|ZP_07609163.1| methyltransferase GidB [Streptomyces violaceusniger Tu 4113]
gi|306884387|gb|EFN15421.1| methyltransferase GidB [Streptomyces violaceusniger Tu 4113]
Length = 237
Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYGELLADVGVTRGLIGPREVPRLWERHLLNCAVLSEVVPEEVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FLR VV+ V R +E +T V++ARA
Sbjct: 87 LTRPDLQ---ITLLEPLLRRTNFLREVVELLGLEHVTVVRGRAEEVLGKLTPMHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLRP 160
>gi|303327750|ref|ZP_07358190.1| methyltransferase GidB [Desulfovibrio sp. 3_1_syn3]
gi|302862111|gb|EFL85045.1| methyltransferase GidB [Desulfovibrio sp. 3_1_syn3]
Length = 261
Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-----VFQLHPYPSI 74
+V LE L + + +W+ +NLV + + +D R V DS P +
Sbjct: 38 DVPSAALEPLAVYLEMLCRWNAAMNLVGARSWQDILARLVADSFHLASFLEELPLPEEPL 97
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
DLGSG G PGI + + G ++E + ++A FL ++ + VF ++
Sbjct: 98 SWDLGSGAGLPGIPLRM---AWTRGGYYMVEVRERRALFLSSILARLQLSATHVFRGSVE 154
Query: 134 EAPQ-MITTCDVISARALADLDTLLEYSFPWLYQK 167
Q D I +RA LLE + P L +
Sbjct: 155 HFFQGQYYQADCIVSRAFMPWPELLELTLPRLRPE 189
>gi|194367739|ref|YP_002030349.1| 16S rRNA methyltransferase GidB [Stenotrophomonas maltophilia
R551-3]
gi|238693455|sp|B4SNP6|RSMG_STRM5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|194350543|gb|ACF53666.1| methyltransferase GidB [Stenotrophomonas maltophilia R551-3]
Length = 212
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L +W+ NL + ++ RH+ DSL Q DLG+G G PGI
Sbjct: 31 LLRYLALLHRWNGTYNLTAIRDPQEMVTRHLLDSLA-MQPFVADGSLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R V++ A EA D ++AR
Sbjct: 90 LAIACPGLQ---VTLVESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGHYDQLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+ L ++ L
Sbjct: 147 AMDTLAGIVRVGGHLLRP 164
>gi|270284634|ref|ZP_05966436.2| 16S rRNA methyltransferase GidB [Bifidobacterium gallicum DSM
20093]
gi|270276574|gb|EFA22428.1| 16S rRNA methyltransferase GidB [Bifidobacterium gallicum DSM
20093]
Length = 267
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 56/168 (33%), Gaps = 31/168 (18%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------DLG 79
L KL+ FY ++ L+ W RH+ +S V D+G
Sbjct: 44 LPKLQAFYAKLEAEGEERGLIGPRDQNILWERHLLNSAAVVPFMRQAFDHAQFKTVADVG 103
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA---- 135
SGGGFPG++ + L LIE ++ +L ++ V E
Sbjct: 104 SGGGFPGLVAAAMLPEAR---FTLIEPMERRCVWLNECIETMELNNTVVVRARAEEAIGA 160
Query: 136 ------------------PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ V++ RA+A + L ++ P +
Sbjct: 161 LELAHGRKSKTPVPAEVTESIRHPFTVVTCRAVAPMTKLAAWTMPLVA 208
>gi|9107033|gb|AAF84737.1|AE004013_3 glucose inhibited division protein [Xylella fastidiosa 9a5c]
Length = 238
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W++ NL + + +RH+ DSL + + + DLGSG G PGI
Sbjct: 57 LLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTVGRL-ADLGSGPGLPGIP 115
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I S++ V L+ES KKA FLR VV++ + EA T + ++AR
Sbjct: 116 LAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEVRAEALDEALTYEHLTAR 172
Query: 149 ALADLDTLLEYSFPWLYQK 167
AL L+ ++ L +
Sbjct: 173 ALDTLNGIVTVGGHLLKSE 191
>gi|77747572|ref|NP_299217.2| 16S rRNA methyltransferase GidB [Xylella fastidiosa 9a5c]
gi|23821641|sp|Q9PC50|RSMG_XYLFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W++ NL + + +RH+ DSL + + + DLGSG G PGI
Sbjct: 31 LLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTVGRL-ADLGSGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I S++ V L+ES KKA FLR VV++ + EA T + ++AR
Sbjct: 90 LAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEVRAEALDEALTYEHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQK 167
AL L+ ++ L +
Sbjct: 147 ALDTLNGIVTVGGHLLKSE 165
>gi|116672709|ref|YP_833642.1| 16S rRNA methyltransferase GidB [Arthrobacter sp. FB24]
gi|116612818|gb|ABK05542.1| 16S rRNA m(7)G-527 methyltransferase [Arthrobacter sp. FB24]
Length = 228
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 3/139 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE E + + L+ V W RHV + + + S D+GSG G P
Sbjct: 32 LELAERYVEHLATSGTERGLIGPREVPRLWSRHVLNCAVIEREIARGSHVADVGSGAGLP 91
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G+ +I +E + LIE ++ +L+ VV E + DV+
Sbjct: 92 GLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLTNVTVMRTRAELAVGMVNADVV 148
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA++ L L + P L
Sbjct: 149 TARAVSALSNLAGLTIPLL 167
>gi|189039680|sp|A0K2M2|RSMG_ARTS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 216
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 3/139 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE E + + L+ V W RHV + + + S D+GSG G P
Sbjct: 20 LELAERYVEHLATSGTERGLIGPREVPRLWSRHVLNCAVIEREIARGSHVADVGSGAGLP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G+ +I +E + LIE ++ +L+ VV E + DV+
Sbjct: 80 GLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLTNVTVMRTRAELAVGMVNADVV 136
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA++ L L + P L
Sbjct: 137 TARAVSALSNLAGLTIPLL 155
>gi|193216516|ref|YP_001999758.1| glucose-inhibited division protein B [Mycoplasma arthritidis
158L3-1]
gi|193001839|gb|ACF07054.1| glucose-inhibited division protein B [Mycoplasma arthritidis
158L3-1]
Length = 173
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE-----DSLRVFQLHPYPSIW 75
++ + + L +Y+L ++K NL S + +E ++ L+ +
Sbjct: 18 LNNKQKQDLYDYYYLIETENQKYNLTGFSDEKLICEGLIESILIFQAITSSILNLDSKVV 77
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSG GFP + I + + + E NK+ +FL V+ K + E
Sbjct: 78 LDIGSGVGFPILPYFIINPT---FNLTIYEPINKRVNFLEMVIAKLNLQNITIKKIRAED 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D ISARA+++L L+E S L Q
Sbjct: 135 SKETEKFDFISARAVSELKNLMEISHHLLKQ 165
>gi|302543971|ref|ZP_07296313.1| 16S rRNA methyltransferase GidB [Streptomyces hygroscopicus ATCC
53653]
gi|302461589|gb|EFL24682.1| 16S rRNA methyltransferase GidB [Streptomyces himastatinicus ATCC
53653]
Length = 237
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYGELLADVGVTRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ + + L+E ++ +FLR VV+ V R +E + V++ARA
Sbjct: 87 LTRPDLR---ITLLEPLLRRTNFLREVVELLGLEHVTVVRGRAEEVLGKLPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLRP 160
>gi|85375439|ref|YP_459501.1| glucose inhibited division protein B [Erythrobacter litoralis
HTCC2594]
gi|122543370|sp|Q2N6I7|RSMG_ERYLH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84788522|gb|ABC64704.1| glucose inhibited division protein B [Erythrobacter litoralis
HTCC2594]
Length = 207
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLGSGGGF 84
+E++E +++ NLVS ++ + W RH+ DS ++ + W+DLGSG GF
Sbjct: 21 MERIEALVAALRSENERQNLVSKGSLGEVWQRHIADSAQLLDHVSRETGLWLDLGSGAGF 80
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG++ + V L+ES+ K+ +L +V+ A E + V
Sbjct: 81 PGLVVAAMQPEKP---VLLVESRRKRVEWLTDMVKALKLENCDVAGMRLELLEARE-AGV 136
Query: 145 ISARALADLDTLLEYSFPW 163
ISARA A L+ LL S +
Sbjct: 137 ISARAFAPLEKLLRLSARF 155
>gi|312142022|ref|YP_004009358.1| methyltransferase gidb [Rhodococcus equi 103S]
gi|311891361|emb|CBH50682.1| methyltransferase GidB [Rhodococcus equi 103S]
Length = 226
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ L+ V W RHV + + +L +D+GSG G PG+
Sbjct: 29 EAYHASLASDGVVRGLIGPREVPRLWSRHVLNCGVLGELVGANESVVDVGSGAGLPGVPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP--QMITTCDVIS 146
+I + V L+E +++ +L+ V V R ++ + + DV++
Sbjct: 89 AIARPDVR---VTLVEPLLRRSVYLQEFVDSVGLSNVTVVRGRAEQEGVVKEVGGADVVT 145
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L+ L +S P +
Sbjct: 146 SRAVAPLEKLARWSLPLVR 164
>gi|325677527|ref|ZP_08157191.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
gi|325551774|gb|EGD21472.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
Length = 228
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ L+ V W RHV + + +L +D+GSG G PG+
Sbjct: 29 EAYHASLASDGVVRGLIGPREVPRLWSRHVLNCGVLGELVGANESVVDVGSGAGLPGVPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP--QMITTCDVIS 146
+I + V L+E +++ +L+ V V R ++ + + DV++
Sbjct: 89 AIARPDVR---VTLVEPLLRRSVYLQEFVDSVGLSNVTVVRGRAEQEGVVKEVGGADVVT 145
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L+ L +S P +
Sbjct: 146 SRAVAPLEKLARWSLPLVR 164
>gi|119513128|ref|ZP_01632180.1| glucose-inhibited division protein B [Nodularia spumigena CCY9414]
gi|119462225|gb|EAW43210.1| glucose-inhibited division protein B [Nodularia spumigena CCY9414]
Length = 246
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-------LRVFQLHPYPSIWIDLGSGGGF 84
Y L + ++++NL + +DFW +H+ DS + + ID+G+G GF
Sbjct: 31 LYELIVLGNQQLNLTRITDPQDFWEKHLWDSLRGIAPQGQFIPSLSENASIIDIGTGAGF 90
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA---PQMIT 140
PGI +I + + + L++S KK +F+ + + K R +E PQ
Sbjct: 91 PGIPVAITVPN---CTITLLDSTRKKINFINETLTQLTLSNAKTLVGRAEEIGHHPQHRK 147
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
T D+ RA+++ EY+ P L
Sbjct: 148 TYDIALIRAVSNAAVCAEYTLPLLK 172
>gi|71065878|ref|YP_264605.1| 16S rRNA methyltransferase GidB [Psychrobacter arcticus 273-4]
gi|123648423|sp|Q4FS37|RSMG_PSYA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71038863|gb|AAZ19171.1| probable glucose inhibited division protein [Psychrobacter arcticus
273-4]
Length = 238
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 6/158 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL +S + L + L W+K NL + + + I+HV D L +
Sbjct: 37 ILAQAIDELGITLSAQQQRTLLLYLDQLLLWNKAYNLTAITDPVEALIKHVIDCLAI-IT 95
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
H +D+G+G G P +I +I ++S KK F++ + +
Sbjct: 96 HLPSGSLLDIGTGAGLPAVIIAICQPE---RSCTALDSNQKKIRFIKQISSELGLSN--M 150
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV+++RA A L +E + P L
Sbjct: 151 QPIASRIEAHEVSYDVVTSRAFASLIDFVEVAQPRLAD 188
>gi|260893977|ref|YP_003240074.1| methyltransferase GidB [Ammonifex degensii KC4]
gi|260866118|gb|ACX53224.1| methyltransferase GidB [Ammonifex degensii KC4]
Length = 241
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWI 76
++ EK+ + L W ++ +L + E+ I H DSL P I
Sbjct: 19 GLSLPPGAQEKMGRHFALLSLWGRRSSLTAIRGAEEAAILHYLDSLAPLAHLPPPEGPCI 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSG GFPG+ ++ L +E L+E+ KK FLR V+++ + + R +E
Sbjct: 79 DVGSGAGFPGVPLALALPEVE---FVLLEATRKKVEFLRRVIEEISLPNCRAVWGRAEEY 135
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ + + ARA+A L L EY+ P++
Sbjct: 136 GKIAGYRESFAWVVARAVAPLRELAEYTLPFVR 168
>gi|113477232|ref|YP_723293.1| 16S rRNA methyltransferase GidB [Trichodesmium erythraeum IMS101]
gi|123056302|sp|Q10Y54|RSMG_TRIEI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110168280|gb|ABG52820.1| methyltransferase GidB [Trichodesmium erythraeum IMS101]
Length = 255
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 8/150 (5%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-------VFQLHPYPSIWI 76
E ++ + Y L + +KK+NL + E+FW +H+ DSLR I
Sbjct: 27 EQKQQFQKLYELIILGNKKLNLTRITKPEEFWEKHLWDSLRGIKFILENKIHWSEEKKVI 86
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA-SFLRYVVQKTAARGKVFACRIQEA 135
D+G+G GFPG++ +I L L++ K + L + K A +I
Sbjct: 87 DIGTGAGFPGLLVAIILPQYAVTLLDSTRKKISFIENILTDLNIKNALTITNRVEQIGRL 146
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ T D+ RA+A EY+ P L
Sbjct: 147 FKYRETYDIGLLRAVASTVVCAEYALPLLK 176
>gi|228471211|ref|ZP_04056024.1| 16S rRNA methyltransferase GidB [Porphyromonas uenonis 60-3]
gi|228307026|gb|EEK16108.1| 16S rRNA methyltransferase GidB [Porphyromonas uenonis 60-3]
Length = 224
Score = 80.9 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S ++L Y L+ +W+ +IN++S +++ ++ HV SL + P D
Sbjct: 23 LSPTATQQLTALYPLYREWNARINVISRRDIDNLYLHHVMHSLALAWLLPDEPTSFTIAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G GGGFP I +I + L++ I K A + + T R++
Sbjct: 83 VGCGGGFPSIPLAILFPQYQFLLIDSIAKKLHVAQSIADEIGLT--NVSTHHTRVE---S 137
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
CD + +RA L+ L +Y+ L+
Sbjct: 138 CDLCCDYVVSRAAMPLELLHKYTQHMLH 165
>gi|193211880|ref|YP_001997833.1| 16S rRNA methyltransferase GidB [Chlorobaculum parvum NCIB 8327]
gi|193085357|gb|ACF10633.1| methyltransferase GidB [Chlorobaculum parvum NCIB 8327]
Length = 244
Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSIWIDLGSGGG 83
L+ L + L +W+ K+NL+S ++HV S+ +DLG+GGG
Sbjct: 51 LKLLVRYTELLEEWNHKVNLISRKEDAPVIVKHVFHSMLISRIHDFKPGEKVLDLGTGGG 110
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
PGI +I L++S KK + + ++++ R++E +I
Sbjct: 111 LPGIPLAILFPET---SFLLVDSTGKKIAACKAMIKELGLGNVMAVHSRVEELRGVI--F 165
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D + +R +A L+ L Y L +
Sbjct: 166 DTVLSRQVAPLEELCSYCTTLLKR 189
>gi|110637602|ref|YP_677809.1| 16S rRNA methyltransferase GidB [Cytophaga hutchinsonii ATCC 33406]
gi|123163685|sp|Q11VU7|RSMG_CYTH3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110280283|gb|ABG58469.1| 16S rRNA m(7)G-527 methyltransferase [Cytophaga hutchinsonii ATCC
33406]
Length = 207
Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 14 YLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHP 70
+ + ++S E +++ + L+ +W++KIN+VS ++ + RHV +
Sbjct: 3 IIEKYFKHLSPEQVKQFGALHSLYTEWNEKINVVSRKDIDQLYERHVLHSLGIAKVMAFK 62
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D+G+GGGFPGI SI + L++ I K K + +
Sbjct: 63 PGTRILDVGTGGGFPGIPLSILFPESDFHLIDSIGKKIKVVEEVSAGAG--IKNIRTTHG 120
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R ++ + +RA+ + + +K
Sbjct: 121 RAEDVTD---RYHFVVSRAVTRFKPFWGW----VAKK 150
>gi|256826454|ref|YP_003150414.1| glucose-inhibited division protein B [Kytococcus sedentarius DSM
20547]
gi|256689847|gb|ACV07649.1| glucose-inhibited division protein B [Kytococcus sedentarius DSM
20547]
Length = 241
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 6/143 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + E F L + L+ V W RHV + V + +D+GSG G
Sbjct: 27 ELLPQAERFAELLATSGAQRGLIGPREVPRLWDRHVLNCAVVADVLDGADHVLDVGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITT 141
PGI ++ V L+E ++ +L VVQ+ R V R + P +T
Sbjct: 87 LPGIALALAAPDTR---VTLVEPMLRRTVWLEEVVQELDLTDRVTVIRSRAENLPSDVT- 142
Query: 142 CDVISARALADLDTLLEYSFPWL 164
V++ARA+A L TL + P +
Sbjct: 143 APVVTARAVARLSTLAPWCLPLV 165
>gi|225620215|ref|YP_002721472.1| glucose-inhibited division protein B [Brachyspira hyodysenteriae
WA1]
gi|254766883|sp|C0R0Y0|RSMG_BRAHW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225215034|gb|ACN83768.1| glucose-inhibited division protein B [Brachyspira hyodysenteriae
WA1]
Length = 204
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N + + N + EKL + L + ++K +N+ + T EDF+ H+ D L
Sbjct: 1 MNYDSILDNISNIIKIDENKKEKLIQYASLVIDYNKNVNITGAKTEEDFFNDHIADCLLA 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ ID+GSG G P I +I + + L ESKNKKA FLR K
Sbjct: 61 LDIFYDYDNIIDIGSGSGLPSIPLAIIFNDKK---FTLCESKNKKAEFLRLAKDKLGLDN 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ A ++ D I++RA +D+ TLL+ +K
Sbjct: 118 --IEVKCINAYEIKEKYDTITSRAFSDISTLLKIFNKLKTKK 157
>gi|170288026|ref|YP_001738264.1| methyltransferase GidB [Thermotoga sp. RQ2]
gi|193806454|sp|B1L800|RSMG_THESQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170175529|gb|ACB08581.1| methyltransferase GidB [Thermotoga sp. RQ2]
Length = 228
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+S+ N LL +EK++ + L NL + ++ ++V + L
Sbjct: 1 MDSV--KNILLEYGLRFQEPQIEKVDKYIEELL--GVPYNLTAHRDLDSAVHKNVVEILL 56
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ ++ +D+GSG G PG+I +I ++ V L++S+ K +FLR V++K
Sbjct: 57 PLKEELKGTL-LDVGSGNGVPGLILAIFFPKLK---VVLLDSREKSVNFLRGVIEKLDLG 112
Query: 124 RGKVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
R + + D ++ARA+A L+ L+E P L
Sbjct: 113 NVSAVKERAENFSRERREEFDYVTARAVARLNVLVEICTPALK 155
>gi|227506192|ref|ZP_03936241.1| glucose-inhibited division protein B [Corynebacterium striatum ATCC
6940]
gi|227197216|gb|EEI77264.1| glucose-inhibited division protein B [Corynebacterium striatum ATCC
6940]
Length = 169
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
+ V W RH+ + + ++ P + ID+GSG G PGI +I ++ + LIE
Sbjct: 1 MGPREVPRLWDRHILNCAVIGEVMPEGARVIDVGSGAGLPGIPLAIARPDLD---ITLIE 57
Query: 106 SKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSFP 162
K++++L V + V R +E + + D++++RA+A L L ++S P
Sbjct: 58 PLLKRSNYLLEVKEMLGLDNVTVIRGRAEEGPVKKAVKGADIVTSRAVAPLGKLAKWSLP 117
Query: 163 WLY 165
+
Sbjct: 118 LVK 120
>gi|298490143|ref|YP_003720320.1| methyltransferase GidB ['Nostoc azollae' 0708]
gi|298232061|gb|ADI63197.1| methyltransferase GidB ['Nostoc azollae' 0708]
Length = 251
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDS-------LRVFQLHPYPSIWIDLGSGGGFP 85
Y L L+ ++++NL + E+FW +H+ DS + + ID+G+G GFP
Sbjct: 38 YKLILEGNRQLNLTRITEPEEFWEKHLWDSLKGIAPKQQFIPFLNQNASVIDIGTGAGFP 97
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA---PQMITT 141
G+ SI S + V L++S KK +F+ V+ + K R++E +
Sbjct: 98 GVPISIIFLSCQ---VTLLDSTRKKINFIDTVLSNLSLTNAKTLVGRVEEIGQENKHREN 154
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D+ RA+ EYS P + +
Sbjct: 155 YDLAVIRAVGSASACAEYSLPLVKK 179
>gi|119718912|ref|YP_925877.1| methyltransferase GidB [Nocardioides sp. JS614]
gi|189045870|sp|A1SQV5|RSMG_NOCSJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119539573|gb|ABL84190.1| 16S rRNA m(7)G-527 methyltransferase [Nocardioides sp. JS614]
Length = 250
Score = 80.5 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 64/160 (40%), Gaps = 18/160 (11%)
Query: 20 NVSRET---------------LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+VSRET L E F L L+ W RH+ +
Sbjct: 4 DVSRETPSVPDVARRVFASDRLSLAERFVELLAGDGVVRGLIGPRETPRLWDRHLLNCAL 63
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ Q P + DLGSG G PG++ +I + V L+E ++ +FL VV +
Sbjct: 64 LAQQVPLEATVADLGSGAGLPGVVLAIARPDLR---VTLVEPLLRRTTFLEEVVAELGLD 120
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
EA V+++RALA LD LL +S P +
Sbjct: 121 RVEVLRARAEALHGDRRFAVVTSRALAPLDRLLGWSMPLV 160
>gi|220909373|ref|YP_002484684.1| methyltransferase GidB [Cyanothece sp. PCC 7425]
gi|219865984|gb|ACL46323.1| methyltransferase GidB [Cyanothece sp. PCC 7425]
Length = 231
Score = 80.1 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------VFQLHPYPSIWIDLGSGGG 83
Y L L ++++NL + +FW +H+ DSL ID+G+G G
Sbjct: 35 LYELILTGNQQLNLTRITAPLEFWEKHLWDSLSGIAPFLSPAQTDTSSHWQAIDIGTGAG 94
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMIT-- 140
FPG++ +I + + LI+S KK S+L V + + R +E Q
Sbjct: 95 FPGLVVAIVRPDWQ---LTLIDSTRKKISWLESTVAELGLSNVRPIWGRAEELNQHPGYH 151
Query: 141 -TCDVISARALADLDTLLEYSFPWLYQ 166
D+ RA+A D YS P+L
Sbjct: 152 QGFDLGLIRAVASADRCAAYSLPFLKP 178
>gi|114322026|ref|YP_743709.1| methyltransferase GidB [Alkalilimnicola ehrlichii MLHE-1]
gi|122310596|sp|Q0A4L8|RSMG_ALHEH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114228420|gb|ABI58219.1| 16S rRNA m(7)G-527 methyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 220
Score = 80.1 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 4/137 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ E L + L +W++ NL + + RH+ DSL + +D
Sbjct: 18 GLTLPEGAAEALITYLRLLERWNRAYNLSAIRDPGEMLHRHLLDSLSILPYVE-GDSLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G PGI ++ + V L++S KK F R V + FA +
Sbjct: 77 VGSGAGLPGIPLALARPGL---TVTLLDSNGKKQRFTRQVALELGLHRLRFAQARLADYR 133
Query: 138 MITTCDVISARALADLD 154
D + +RA A L
Sbjct: 134 PGQPFDTVVSRAFAALS 150
>gi|308190288|ref|YP_003923219.1| methyltransferase [Mycoplasma fermentans JER]
gi|319777682|ref|YP_004137333.1| methyltransferase gidb (glucose inhibiteddivision protein b)
[Mycoplasma fermentans M64]
gi|307625030|gb|ADN69335.1| methyltransferase [Mycoplasma fermentans JER]
gi|318038757|gb|ADV34956.1| Methyltransferase GidB (Glucose inhibiteddivision protein B)
[Mycoplasma fermentans M64]
Length = 230
Score = 80.1 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ LL Y+ + L+ + + ++ +N+ T++D + + + DS+ F+ +
Sbjct: 6 ITKKDLLEKYS---SKISILKEYAQMIYDQNQVMNITGFKTLDDIFEQGILDSILAFENY 62
Query: 70 PYPSIWI-------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
D+G+G GFP I I L + + +IES+ K+ +FL V +
Sbjct: 63 MMHYDENLENKKILDVGAGAGFPSIPILIALDNK--FNLTIIESQKKRCNFLEKVKARFN 120
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++E ++ ++I+ARA+A + L + L +
Sbjct: 121 LSVNIINSRVEEFFKLTNYFEIITARAVASIKVLYLSAAHLLKNR 165
>gi|886320|gb|AAB53136.1| glucose-inhibited division protein B [Mycobacterium leprae]
Length = 252
Score = 80.1 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L + L+ W RH+ +S V +L +D+GSG G PG+
Sbjct: 41 QRYVDLLANTGIERGLLGPHEANRLWDRHLLNSAVVAELLDPGDRVVDIGSGAGLPGLPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ +FLR VV + +V R +E I DV +
Sbjct: 101 AIARPDLQ---VVLLEPLLRRVTFLREVVAELGLDVEVVRGRAEELWVRDRIGERDVAVS 157
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P L
Sbjct: 158 RAVAALDKLTKWSIPLLRP 176
>gi|13432164|sp|Q50203|RSMG_MYCLE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
Length = 245
Score = 80.1 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L + L+ W RH+ +S V +L +D+GSG G PG+
Sbjct: 41 QRYVDLLANTGIERGLLGPHEANRLWDRHLLNSAVVAELLDPGDRVVDIGSGAGLPGLPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ +FLR VV + +V R +E I DV +
Sbjct: 101 AIARPDLQ---VVLLEPLLRRVTFLREVVAELGLDVEVVRGRAEELWVRDRIGERDVAVS 157
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P L
Sbjct: 158 RAVAALDKLTKWSIPLLRP 176
>gi|15828466|ref|NP_302729.1| 16S rRNA methyltransferase GidB [Mycobacterium leprae TN]
gi|221230943|ref|YP_002504359.1| 16S rRNA methyltransferase GidB [Mycobacterium leprae Br4923]
gi|254766899|sp|B8ZTN3|RSMG_MYCLB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13093896|emb|CAC32240.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219934050|emb|CAR72808.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 248
Score = 80.1 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L + L+ W RH+ +S V +L +D+GSG G PG+
Sbjct: 44 QRYVDLLANTGIERGLLGPHEANRLWDRHLLNSAVVAELLDPGDRVVDIGSGAGLPGLPL 103
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ +FLR VV + +V R +E I DV +
Sbjct: 104 AIARPDLQ---VVLLEPLLRRVTFLREVVAELGLDVEVVRGRAEELWVRDRIGERDVAVS 160
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P L
Sbjct: 161 RAVAALDKLTKWSIPLLRP 179
>gi|325965290|ref|YP_004243196.1| 16S rRNA m(7)G-527 methyltransferase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323471377|gb|ADX75062.1| 16S rRNA m(7)G-527 methyltransferase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 216
Score = 80.1 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 3/139 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+ + + + L+ + W RHV + + S D+GSG G P
Sbjct: 20 LDLAKRYVEHLATSGTERGLIGPREIPRLWSRHVLNCAVIESEIAEGSHVADVGSGAGLP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G+ +I +E + LIE ++ +L+ VV E DV+
Sbjct: 80 GLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLDNVTVMRTRAELAVGQVEADVV 136
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA++ L L + P L
Sbjct: 137 TARAVSALSNLAGLTIPLL 155
>gi|256028337|ref|ZP_05442171.1| glucose inhibited division protein B [Fusobacterium sp. D11]
gi|289766263|ref|ZP_06525641.1| glucose inhibited division protein B [Fusobacterium sp. D11]
gi|289717818|gb|EFD81830.1| glucose inhibited division protein B [Fusobacterium sp. D11]
Length = 232
Score = 80.1 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKEED 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + +V R
Sbjct: 69 ETLIDIGTGAGFPGMMLAIFNEDKK---FTLLDSVRKKTDFLELVKSELGLNNIEVINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|188587517|ref|YP_001919062.1| methyltransferase GidB [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179352204|gb|ACB86474.1| methyltransferase GidB [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 250
Score = 80.1 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGF 84
E + L W+KK NL +++ + ++ H DSL + + +DLGSG GF
Sbjct: 34 ESFIVYKEELLDWNKKFNLTRTTSDQGIYLEHFLDSLIPLKYTIIDDYETMLDLGSGPGF 93
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQ---MIT 140
PG+ + I+ L+ES KK FL+ +++K +V+ R +E
Sbjct: 94 PGLPLKLAKPGIKTC---LLESNFKKVRFLKALIRKLEIPEIEVYHVRAEELAHDQLHRN 150
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
++ RA++ L+ + E S P+L
Sbjct: 151 GYSLVVNRAVSSLNVVSEISLPFL 174
>gi|238810254|dbj|BAH70044.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 231
Score = 80.1 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ LL Y+ + L+ + + ++ +N+ T++D + + + DS+ F+ +
Sbjct: 7 ITKKDLLEKYS---SKISILKEYAQMIYDQNQVMNITGFKTLDDIFEQGILDSILAFENY 63
Query: 70 PYPSIWI-------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
D+G+G GFP I I L + + +IES+ K+ +FL V +
Sbjct: 64 MMHYDENLENKKILDVGAGAGFPSIPILIALDNK--FNLTIIESQKKRCNFLEKVKARFN 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++E ++ ++I+ARA+A + L + L +
Sbjct: 122 LSVNIINSRVEEFFKLTNYFEIITARAVASIKVLYLSAAHLLKNR 166
>gi|225873766|ref|YP_002755225.1| methyltransferase GidB [Acidobacterium capsulatum ATCC 51196]
gi|225791675|gb|ACO31765.1| methyltransferase GidB [Acidobacterium capsulatum ATCC 51196]
Length = 219
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
VS E+L F L LKW+ + NL + E RH DS+ + P + +D G
Sbjct: 24 VSGAEAERLGAFLALLLKWNARTNLTAIREPEQMVRRHFADSVFCARNLPEGTKTLLDFG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPGI ++ V L ES+ +KASFLR V+ R +V+A R++E P
Sbjct: 84 SGGGFPGIPVALLRPE---VSVTLAESQGRKASFLREAVRSLGLRAEVWAERVEEMPVGR 140
Query: 140 TTCDVISARALADL 153
D ++ RA+ +
Sbjct: 141 -CFDCVTLRAVDRM 153
>gi|225155702|ref|ZP_03724190.1| glucose-inhibited division protein B [Opitutaceae bacterium TAV2]
gi|224803496|gb|EEG21731.1| glucose-inhibited division protein B [Opitutaceae bacterium TAV2]
Length = 221
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 7/147 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDL 78
V+ + L L +W+ KINLVS +E+ H + + + +D+
Sbjct: 11 VTPAQWDLLIRMSALHREWNAKINLVSRKDIENLEWHHYAPCIAAVKLLRLEAGATLLDV 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPG+I + L +S KK + + + ++ R R +
Sbjct: 71 GTGGGFPGLILAALYP---QAHFTLADSVGKKITVVADIARRLGLRN--VEARNVRVEIL 125
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ RA+ L ++ P +
Sbjct: 126 NRSYDFVTGRAVTSLPGFVQLVKPRVR 152
>gi|188996632|ref|YP_001930883.1| methyltransferase GidB [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931699|gb|ACD66329.1| methyltransferase GidB [Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 11/167 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ N ++ +E + + + LKW+K NL S ++ I+H DSL +
Sbjct: 1 MMKLLKDLAEKNGIILTDNQIELFDKYISMLLKWNKVYNLTSVRKKDEIVIKHFLDSLTL 60
Query: 66 FQ------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ ++ D G+G GFPG+ I + LIES NKK FL + +
Sbjct: 61 VKLFEAKAINVEDKEIADFGTGAGFPGVPLKIYYQDK--IKLYLIESINKKCIFLEMLKK 118
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V A + D++ +RA + +L+ L +
Sbjct: 119 ELKIDYTVLCD---RAENIDKKFDIVVSRATGETFEVLKIGKNLLKE 162
>gi|33598995|ref|NP_886555.1| glucose inhibited division protein B [Bordetella bronchiseptica
RB50]
gi|55976493|sp|Q7WRF0|RSMG_BORBR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33575041|emb|CAE30504.1| glucose inhibited division protein B [Bordetella bronchiseptica
RB50]
Length = 210
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 17/143 (11%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
+KL + +W++ NL + ++H+ DSL V G
Sbjct: 30 QQQKLLRYIEQMQRWNRTYNLTAIRDPGQMLVQHLFDSLSVVAPLER-----------GL 78
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCD 143
PG++ +I + + V +++ KK +F+R + + RI++ CD
Sbjct: 79 PGVVLAIMRAHWD---VTCVDAVEKKTAFVRQMAGALGLPNLQAAHTRIEQLEP--AQCD 133
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
V+ +RA A L + + + +
Sbjct: 134 VVISRAFASLQDFAKLAGRHVRE 156
>gi|331007813|ref|ZP_08330918.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC1989]
gi|330418380|gb|EGG92941.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC1989]
Length = 225
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 15/167 (8%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS------- 62
LR +S + ++ L + F+KW+K NL + +H+ DS
Sbjct: 11 LRDGVAKMNIVISDKKIQLLMAYLSEFVKWNKAYNLSAIRDPLVMVEKHLLDSLVLVPFL 70
Query: 63 -----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ + P ID+G+GGG PGI +I I+ L++S KK FL V
Sbjct: 71 EKEIKKNIDKQQPLIERIIDVGTGGGLPGIPLAIIFPEID---FTLLDSNGKKTRFLFQV 127
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ A + E+ Q ++ +RA A L ++ S L
Sbjct: 128 KTQLALKNVTIENTRVESYQPEKCFSIVMSRAFASLQDMVVGSGHLL 174
>gi|328905778|gb|EGG25554.1| 16S rRNA methyltransferase GidB [Propionibacterium sp. P08]
Length = 210
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + L+ + W RHV +S + L P D+GSG
Sbjct: 15 RDNYKSIRRYIDILASRGMDWGLIGPREIGKLWERHVLNSAALENLIPEGCRVADVGSGA 74
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
G PGI +I +E LIE +++ FL V++ +V A
Sbjct: 75 GLPGIPLAILRPDLEM---TLIEPMLRRSDFLNETVEELGLDDRV-TVVRSRAENAGLDV 130
Query: 143 DVISARALADLDTLLEYSF 161
D++ +RA+A L TL+E++
Sbjct: 131 DIVVSRAVAKLATLIEWTA 149
>gi|313835184|gb|EFS72898.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL037PA2]
gi|314929156|gb|EFS92987.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL044PA1]
gi|314970894|gb|EFT14992.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL037PA3]
Length = 223
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + L+ + W RHV +S + L P D+GSG
Sbjct: 28 RDNYKSIRRYIDILASRGMDWGLIGPREIGKLWERHVLNSAALENLIPEGCRVADVGSGA 87
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
G PGI +I +E LIE +++ FL V++ +V A
Sbjct: 88 GLPGIPLAILRPDLEM---TLIEPMLRRSDFLNETVEELGLDDRV-TVVRSRAENAGLDV 143
Query: 143 DVISARALADLDTLLEYSF 161
D++ +RA+A L TL+E++
Sbjct: 144 DIVVSRAVAKLATLIEWTA 162
>gi|88705407|ref|ZP_01103118.1| Glucose inhibited division protein [Congregibacter litoralis KT71]
gi|88700497|gb|EAQ97605.1| Glucose inhibited division protein [Congregibacter litoralis KT71]
Length = 211
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W+K NL + +H+ DSL V H +ID+G+G G PGI +I L
Sbjct: 33 RWNKAYNLTAIRDEAVMVTKHLLDSLAV-LPHLRGQRFIDVGTGAGLPGIPLAIALPDK- 90
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+L++S KK FL + + + D + +RA A LD ++
Sbjct: 91 --HFSLLDSNGKKTRFLTHAANELSLDNVEIVKSRVADFVPGERYDAVLSRAFASLDAMI 148
Query: 158 EYSFPWL 164
L
Sbjct: 149 SGCEHLL 155
>gi|118620074|ref|YP_908406.1| glucose-inhibited division protein B Gid [Mycobacterium ulcerans
Agy99]
gi|193806449|sp|A0PX66|RSMG_MYCUA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118572184|gb|ABL06935.1| glucose-inhibited division protein B Gid [Mycobacterium ulcerans
Agy99]
Length = 170
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE + + + L+ V+ W RHV +S + +L + +D+GSG G P
Sbjct: 17 LELAQCYADWLGTAGVERGLLGPREVDRLWERHVLNSAVIGELLDHGERVVDIGSGAGLP 76
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCD 143
+ +I ++ V L+E ++ FL+ VV +V R +E + + D
Sbjct: 77 ALPLAIARHDLQ---VVLLEPMLRRVEFLQEVVTDLGLAVEVVRGRAEERSVRERLGGSD 133
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
+RA+A LD L ++S P L ++
Sbjct: 134 AAVSRAVAALDKLAKWSMPLLKRE 157
>gi|298372526|ref|ZP_06982516.1| 16S rRNA methyltransferase GidB [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275430|gb|EFI16981.1| 16S rRNA methyltransferase GidB [Bacteroidetes oral taxon 274 str.
F0058]
Length = 206
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 8/159 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLH 69
+ + +++ + + L+ W+ KIN++S +E+ ++ HV SL +
Sbjct: 2 KDIKKYFTHLTEQQTVMFAALFDLYADWNAKINVISRKDIENLYLHHVLHSLAIAKIIDF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ ID+G+GGGFPGI +I L++S KK V FA
Sbjct: 62 RPGTNIIDVGTGGGFPGIPLAIMFPECRFC---LLDSVGKKIKVASEVASALGLANCTFA 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ E + +RA+ L L++ S + +++
Sbjct: 119 HKRME--DERGLFEFAVSRAVMPLSDLVKVSRKNISKEQ 155
>gi|257124928|ref|YP_003163042.1| methyltransferase GidB [Leptotrichia buccalis C-1013-b]
gi|257048867|gb|ACV38051.1| methyltransferase GidB [Leptotrichia buccalis C-1013-b]
Length = 240
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 11/161 (6%)
Query: 13 NYLLNTYNVSR-----ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VF 66
Y LN + S E + ++ F L ++ +NL + + +H DSL
Sbjct: 12 EYFLNLLSKSEIKMPNEKITQMLKFLELLYNKNQIMNLTAIRDKKGMLEKHFIDSLLLTK 71
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
++ +ID+G+G GFPG++ +I + L++S KK F+ V+++ +
Sbjct: 72 VINDDEKSFIDVGTGAGFPGLVLAIYYPEKK---YLLVDSVRKKIEFINEVIKELNLQNV 128
Query: 127 V--FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
F + + DV R +A+L +LEY P++
Sbjct: 129 TTSFERSEELIKDKRESFDVALCRGVANLRIILEYMIPFIK 169
>gi|212703470|ref|ZP_03311598.1| hypothetical protein DESPIG_01514 [Desulfovibrio piger ATCC 29098]
gi|212673084|gb|EEB33567.1| hypothetical protein DESPIG_01514 [Desulfovibrio piger ATCC 29098]
Length = 222
Score = 79.3 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-----PYPSIW 75
V L L + L +W+K +NLV + D R V DS + P +
Sbjct: 26 VPEAALPGLAEYLQLLCRWNKAMNLVGAHHWRDAMQRLVADSFHLATFLDGLPLPEDPLC 85
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
DLGSG G P I + + + G L+E++ K+A FL V+ + G VF R++
Sbjct: 86 WDLGSGAGLPAIPLRM---AWQRGTCWLVEAREKRALFLSTVLARVPLPGTHVFRGRVEH 142
Query: 135 A-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P+ D I++RA LLE P L
Sbjct: 143 FFPKQARKADCITSRAFMPWPQLLELVAPHLAD 175
>gi|260495538|ref|ZP_05815663.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
gi|260196880|gb|EEW94402.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
Length = 232
Score = 79.3 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 12 ANYL---LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
NY L VS + +EK + + L ++ NL + + +H DSL +
Sbjct: 2 KNYFKEGLEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQ 61
Query: 67 QLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
L ID+G+G GFPG++ +I + + L++S KK FL V +
Sbjct: 62 NLLKDEDKTLIDIGTGAGFPGMMLAIFNGNKK---FTLLDSVRKKTDFLELVKTELNLKN 118
Query: 125 GKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R +E DV R +++L +LEY P+L
Sbjct: 119 VEIINGRAEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|312136218|ref|YP_004003556.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
gi|311776269|gb|ADQ05756.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
Length = 238
Score = 79.3 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 14/169 (8%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ IL + N V + + L LK +K NL + E F I+H+ DSL
Sbjct: 3 LLDRILEYYRVKNPLVV----KQLFLKYMNLVLKKNKLFNLTAIEDEEGFVIKHIADSLS 58
Query: 65 VFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ + + ID+GSG G PG++ I SI L + K + +
Sbjct: 59 LLKFIEEEDSGKNPVAIDIGSGFGVPGLVLKIAKPSITVFLNDSNRKKCNFMMEAKESLG 118
Query: 120 KTAARGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+V R + + D ARA+ L+ L EY+ P L
Sbjct: 119 IAG--VEVICDRAENLGRKEVFRERFDFAFARAVDKLNVLCEYAIPLLK 165
>gi|298530547|ref|ZP_07017949.1| methyltransferase GidB [Desulfonatronospira thiodismutans ASO3-1]
gi|298509921|gb|EFI33825.1| methyltransferase GidB [Desulfonatronospira thiodismutans ASO3-1]
Length = 212
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 5/161 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
LR + ++ + ++ L+ + KW++ +NLV S + V DSL +
Sbjct: 4 EELREETAALGFELNPQQVQGLQAYLSTLEKWNRSVNLVGPSHWREILHSLVVDSLYLSG 63
Query: 68 LHPYPSIWIDLGS---GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+ S G G G+ + G L+ES+ K+ +F+R + +
Sbjct: 64 FLSRIAHQEDIRSLDLGAG-AGLPGLPLRLLWDKGSYYLVESRFKRCAFMRQAISAMGIQ 122
Query: 125 GK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V R+++ P+ I D+I +RA LL + L
Sbjct: 123 NTYVINGRVEDLPRDILPADLIVSRAFMPWKKLLALTVSML 163
>gi|225851139|ref|YP_002731373.1| 16S rRNA methyltransferase GidB [Persephonella marina EX-H1]
gi|225645613|gb|ACO03799.1| 16S rRNA methyltransferase GidB [Persephonella marina EX-H1]
Length = 208
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 11/166 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L+ N +S + L+K E + + KW++ NL S E+ +H DSL +
Sbjct: 1 MIEKLKDLCEKNGIFLSDDQLKKFEIYLNMLSKWNRVYNLTSVRRKEEIITKHFFDSLTL 60
Query: 66 FQLHPYPSIWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+L I + DLG+G GFPG+ I + LIES KK FL + +
Sbjct: 61 VKLFEKEGINVEGKKVADLGAGAGFPGVPVKIYYGEK--IDLYLIESVGKKCIFLEMLKK 118
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + KV R +E D++ +RA + ++ + L
Sbjct: 119 EISVDYKVICKRSEEVE---ERFDIVLSRATGETFDVMRWGKDILK 161
>gi|239930181|ref|ZP_04687134.1| glucose-inhibited division protein B [Streptomyces ghanaensis ATCC
14672]
gi|291438523|ref|ZP_06577913.1| conserved hypothetical GidB-family protein [Streptomyces ghanaensis
ATCC 14672]
gi|291341418|gb|EFE68374.1| conserved hypothetical GidB-family protein [Streptomyces ghanaensis
ATCC 14672]
Length = 239
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTTFLTEVVELLGLDHVTVARGRAEEVMGKLPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|15611430|ref|NP_223081.1| 16S rRNA methyltransferase GidB [Helicobacter pylori J99]
gi|7387704|sp|Q9ZM61|RSMG_HELPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|4154892|gb|AAD05942.1| GLUCOSE INHIBITED DIVISION PROTEIN B [Helicobacter pylori J99]
Length = 178
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + E Q + D+I++R
Sbjct: 64 LALEKPEAQ---FILLEPRVKRAAFLNYLKSVLPLNNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|148269368|ref|YP_001243828.1| methyltransferase GidB [Thermotoga petrophila RKU-1]
gi|166224627|sp|A5IJ79|RSMG_THEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147734912|gb|ABQ46252.1| methyltransferase GidB [Thermotoga petrophila RKU-1]
Length = 228
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+S+ N LL +EK++ + L NL + ++ ++V + L
Sbjct: 1 MDSV--KNILLEYGLRFQEPQIEKVDKYIEELL--GVPYNLTAHRDLDSAVHKNVVEILL 56
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ ++ +D+GSG G PG+I +I S ++ V L++S+ K +FLR V++K
Sbjct: 57 PLKEELKGTL-LDVGSGNGVPGLILAIFFSKLK---VVLLDSREKSVNFLRGVIEKLDLE 112
Query: 124 RGKVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
V R + + D ++ARA+A L+ L+E P L
Sbjct: 113 NVSVVKERAENFSKERREEFDYVTARAVARLNVLVEICTPALK 155
>gi|29336750|sp|Q8GHA0|RSMG_HELBI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|27462195|gb|AAO15371.1| GidB [Helicobacter bizzozeronii]
Length = 179
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL+ F L L+W NL + +D +++DSL+V +D+GSG GFP I
Sbjct: 4 KLDLFTHLLLEWGSVHNLSGAKNHQDI-EHNIQDSLQVLDFIAPFKSCLDIGSGAGFPAI 62
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
S+ S+ L+E KK +FL +V ++ RI+ D+I+
Sbjct: 63 PLSLACSNAR---FILLEPNAKKVAFLHHVKLALNLNNLEIQRMRIEHVSPQSVLVDLIT 119
Query: 147 ARALADLDTLLEYSFPWLYQK 167
+RAL + L+ S P+L ++
Sbjct: 120 SRALMNAQNLIALSAPFLREQ 140
>gi|15643470|ref|NP_228516.1| glucose-inhibited division protein B [Thermotoga maritima MSB8]
gi|7387702|sp|Q9WZG6|RSMG_THEMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|4981231|gb|AAD35789.1|AE001742_4 glucose-inhibited division protein B [Thermotoga maritima MSB8]
Length = 238
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 12 ANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
N LL +EK++ + L NL + ++ ++V + L +
Sbjct: 15 KNILLEYGLRFQEPQIEKVDKYIEELL--GVPYNLTAHRDLDSAVHKNVVEILLPLKEEL 72
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
++ +D+GSG G PG+I +I S ++ V L++S+ K +FLR V++K V
Sbjct: 73 KGTL-LDVGSGNGVPGLILAIFFSKLK---VVLLDSREKSVNFLRGVIEKLDLENVSVVK 128
Query: 130 CRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
R + + D ++ARA+A L+ L+E P L
Sbjct: 129 ERAENFSKERREEFDYVTARAVARLNVLVEICTPALK 165
>gi|224372585|ref|YP_002606957.1| 16S rRNA methyltransferase GidB [Nautilia profundicola AmH]
gi|223589948|gb|ACM93684.1| methyltransferase GidB [Nautilia profundicola AmH]
Length = 175
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+ K + F LKW+K + T E+ + +EDSL + + +D+G+G GFP
Sbjct: 1 MNKFDIFTNELLKWNKVHKFTNYKTPEEIREQ-IEDSLYPLEKIKHYKTALDIGTGAGFP 59
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G++ +I + + LV ++ + ++++ ++ K+ R++ I ++I
Sbjct: 60 GLVLAIAMPETKWYLVEPLKKRYSFLNYMK--IKLNLDNVKIVPSRLE--KADIDPVELI 115
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+ RA+ ++E S P+L +
Sbjct: 116 TTRAVMPTSKIIEISRPYLEK 136
>gi|260890746|ref|ZP_05902009.1| 16S rRNA methyltransferase GidB [Leptotrichia hofstadii F0254]
gi|260859299|gb|EEX73799.1| 16S rRNA methyltransferase GidB [Leptotrichia hofstadii F0254]
Length = 240
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSI 74
+ V E + ++ F L ++ +NL + + +H DS L ++
Sbjct: 20 KSEIKVPDEKITQMLKFLELLYNKNQIMNLTAIREKKGMLEKHFIDSLLLTKVINDDEKS 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRI 132
+ID+G+G GFPG++ +I + L++S KK F+ V+++ + F
Sbjct: 80 FIDVGTGAGFPGLVLAIYYPEKK---FLLVDSVRKKIEFINEVIKELNLQNVTTSFERAE 136
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ DV R +A+L +LEY P++
Sbjct: 137 ELIKDRRECFDVALCRGVANLRIILEYMIPFIK 169
>gi|291547595|emb|CBL20703.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus sp. SR1/5]
Length = 200
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 9/129 (6%)
Query: 43 INLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + ++ ++H D +D+G+G GFPG+ I +E
Sbjct: 1 MNLTGITEFDEVLVKHFLDSLCCVKAVDMGKIKTVMDIGTGAGFPGVPLKIAFPEVEAC- 59
Query: 101 VNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTL 156
L++S NK+ FL G R +E D+ +RA++ L TL
Sbjct: 60 --LLDSLNKRVKFLEETFALLGLEGISAIHGRAEEYAKNKAYREKYDLCVSRAVSGLATL 117
Query: 157 LEYSFPWLY 165
EY P++
Sbjct: 118 SEYCLPYVK 126
>gi|152978018|ref|YP_001343647.1| glucose-inhibited division protein B [Actinobacillus succinogenes
130Z]
gi|171472939|sp|A6VL65|RSMG_ACTSZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150839741|gb|ABR73712.1| methyltransferase GidB [Actinobacillus succinogenes 130Z]
Length = 211
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S ++ ++H+ DS V + +ID+G+G G PG+ +I +
Sbjct: 41 KWNKAYNLTSVRDPQEMLVKHILDS-LVVSPYLRGERFIDVGTGPGLPGLPLAIINPDKK 99
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S K+ SF+R V++ E D + +RA A L +
Sbjct: 100 ---FVLLDSLGKRMSFIRNAVRELELTNVEPVLSRVEEYIPDHKFDGVLSRAFASLKDMT 156
Query: 158 EYSFPW 163
++
Sbjct: 157 DWCSHL 162
>gi|126438347|ref|YP_001074038.1| 16S rRNA methyltransferase GidB [Mycobacterium sp. JLS]
gi|189045864|sp|A3Q8S0|RSMG_MYCSJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126238147|gb|ABO01548.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. JLS]
Length = 225
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ + W RH+ +S + +L D+GSG G PGI
Sbjct: 22 QRYAEFLATAGVERGLIGPRETDRIWDRHILNSAALGELVESGDRIADIGSGAGLPGIPL 81
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
++ V LIE ++ FL VV V R ++ + + DV+++
Sbjct: 82 ALARPD---VHVTLIEPMQRRCEFLTEVVDALGVAVIVVRGRAEDPAVRREVGEMDVVTS 138
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+ LD L +S L +
Sbjct: 139 RAVGSLDKLATWSMGILRE 157
>gi|304383179|ref|ZP_07365652.1| 16S rRNA methyltransferase GidB [Prevotella marshii DSM 16973]
gi|304335650|gb|EFM01907.1| 16S rRNA methyltransferase GidB [Prevotella marshii DSM 16973]
Length = 208
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+ LL + ++ E+ L+ +W+ KIN++S +++ + H+ SL + +
Sbjct: 1 MAMEVLLRYFPTLTDRQQEQFAALGSLYPEWNAKINVISRKDIDNLYEHHILHSLAIAKA 60
Query: 68 -LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +DLG+GGGFPGI +I L++ K + A+ + + T +
Sbjct: 61 VMFRAGTSVLDLGTGGGFPGIPLAILFPDSRFRLIDGTGKKIRVAAEIASAIGLT--NVE 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEY 159
R +E + + +RA+ L L+
Sbjct: 119 AVQRRGEEERERFEF---VVSRAVMPLPDLVRL 148
>gi|300314066|ref|YP_003778158.1| methyltransferase GidB [Herbaspirillum seropedicae SmR1]
gi|300076851|gb|ADJ66250.1| methyltransferase GidB (glucose inhibited division protein B)
protein [Herbaspirillum seropedicae SmR1]
Length = 139
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ +S L+KL + L KW+K NL + H+ DSL
Sbjct: 14 LKEGATAMGLTLSDAQLDKLMAYQALLAKWNKVYNLTALRDPAQMVTHHLLDSLSAVSAF 73
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIE-GGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
+D+G+GGG PGI+ +I + + + L+++ KK +FL V + V
Sbjct: 74 TGAQRVLDVGAGGGLPGIVLAIWAAQAQPQMKITLVDTVQKKTAFLNQVKAQLQLGNVTV 133
Query: 128 FACRIQ 133
R++
Sbjct: 134 VHARVE 139
>gi|237743016|ref|ZP_04573497.1| glucose inhibited division protein B [Fusobacterium sp. 7_1]
gi|229433576|gb|EEO43788.1| glucose inhibited division protein B [Fusobacterium sp. 7_1]
Length = 232
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 12 ANYL---LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
NY L VS + +EK + + L ++ NL + + +H DSL +
Sbjct: 2 KNYFKEGLEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQ 61
Query: 67 QLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
L ID+G+G GFPG++ +I + + L++S KK FL V +
Sbjct: 62 NLLKDEDKTLIDIGTGAGFPGMMLAIFNGNKK---FTLLDSVRKKTDFLELVKTELNLKN 118
Query: 125 GKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R +E DV R +++L +LEY P+L
Sbjct: 119 VEIINGRAEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|332672288|ref|YP_004455296.1| methyltransferase GidB [Cellulomonas fimi ATCC 484]
gi|332341326|gb|AEE47909.1| methyltransferase GidB [Cellulomonas fimi ATCC 484]
Length = 223
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 3/134 (2%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F+ + LV V W RH+ +S P +DLGSG G PG++ +
Sbjct: 34 FHAMLTDEGVLRGLVGPREVSRLWARHLLNSAAAVPFLPETGRIVDLGSGAGLPGVVIAA 93
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
S E V L+E ++ +LR V + + V E D ++ARA+A
Sbjct: 94 MRPSCE---VVLLEPMERRTDWLREVADRLSLDNVVVERARAEEVHGRLVADAVTARAVA 150
Query: 152 DLDTLLEYSFPWLY 165
LD L + P L
Sbjct: 151 ALDKLYRLALPLLR 164
>gi|220914664|ref|YP_002489973.1| 16S rRNA methyltransferase GidB [Arthrobacter chlorophenolicus A6]
gi|254766876|sp|B8H8Y9|RSMG_ARTCA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219861542|gb|ACL41884.1| methyltransferase GidB [Arthrobacter chlorophenolicus A6]
Length = 216
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+ + + + L+ + W RHV + + P S D+GSG G P
Sbjct: 20 LDLAKRYVEHLATSGTERGLIGPREIPRLWSRHVLNCAVIESEIPQGSRVADVGSGAGLP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G+ +I +E + LIE ++ +L+ VV E DV+
Sbjct: 80 GLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLDNVTVMRSRAELAVGHVEADVV 136
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA++ L L + P L
Sbjct: 137 TARAVSALTNLAGLTIPLL 155
>gi|254779074|ref|YP_003057179.1| 16S rRNA methyltransferase GidB [Helicobacter pylori B38]
gi|254000985|emb|CAX28929.1| Glucose-inhibited division protein [Helicobacter pylori B38]
Length = 178
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPETQ---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|294102832|ref|YP_003554690.1| methyltransferase GidB [Aminobacterium colombiense DSM 12261]
gi|293617812|gb|ADE57966.1| methyltransferase GidB [Aminobacterium colombiense DSM 12261]
Length = 229
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
+ LE + + +S ++ L E W H+ D L L P ID+G+GG
Sbjct: 15 EHNRKALETYIDGLVSFSGRVRLTGPQDRETLWSEHILDCLYSVPLLPQEGDIIDVGTGG 74
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP-QMIT 140
G PG++ +I + + L++S KK L + + R +E
Sbjct: 75 GLPGMVWAICRPDL---HITLLDSVKKKCVALEELSGLLHLKNVTIICSRAEEFALSRRE 131
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T + ARA+ LLEY P++ Q
Sbjct: 132 TFSLAGARAVKGAGVLLEYLSPFVAQ 157
>gi|281411935|ref|YP_003346014.1| methyltransferase GidB [Thermotoga naphthophila RKU-10]
gi|281373038|gb|ADA66600.1| methyltransferase GidB [Thermotoga naphthophila RKU-10]
Length = 228
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+S+ N LL +EK++ + L NL + ++ ++V + L
Sbjct: 1 MDSV--KNILLEYGLRFQEPQIEKVDKYIEELL--GVPYNLTAHRDLDSAVHKNVVEILL 56
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ ++ +D+GSG G PG+I +I S ++ V L++S+ K +FLR V++K
Sbjct: 57 PLKEELKGTL-LDVGSGNGVPGLILAIFFSKLK---VVLLDSREKSVNFLRGVIEKLDLE 112
Query: 124 RGKVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
V R + + D ++ARA+A L+ L+E P L
Sbjct: 113 NVSVVKERAENFSRERREEFDYVTARAVARLNVLVEICTPALK 155
>gi|325970665|ref|YP_004246856.1| ribosomal RNA small subunit methyltransferase G [Spirochaeta sp.
Buddy]
gi|324025903|gb|ADY12662.1| Ribosomal RNA small subunit methyltransferase G [Spirochaeta sp.
Buddy]
Length = 219
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF------QLHPY 71
+ ++ + ++L+ + F ++ LV++S ED IRH+ DSL
Sbjct: 17 SLHLDQGQRDQLDAYIAEFELFNPVYKLVAAS-GEDLVIRHILDSLSGAPTLASLCATFA 75
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--VQKTAARGKVFA 129
D GSG G PGI +I L S L+E ++ FLR R +V
Sbjct: 76 SCRIADFGSGAGLPGIPLAIALPS---YSFTLVERMGRRVDFLRNALLRASLQDRVRVID 132
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
++E DVI+ RA L +L+ P L
Sbjct: 133 KDLKEVKD---QFDVITFRAFHPLADILDLVAPLL 164
>gi|291288766|ref|YP_003505582.1| methyltransferase GidB [Denitrovibrio acetiphilus DSM 12809]
gi|290885926|gb|ADD69626.1| methyltransferase GidB [Denitrovibrio acetiphilus DSM 12809]
Length = 205
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--P 72
+ + + + E LE++E FY + + + +NL + + F+ +HV DS +F +
Sbjct: 2 IKSYFEFTDEMLERIEKFYDMHI--NATLNLTAIKDKDSFYTKHVLDSFLLFTEKKHLLK 59
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+GGGFPG+I ++ + L++S KK FL V++ +V R
Sbjct: 60 GKIGDIGTGGGFPGVILAVMYPELN---FTLVDSVAKKCRFLEDAVKELGLTNVEVITSR 116
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ I +R +A ++ +++Y+ +
Sbjct: 117 SEDIKN--RKFSTILSRGVAKVEQMIKYTMNLADK 149
>gi|296284829|ref|ZP_06862827.1| glucose inhibited division protein B [Citromicrobium bathyomarinum
JL354]
Length = 213
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLG 79
S KLE F ++ NL+S ST++ W RHV DS ++ P W+D+G
Sbjct: 18 SDAAFAKLEQFVAELRIEAEHQNLISRSTIDSVWQRHVADSAQLLDHVPRETPGTWLDIG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G GFPGI+T+I + L E + K+ ++L +V A E +
Sbjct: 78 TGAGFPGIVTAIMRPDLP---HVLCEPRAKRVTWLERMVTLAKLGNCRVAGSRVEKVETF 134
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
DVISARA A L L+ S +
Sbjct: 135 A-ADVISARACASLKDLISLSARF 157
>gi|237756366|ref|ZP_04584914.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691480|gb|EEP60540.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 200
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 11/167 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ N ++ LE + + + LKW+K NL S ++ I+H DSL +
Sbjct: 1 MMELLKDLAEKNGIILTGNQLELFDKYLSMLLKWNKVYNLTSVRKKDEIVIKHFLDSLTL 60
Query: 66 FQLHP------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+L D G+GGGFPG+ I + LIES NKK FL + +
Sbjct: 61 VKLFEAKGISVEDKEIADFGTGGGFPGVPLKIYYQDK--IKLYLIESINKKCIFLEMLKK 118
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V A + D++ +RA + +L+ L +
Sbjct: 119 ELKIDYTVLCD---RAENIDKKFDIVVSRATGETFEVLKIGKNLLKE 162
>gi|262204657|ref|YP_003275865.1| methyltransferase GidB [Gordonia bronchialis DSM 43247]
gi|262088004|gb|ACY23972.1| methyltransferase GidB [Gordonia bronchialis DSM 43247]
Length = 205
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ + + L+ V W RH+ + + ++ +D+GSG G PG+
Sbjct: 3 EVYHRILATDGIEHGLLGPREVPRLWDRHILNCAVIGEVIDDGESVVDIGSGAGLPGVAL 62
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI---TTCDVIS 146
+I ++ V L+E ++++FL V + E + CDV +
Sbjct: 63 AIARPDLD---VVLLEPLLRRSAFLERAVAELGLSSVTVVRGRAEEKSIRTAVGQCDVAT 119
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L L +S P +
Sbjct: 120 SRAVAPLQRLCTWSAPLIR 138
>gi|300728002|ref|ZP_07061380.1| methyltransferase GidB [Prevotella bryantii B14]
gi|299774844|gb|EFI71458.1| methyltransferase GidB [Prevotella bryantii B14]
Length = 189
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGGFPGI 87
E L+ W+ KIN++S +++ + HV SL + + + + +D G+GGGFPGI
Sbjct: 2 EQLDELYRDWNSKINVISRKDIDNLYEHHVLHSLAIAKYINFKSGTKVLDFGTGGGFPGI 61
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+I ++ L++ K + A+ + + + D + +
Sbjct: 62 PLAILFPEVKFRLIDGTGKKIRVATEVANAIGLKNVDAVHLRG-----EEEKGKYDFVVS 116
Query: 148 RALADLDTLLEY 159
RA+ L L++
Sbjct: 117 RAVMPLPDLMKI 128
>gi|21115310|gb|AAM43262.1| glucose inhibited division protein B [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 249
Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL Q + DLG+G G PGI
Sbjct: 68 LLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLA-MQPYIVSGTLADLGTGPGLPGIP 126
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A A EA D ++AR
Sbjct: 127 LAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEAVDEPAAYDHLTAR 183
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 184 ALDTLAGIIAVGGHLLRP 201
>gi|34763618|ref|ZP_00144549.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27886716|gb|EAA23858.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 232
Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDGD 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLTIFNEDKK---FTLLDSVRKKTDFLELVKNELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|108802367|ref|YP_642564.1| 16S rRNA methyltransferase GidB [Mycobacterium sp. MCS]
gi|119866060|ref|YP_936012.1| methyltransferase GidB [Mycobacterium sp. KMS]
gi|122976256|sp|Q1B0S6|RSMG_MYCSS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189045865|sp|A1U8R4|RSMG_MYCSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|108772786|gb|ABG11508.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. MCS]
gi|119692149|gb|ABL89222.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. KMS]
Length = 225
Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ + W RH+ +S + + D+GSG G PGI
Sbjct: 22 QRYAEFLATAGVERGLIGPRETDRIWDRHILNSAALGESVESGDRIADIGSGAGLPGIPL 81
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
++ V LIE ++ FL VV V R + + + DV+++
Sbjct: 82 ALARPD---VHVTLIEPMQRRCEFLTEVVDALGVAVIVVRGRAENPAVRREVGEMDVVTS 138
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+ LD L +S L +
Sbjct: 139 RAVGSLDKLATWSMGILRE 157
>gi|66770427|ref|YP_245189.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
campestris str. 8004]
gi|77747974|ref|NP_639380.2| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|23821585|sp|Q8P3N0|RSMG_XANCP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81303626|sp|Q4UP54|RSMG_XANC8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|66575759|gb|AAY51169.1| glucose inhibited division protein B [Xanthomonas campestris pv.
campestris str. 8004]
Length = 212
Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL Q + DLG+G G PGI
Sbjct: 31 LLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLA-MQPYIVSGTLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEAVDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|189040868|sp|B0RYS0|RSMG_XANCB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL Q + DLG+G G PGI
Sbjct: 31 LLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLA-MQPYIVSGTLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEAVDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|171920818|ref|ZP_02931995.1| methyltransferase GidB [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|185178850|ref|ZP_02964631.1| methyltransferase GidB [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188024382|ref|ZP_02997048.1| methyltransferase GidB [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188518462|ref|ZP_03003949.1| methyltransferase GidB [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|188524181|ref|ZP_03004245.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195867429|ref|ZP_03079433.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273257|ref|ZP_03205793.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209554410|ref|YP_002284457.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225550480|ref|ZP_03771429.1| methyltransferase GidB [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|225551429|ref|ZP_03772375.1| methyltransferase GidB [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|171903586|gb|EDT49875.1| methyltransferase GidB [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|184209486|gb|EDU06529.1| methyltransferase GidB [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188018650|gb|EDU56690.1| methyltransferase GidB [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188998134|gb|EDU67231.1| methyltransferase GidB [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|195659979|gb|EDX53359.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660905|gb|EDX54158.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249777|gb|EDY74557.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209541911|gb|ACI60140.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225379244|gb|EEH01609.1| methyltransferase GidB [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|225379634|gb|EEH01996.1| methyltransferase GidB [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 236
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
V +T E + + K+++ NL + + + DSL ++ + +
Sbjct: 17 VDEQTFISFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q+ + E
Sbjct: 77 IDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAED 133
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLY 165
M + DV ++RA+A LD +LE S ++
Sbjct: 134 LTQSMRESFDVATSRAVASLDKILEISAAFVK 165
>gi|188993632|ref|YP_001905642.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
campestris str. B100]
gi|167735392|emb|CAP53606.1| Methyltransferase GidB [Xanthomonas campestris pv. campestris]
Length = 314
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL Q + DLG+G G PGI
Sbjct: 133 LLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLA-MQPYIVSGTLADLGTGPGLPGIP 191
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A A EA D ++AR
Sbjct: 192 LAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEAVDEPAAYDHLTAR 248
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 249 ALDTLAGIIAVGGHLLRP 266
>gi|171920429|ref|ZP_02931744.1| methyltransferase GidB [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186701591|ref|ZP_02971303.1| methyltransferase GidB [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|171902876|gb|EDT49165.1| methyltransferase GidB [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186700819|gb|EDU19101.1| methyltransferase GidB [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 236
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 10 LRANYLLNTYN-----VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ N V +T E + + K+++ NL + + + DSL
Sbjct: 1 MTKKDFFNVLTKYFPWVDEQTFLLFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLA 60
Query: 65 VFQLHPYPSIW-----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
++ + + ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q
Sbjct: 61 PYKELDFFTQNTNLKLIDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQ 117
Query: 120 KTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + E M + DV ++RA+A LD +LE S ++
Sbjct: 118 ELGLNDVLIWNMRAEDLTQSMRESFDVATSRAVASLDKILEISAAFVK 165
>gi|256829386|ref|YP_003158114.1| glucose inhibited division protein [Desulfomicrobium baculatum DSM
4028]
gi|256578562|gb|ACU89698.1| glucose inhibited division protein [Desulfomicrobium baculatum DSM
4028]
Length = 214
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWI 76
++ + L + L +KW+ ++NLV +T + ++DS + L P P+ +
Sbjct: 21 LTDDQARLLSVYLGLLVKWNSRMNLVGPATWTEILDTLIQDSWHLADLLQTLAPQPAQTL 80
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
DLG+G G PGI + + G L+E + K+A F+ V R +V R++
Sbjct: 81 DLGAGAGLPGIPLRVF---WQQGDYYLVEPRQKRAIFMEQAVAHMKLPRTRVICARMEAL 137
Query: 136 PQMITTCDVISARALADLDTLL 157
P +I +RA LL
Sbjct: 138 PPARREAGLIVSRAFMPWQKLL 159
>gi|208434331|ref|YP_002265997.1| glucose-inhibited division protein B [Helicobacter pylori G27]
gi|208432260|gb|ACI27131.1| glucose-inhibited division protein B [Helicobacter pylori G27]
Length = 178
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|258655506|ref|YP_003204662.1| methyltransferase GidB [Nakamurella multipartita DSM 44233]
gi|258558731|gb|ACV81673.1| methyltransferase GidB [Nakamurella multipartita DSM 44233]
Length = 262
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
++ + L L+ + W RH+ + + L P+ + +D+GSG G
Sbjct: 41 QVQTARAYARLLATDGVIRGLIGPRETDRLWTRHLLNCAALTDLIPHGARLVDVGSGAGL 100
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCD 143
PG++ +I ++ V L+E ++ FL + + +V R Q+A D
Sbjct: 101 PGLVLAIARPDVQ---VILVEPLERRVRFLLEAIDRLELDNCEVVRSRAQDAGPSAGGAD 157
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
++ +RA+A L L + +
Sbjct: 158 LVVSRAVAPLGRLAGWCSGLVRP 180
>gi|87309120|ref|ZP_01091257.1| probable glucose inhibited division protein B (GidB)
[Blastopirellula marina DSM 3645]
gi|87288111|gb|EAQ80008.1| probable glucose inhibited division protein B (GidB)
[Blastopirellula marina DSM 3645]
Length = 228
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + + ++ +NL + + F R V DSL + +DLGSGGG PG+I
Sbjct: 37 LDKYAQIVWEMNQSLNLTRHTDYDKFVARDVLDSLALAGQLKPGDEILDLGSGGGVPGVI 96
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ L + + KA L +V + V+ R ++ + I R
Sbjct: 97 IAILRPDVQVSLCDSVTK---KAKALEEIVHRAGLSIPVYHARAEDLLEDF-RYHAIVCR 152
Query: 149 ALADLDTLLEYSFPW 163
A+A L LL + P
Sbjct: 153 AVAPLKKLLTWLAPH 167
>gi|317009030|gb|ADU79610.1| 16S rRNA methyltransferase GidB [Helicobacter pylori India7]
Length = 178
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|15645677|ref|NP_207854.1| 16S rRNA methyltransferase GidB [Helicobacter pylori 26695]
gi|3122146|sp|O25703|RSMG_HELPY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|2314206|gb|AAD08103.1| glucose-inhibited division protein (gidB) [Helicobacter pylori
26695]
Length = 178
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|90568008|gb|ABD94074.1| At5g50110 [Arabidopsis thaliana]
Length = 208
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-----------IDLGSGGGFPGIITSI 91
+NL ++ ++ RH+EDSL + ID+GSG G PG++ +I
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPIKTCYNLHSSDLFDHINLIDVGSGAGLPGLVLAI 60
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MITTCDVISA 147
V L+ES NK+ FL +VV T + R + DV A
Sbjct: 61 ACPDWR---VTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIA 117
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A++ L EY P +
Sbjct: 118 RAVAEMRVLAEYCLPLVR 135
>gi|315078980|gb|EFT50992.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL053PA2]
Length = 211
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 18 RDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E LIE ++++FL + + R V R ++A
Sbjct: 78 GLPGIPLAILRPDLEM---TLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDA---DL 131
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
DV+ +RA+A L TL+ ++ +
Sbjct: 132 RVDVVVSRAVAKLATLINWTADLI 155
>gi|313792580|gb|EFS40666.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA1]
gi|313803581|gb|EFS44763.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA2]
gi|313839609|gb|EFS77323.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL086PA1]
gi|314963887|gb|EFT07987.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL082PA1]
gi|327457427|gb|EGF04082.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL092PA1]
Length = 211
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 18 RDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E LIE ++++FL + + R V R ++A
Sbjct: 78 GLPGIPLAILRPDLEM---TLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDA---DL 131
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
DV+ +RA+A L TL+ ++ +
Sbjct: 132 RVDVVVSRAVAKLATLINWTADLI 155
>gi|254303503|ref|ZP_04970861.1| glucose-inhibited cell division protein B [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323695|gb|EDK88945.1| glucose-inhibited cell division protein B [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 232
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 12 ANYLLNTYN---VS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+Y + VS +EK + + L ++ NL + + +H DSL +
Sbjct: 2 KDYFKEGLDKIKVSYDENKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQ 61
Query: 67 QLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L ID+G+G GFPG++ +I + L++S KK FL V + A
Sbjct: 62 NLLKDEDKTLIDIGTGAGFPGMMLAIFNEDKK---FTLLDSVRKKTDFLELVKTELALNN 118
Query: 126 -KVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+V R +E DV R +++L +LEY P+L
Sbjct: 119 VEVINGRAEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|326386155|ref|ZP_08207779.1| methyltransferase GidB [Novosphingobium nitrogenifigens DSM 19370]
gi|326209380|gb|EGD60173.1| methyltransferase GidB [Novosphingobium nitrogenifigens DSM 19370]
Length = 252
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 6 SNSILRAN-----YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
N+++ +L+ T V +E+L + + +++ NLV+ ++++ W RH+
Sbjct: 1 MNALIADEAAAQAWLVETLGVDAAGMERLGRLVDMLREENERQNLVARASLDQVWQRHIV 60
Query: 61 DSLRVFQLHPYPS------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
DS ++ + S W+DLG+G GFPG++ + V L++S+ + +L
Sbjct: 61 DSAQLLSVSRGTSAGEGLGSWLDLGTGAGFPGLVIAALQPERP---VVLVDSRRLRTEWL 117
Query: 115 RYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R +V R+++ P + T VISARA A L+ LL + +
Sbjct: 118 ARAASTLGLDRVEVVLSRVEDLP--VGTHAVISARAFAPLERLLPLAARF 165
>gi|320353034|ref|YP_004194373.1| methyltransferase GidB [Desulfobulbus propionicus DSM 2032]
gi|320121536|gb|ADW17082.1| methyltransferase GidB [Desulfobulbus propionicus DSM 2032]
Length = 217
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVED-FWIRHVED--SLRVFQLHPYPSI 74
+ E +E+L + +KWS+++NL++ T E+ H D +L P
Sbjct: 17 GIPLGDEAIERLLIYLAQLMKWSRRVNLIARDTPEEQAVELHFLDSLTLAPLLQEPEAVH 76
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+D+G+G GFPG++ + L L+E + K+ SFLR++++ +V A R++
Sbjct: 77 LLDVGTGAGFPGLVLACVLPEAR---FTLVEPRQKRVSFLRHLIRTLGLSNTEVVADRLE 133
Query: 134 -EAPQMITTCDVISARALADLDTLLEYSFPW 163
A +++RA+A+ L P
Sbjct: 134 PHAQAWQGRFTHVTSRAVAEPGLFLPLVRPL 164
>gi|149194230|ref|ZP_01871327.1| Glucose inhibited division protein [Caminibacter mediatlanticus
TB-2]
gi|149135405|gb|EDM23884.1| Glucose inhibited division protein [Caminibacter mediatlanticus
TB-2]
Length = 176
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+ K E F LKW+K L + + E + +EDSL + ID+G+G GFP
Sbjct: 1 MNKFEIFTNELLKWNKTHKLTNYNEDE--IKKQIEDSLYPLEKIKDSKTAIDIGTGAGFP 58
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G+I +I + + + LV ++ + ++++ ++ +V R++ + D+I
Sbjct: 59 GLILAIAMPNTKWYLVEPLKKRYSFLNYIKTILN--LKNVEVIPNRVE--KANLPKVDLI 114
Query: 146 SARALADLDTLLEYSFPWLYQ 166
++RA+ + +L+ P+L +
Sbjct: 115 TSRAVMKTNDILKIIKPFLKK 135
>gi|313771079|gb|EFS37045.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL074PA1]
gi|313806843|gb|EFS45341.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL087PA2]
gi|313811756|gb|EFS49470.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL083PA1]
gi|313814234|gb|EFS51948.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL025PA1]
gi|313815712|gb|EFS53426.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL059PA1]
gi|313817631|gb|EFS55345.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL046PA2]
gi|313821544|gb|EFS59258.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL036PA1]
gi|313824513|gb|EFS62227.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL036PA2]
gi|313826857|gb|EFS64571.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL063PA1]
gi|313829175|gb|EFS66889.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL063PA2]
gi|313832290|gb|EFS70004.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL007PA1]
gi|313832750|gb|EFS70464.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL056PA1]
gi|314916200|gb|EFS80031.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA4]
gi|314917467|gb|EFS81298.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL050PA1]
gi|314921804|gb|EFS85635.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL050PA3]
gi|314926249|gb|EFS90080.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL036PA3]
gi|314930931|gb|EFS94762.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL067PA1]
gi|314955401|gb|EFS99806.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL027PA1]
gi|314959145|gb|EFT03247.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL002PA1]
gi|314961650|gb|EFT05751.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL002PA2]
gi|314969096|gb|EFT13194.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL037PA1]
gi|314975187|gb|EFT19282.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL053PA1]
gi|314977597|gb|EFT21692.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL045PA1]
gi|314979933|gb|EFT24027.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL072PA2]
gi|314985056|gb|EFT29148.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA1]
gi|314987125|gb|EFT31217.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA2]
gi|314990674|gb|EFT34765.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA3]
gi|315081510|gb|EFT53486.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL078PA1]
gi|315083066|gb|EFT55042.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL027PA2]
gi|315086601|gb|EFT58577.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL002PA3]
gi|315088003|gb|EFT59979.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL072PA1]
gi|315097176|gb|EFT69152.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL038PA1]
gi|315099355|gb|EFT71331.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL059PA2]
gi|315102304|gb|EFT74280.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL046PA1]
gi|315107401|gb|EFT79377.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL030PA1]
gi|315109696|gb|EFT81672.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL030PA2]
gi|327332488|gb|EGE74223.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL096PA2]
gi|327334112|gb|EGE75827.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL096PA3]
gi|327444482|gb|EGE91136.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL013PA2]
gi|327446735|gb|EGE93389.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL043PA2]
gi|327448823|gb|EGE95477.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL043PA1]
gi|327454240|gb|EGF00895.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL087PA3]
gi|327456299|gb|EGF02954.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL083PA2]
gi|328755997|gb|EGF69613.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL087PA1]
gi|328757988|gb|EGF71604.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL020PA1]
gi|328758962|gb|EGF72578.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL025PA2]
gi|328759885|gb|EGF73475.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL099PA1]
Length = 211
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 18 RDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E LIE ++++FL + + R V R ++A
Sbjct: 78 GLPGIPLAILRPDLEM---TLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDADLH-- 132
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
DV+ +RA+A L TL+ ++ +
Sbjct: 133 -VDVVVSRAVAKLATLINWTADLI 155
>gi|313765039|gb|EFS36403.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL013PA1]
Length = 211
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 18 RDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E LIE ++++FL + + R V R ++A
Sbjct: 78 GLPGIPLAILRPDLEM---TLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDADLH-- 132
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
DV+ +RA+A L TL+ ++ +
Sbjct: 133 -VDVVVSRAVAKLATLINWTADLI 155
>gi|297792303|ref|XP_002864036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309871|gb|EFH40295.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-----------IDLGSGGGFPGIITSI 91
+NL ++ ++ RH+EDSL + +D+GSG G PG++ +I
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPLKACYNLHSNDLFDHINLVDVGSGAGLPGLVLAI 60
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MITTCDVISA 147
V L+ES NK+ FL +VV T K+ R + DV A
Sbjct: 61 ACPDWR---VTLLESINKRCIFLEHVVNVTGLTNVKIVRGRAESCGHDVMYREKFDVAIA 117
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A++ L+EY P +
Sbjct: 118 RAVAEMRVLVEYCLPLVR 135
>gi|50843782|ref|YP_057009.1| glucose-inhibited division protein B [Propionibacterium acnes
KPA171202]
gi|289424162|ref|ZP_06425945.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK187]
gi|289427458|ref|ZP_06429171.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J165]
gi|295131872|ref|YP_003582535.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK137]
gi|55976373|sp|Q6A5B2|RSMG_PROAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50841384|gb|AAT84051.1| glucose inhibited division protein B [Propionibacterium acnes
KPA171202]
gi|289154859|gb|EFD03541.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK187]
gi|289159388|gb|EFD07579.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J165]
gi|291376738|gb|ADE00593.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK137]
gi|332676737|gb|AEE73553.1| ribosomal RNA small subunit methyltransferase G [Propionibacterium
acnes 266]
Length = 208
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 8/144 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 15 RDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 74
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E LIE ++++FL + + R V R ++A
Sbjct: 75 GLPGIPLAILRPDLEM---TLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDADLH-- 129
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
DV+ +RA+A L TL+ ++ +
Sbjct: 130 -VDVVVSRAVAKLATLINWTADLI 152
>gi|269118890|ref|YP_003307067.1| methyltransferase GidB [Sebaldella termitidis ATCC 33386]
gi|268612768|gb|ACZ07136.1| methyltransferase GidB [Sebaldella termitidis ATCC 33386]
Length = 231
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 6/163 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +E L + L + +K +NL + ++ +H DSL +
Sbjct: 1 MKDYFEQLLKKSNIKLDNSKVEILLKYLRLLTEKNKVMNLTAIRDEKEILEKHFIDSLLL 60
Query: 66 FQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+L + ID+G+G GFPG++ ++ + L++S KK SF+ +
Sbjct: 61 SELFLHTDKKIIDIGTGAGFPGLVLAVAFPEKD---FLLVDSVRKKISFIDEAAENLGLT 117
Query: 124 RGKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
K R ++ + ++ D+ R +A+L +LEY P L
Sbjct: 118 NVKTSYERAEDLVTKSRSSFDLGLCRGVANLRIILEYMIPLLK 160
>gi|330752161|emb|CBL87121.1| glucose-inhibited division protein B [uncultured Flavobacteria
bacterium]
Length = 207
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
++ + ++K+ L+ W+ +IN++S S ++ W H+ SL + L P +DL
Sbjct: 17 LTADAVDKINSLPSLYGFWNNQINVISRSDQDEIWKHHIIHSLVLGNLIPISKGLRVLDL 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPGI +I IE L++S KK + +V++ + A +
Sbjct: 77 GTGGGFPGIPLAIAFPEIE---FILVDSIGKKIKVVNAIVKELRLEN--VSAIHSRAESL 131
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ D+I RA+A ++ L+ + KK
Sbjct: 132 DDSFDIIITRAVASIEKLVSLTKNLFTDKK 161
>gi|217033323|ref|ZP_03438754.1| hypothetical protein HP9810_9g76 [Helicobacter pylori 98-10]
gi|216944264|gb|EEC23689.1| hypothetical protein HP9810_9g76 [Helicobacter pylori 98-10]
Length = 178
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQHFLKDK 139
>gi|308184186|ref|YP_003928319.1| 16S rRNA methyltransferase GidB [Helicobacter pylori SJM180]
gi|308060106|gb|ADO02002.1| 16S rRNA methyltransferase GidB [Helicobacter pylori SJM180]
Length = 178
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEAQ---FILLEPRVKRAAFLNYIKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|317151994|ref|YP_004120042.1| glucose inhibited division protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942245|gb|ADU61296.1| glucose inhibited division protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 221
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-----YPSIW 75
V L + +KW+ K+NLV S + V DSL + +
Sbjct: 22 VEDGQAASLTDYLSQLVKWNAKMNLVGPSDWRTIFDTLVVDSLYLADFLNGLDLGNAPLC 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
+DLG+G G PGI I + L+ES++K+A+F+R V + VF R ++
Sbjct: 82 LDLGAGAGLPGIPLRILWPHGDYW---LVESRDKRATFMRSAVGRLGLTATSVFHGRAED 138
Query: 135 APQMITT------CDVISARALADLDTLLEYSFPWLYQ 166
A + D+I +RA LL + P L
Sbjct: 139 ALDRLARHGQHATADLIVSRAFMPWPQLLPFVRPMLRP 176
>gi|237739896|ref|ZP_04570377.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
2_1_31]
gi|229423504|gb|EEO38551.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
2_1_31]
Length = 232
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKIEKALKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKEED 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I L++S KK FL V + A ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKN---FTLLDSVRKKTDFLELVKNELALNNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDKREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|330837280|ref|YP_004411921.1| Ribosomal RNA small subunit methyltransferase G [Spirochaeta
coccoides DSM 17374]
gi|329749183|gb|AEC02539.1| Ribosomal RNA small subunit methyltransferase G [Spirochaeta
coccoides DSM 17374]
Length = 227
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-- 68
R+ + +LE + W+ LV++ D IRH+ DSL +
Sbjct: 9 RSGIAELGLGFTENQHGQLEKYLSELTLWNPVYRLVNA-EGRDIVIRHLLDSLAAVPILR 67
Query: 69 ------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
D+GSG G PGI +I + + LIE ++A FL + +
Sbjct: 68 SLLDESPAGSREVCDVGSGPGLPGIPLAIAMPDVR---FTLIERMGRRADFLANALAACS 124
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G+V ++ ++ V++ RA L ++E L
Sbjct: 125 LDGRV-NVVQRDINEIRGKFPVVTFRAFHPLPDIIEPVSRLLDD 167
>gi|296167148|ref|ZP_06849555.1| methyltransferase GidB [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897470|gb|EFG77069.1| methyltransferase GidB [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 241
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+ + + + L+ VE W RH+ +S V +L ID+GSG G P
Sbjct: 33 LDLARRYAEMLAGPGVERGLLGPREVERIWDRHLLNSAAVAELLEPGDRVIDIGSGAGLP 92
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC--- 142
GI ++ ++ V L+E +++ FL V++ +V R ++ P +
Sbjct: 93 GIPLALARPDVD---VVLLEPLLRRSEFLSEAVEQLGLAVEVVRGRAED-PWVRDRFGER 148
Query: 143 DVISARALADLDTLLEYSFPWLY 165
D +RA+A LD L ++S P L
Sbjct: 149 DAAVSRAVASLDKLAKWSVPLLR 171
>gi|260654329|ref|ZP_05859819.1| 16S rRNA methyltransferase GidB [Jonquetella anthropi E3_33 E1]
gi|260630962|gb|EEX49156.1| 16S rRNA methyltransferase GidB [Jonquetella anthropi E3_33 E1]
Length = 212
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + + ++ L SS W HV D L + ID+G+GGG PG++
Sbjct: 2 LKEYLSQLCQANGRVRLTGSSDPTVLWQEHVTDCLYLASAVEGTEKIIDVGTGGGLPGVV 61
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMITTCDVIS 146
++ V L++S+ KKA L +V+ V + R +E A D
Sbjct: 62 LAVCFPK---SHVTLLDSQKKKAVQLGKIVEALELENVSVISARSEELAAARREEWDCAV 118
Query: 147 ARALADLDTLLEYSFPWLYQ 166
ARA+ + L EY P + Q
Sbjct: 119 ARAVCEAPVLAEYLSPLVRQ 138
>gi|296125941|ref|YP_003633193.1| methyltransferase GidB [Brachyspira murdochii DSM 12563]
gi|296017757|gb|ADG70994.1| methyltransferase GidB [Brachyspira murdochii DSM 12563]
Length = 202
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 9 ILRANYL--LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ N + + ++ E KL + L + ++K +N+ + T EDF+ H+ DSL
Sbjct: 1 MFDYNSISSITNMQITEENKNKLLKYANLVMDYNKNVNITGAKTTEDFFYDHIADSLLAL 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ ID+GSGGG P I +I ++ + L ESKNKK FLR ++
Sbjct: 61 NIFHDYDNIIDIGSGGGLPSIPLAIIYNNKK---FTLCESKNKKCEFLRLAKKELELNN- 116
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ A ++ D +++RA +D+ TL++
Sbjct: 117 -IEIKCINAYEIKEKYDTVTSRAFSDISTLIKI 148
>gi|319778789|ref|YP_004129702.1| Glucose inhibited division protein [Taylorella equigenitalis MCE9]
gi|317108813|gb|ADU91559.1| Glucose inhibited division protein [Taylorella equigenitalis MCE9]
Length = 223
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 63/165 (38%), Gaps = 13/165 (7%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L + +S +L + L LKW+K NL S D H+ D L +
Sbjct: 8 LLEDGLKDLSLKLSDIEKGQLIEYINLLLKWNKTYNLTSIKNELDALKLHILDCLSIINP 67
Query: 69 ----------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ +D+GSGGG P I+ +I + + V+ +E K + +
Sbjct: 68 LRDFLNNKEGNTQTKTVVDVGSGGGLPAIVLAIVMKNFSIYSVDAVEKKTAFVKAVASTL 127
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + + RI+ + D+ +RA A LD + P
Sbjct: 128 KLSNLKS--IHTRIENF-NIPEDIDIFISRAFASLDDYIGLVDPL 169
>gi|119358162|ref|YP_912806.1| 16S rRNA methyltransferase GidB [Chlorobium phaeobacteroides DSM
266]
gi|166224580|sp|A1BJ05|RSMG_CHLPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119355511|gb|ABL66382.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium phaeobacteroides
DSM 266]
Length = 222
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPS 73
+ +S EKL + L W+ KINL+S I+HV SL + F
Sbjct: 20 KDNIVLSLSQYEKLVGYALLLEDWNNKINLISRKEDAPILIKHVFHSLLIGLFHQFSSSE 79
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+DLG+GGG PGI +I + L+++ KK + + +++ + V R+
Sbjct: 80 KVLDLGTGGGLPGIPLAIAWPDTQ---FLLVDATGKKIAACQSMIKSLDIKNAVAVHSRV 136
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+E M + D + +R +A L+ L Y+ L
Sbjct: 137 EELKGM--SFDTVLSRQVAQLEQLCSYASKILKP 168
>gi|229816219|ref|ZP_04446529.1| hypothetical protein COLINT_03269 [Collinsella intestinalis DSM
13280]
gi|229808227|gb|EEP44019.1| hypothetical protein COLINT_03269 [Collinsella intestinalis DSM
13280]
Length = 257
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 7/152 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+ ET E+ + ++ +NL + D I H+ DSL +++ P
Sbjct: 36 DIELDSETAERCVQHLLYVNQVNQVMNLTRIKDIHDALILHIVDSLALYRDLPIDPEHFL 95
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+G+G GFPGI ++ G L++S KK + + + R +
Sbjct: 96 DMGTGAGFPGIPFALY----SGCSGVLLDSVGKKIDAVNAFIDALGIEDVEGIHDRCESY 151
Query: 136 P-QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+M D + ARA+ + ++EY P+L
Sbjct: 152 AMKMRGRFDTVFARAVGQMSMIIEYGTPFLED 183
>gi|327539004|gb|EGF25639.1| glucose inhibited division protein B (GidB) [Rhodopirellula baltica
WH47]
Length = 231
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + +++++INL +T + F R + D L++ QL +D+GSG G PGI
Sbjct: 25 LQQYAQSLWRYNEQINLTRHTTWDLFVTRDLRDCLQLAQLIQPGEEVLDMGSGNGVPGIP 84
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
++ I+ V L ES K+A L +V + V+A R ++ + I +R
Sbjct: 85 LAMLRPDID---VALAESVGKRAKVLDELVTELNLPVPVYAARGEDLLEDF-RFTTIVSR 140
Query: 149 ALADLDTLLEYSFPW 163
A+ L + P
Sbjct: 141 AVGSLLKFCRWVEPH 155
>gi|170762322|ref|YP_001752119.1| methyltransferase GidB [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|183508528|ref|ZP_02958052.1| methyltransferase GidB [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|189040729|sp|B1AI25|RSMG_UREP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168827899|gb|ACA33161.1| methyltransferase GidB [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|182675965|gb|EDT87870.1| methyltransferase GidB [Ureaplasma parvum serovar 14 str. ATCC
33697]
Length = 236
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
V +T E + + K+++ NL + + + DSL ++ + +
Sbjct: 17 VDEQTFMSFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q+ + E
Sbjct: 77 IDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAED 133
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLY 165
M + D+ ++RA+A LD +LE S ++
Sbjct: 134 LTQSMRESFDIATSRAVASLDKILEISAAFVK 165
>gi|32475118|ref|NP_868112.1| glucose inhibited division protein B (GidB) [Rhodopirellula baltica
SH 1]
gi|55976485|sp|Q7UMW0|RSMG_RHOBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|32445658|emb|CAD75664.1| probable glucose inhibited division protein B (GidB)
[Rhodopirellula baltica SH 1]
Length = 231
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + +++++INL +T + F R + D L++ QL +D+GSG G PGI
Sbjct: 25 LQQYAQSLWRYNEQINLTRHTTWDLFVTRDLRDCLQLAQLIQPGEEVLDMGSGNGVPGIP 84
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
++ I+ V L ES K+A L +V + V+A R ++ + I +R
Sbjct: 85 LAMLRPDID---VALAESVGKRAKVLDELVTELNLPVPVYAARGEDLLEDF-RFTTIVSR 140
Query: 149 ALADLDTLLEYSFPW 163
A+ L + P
Sbjct: 141 AVGSLLKFCRWVEPH 155
>gi|218297061|ref|ZP_03497738.1| methyltransferase GidB [Thermus aquaticus Y51MC23]
gi|218242616|gb|EED09153.1| methyltransferase GidB [Thermus aquaticus Y51MC23]
Length = 242
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
++S L+ Y L L+ ++K +L + T + +H DSL + L +
Sbjct: 19 GLDLSPH-LKAFSTLYDLLLEGNRKASLTALRTEREVVAKHFLDSLTLLLLPLWEGPLRV 77
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACR 131
+DLG+G GFPG+ I +E V L+++ KK +FL VV +G A
Sbjct: 78 LDLGTGAGFPGLPLKIVRPELE---VVLLDATRKKVAFLEEVVAALGLKGAFPLWGRAEE 134
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ P+ ++ARA+A L L E P+L
Sbjct: 135 VAHLPEHREAYQRVTARAVAHLCVLAELGLPFL 167
>gi|319440492|ref|ZP_07989648.1| glucose-inhibited division protein B [Corynebacterium variabile DSM
44702]
Length = 221
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+ + L+ V+ W RH+ +S + ++ + +D+GSG G P
Sbjct: 27 LDLAVRYAGWLADAGVVRGLIGPREVDRLWDRHILNSAVIGEVIDDGARVVDIGSGAGLP 86
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI---TTC 142
GI +I + L+E ++A+FL VV+ E ++
Sbjct: 87 GIPLAIARPDLRVQ---LVEPLLRRATFLSEVVEDLGLDNVEVHRGRAEEKSIVTAVGGA 143
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A + L+ +S P +
Sbjct: 144 DVVTSRAVAPVGRLMGWSLPLARK 167
>gi|46199908|ref|YP_005575.1| glucose inhibited division protein B [Thermus thermophilus HB27]
gi|55976455|sp|Q72H89|RSMG_THET2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46197535|gb|AAS81948.1| glucose inhibited division protein B [Thermus thermophilus HB27]
Length = 249
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGG 83
LE Y L + S K+NL + E+ ++H DSL + +L + +DLG+G G
Sbjct: 33 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAG 92
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ---EAPQMI 139
FPG+ I +E + L+++ KK +F+ ++ + + R +
Sbjct: 93 FPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHR 149
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D ARA+A L L E P+L
Sbjct: 150 EAYDRAVARAVAPLCVLSELLLPFL 174
>gi|283458989|ref|YP_003363638.1| S-adenosylmethionine-dependent methyltransferase [Rothia
mucilaginosa DY-18]
gi|283135053|dbj|BAI65818.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Rothia mucilaginosa DY-18]
Length = 213
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L E + + L+ V W RHV + V + + D+GSG G
Sbjct: 22 ERLPLAERYVQHLATTGIERGLIGPREVPRLWARHVLNCAVVQEYIAPNASVADVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ +I ++ + LIE ++ +L VV+ E D
Sbjct: 82 LPGLCLAIARPDLK---LTLIEPLERRVIWLNEVVEDLGLENVTVLRSRAEQAVGAVEAD 138
Query: 144 VISARALADLDTLLEYSFPWLY 165
V++ARA++ L LL+ + P L
Sbjct: 139 VVTARAVSALVGLLDITLPILR 160
>gi|255326487|ref|ZP_05367569.1| 16S rRNA methyltransferase GidB [Rothia mucilaginosa ATCC 25296]
gi|255296527|gb|EET75862.1| 16S rRNA methyltransferase GidB [Rothia mucilaginosa ATCC 25296]
Length = 213
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L E + + L+ V W RHV + V + + D+GSG G
Sbjct: 22 ERLPLAERYVQHLATTGIERGLIGPREVPRLWARHVLNCAVVQEYIAPNASVADVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ +I ++ + LIE ++ +L VV+ E D
Sbjct: 82 LPGLCLAIARPDLK---LTLIEPLERRVIWLNEVVEDLGLENVTVLRSRAEQAVGAVEAD 138
Query: 144 VISARALADLDTLLEYSFPWLY 165
V++ARA++ L LL+ + P L
Sbjct: 139 VVTARAVSALVGLLDITLPILR 160
>gi|120556789|ref|YP_961140.1| methyltransferase GidB [Marinobacter aquaeolei VT8]
gi|166224597|sp|A1U7I4|RSMG_MARAV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120326638|gb|ABM20953.1| 16S rRNA m(7)G-527 methyltransferase [Marinobacter aquaeolei VT8]
Length = 214
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + R + DSL + + +D+G+GGG PGI +I +
Sbjct: 38 KWNKAYNLTAVRDERVMVSRQLLDSLSILPWVTTDHL-LDVGAGGGLPGIPLAIVVPEKR 96
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S KK FL V + +V R ++ Q IS+RA L+ L
Sbjct: 97 ---FTLLDSNGKKTRFLNQCVLELGLDNVEVIHGRAEDC-QPDQPFTQISSRAFTALENL 152
Query: 157 LEYSFPWLYQ 166
+ + L
Sbjct: 153 VTWCGGLLAN 162
>gi|294783015|ref|ZP_06748339.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 1_1_41FAA]
gi|294479893|gb|EFG27670.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 1_1_41FAA]
Length = 232
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKIEKALKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKEED 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I L++S KK FL V + +V R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKN---FTLLDSVRKKTDFLELVKSELVLNNVEVINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|328675262|gb|AEB27937.1| Ribosomal RNA small subunit methyltransferase G [Francisella cf.
novicida 3523]
Length = 202
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 62/161 (38%), Gaps = 6/161 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ + + + + + L KW+K N+ + ++D ++H+ DSL V
Sbjct: 1 MKDKIKQALSQLSIQATDIQITQWLDYLKLLEKWNKVYNMTAIKKLDDMLVKHLFDSLAV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+G+GGG PG++ +I + L++ + K ++ +
Sbjct: 61 AKYIKGS-STVDVGTGGGLPGVVLAILYPQHQFTLIDSVGKKIMFLKNVKKSLNLNNIN- 118
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D I +RA + +DT E L +
Sbjct: 119 ----PLNMRIENFDGNFDNIISRAFSSVDTFYELCKQLLTE 155
>gi|256846127|ref|ZP_05551585.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
gi|256719686|gb|EEU33241.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
Length = 232
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKMEKSLKYLEILLDYNSHTNLTAIREEKTIIEKHFLDSLLLQNLLKDGD 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKK---FTLLDSVRKKTDFLELVKNELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|294784743|ref|ZP_06750031.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_27]
gi|294486457|gb|EFG33819.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_27]
Length = 232
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLHNLLKEED 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKK---FILLDSVRKKIDFLELVKNELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|225457144|ref|XP_002283664.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 208
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRV-----------FQLHPYPSIWIDLGSGGGFPGIITSI 91
+NL + + ++ RHV DSL + +D+GSG G PG+I +I
Sbjct: 1 MNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSSCNNISLVDVGSGPGLPGLILAI 60
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MITTCDVISA 147
S + + L+ES NK+ FL + V T +V R + Q DV A
Sbjct: 61 ACPSWK---ITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRAENLGQNIGFREVFDVAVA 117
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A++ L EY P +
Sbjct: 118 RAVAEMRILAEYCLPLVR 135
>gi|94986432|ref|YP_605796.1| methyltransferase GidB [Deinococcus geothermalis DSM 11300]
gi|189039381|sp|Q1IVV7|RSMG_DEIGD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94556713|gb|ABF46627.1| 16S rRNA m(7)G-527 methyltransferase [Deinococcus geothermalis DSM
11300]
Length = 245
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 9/150 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLG 79
S E L++ + S ++NL + D ++H DSL + + +DLG
Sbjct: 21 SAEHLDRFARLLVRLTEGSAQLNLTALHQERDIVLKHFVDSLTCLRGGWLDGAARVLDLG 80
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR----GKVFACRIQEA 135
+G GFP + +I ++ + +++ KK F+ + A +
Sbjct: 81 TGAGFPALPLAIVRPDLQ---LVALDATRKKVDFVERTARSLELNHVQPLTGRAETLGRD 137
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
P + D + RA+A L L E + P+L
Sbjct: 138 PAQRESYDRVVTRAVAALPILAELTLPFLR 167
>gi|262066108|ref|ZP_06025720.1| 16S rRNA methyltransferase GidB [Fusobacterium periodonticum ATCC
33693]
gi|291380203|gb|EFE87721.1| 16S rRNA methyltransferase GidB [Fusobacterium periodonticum ATCC
33693]
Length = 232
Score = 77.4 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKIEKALKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKEED 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I L++S KK FL V + + ++ R
Sbjct: 69 KALIDIGTGAGFPGMMLTIFNEDKN---FTLLDSVRKKTDFLELVKNELSLNNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|285016924|ref|YP_003374635.1| methyltransferase gidb (glucose-inhibited division protein b)
[Xanthomonas albilineans GPE PC73]
gi|283472142|emb|CBA14649.1| probable methyltransferase gidb (glucose-inhibited division protein
b) [Xanthomonas albilineans]
Length = 213
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W++ NL + + RH+ DSL Q + DLG+G G PG+ +I +
Sbjct: 41 RWNRTYNLTAIRDPHEMVTRHLLDSLA-MQPFVGEGVLADLGTGPGLPGLPLAIARPHL- 98
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
V L+ES KKA FLR V++ A EA D+++ARAL L ++
Sbjct: 99 --HVTLVESNGKKARFLREAVRQLRLDNARVAETRAEALDEPGGYDLLTARALDTLAGIV 156
Query: 158 EYSFPWLYQ 166
L
Sbjct: 157 AVGGHLLRP 165
>gi|308061735|gb|ADO03623.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Cuz20]
Length = 178
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|261839232|gb|ACX98997.1| glucose-inhibited division protein B [Helicobacter pylori 52]
Length = 178
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPKVQ---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|237742803|ref|ZP_04573284.1| glucose inhibited division protein B [Fusobacterium sp. 4_1_13]
gi|229430451|gb|EEO40663.1| glucose inhibited division protein B [Fusobacterium sp. 4_1_13]
Length = 232
Score = 77.4 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLHNLLKEED 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKK---FILLDSVRKKTDFLELVKNELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|298736675|ref|YP_003729203.1| ribosomal RNA small subunit methyltransferase G [Helicobacter
pylori B8]
gi|298355867|emb|CBI66739.1| ribosomal RNA small subunit methyltransferase G [Helicobacter
pylori B8]
Length = 178
Score = 77.4 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPETK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQCFLKDK 139
>gi|320109303|ref|YP_004184893.1| methyltransferase GidB [Terriglobus saanensis SP1PR4]
gi|319927824|gb|ADV84899.1| methyltransferase GidB [Terriglobus saanensis SP1PR4]
Length = 196
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 9 ILRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ ++ L N + EKL + L LKW+ + NL + E RH +SL +
Sbjct: 1 MKVSSLLQPYLNAPLPDGVEEKLAQYLELILKWNARTNLTAVRDAEGIVRRHFGESLFLG 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P S +D GSG GFPGI + + V L ES+ KKASFLR V+ A
Sbjct: 61 GLLPEFSTLLDFGSGAGFPGIPVQLIRPLSK---VTLAESQGKKASFLREAVRSLAIPSD 117
Query: 127 VFACRIQEAPQMITTCDVISARAL 150
V+A R++ P+ T DV++ RA+
Sbjct: 118 VWAARVETMPESKT-FDVVAMRAV 140
>gi|188527194|ref|YP_001909881.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Shi470]
gi|188143434|gb|ACD47851.1| glucose-inhibited division protein B [Helicobacter pylori Shi470]
gi|308063246|gb|ADO05133.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Sat464]
Length = 178
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|317013827|gb|ADU81263.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Gambia94/24]
Length = 178
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + E Q + D+I++R
Sbjct: 64 LALEKPEAQ---FILLEPRIKRAAFLNYLKSVLPLNNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSRCFLKDK 139
>gi|217031610|ref|ZP_03437115.1| hypothetical protein HPB128_21g168 [Helicobacter pylori B128]
gi|216946810|gb|EEC25406.1| hypothetical protein HPB128_21g168 [Helicobacter pylori B128]
Length = 253
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPETK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQCFLKDK 139
>gi|254417639|ref|ZP_05031373.1| methyltransferase GidB [Microcoleus chthonoplastes PCC 7420]
gi|196175557|gb|EDX70587.1| methyltransferase GidB [Microcoleus chthonoplastes PCC 7420]
Length = 224
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SLRVFQLHPYPSIWID 77
+ ++ + Y L ++++NL + ++FW +H+ D + P ID
Sbjct: 18 TESQHQQFQRLYAGILAGNRQLNLTRITQPDEFWEKHLWDSLRGVASLLSGEEKPLNIID 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACRIQ 133
+G+G GFPG+ +I L S V L++S KK +FL ++ + A A ++
Sbjct: 78 IGTGAGFPGLPVAIALPS---SSVTLLDSTRKKITFLDSLIPQLAIPNATTVLGRAEKVG 134
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+ RA+ +Y+ P++
Sbjct: 135 QQRQHHQRYDIALVRAVGSASACADYALPFVK 166
>gi|108562809|ref|YP_627125.1| 16S rRNA methyltransferase GidB [Helicobacter pylori HPAG1]
gi|123247021|sp|Q1CUC1|RSMG_HELPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|107836582|gb|ABF84451.1| glucose-inhibited division protein [Helicobacter pylori HPAG1]
Length = 178
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKCLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLENYQSPLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|221633259|ref|YP_002522484.1| methyltransferase GidB [Thermomicrobium roseum DSM 5159]
gi|221156899|gb|ACM06026.1| methyltransferase GidB [Thermomicrobium roseum DSM 5159]
Length = 254
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL------HPYPSI 74
+ E + + L L+W+++INL R + +SL + P
Sbjct: 22 FTPERERAFQQYGQLLLQWNRQINLTGLDEWSAIQRRLLVESLALLPWVDRACERKTPCR 81
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
ID+G+G G PGI ++ S+ ++ L+++ KK FL VVQ+ R +
Sbjct: 82 MIDVGTGAGIPGIPIAVVRPSL---MITLLDATKKKIRFLETVVQQLRLANVVPIHERAE 138
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + +ARALA L T E + P+L
Sbjct: 139 VLAHQPAHRGRYHLATARALAHLATACELTLPFLAP 174
>gi|295394852|ref|ZP_06805065.1| 16S rRNA methyltransferase GidB [Brevibacterium mcbrellneri ATCC
49030]
gi|294972185|gb|EFG48047.1| 16S rRNA methyltransferase GidB [Brevibacterium mcbrellneri ATCC
49030]
Length = 209
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ + L+ ++ W RH+ + V L + D+GSG G PG++ S+
Sbjct: 25 YAEHLATTGVEWGLIGPRELDKLWTRHILNCAVVAPLIHDDDVVGDIGSGAGLPGLVLSL 84
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARAL 150
LIE+ ++ +L VV ++ R+++ V++ARA+
Sbjct: 85 AQP---HASFVLIEAMERRVDWLGMVVDDLGIENVRIIRGRVEDLVD-DEVFTVVTARAV 140
Query: 151 ADLDTLLEYSFPWLYQ 166
L+ L+E+S P L
Sbjct: 141 KALNVLVEWSAPVLSP 156
>gi|296329305|ref|ZP_06871806.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296153661|gb|EFG94478.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 232
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKMEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDED 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG+I +I + L++S KK FL V + A +V R
Sbjct: 69 KTLIDIGTGAGFPGMILAIFNEDKK---FTLLDSVRKKTDFLELVKNELALNNVEVINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|56751255|ref|YP_171956.1| 16S rRNA methyltransferase GidB [Synechococcus elongatus PCC 6301]
gi|81299078|ref|YP_399286.1| 16S rRNA methyltransferase GidB [Synechococcus elongatus PCC 7942]
gi|81596038|sp|Q5N2N4|RSMG_SYNP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123557523|sp|Q31RM0|RSMG_SYNE7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56686214|dbj|BAD79436.1| glucose inhibited division protein B [Synechococcus elongatus PCC
6301]
gi|81167959|gb|ABB56299.1| methyltransferase GidB [Synechococcus elongatus PCC 7942]
Length = 242
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWIDLGSGGGFP 85
E Y + ++++NL + +F +H+ DSL + + ID+G+GGGFP
Sbjct: 28 FEALYHGIIAGNQRLNLTRITDPAEFTEKHLWDSLYGLRPLLTDDWSGEIIDIGTGGGFP 87
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA----CRIQEAPQMITT 141
G+ +I ++ V L++S KK FL+ + Q+ A +
Sbjct: 88 GLPAAI---ALTKSRVMLLDSTRKKIQFLQTLAQELGLSNVTVAVGRAEEWGRDRRQRAR 144
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
D + RA+ EY P L
Sbjct: 145 YDWATIRAVGPATVCAEYCLPLLK 168
>gi|291276349|ref|YP_003516121.1| glucose-inhibited division protein B [Helicobacter mustelae 12198]
gi|290963543|emb|CBG39375.1| glucose-inhibited division protein B; GidB [Helicobacter mustelae
12198]
Length = 179
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E + L L+W++ NL + T ++ DS+ + S ID+GSG GFP
Sbjct: 7 EAFLTYINLLLEWNQIHNLSGNLTPR-LAEEYLLDSIYPLEFIQSFSRCIDVGSGAGFPA 65
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVI 145
+ +I E LIE +NK+A+FL+YV + +V RI+E D+I
Sbjct: 66 VPLAICCPRSE---FLLIEPRNKRAAFLQYVSSELGLSNIQVKKMRIEEVGG--RCVDLI 120
Query: 146 SARALADLDTLLEYSFPWL 164
++RA+ D +L+ L
Sbjct: 121 TSRAVMDAPSLIASCSHLL 139
>gi|308182553|ref|YP_003926680.1| 16S rRNA methyltransferase GidB [Helicobacter pylori PeCan4]
gi|308064738|gb|ADO06630.1| 16S rRNA methyltransferase GidB [Helicobacter pylori PeCan4]
Length = 178
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPETQ---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|304413042|ref|ZP_07394515.1| glucose-inhibited cell-division protein B [Candidatus Regiella
insecticola LSR1]
gi|304283885|gb|EFL92278.1| glucose-inhibited cell-division protein B [Candidatus Regiella
insecticola LSR1]
Length = 189
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 26/163 (15%)
Query: 9 ILRA-NYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ YLL +S + ++L ++ L KW+K NL S + IRH+ DS+ V
Sbjct: 1 MLKKLEYLLATAKITLSDKQKQQLIHYVLLLDKWNKTYNLTSVRDPQQILIRHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + +ID+G+G G PGI +I I L++S K+ F G
Sbjct: 60 VKPYLKGEQFIDVGTGAGLPGIPLAIVCPDI---HFTLLDSLGKRVRFXXXXXXXXXXHG 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ +RA A + +L + + K
Sbjct: 117 -------------------VISRAFASITDMLSCCHHLVDKNK 140
>gi|89067426|ref|ZP_01154939.1| glucose-inhibited division protein B [Oceanicola granulosus
HTCC2516]
gi|89046995|gb|EAR53049.1| glucose-inhibited division protein B [Oceanicola granulosus
HTCC2516]
Length = 188
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFPGIIT 89
F L KW+ +INLVS ++ D RH+ DS+++++ P W DLGSGGGFPGII
Sbjct: 3 EFAQLVAKWNPRINLVSKGSLADLHDRHIADSIQLYRHIPPEVESWADLGSGGGFPGIIL 62
Query: 90 SIQLSSIE--GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+I V L+ES +KA+FLR ++ V RI++ P M +SA
Sbjct: 63 AILAKGTRSSPIEVTLVESDQRKATFLRTASRQLDLAVNVATSRIEDLPPM--NAHGLSA 120
Query: 148 RALADLDTLLEYSFPWLYQ 166
RALA L LL+Y+ L
Sbjct: 121 RALAPLTKLLDYAARHLSP 139
>gi|317177196|dbj|BAJ54985.1| glucose-inhibited division protein B [Helicobacter pylori F16]
Length = 178
Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|297379605|gb|ADI34492.1| methyltransferase GidB [Helicobacter pylori v225d]
Length = 178
Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + R + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLSLRNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|255037112|ref|YP_003087733.1| methyltransferase GidB [Dyadobacter fermentans DSM 18053]
gi|254949868|gb|ACT94568.1| methyltransferase GidB [Dyadobacter fermentans DSM 18053]
Length = 206
Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 14 YLLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLH 69
L++ Y +++ + +K L+ W+ ++N++S ++ + RHV + Q
Sbjct: 2 ELIDQYFPDLTADQRDKFGQMGELYEYWNARVNVISRQDIDTLYERHVLHSLGIAKVQQF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPG+ +I + L++S KK ++ +V
Sbjct: 62 RPGTAILDVGTGGGFPGVPLAIMFPEAQFH---LVDSIGKKIRVVQEIVNALKLDN--VR 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
A ++ + + + +RA+ + + +
Sbjct: 117 AEQVRAEKLDDSYEFVVSRAVTRMAPFVGW 146
>gi|210134579|ref|YP_002301018.1| 16S rRNA methyltransferase GidB [Helicobacter pylori P12]
gi|210132547|gb|ACJ07538.1| glucose inhibited division protein B [Helicobacter pylori P12]
Length = 178
Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYVRILLEWNQTHNLSGAKRLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|89898872|ref|YP_521343.1| 16S rRNA methyltransferase GidB [Rhodoferax ferrireducens T118]
gi|122477996|sp|Q21QL4|RSMG_RHOFD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89343609|gb|ABD67812.1| methyltransferase GidB [Rhodoferax ferrireducens T118]
Length = 224
Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 51/162 (31%), Gaps = 20/162 (12%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---------------RV 65
+ + L + L KW++ NL + + H+ DSL +
Sbjct: 19 LEDRQIALLLDYLALIQKWTQVYNLTAVREPAEMLTHHLLDSLAVIQPLRRQLAGLRDQT 78
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+GSG G PG++ +I I V+ + K + ++
Sbjct: 79 PDTDTANVRLLDVGSGAGLPGVVIAICCPEITVDCVDTVAKKVAFIRQVAATLKLANL-- 136
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ VI +RA A L S L +
Sbjct: 137 ---HGLHARVESLTGPYRVICSRAFASLADFTRLSSAALAPQ 175
>gi|19705043|ref|NP_602538.1| glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|22095723|sp|Q8RI89|RSMG_FUSNN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19712959|gb|AAL93837.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 232
Score = 76.6 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKMEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDED 68
Query: 74 IW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG+I +I + L++S KK FL V + A +V R
Sbjct: 69 KTLIDIGTGAGFPGMILAIFNEDKK---FTLLDSVRKKTDFLELVKNELALNNVEVINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|314922664|gb|EFS86495.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL001PA1]
gi|314965748|gb|EFT09847.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL082PA2]
gi|314982891|gb|EFT26983.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA3]
gi|315091199|gb|EFT63175.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA4]
gi|315094430|gb|EFT66406.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL060PA1]
gi|315105150|gb|EFT77126.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL050PA2]
gi|327328926|gb|EGE70686.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL103PA1]
Length = 211
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 18 RDNYKTIRQYVDILASRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E LIE ++++FL + + R V R ++A
Sbjct: 78 GLPGIPLAILRPDLEM---ILIEPMLRRSNFLTEAIDELGLDDRVSVVRGRAEDADLH-- 132
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
DV+ +RA+A L TL+ ++ +
Sbjct: 133 -VDVVVSRAVAKLATLINWTADLI 155
>gi|282853031|ref|ZP_06262368.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J139]
gi|282582484|gb|EFB87864.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J139]
Length = 208
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 15 RDNYKTIRQYVDILASRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 74
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E LIE ++++FL + + R V R ++A
Sbjct: 75 GLPGIPLAILRPDLEM---ILIEPMLRRSNFLTEAIDELGLDDRVSVVRGRAEDADLH-- 129
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
DV+ +RA+A L TL+ ++ +
Sbjct: 130 -VDVVVSRAVAKLATLINWTADLI 152
>gi|307637080|gb|ADN79530.1| rRNA small subunit methyltransferase,glucose inhibited division
protein [Helicobacter pylori 908]
gi|325995671|gb|ADZ51076.1| rRNA small subunit methyltransferase/glucose inhibited division
protein B [Helicobacter pylori 2018]
gi|325997267|gb|ADZ49475.1| 16S rRNA methyltransferase [Helicobacter pylori 2017]
Length = 178
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYACILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I+ + L+E + K+A+FL Y+ + E Q + D+I++R
Sbjct: 64 LAIEKPEAQ---FILLEPRIKRAAFLNYLKSVLPLNNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSRCFLKDK 139
>gi|46579661|ref|YP_010469.1| methyltransferase GidB [Desulfovibrio vulgaris str. Hildenborough]
gi|120602856|ref|YP_967256.1| glucose inhibited division protein [Desulfovibrio vulgaris DP4]
gi|81566895|sp|Q72CN3|RSMG_DESVH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806442|sp|A1VEG3|RSMG_DESVV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46449076|gb|AAS95728.1| methyltransferase GidB [Desulfovibrio vulgaris str. Hildenborough]
gi|120563085|gb|ABM28829.1| 16S rRNA m(7)G-527 methyltransferase [Desulfovibrio vulgaris DP4]
gi|311233459|gb|ADP86313.1| glucose inhibited division protein [Desulfovibrio vulgaris RCH1]
Length = 218
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-----PYP 72
+ S LE + + L L W++ +NLV + T +D + V DSL + P
Sbjct: 20 GFEPSPGMLEAIAGYLELLLHWNRSMNLVGTRTWQDTFHTLVVDSLHLAAFLDTLPLPPE 79
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACR 131
DLG+G G PGI ++ + G ++E++ K+A FLR + + G VF R
Sbjct: 80 PEVWDLGAGAGLPGIPL---RAAWQRGNYTMVEAREKRAMFLRMALARHPLPGTNVFQGR 136
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D++ +RA LL++ L
Sbjct: 137 AEAFMPSRPPADLVVSRAFMPWRELLDFVSGHLAP 171
>gi|257792844|ref|YP_003183450.1| methyltransferase GidB [Eggerthella lenta DSM 2243]
gi|257476741|gb|ACV57061.1| methyltransferase GidB [Eggerthella lenta DSM 2243]
Length = 213
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSGGGF 84
+ L+ L ++ +K N+ ST ++ + HV+D +D+GSG G+
Sbjct: 4 DLLKRHLELVIEANKTTNITRISTWDEGMLLHVQDSLVGLPELREAPEGRMVDIGSGAGY 63
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMITTC 142
PGI +I+ G L +S KK + L +VQ V+ RI++ A + +
Sbjct: 64 PGIPLAIE----SGRSTLLADSVGKKTAILASMVQTLGLDNVDVYTGRIEDLAREEPASF 119
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
++ARALA L L+E++ P L +
Sbjct: 120 AAVTARALAQLSILMEFASPLLQE 143
>gi|317180720|dbj|BAJ58506.1| glucose-inhibited division protein B [Helicobacter pylori F32]
Length = 178
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRVKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|254818673|ref|ZP_05223674.1| 16S rRNA methyltransferase GidB [Mycobacterium intracellulare ATCC
13950]
Length = 246
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L + L+ V+ W RH+ +S V +L ID+GSG G PGI
Sbjct: 42 QRYATLLAGAGVERGLLGPREVDRIWDRHILNSAAVAELLGAGERVIDIGSGAGLPGIPL 101
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I +E L+ E +++ FL VV + +V R +E + D +
Sbjct: 102 AIARPDLEVVLL---EPLLRRSEFLNEVVDELGLAVEVVRGRAEEPGVRDRFGSRDAAVS 158
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P L
Sbjct: 159 RAVAALDKLTKWSMPLLRP 177
>gi|317179222|dbj|BAJ57010.1| glucose-inhibited division protein B [Helicobacter pylori F30]
gi|317181726|dbj|BAJ59510.1| glucose-inhibited division protein B [Helicobacter pylori F57]
Length = 178
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|123969209|ref|YP_001010067.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. AS9601]
gi|166224602|sp|A2BT49|RSMG_PROMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123199319|gb|ABM70960.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. AS9601]
Length = 237
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 9 ILRANYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF- 66
+ + N ++ + E + + + + K NL + +D+W+ V DS+ F
Sbjct: 1 MKKQNIPEEILSLITEEEINLFQELQIKIKELNNKTNLTRLTDGDDYWVSQVFDSIWPFK 60
Query: 67 ---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ ++D+GSG GFPG+ +I + E L++ ++ K L +
Sbjct: 61 AFTNINFDNKKFLDIGSGCGFPGLAYAITHPNSEIYLIDSLKKKTDAIKILVEQIN-FKN 119
Query: 124 RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
V R++ M ++ + RA+++ T+ EY P L ++
Sbjct: 120 NIHVINDRVENLAHQSSMRNNFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|94312436|ref|YP_585646.1| 16S rRNA methyltransferase GidB [Cupriavidus metallidurans CH34]
gi|189040713|sp|Q1LHJ9|RSMG_RALME RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|93356288|gb|ABF10377.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Cupriavidus
metallidurans CH34]
Length = 235
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 8/157 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ ++ L + L KW+ NL + ++ H+ DSL + +
Sbjct: 26 GLALTPAQVDTLFAYLTLLRKWNGVYNLTAIRHPDEMLTHHLLDSLTAVPALAEAARSAN 85
Query: 78 LGSGG--------GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ G G+ S V +++ KK +FL +
Sbjct: 86 VAQGARGRVLDVGSGGGMPGMPLAISCPDVSVLMVDIVQKKTAFLTQCRAQLHLTNAAAH 145
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E VI++RA A+L + S L
Sbjct: 146 WGPVEKIDDEQGYAVITSRAFAELTDFVTLSGHLLAP 182
>gi|288939800|ref|YP_003442040.1| methyltransferase GidB [Allochromatium vinosum DSM 180]
gi|288895172|gb|ADC61008.1| methyltransferase GidB [Allochromatium vinosum DSM 180]
Length = 231
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 6/140 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ E +L L +W++ NL + + +H+ DSL + + +D
Sbjct: 40 GLAPTPEQQARLVALLGLLTRWNQAYNLTAVRDPLEMVAKHLLDSLAI-APFLFGETVLD 98
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+G G PG+ +I + L++S NKK F+R V + + RI+
Sbjct: 99 VGTGAGLPGLPLAILVPERRFW---LLDSNNKKVRFVRQAVLELGLTNVEPVQSRIETYR 155
Query: 137 QMITTCDVISARALADLDTL 156
I +RA+A L
Sbjct: 156 PGR-KFSTIVSRAVAAESVL 174
>gi|157414076|ref|YP_001484942.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9215]
gi|166989554|sp|A8G6X5|RSMG_PROM2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157388651|gb|ABV51356.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9215]
Length = 237
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 9 ILRANYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF- 66
+ + N ++ + E + + + + K NL + +D+W+ V DS+ F
Sbjct: 1 MKKQNIPEEILSLITEEEINLFQELQIKIKELNNKTNLTRLTDGDDYWVSQVFDSIWPFK 60
Query: 67 ---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ ++D+GSG GFPG+ +I + E L++ ++ K FL +
Sbjct: 61 AFTNINFDNKKFLDIGSGCGFPGLAYAITHPNSEIYLIDSLKKKTDAIKFLVKQIN-FKN 119
Query: 124 RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
V R++ M ++ + RA+++ T+ EY P L ++
Sbjct: 120 NIHVINDRVENLAHQSSMRNNFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|268318295|ref|YP_003292014.1| glucose inhibited division protein [Rhodothermus marinus DSM 4252]
gi|262335829|gb|ACY49626.1| glucose inhibited division protein [Rhodothermus marinus DSM 4252]
Length = 239
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 12/149 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWIDLG 79
+ E+LE++ L + + NLVS T+ + RH+ L ++ P S+ +D G
Sbjct: 29 LDPAQREQLEHYARLLQELGRHHNLVSRETLPELHRRHLLHCLALTWRPFPPGSVVVDWG 88
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
+GGG P + +I V+ +++ KK +R + ++ +V R +
Sbjct: 89 TGGGLPAVPLAIAFPE---VTVHAVDAAQKKVLAVRTMARRLGLANLQVHHARAERWE-- 143
Query: 139 ITTCDVISARALADLDTLLEY----SFPW 163
+RA A L TL ++ + P
Sbjct: 144 -GAAHYSVSRATAPLATLWQWHRRVARPL 171
>gi|315586375|gb|ADU40756.1| 16S rRNA methyltransferase GidB [Helicobacter pylori 35A]
Length = 178
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ R + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLRNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLKDK 139
>gi|33863763|ref|NP_895323.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str. MIT
9313]
gi|55976487|sp|Q7V5Q2|RSMG_PROMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33635346|emb|CAE21671.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9313]
Length = 247
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPS 73
++ S E LE++ L +W+ ++NL D+WI V DSL Q P
Sbjct: 19 GWHPSSEQLEQMIALQALLRQWNARVNLTRLVEGGDYWIMQVFDSLWPLQSELQNAQQPR 78
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
ID+GSGGGFPG++ +I L LV+ + K A +R V + R +
Sbjct: 79 RCIDIGSGGGFPGLVLAIALPGARITLVDSVGRK-TAALKAMAAKLGLTSRVTVRSERAE 137
Query: 134 EAPQM---ITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D+ ARA++ + EY P L
Sbjct: 138 FTGQDPCCRGLFDLAMARAVSTAPVVAEYLVPLLKP 173
>gi|261837817|gb|ACX97583.1| glucose-inhibited division protein [Helicobacter pylori 51]
Length = 178
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ R + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLRNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLKDK 139
>gi|126697003|ref|YP_001091889.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9301]
gi|166224601|sp|A3PEW3|RSMG_PROM0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126544046|gb|ABO18288.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9301]
Length = 237
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 9 ILRANYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF- 66
+ + N ++ + E + + + + K N+ + +D+W+ V DS+ F
Sbjct: 1 MKKQNIPEEILSLLTEEEINMFQELQIKIKELNNKTNITRLTDGDDYWVSQVFDSIWPFK 60
Query: 67 ---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ ++D+GSG GFPG+ +I + E L++ ++ K L +
Sbjct: 61 AFTNINFDNKKFLDIGSGCGFPGLAYAITHPNSEIYLIDSLKKKTDAIKILVEKIN-FKN 119
Query: 124 RGKVFACRIQEAPQM---ITTCDVISARALADLDTLLEYSFPWLYQK 167
V RI+ ++ + RA+++ T+ EY P L ++
Sbjct: 120 NIHVINDRIENLAHHSSMRNNFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|320104128|ref|YP_004179719.1| methyltransferase GidB [Isosphaera pallida ATCC 43644]
gi|319751410|gb|ADV63170.1| methyltransferase GidB [Isosphaera pallida ATCC 43644]
Length = 505
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S E + +L ++ L + ++NL E+ ++H DSL V + P+ ID+G+
Sbjct: 22 LSDEAIGRLWRYHRLLRAANPELNLTRIHQFENMVLKHYVDSLLVTRFEALPTPLIDMGT 81
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PG+ + +E + L E + + FL VV + G
Sbjct: 82 GPGLPGVPLKLARPELE---LILAEPRGARVEFLERVVAELGLEGVEVHPGKITRRYDRP 138
Query: 141 TCDVISARALADLDTLLE 158
T VI+ RA+A + LE
Sbjct: 139 TRGVIT-RAVASIPETLE 155
>gi|317489237|ref|ZP_07947754.1| glucose inhibited division protein [Eggerthella sp. 1_3_56FAA]
gi|325832342|ref|ZP_08165341.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Eggerthella sp.
HGA1]
gi|316911638|gb|EFV33230.1| glucose inhibited division protein [Eggerthella sp. 1_3_56FAA]
gi|325486178|gb|EGC88632.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Eggerthella sp.
HGA1]
Length = 213
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSGGGF 84
+ L+ L ++ +K N+ ST ++ + HV+D +D+GSG G+
Sbjct: 4 DLLKRHLELVIEANKTTNITRISTWDEGMLLHVQDSLVGLPELREAPEGRMVDIGSGAGY 63
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMITTC 142
PGI +I+ G L +S KK + L +VQ V+ RI++ A + +
Sbjct: 64 PGIPLAIE----SGRSTLLADSVGKKTTILASMVQTLGLDNVDVYTGRIEDLAREEPASF 119
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
++ARALA L L+E++ P L +
Sbjct: 120 AAVTARALAQLSILMEFASPLLQE 143
>gi|42521935|ref|NP_967315.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
gi|81618560|sp|Q6MQY9|RSMG1_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase G 1;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 1; Short=16S rRNA m7G
methyltransferase 1
gi|39574465|emb|CAE77969.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
Length = 205
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 10/151 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSS-TVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ L +L+ + L ++++NL+S T E+ HV D L + P
Sbjct: 14 QLGFNEAALPQLKAYLDLLWSSNEELNLISRKMTYEELIDNHVIDCLLPIKDFPKDVKVA 73
Query: 77 -DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D GSGGG PG+I +IQ ++E L + K + + G++
Sbjct: 74 ADFGSGGGLPGVIYAIQFPNVEYHLFEKSKLKQDFLNRCVSIAPNLRIHGEI-------- 125
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + +V+++RA +D +LE+S + +
Sbjct: 126 PPKLEKIEVVTSRAFKPVDVILEFSRDYYKK 156
>gi|187251663|ref|YP_001876145.1| methyltransferase GidB [Elusimicrobium minutum Pei191]
gi|186971823|gb|ACC98808.1| Methyltransferase GidB [Elusimicrobium minutum Pei191]
Length = 202
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 9/165 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
IL LN N++ + L + L +NL S S+ E+ W RH+ D L+
Sbjct: 1 MKKILEFINNLN-LNLTDGQMNALSAYVDLVWDKKNSMNLTSVSSKEEIWGRHIADGLQF 59
Query: 66 ----FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + D+GSG G+ G+ +I L L+ +E + ++ V++
Sbjct: 60 AKAVKDLGFEEGSFADIGSGAGYIGLAAAIALPKTNAALIESLEKRTIFLNWC--VLKLD 117
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R +A DV++ RA+ D +L ++
Sbjct: 118 IKNVTILNERAGQAEP--EQYDVVTERAMGKFDDILPVCMEYVKD 160
>gi|219110659|ref|XP_002177081.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411616|gb|EEC51544.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 346
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 14/163 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDSLRVFQLHP 70
+ ++N +S E+L + W+ +INLVS V + RHV S+
Sbjct: 84 DIVMNDLKLSGAQHEQLVSLCQAVVDWNDRINLVSRKDCTVATVFGRHVLPSIACCAFSE 143
Query: 71 YPSIWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ D+G+GGGFPG+ +I ++ L++S KK + + +
Sbjct: 144 DQNPLNTAKTLVDVGTGGGFPGLPLAIAYPDVQ---FVLLDSVGKKLTAAQDMANALGLD 200
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ + DV + R+++ + + +
Sbjct: 201 HVRTHHGRAEDLRDEV--FDVATGRSVSAIPQFCAWMQHLVKP 241
>gi|262277799|ref|ZP_06055592.1| 16S rRNA methyltransferase GidB [alpha proteobacterium HIMB114]
gi|262224902|gb|EEY75361.1| 16S rRNA methyltransferase GidB [alpha proteobacterium HIMB114]
Length = 205
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
++R+NY + VSRETL K+ ++ L+ ++K++L+S ST ++ RH D ++ +
Sbjct: 1 MIRSNYFDKS--VSRETLGKISKYHEFLLENNQKLSLISKSTEKEAIERHYADCAQIIKY 58
Query: 69 HPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYVVQKTAARGK 126
+ D+GSG G PGII I L+E KK++FL+ K
Sbjct: 59 FDKTDKSVLDIGSGAGLPGIILDIIKKDHNLNFSTHLVEKSPKKSNFLKKANSFLDLDIK 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ C +++ I + +RA +
Sbjct: 119 IHNCDVKQME--IKNFTTLVSRAFKPMKEFFNI 149
>gi|149375654|ref|ZP_01893423.1| glucose-inhibited division protein B [Marinobacter algicola DG893]
gi|149360056|gb|EDM48511.1| glucose-inhibited division protein B [Marinobacter algicola DG893]
Length = 225
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ NL + R + DSL + + +D+G+GGG PGI +I L
Sbjct: 38 KWNRAYNLTAVREPRQMVSRQLLDSLSILPFVTADHL-LDVGAGGGLPGIPLAITLPDRR 96
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S +KK FL V + ++ R + + IS+RA LD L
Sbjct: 97 ---FTLLDSNSKKTRFLTQCVLELGLKNVEIIHGRAESCDPAV-RYPQISSRAFTALDNL 152
Query: 157 LEYSFPWLYQK 167
+ + L +
Sbjct: 153 VNWCGHLLADE 163
>gi|118462827|ref|YP_884418.1| 16S rRNA methyltransferase GidB [Mycobacterium avium 104]
gi|189045860|sp|A0QND0|RSMG_MYCA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118164114|gb|ABK65011.1| methyltransferase GidB [Mycobacterium avium 104]
Length = 245
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + L+ V+ W RH+ +S V L ID+GSG G PGI
Sbjct: 41 QRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVAGLLGRGDRIIDIGSGAGLPGIPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I +E L+ E +++ FL VV + +V R +E P D +
Sbjct: 101 AIARPDLEVVLL---EPLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRNRFGDRDAAVS 157
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A LD L ++S P L
Sbjct: 158 RAVAALDKLTKWSMPLLR 175
>gi|313902792|ref|ZP_07836189.1| methyltransferase GidB [Thermaerobacter subterraneus DSM 13965]
gi|313466912|gb|EFR62429.1| methyltransferase GidB [Thermaerobacter subterraneus DSM 13965]
Length = 246
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSIWID 77
+S + L + + L + + + NL + + +RH DSL + + +D
Sbjct: 21 LSGDALVAMWRHWQLVREATGRFNLTAVREDAEALVRHYVDSLVLLGIAGPWAAEGLLVD 80
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-----ACRI 132
LGSG GFPGI + L G L+ES+ KKA+FLR V G+V A
Sbjct: 81 LGSGAGFPGIPLLVALG--PGWRGLLLESQGKKAAFLREAVTVLGLDGRVIVEPVRAEEA 138
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
D++ ARA+A L+ L EY P L
Sbjct: 139 GRRDSWREQADLVVARAVAPLNVLAEYGLPLLR 171
>gi|317012223|gb|ADU82831.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Lithuania75]
Length = 178
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYACILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|152968447|ref|YP_001364231.1| methyltransferase GidB [Kineococcus radiotolerans SRS30216]
gi|189045856|sp|A6WGM8|RSMG_KINRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151362964|gb|ABS05967.1| methyltransferase GidB [Kineococcus radiotolerans SRS30216]
Length = 254
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++ + L + L+ V W RH+ + + ++ S IDLGSG G PG
Sbjct: 38 DRAATYRELLATAGVERGLIGPREVPRLWDRHLLNCAYLGEVIDQGSSVIDLGSGAGLPG 97
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVI 145
I ++ ++ L+E ++ +FLR + + R +V A E + + V+
Sbjct: 98 IPLALARPDLQIR---LVEPLERRYTFLREAITELGLRDQVAVARGRAEDVRGEFSASVV 154
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A L TL ++ P +
Sbjct: 155 TARAVAPLKTLYGWALPLV 173
>gi|83815319|ref|YP_444214.1| glucose inhibited division protein B [Salinibacter ruber DSM 13855]
gi|123529871|sp|Q2S6G7|RSMG_SALRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83756713|gb|ABC44826.1| glucose inhibited division protein B [Salinibacter ruber DSM 13855]
Length = 215
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSIWIDLG 79
++ E E+++ F L++++++NL+S T + F RH+ + P +D G
Sbjct: 12 LTAEQREQIDRFREQLLRFNQRVNLISPETEDTFRTRHLLHCLTLTARDFPAGCTVVDWG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+GGG P I +I V ++S KK+ +R + ++ + +
Sbjct: 72 TGGGLPAIPLAICHPE---ATVVGVDSVGKKSRAVRTIARRLGLDNCFTWNGRAD--EWT 126
Query: 140 TTCDVISARALADLDTLLEY 159
+RA A L L +
Sbjct: 127 GEAHYSVSRATAPLADLWAW 146
>gi|332673231|gb|AEE70048.1| 16S rRNA methyltransferase GidB [Helicobacter pylori 83]
Length = 178
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLKDK 139
>gi|41410443|ref|NP_963279.1| glucose-inhibited division protein B [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|45645208|sp|Q9L7M3|RSMG_MYCPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|41399277|gb|AAS06895.1| Gid [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 248
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + L+ V+ W RH+ +S V +L ID+GSG G PGI
Sbjct: 44 QRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPL 103
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC---DVIS 146
+I +E L+ E +++ FL VV + +V R +E P + D
Sbjct: 104 AIARPDLEVVLL---EPLLRRSEFLTEVVDELGLAVEVVRGRAEERP-VRDRFGERDAAV 159
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A LD L ++S P L
Sbjct: 160 SRAVAALDKLTKWSMPLLR 178
>gi|6969267|gb|AAF33688.1| putative gidB [Mycobacterium avium subsp. paratuberculosis]
Length = 245
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + L+ V+ W RH+ +S V +L ID+GSG G PGI
Sbjct: 44 QRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPL 103
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC---DVIS 146
+I +E L+ E +++ FL VV + +V R +E P + D
Sbjct: 104 AIARPDLEVVLL---EPLLRRSEFLTEVVDELGLAVEVVRGRAEERP-VRDRFGERDAAV 159
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A LD L ++S P L
Sbjct: 160 SRAVAALDKLTKWSMPLLR 178
>gi|254777657|ref|ZP_05219173.1| 16S rRNA methyltransferase GidB [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 248
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + L+ V+ W RH+ +S V +L ID+GSG G PGI
Sbjct: 44 QRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPL 103
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC---DVIS 146
+I +E L+ E +++ FL VV + +V R +E P + D
Sbjct: 104 AIARPDLEVVLL---EPLLRRSEFLTEVVDELGLAVEVVRGRAEERP-VRDRFGERDAAV 159
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A LD L ++S P L
Sbjct: 160 SRAVAALDKLTKWSMPLLR 178
>gi|317484736|ref|ZP_07943636.1| 16S rRNA methyltransferase GidB [Bilophila wadsworthia 3_1_6]
gi|316923988|gb|EFV45174.1| 16S rRNA methyltransferase GidB [Bilophila wadsworthia 3_1_6]
Length = 224
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL------HPY 71
+ ++ ETL L + L ++W++ +NLV + T ED + V DSL + + +
Sbjct: 19 GFELTEETLPPLAGYLGLLIQWNRVMNLVGTRTAEDTFFTLVVDSLHLGRFLREDVEYSA 78
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
DLGSG G PG+ + + G ++E++ K+A FL V+ K G VF
Sbjct: 79 APCCWDLGSGAGLPGLPLRMI---WQEGDYWMVEAREKRALFLSTVLAKYPLPGTHVFRG 135
Query: 131 RIQE--APQMITTCDVISARALADLDTLLEY 159
R + A T D+I +RA +LE
Sbjct: 136 RAEAFMAGPPARTADLIVSRAFMPWPGVLEL 166
>gi|328956376|ref|YP_004373709.1| methyltransferase GidB [Coriobacterium glomerans PW2]
gi|328456700|gb|AEB07894.1| methyltransferase GidB [Coriobacterium glomerans PW2]
Length = 251
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 8/145 (5%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSIWIDLGSG 81
+ E L LK ++ NL + I HV DSL + + +D+G+G
Sbjct: 36 DQAELCVRHLLLVLKLNRTQNLTRITDPNKGLILHVLDSLLLSRYIHSDEQASLLDMGTG 95
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAP-QMI 139
GFPGI I + L++S KK + ++ R+++
Sbjct: 96 PGFPGIPLHI----LTRYPTVLVDSVRKKIEAVTDIISALDLSSVSAIHTRLEDFALSDY 151
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
+ ARALA L TLLE + P +
Sbjct: 152 DGFPFVVARALAPLPTLLELAAPLV 176
>gi|299473123|emb|CBN78699.1| glucose-inhibited division protein B [Ectocarpus siliculosus]
Length = 465
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDL 78
+S E K+ L +W+ K+NL+S + + RHV L + + + +D+
Sbjct: 223 LSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDGTYVLDV 282
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
G+GGG PG+ +I ++ LI+ KK + + + + F R +E
Sbjct: 283 GTGGGLPGLPLAICFPKVK---FTLIDGTGKKIKAVADMADRLGLTNVRTFHVRAEEVY- 338
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQKK 168
D + RA+ +L + + L
Sbjct: 339 --EAFDFVMGRAVTNLPKFVGFIDKNLKPND 367
>gi|319790633|ref|YP_004152266.1| methyltransferase GidB [Thermovibrio ammonificans HB-1]
gi|317115135|gb|ADU97625.1| methyltransferase GidB [Thermovibrio ammonificans HB-1]
Length = 208
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED------SLRVFQLH 69
LN + E +KLE F L KW ++INL S +H+ D + + ++
Sbjct: 10 LNGIELKEEHYQKLELFKELLKKWGRRINLTSLLDDTQIEEKHLFDSLLGLKAFKEAGIN 69
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ D+GSGGGFPG+ ++ ++E L+E + K+ FL V ++ KV
Sbjct: 70 VENASICDVGSGGGFPGVPLAV---ALENADFTLVEPRKKRCVFLEEVKRRLNLKNVKVA 126
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI++ ++++ RA+ D + ++ + L +
Sbjct: 127 CSRIEDVS---GPFNLLTMRAVEDPEGAVKITEHLLKE 161
>gi|255020231|ref|ZP_05292300.1| Ribosomal RNA small subunit methyltransferase G [Acidithiobacillus
caldus ATCC 51756]
gi|254970373|gb|EET27866.1| Ribosomal RNA small subunit methyltransferase G [Acidithiobacillus
caldus ATCC 51756]
Length = 215
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 4/135 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + +W++ NL + +H+ DSL + H + +D+GSG G PG+
Sbjct: 34 LLDYLAQLQRWNRSHNLTAIRDPHAMVAQHLLDSLAL-LPHLPDGLLLDVGSGAGLPGVP 92
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I S + LIE KKA+FLR+V + V E + + +R
Sbjct: 93 LAIVRSGQD---FVLIEPNAKKAAFLRHVHRHLGLVRVVVHAGRVENYRPPEPAAAVLSR 149
Query: 149 ALADLDTLLEYSFPW 163
A A L L +
Sbjct: 150 ATASLARLDAMTQHL 164
>gi|312880835|ref|ZP_07740635.1| 16S rRNA m(7)G-527 methyltransferase [Aminomonas paucivorans DSM
12260]
gi|310784126|gb|EFQ24524.1| 16S rRNA m(7)G-527 methyltransferase [Aminomonas paucivorans DSM
12260]
Length = 229
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 7/156 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L N+ R ++ +F L + + L + W HV D L P
Sbjct: 5 LTEPLNLLRRHEGEVRHFVALLATANTRARLTGPTDELVLWEDHVVDCAAALALLPQGGQ 64
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA---RGKVFACR 131
ID+G+GGG PG++ ++ V L++S +K + + +VQ R +V R
Sbjct: 65 VIDVGTGGGLPGLVWALCRPD---VAVTLLDSVERKCALVGEMVQVLGLPPERVQVVCER 121
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ A + D+ SARA+ + L E P +
Sbjct: 122 SETFAARNREVFDLASARAVCEAGVLAEVLSPLVRP 157
>gi|189501888|ref|YP_001957605.1| 16S rRNA methyltransferase GidB [Candidatus Amoebophilus asiaticus
5a2]
gi|189497329|gb|ACE05876.1| hypothetical protein Aasi_0466 [Candidatus Amoebophilus asiaticus
5a2]
Length = 216
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LH 69
+ + N++ + ++ ++ +W+ +NL+S + + ++RHV +L + +
Sbjct: 12 EIIFEHFDNLTSQQKDQFRQLGTIYQEWNACLNLISRKDLPNLYLRHVLHALSIAKLVQF 71
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPG+ +I +L++S NKK ++ +VQ A
Sbjct: 72 KPATKILDVGTGGGFPGVPLAILFP---QVHFHLVDSINKKVHAVQAIVQALALDNVTIQ 128
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
E + + I RA+ +L+T +
Sbjct: 129 TARAE--NLTNQYEFILGRAVTNLETFCGW 156
>gi|257065513|ref|YP_003145185.1| glucose-inhibited division protein B [Slackia heliotrinireducens
DSM 20476]
gi|256793166|gb|ACV23836.1| glucose-inhibited division protein B [Slackia heliotrinireducens
DSM 20476]
Length = 237
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIW 75
+S + L LK +K +NL T E I H+EDSL F +
Sbjct: 13 DIEISESQEQLLLADLDAILKVNKTMNLTRIDTYESALILHIEDSLAGLPFINDAPQGRY 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQ 133
D+G+GGGFPG+ +I L++S KK L VV + + R++
Sbjct: 73 ADIGTGGGFPGVPVAIM----TNRDTLLVDSVQKKVKALMGVVDGLGLNANIEGYPGRVE 128
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ A M V++ARA++ L +LLE P L +
Sbjct: 129 DLAKDMPGKFAVVTARAVSSLASLLELVSPLLKK 162
>gi|307720270|ref|YP_003891410.1| 16S rRNA m(7)G-527 methyltransferase [Sulfurimonas autotrophica DSM
16294]
gi|306978363|gb|ADN08398.1| 16S rRNA m(7)G-527 methyltransferase [Sulfurimonas autotrophica DSM
16294]
Length = 195
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 7/155 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ + ++ + +K++ + KW+K NL + + + D++
Sbjct: 3 LKTTLASDKIDLPNDFFQKVQKYKEHLFKWNKIHNLTGAKNEQTLNEF-IYDAVFPVSFL 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
P +D+G+G GFPG+I + L + + L+E K+ASFL+++ V
Sbjct: 62 PKVDSLMDIGTGAGFPGMILAFALPDTK---ITLVEPLTKRASFLQFIKADLGLENVSVV 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D+I++RA+ D LL S +
Sbjct: 119 KKRVEEMEPQM--FDLITSRAVTDTKMLLNLSKNF 151
>gi|15828599|ref|NP_325959.1| glucose-inhibited division protein B [Mycoplasma pulmonis UAB CTIP]
gi|20177898|sp|Q98R82|RSMG_MYCPU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14089541|emb|CAC13301.1| GLUCOSE INHIBITED DIVISION PROTEIN B [Mycoplasma pulmonis]
Length = 227
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSG 81
++T +LE F L + +KKINL S + W + +S++ + + + D+G+G
Sbjct: 13 QKTASRLEQFVKLIEEENKKINLTSF-EGQRLWQEGIYESIKCLEPFVKSNDSLLDIGAG 71
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFP + I ++ + +IES K+ FL V + ++F R++
Sbjct: 72 VGFPSVPFLIVNPEVK---LTIIESNKKRVLFLEKVKKDLNLSFEIFNGRVENF-NKEIH 127
Query: 142 CDVISARALADLDTLLEYSFPW 163
D I+ARALA L+ L+E +
Sbjct: 128 FDFITARALAPLNILMELTINL 149
>gi|94986875|ref|YP_594808.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division [Lawsonia intracellularis PHE/MN1-00]
gi|193806444|sp|Q1MR90|RSMG_LAWIP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94731124|emb|CAJ54486.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Lawsonia intracellularis
PHE/MN1-00]
Length = 216
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 11/158 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+R L +++S + +E L + L KW+K +NLV +T + + DS +
Sbjct: 12 IRQYCLQLGFSLSDQEIESLRGYLCLLTKWNKVMNLVGFTTWKTICSNLIIDSFHLAIFI 71
Query: 70 -----PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
P + D GSG G PGI I + G L+ES+ K+A FL+ ++ +
Sbjct: 72 RSLSLPTDPLCWDFGSGAGLPGIPLRII---WKEGSYWLVESREKRAIFLKTLLAQYPLT 128
Query: 125 GK-VFACRIQEA--PQMITTCDVISARALADLDTLLEY 159
V+ R++E ++ +I +RA LL+
Sbjct: 129 QTYVYCGRVEEFMLANCLSDVALIVSRAFMPWQALLKL 166
>gi|299135914|ref|ZP_07029098.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX8]
gi|298602038|gb|EFI58192.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX8]
Length = 220
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SLRVFQLHPYPSIWIDLGSGGG 83
+L + L L+W+ K NL + E+ RH + + + + +D GSG G
Sbjct: 45 RLSQYLDLLLRWNAKTNLTAIREPEEIVRRHFGESLFAARHLASRLAPEAALLDFGSGAG 104
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
FPG+ + L + V L ES+ KKASFLR V+ +V++ R++ P D
Sbjct: 105 FPGLPIQLLLPELR---VTLAESQGKKASFLREAVRTLGLATEVWSARVESMPAER-RFD 160
Query: 144 VISARALADLDTLLEYSFPWL 164
++ RA+ + L + P +
Sbjct: 161 AVTLRAVDHMQEALAAARPRV 181
>gi|109947704|ref|YP_664932.1| 16S rRNA methyltransferase GidB [Helicobacter acinonychis str.
Sheeba]
gi|123066175|sp|Q17WP3|RSMG_HELAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|109714925|emb|CAJ99933.1| glucose inhibited division protein B [Helicobacter acinonychis str.
Sheeba]
Length = 178
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRMKRAAFLNYLKSVLPLKNIEIVKKRLEEYQNPLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLNDK 139
>gi|145597097|ref|YP_001161394.1| 16S rRNA methyltransferase GidB [Salinispora tropica CNB-440]
gi|189040822|sp|A4XDK0|RSMG_SALTO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145306434|gb|ABP57016.1| methyltransferase GidB [Salinispora tropica CNB-440]
Length = 242
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + L+ W RH+ + V + P S +D+GSG G PG++ +
Sbjct: 30 AYAGLLVTDGVVRGLIGPREAPRIWDRHLLNCAAVAERIPLGSTVLDVGSGAGLPGLVLA 89
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTC-----D 143
+ + V L+E ++ +FL V + +V R +E D
Sbjct: 90 VARPDL---SVTLVEPLARRTAFLVEAVAQLDLAASVQVVRGRAEEIASGGGGVEPLTGD 146
Query: 144 VISARALADLDTLLEYSFPW 163
V++ARA+A LD L + P
Sbjct: 147 VVTARAVAPLDRLARWCLPL 166
>gi|241197033|ref|YP_002970588.1| 16S rRNA methyltransferase GidB [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|240251587|gb|ACS48526.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis DSM 10140]
Length = 247
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 50/192 (26%)
Query: 22 SRETLEK---LE-----------YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S E +E+ LE FY + L+ V+ W RH+ +S V
Sbjct: 6 SDEQIEQSGILETIFGDALPKVRAFYEKLKSEGEPRGLIGPRDVDILWERHLLNSAAVVP 65
Query: 68 LHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
D+GSGGGFPG++ + L LIE ++ +L V+
Sbjct: 66 FIRQATSGKQFRSVADIGSGGGFPGLVAAAMLPD---HTFTLIEPMERRCEWLSECVETM 122
Query: 122 AA-RGKVFACRIQEA--------------------------PQMITTCDVISARALADLD 154
++ R +EA + V++ RA+A +
Sbjct: 123 GLENVQIVRARSEEAIAALEQARGKSSGRGHAKNTVTPEVAQAIRHPFTVVTCRAVAPMT 182
Query: 155 TLLEYSFPWLYQ 166
L ++ P +
Sbjct: 183 KLTGWTLPLVAP 194
>gi|219684023|ref|YP_002470406.1| 16S rRNA methyltransferase GidB [Bifidobacterium animalis subsp.
lactis AD011]
gi|219621673|gb|ACL29830.1| methyltransferase GidB [Bifidobacterium animalis subsp. lactis
AD011]
Length = 243
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 50/192 (26%)
Query: 22 SRETLEK---LE-----------YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S E +E+ LE FY + L+ V+ W RH+ +S V
Sbjct: 2 SDEQIEQSGILETIFGDALPKVRAFYEKLKSEGEPRGLIGPRDVDILWERHLLNSAAVVP 61
Query: 68 LHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
D+GSGGGFPG++ + L LIE ++ +L V+
Sbjct: 62 FIRQATSGKQFRSVADIGSGGGFPGLVAAAMLPD---HTFTLIEPMERRCEWLSECVETM 118
Query: 122 AA-RGKVFACRIQEA--------------------------PQMITTCDVISARALADLD 154
++ R +EA + V++ RA+A +
Sbjct: 119 GLENVQIVRARSEEAIAALEQARGKSSGRGHAKNTVTPEVAQAIRHPFTVVTCRAVAPMT 178
Query: 155 TLLEYSFPWLYQ 166
L ++ P +
Sbjct: 179 KLTGWTLPLVAP 190
>gi|183602662|ref|ZP_02964026.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis HN019]
gi|241191628|ref|YP_002969022.1| 16S rRNA methyltransferase GidB [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|183218080|gb|EDT88727.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis HN019]
gi|240250020|gb|ACS46960.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|289177763|gb|ADC85009.1| GidB [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794620|gb|ADG34155.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis V9]
Length = 247
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 50/192 (26%)
Query: 22 SRETLEK---LE-----------YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S E +E+ LE FY + L+ V+ W RH+ +S V
Sbjct: 6 SDEQIEQSGILETIFGDALPKVRAFYEKLKSEGEPRGLIGPRDVDILWERHLLNSAAVVP 65
Query: 68 LHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
D+GSGGGFPG++ + L LIE ++ +L V+
Sbjct: 66 FIRQATSGKQFRSVADIGSGGGFPGLVAAAMLPD---HTFTLIEPMERRCEWLSECVETM 122
Query: 122 AA-RGKVFACRIQEA--------------------------PQMITTCDVISARALADLD 154
++ R +EA + V++ RA+A +
Sbjct: 123 GLENVQIVRARSEEAIAALEQARGKSSGRGHAKNTVTPEVAQAIRHPFTVVTCRAVAPMT 182
Query: 155 TLLEYSFPWLYQ 166
L ++ P +
Sbjct: 183 KLTGWTLPLVAP 194
>gi|317010660|gb|ADU84407.1| 16S rRNA methyltransferase GidB [Helicobacter pylori SouthAfrica7]
Length = 178
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLNEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + E Q D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRMKRAAFLNYLKSVLPLSNIEIVKKRLEDYQNPLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLNDK 139
>gi|303272167|ref|XP_003055445.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463419|gb|EEH60697.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 214
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 21/141 (14%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHP-------------YPSIWIDLGSGGGFPGIIT 89
+NL ++TV++ RHV DSL + + +D+GSG GFPG+
Sbjct: 1 MNLTGATTVDEVLSRHVADSLALIPPIEAALASSTTSSSPSHTPRILDVGSGAGFPGVAL 60
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA----PQMITTCDV 144
+I E V L+++ K+ +FL ++ A K R ++A + D+
Sbjct: 61 AIARPRWE---VTLLDTLQKRVAFLDAAAEECGATNVKTLWSRAEDAGKVGSEHREAYDI 117
Query: 145 ISARALADLDTLLEYSFPWLY 165
++ARA+A+L TL E P +
Sbjct: 118 VTARAVAELRTLAELCVPLVR 138
>gi|114762198|ref|ZP_01441666.1| glucose-inhibited division protein B [Pelagibaca bermudensis
HTCC2601]
gi|114545222|gb|EAU48225.1| glucose-inhibited division protein B [Roseovarius sp. HTCC2601]
Length = 181
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 79/134 (58%), Gaps = 4/134 (2%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQL 93
+ KWS KINLV+ ST+ D W RH+ DS +VF +W DLG+GGGFPG++ +I
Sbjct: 1 MLEKWSPKINLVAKSTLSDGWNRHIIDSAQVFDLRQQDTGLWADLGAGGGFPGLVVAILA 60
Query: 94 SSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
+ V L+ES +KA FLR V+++T V RI++ + D++SARALAD
Sbjct: 61 HELAPEMKVALVESDQRKAVFLRSVLRETGVSADVKVARIEQLAPLE--ADILSARALAD 118
Query: 153 LDTLLEYSFPWLYQ 166
L TLL ++ L
Sbjct: 119 LPTLLSFAERHLAP 132
>gi|315506963|ref|YP_004085850.1| methyltransferase gidb [Micromonospora sp. L5]
gi|315413582|gb|ADU11699.1| methyltransferase GidB [Micromonospora sp. L5]
Length = 362
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ W RH+ + V + P + ID+GSG G PG++ +I + V L+
Sbjct: 161 LIGPRETPRLWERHLLNCAVVAERIPEGASVIDVGSGAGLPGLVLAIARPDL---TVTLV 217
Query: 105 ESKNKKASFLRYVVQKTAA--RGKVFACRIQEA-----PQMITTCDVISARALADLDTLL 157
E ++ +FL VQ+ +VF R +EA + + D+++ARA+A LD L
Sbjct: 218 EPLARRTAFLIEAVQRLGLTRDVRVFRGRAEEAAAGSRDREPLSADIVTARAVAPLDRLA 277
Query: 158 EYSFPWLYQ 166
+ P +
Sbjct: 278 SWCLPLVAP 286
>gi|302870726|ref|YP_003839363.1| methyltransferase [Micromonospora aurantiaca ATCC 27029]
gi|302573585|gb|ADL49787.1| methyltransferase GidB [Micromonospora aurantiaca ATCC 27029]
Length = 362
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ W RH+ + V + P + ID+GSG G PG++ +I + V L+
Sbjct: 161 LIGPRETPRLWERHLLNCAVVAERIPEGASVIDVGSGAGLPGLVLAIARPDL---TVTLV 217
Query: 105 ESKNKKASFLRYVVQKTAA--RGKVFACRIQEA-----PQMITTCDVISARALADLDTLL 157
E ++ +FL VQ+ +VF R +EA + + D+++ARA+A LD L
Sbjct: 218 EPLARRTAFLIEAVQRLGLTRDVRVFRGRAEEAAAGSRDREPLSADIVTARAVAPLDRLA 277
Query: 158 EYSFPWLYQ 166
+ P +
Sbjct: 278 SWCLPLVAP 286
>gi|91070183|gb|ABE11104.1| putative glucose inhibited division protein B [uncultured
Prochlorococcus marinus clone HF10-11D6]
Length = 246
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 9/169 (5%)
Query: 7 NSILRANYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N + + N +++ + E + + + + K NL +D+W+ V DS+
Sbjct: 8 NEMKKQNIPEEIFSLITEEEIIMFQELQIKIKELNNKTNLTRLINGDDYWVSQVFDSIWP 67
Query: 66 FQLHPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
F+ P + ++D+GSG GFPG+ +I + E LV+ + K L +
Sbjct: 68 FKTFPNFNFDNKKFLDIGSGCGFPGLAYAITHPNSEIYLVDSSKKKTDALKALIKAIN-F 126
Query: 122 AARGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
V RI+ M + ++ + RA+++ T+ EY P L ++
Sbjct: 127 KNNIHVINDRIENLAHQSLMRNSFNIATTRAVSNPSTVSEYILPMLKKE 175
>gi|159040586|ref|YP_001539839.1| 16S rRNA methyltransferase GidB [Salinispora arenicola CNS-205]
gi|189040819|sp|A8LXK0|RSMG_SALAI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157919421|gb|ABW00849.1| methyltransferase GidB [Salinispora arenicola CNS-205]
Length = 242
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+ + L + L+ W RH+ + + P + +D+GSG G P
Sbjct: 25 LDLAVAYAGLLVTDGVIRGLIGPREAPRLWDRHLLNCAAATERIPLGATVVDVGSGAGLP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC--- 142
G++ ++ + LV + + + + A +V R +E
Sbjct: 85 GLVLAVARPDLSVVLVEPLARRTAFLVEAVEQL-ELGASVRVVRGRAEEVAVGGAGVEPL 143
Query: 143 --DVISARALADLDTLLEYSFPWL 164
DV++ARA+A LD L + P +
Sbjct: 144 TGDVVTARAVAPLDRLARWCLPLV 167
>gi|239918802|ref|YP_002958360.1| glucose-inhibited division protein B [Micrococcus luteus NCTC 2665]
gi|281414971|ref|ZP_06246713.1| 16S rRNA methyltransferase GidB [Micrococcus luteus NCTC 2665]
gi|239840009|gb|ACS31806.1| glucose-inhibited division protein B [Micrococcus luteus NCTC 2665]
Length = 241
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + E + + L+ W RHV + V +L P ++ D+GSG G
Sbjct: 47 EALPRAEAYVAHLADTGIEWGLIGPREAPRLWERHVLNCAVVEELLPQGALVADVGSGAG 106
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ ++ + LIE ++ +L VV E D
Sbjct: 107 LPGLCLALARPDCQ---FLLIEPLERRVEWLDRVVADLGLENVDVIRGRAEQVSGNLDVD 163
Query: 144 VISARALADLDTLLEYSFPWL 164
V++ARA++ L TL+ + P L
Sbjct: 164 VVTARAVSALKTLVPLTMPML 184
>gi|291532560|emb|CBL05673.1| 16S rRNA methyltransferase GidB [Megamonas hypermegale ART12/1]
Length = 143
Score = 74.7 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-- 75
++ + + +Y L ++W++KINL + + + I+H+ DSL +Q +
Sbjct: 15 GLELTSDQISAFNKYYELLVEWNEKINLTAITEPREVAIKHIVDSLSCYQKELFTGQVSL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
ID+G+G GFPG+ I ++ + L++S NK+ FL+ VV + + +V R +E
Sbjct: 75 IDVGTGAGFPGLPLKIFCPELK---LTLLDSLNKRVKFLQLVVDELGLKDVEVIHARSEE 131
Query: 135 APQMI 139
A +
Sbjct: 132 AARNK 136
>gi|124022160|ref|YP_001016467.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str. MIT
9303]
gi|189040708|sp|A2C6U2|RSMG_PROM3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123962446|gb|ABM77202.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9303]
Length = 247
Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPS 73
++ S E LE++ L +W+ ++NL D+WI V DSL Q P
Sbjct: 19 GWHPSSEQLEQMIALQALLRQWNARVNLTRLVEGGDYWILQVFDSLWPLQSELQNAQQPR 78
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
ID+GSGGGFPG++ +I L + L++S +K + L+ + K +V
Sbjct: 79 RCIDIGSGGGFPGLVLAIALPG---ASITLVDSVGRKTAALKAMAAKLGLTSRVTVRSER 135
Query: 133 QEAPQM----ITTCDVISARALADLDTLLEYSFPWLYQ 166
E D+ ARA++ + EY P L
Sbjct: 136 AELTGQDHCCRGLFDLAMARAVSTAPVVAEYLVPLLKP 173
>gi|269115129|ref|YP_003302892.1| methyltransferase gidB [Mycoplasma hominis]
gi|268322754|emb|CAX37489.1| Methyltransferase gidB [Mycoplasma hominis ATCC 23114]
Length = 238
Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-----FQLHPYPSIWI 76
S+E L+KL +Y L + + K NL + +E L + +
Sbjct: 19 SKEVLKKLYEYYQLIEQENSKYNLTGFYNEKLLKEAIIESILIFLDIEKNICNLTNKSVL 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+GSG GFP + I + + + E ++K+ +FL V + + E
Sbjct: 79 DIGSGAGFPILPYFIY---KQDFSLTIYEPQSKRVNFLNLVKNELKLKNIDIQKIRAEDS 135
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLY 165
I D ISARA+++L LLE S L
Sbjct: 136 NQIECFDFISARAVSELKNLLEISHHLLK 164
>gi|157363104|ref|YP_001469871.1| methyltransferase GidB [Thermotoga lettingae TMO]
gi|189040727|sp|A8F3S3|RSMG_THELT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157313708|gb|ABV32807.1| methyltransferase GidB [Thermotoga lettingae TMO]
Length = 225
Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ EKL+ + L + INL S E +H+ D VF + +D
Sbjct: 12 GIKIDDSKTEKLDSYIDLLIS--APINLTSLRDKEYAIHKHIVDI--VFPVKMLTGKLLD 67
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+GGG PG+I +I L+ES KK +L ++ + R ++ P
Sbjct: 68 VGTGGGIPGLILAILFPIN----ATLVESVRKKVMWLEKILNMLNIGNVNLLCSRAEKLP 123
Query: 137 -QMITTCDVISARALADLDTLLEYSFPW 163
+ D+++ARA+++L LLE P+
Sbjct: 124 ADKKESFDIVTARAVSELRILLELCAPF 151
>gi|13357596|ref|NP_077870.1| glucose inhibited division protein B [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|13959380|sp|Q9PRA5|RSMG_UREPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|11356855|pir||E82942 glucose inhibited division protein B UU040 [imported] - Ureaplasma
urealyticum
gi|6898987|gb|AAF30445.1|AE002103_10 glucose inhibited division protein B [Ureaplasma parvum serovar 3
str. ATCC 700970]
Length = 214
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-----IDLGSGGG 83
E + + K+++ NL + + + DSL ++ + + ID+GSG G
Sbjct: 3 FEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKLIDIGSGSG 62
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITT 141
PG++ I ++ + L+E+ K+ FL+ + Q+ + E M +
Sbjct: 63 IPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAEDLTQSMRES 119
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
D+ ++RA+A LD +LE S ++
Sbjct: 120 FDIATSRAVASLDKILEISAAFVK 143
>gi|291320116|ref|YP_003515374.1| methyltransferase GidB [Mycoplasma agalactiae]
gi|290752445|emb|CBH40416.1| Methyltransferase GidB (Glucose inhibiteddivision protein B)
[Mycoplasma agalactiae]
Length = 230
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 69/168 (41%), Gaps = 14/168 (8%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE----- 60
N + YLLN Y+ + + L + + + +K +N+ ++++ + + +
Sbjct: 1 MN--INKEYLLNKYS---KQIPLLYKYAQMIYEQNKVMNICGFDSIDEIFNQGILGSILV 55
Query: 61 --DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+++ + +D+G+G GFP + I L + +IES K+ +FL +
Sbjct: 56 FENAISEYNFDFKGKKILDIGAGAGFPSVPLLIALD--NEFELVIIESIAKRCAFLETIK 113
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + R + + D + ARAL + + + L Q
Sbjct: 114 TEFKLNLTIINDRAENINSYNSYFDYVCARALGSVVKIYLMANHHLAQ 161
>gi|148377452|ref|YP_001256328.1| methyltransferase GidB (glucose inhibiteddivision protein B)
[Mycoplasma agalactiae PG2]
gi|148291498|emb|CAL58884.1| Methyltransferase GidB (Glucose inhibiteddivision protein B)
[Mycoplasma agalactiae PG2]
Length = 231
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE-------DSL 63
+YLLN Y+ + + L + + + +K +N+ +++ + + + +++
Sbjct: 5 NKDYLLNKYS---KQIPLLYKYAQMIYEQNKVMNICGFDNIDEIFNQGILGSILVFENAI 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D+G+G GFP + I L + +IES K+ +FL + +
Sbjct: 62 SEYNFDFKGKKILDIGAGAGFPSVPLLIALD--NEFELVIIESIAKRCAFLETIKAEFKL 119
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + + D + ARAL + + + L Q
Sbjct: 120 NLTIINDRAENVNSYNSYFDYVCARALGSVVKIYLMANHHLAQ 162
>gi|86160771|ref|YP_467556.1| methyltransferase GidB [Anaeromyxobacter dehalogenans 2CP-C]
gi|123497403|sp|Q2IHR2|RSMG_ANADE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85777282|gb|ABC84119.1| 16S rRNA m(7)G-527 methyltransferase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 215
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
LE + L W++K+NL + + + +H+ DSL + +D+GSG G PGI
Sbjct: 28 LERYADRLLAWNRKVNLTAITAPAELAEKHLVDSLVLLPFVAGARTLLDVGSGAGLPGIP 87
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT--TCDVIS 146
+ + V + KK +F++ V + R + A R + P+ D +
Sbjct: 88 LACVRRDL---SVTCCDGVAKKIAFVKAVSAELDLRVRGVAVRAEGHPEREGLPRADAVV 144
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RALAD D + +L
Sbjct: 145 SRALADPDRWVPLGARYLAD 164
>gi|78357336|ref|YP_388785.1| methyltransferase GidB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|123552126|sp|Q30Z06|RSMG_DESDG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78219741|gb|ABB39090.1| 16S rRNA m(7)G-527 methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 229
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 9/144 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-----HPYPSIWIDLGSGGG 83
L + + KWS +NLV T + + DSL + + D G+G G
Sbjct: 32 LTVYLNMLQKWSAVMNLVGPRTWQPMVRTLIVDSLHLDRFLRDAVPQCGPQIWDFGAGAG 91
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTC 142
PGI + + G ++++ + K+ F++ V+ + G V R+++
Sbjct: 92 LPGIPLRM---VWQHGEYHMVDVREKRTMFMQMVLARHPLSGTFVHRARVEDFMADRAPA 148
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D++ +RA LL + Q
Sbjct: 149 DMLVSRAFMPWPELLSLLEGRIRQ 172
>gi|289705890|ref|ZP_06502269.1| 16S rRNA methyltransferase GidB [Micrococcus luteus SK58]
gi|289557375|gb|EFD50687.1| 16S rRNA methyltransferase GidB [Micrococcus luteus SK58]
Length = 216
Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + E + + L+ W RHV + V +L P ++ D+GSG G
Sbjct: 22 EALPRAEAYVAHLADTGIEWGLIGPREAPRLWERHVLNCAVVEELLPQGALVADVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ ++ + LIE ++ +L VV E D
Sbjct: 82 LPGLCLALARPDCQ---FLLIEPLERRVEWLDMVVADLGLENVDVIRGRAEQVSGNLDVD 138
Query: 144 VISARALADLDTLLEYSFPWL 164
V++ARA++ L TL+ + P L
Sbjct: 139 VVTARAVSALKTLVPLTMPML 159
>gi|22299247|ref|NP_682494.1| glucose inhibited division protein B [Thermosynechococcus elongatus
BP-1]
gi|29336654|sp|Q8DI86|RSMG_THEEB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22295429|dbj|BAC09256.1| glucose inhibited division protein B [Thermosynechococcus elongatus
BP-1]
Length = 228
Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 15/154 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--------- 72
+ + E+ + FY L ++ +NL + V DFW +H+ DSLR P
Sbjct: 25 TPQQQEQFQRFYGALLAANQGMNLTRITAVPDFWEKHLWDSLRGILPWLQPTGETLWGAK 84
Query: 73 -SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
ID+GSGGGFPG+ +I V L+E+ KK FL +
Sbjct: 85 IQQVIDIGSGGGFPGVPVAIARPDW---SVTLLEATQKKVKFLHSLGSAVGLAN--IYPE 139
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A D+ RA+ D+ Y P L
Sbjct: 140 WGRAESHGRRYDLALIRAVGDVARCCAYGLPLLR 173
>gi|294505875|ref|YP_003569933.1| Methyltransferase gidB [Salinibacter ruber M8]
gi|294342203|emb|CBH22981.1| Methyltransferase gidB [Salinibacter ruber M8]
Length = 215
Score = 74.0 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 6/140 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSIWIDLG 79
++ E E+L+ F L++++++NL+S T F RH+ + P +D G
Sbjct: 12 LTAEQREQLDRFREQLLRFNQRVNLISPETEGAFRTRHLLHCLTLTARDFPAGCTVVDWG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+GGG P I +I V ++S KK+ +R + ++ + +
Sbjct: 72 TGGGLPAIPLAICHPE---ATVVGVDSVGKKSRAVRTIARRLGLDNCFTWNGRAD--EWT 126
Query: 140 TTCDVISARALADLDTLLEY 159
+RA A L L +
Sbjct: 127 GEAHYSVSRATAPLADLWAW 146
>gi|218885951|ref|YP_002435272.1| glucose inhibited division protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756905|gb|ACL07804.1| glucose inhibited division protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 258
Score = 74.0 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-----PYPSIW 75
V + L + L +KW++ +NLV + T + + + DSL + + P
Sbjct: 27 VPEAAQKSLAGYLELLMKWNRVMNLVGTHTWQATFRTLIVDSLHLARFLRTLPLPEAPET 86
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
DLG+G G PGI + + G +L++++ K+ FL V+ + G V F R++E
Sbjct: 87 WDLGAGAGLPGIPL---RAVWQAGTYHLVDAREKRTLFLSNVLARHPLPGTVVFRGRVEE 143
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D + +RA +LE +
Sbjct: 144 FMPTRPKADCVVSRAFLPWPEVLELVHGHVAP 175
>gi|189347674|ref|YP_001944203.1| 16S rRNA methyltransferase GidB [Chlorobium limicola DSM 245]
gi|238692197|sp|B3EGW1|RSMG_CHLL2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189341821|gb|ACD91224.1| methyltransferase GidB [Chlorobium limicola DSM 245]
Length = 220
Score = 74.0 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSI 74
++ E L + L +W+KKINL+S I+HV SL + F
Sbjct: 18 EKMELTESQYELLAAYALLLEQWNKKINLISRKEDAPVVIKHVFHSLLMGLFHPFSAGEK 77
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+DLG+GGG PGI +I L++S KK + + ++++ R++
Sbjct: 78 VLDLGTGGGLPGIPLAIAWPETR---FLLVDSTGKKIAACQAMIKELGISNAVALHSRVE 134
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + D + +R +A L+ L Y++ +L +
Sbjct: 135 ELKGLT--FDTVLSRQVAQLEQLCAYTYRFLKPE 166
>gi|152990107|ref|YP_001355829.1| 16S rRNA methyltransferase GidB [Nitratiruptor sp. SB155-2]
gi|189045869|sp|A6Q1W3|RSMG_NITSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151421968|dbj|BAF69472.1| glucose inhibited division protein B [Nitratiruptor sp. SB155-2]
Length = 181
Score = 74.0 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
T EKL F L+W+K NL S + E+ + + L +D+G+G GF
Sbjct: 3 TEEKLNIFTQKLLEWNKIHNLTGSKSEEEVQENIEDALFALQFLPDTIQNALDIGTGAGF 62
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG++ +I + + L E + K+ASFL Y+ + + E + + D+
Sbjct: 63 PGLVLAIAMPKTQW---ILTEPRQKRASFLHYMKSILNLSNVIVYKKRVEQIEAV-PMDL 118
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
I++RA+ L++ S ++
Sbjct: 119 ITSRAVMKTKDLIDLSKKFITP 140
>gi|311112578|ref|YP_003983800.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa ATCC 17931]
gi|310944072|gb|ADP40366.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa ATCC 17931]
Length = 210
Score = 74.0 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ V W RHV + V + + D+GSG G PG+
Sbjct: 25 QRYVEHLATTGIERGLIGPREVPRLWARHVLNCAAVQEYIAEGASVADVGSGAGLPGLCL 84
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I + + LIE ++ +L VV+ E DV++ARA
Sbjct: 85 AIARPDL---AITLIEPLERRVIWLHEVVEDLGLENVKILRSRAEQAIGQVDADVVTARA 141
Query: 150 LADLDTLLEYSFPWLY 165
++ L L++ + P L
Sbjct: 142 VSALVGLVDITLPILR 157
>gi|332703863|ref|ZP_08423951.1| Ribosomal RNA small subunit methyltransferase G [Desulfovibrio
africanus str. Walvis Bay]
gi|332554012|gb|EGJ51056.1| Ribosomal RNA small subunit methyltransferase G [Desulfovibrio
africanus str. Walvis Bay]
Length = 233
Score = 74.0 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-----HPYPSIW 75
+ + KL + L ++W++++NLV +S+ + R V DS + P
Sbjct: 36 LDADQAGKLALYLGLLVEWNRRMNLVGASSWREVLSRLVMDSWHLADHLAELPLPAEPRS 95
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+DLG+G G PGI I G L+E + K+ FLR V K R V R++
Sbjct: 96 LDLGAGAGLPGIPLRIF---WNSGEYRLVEIREKRTIFLRVAVAKLDLPRTFVLRSRVEN 152
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D++ RA LE P L
Sbjct: 153 LGADALPADLVLGRAFKPWPEYLELVQPMLAP 184
>gi|32266985|ref|NP_861017.1| 16S rRNA methyltransferase GidB [Helicobacter hepaticus ATCC 51449]
gi|55976489|sp|Q7VG38|RSMG_HELHP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|32263037|gb|AAP78083.1| glucose inhibited division protein B [Helicobacter hepaticus ATCC
51449]
Length = 185
Score = 74.0 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
F LKW+K NL +S++E + DSL + + +D+GSGGGFP I
Sbjct: 10 FTIFGDELLKWNKIHNLTGASSIESVMEN-IFDSLYPLRFIDDFTSCMDIGSGGGFPAIP 68
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-QMITTCDVIS 146
+I LIE +NK++ FL+ ++ + +V RIQ+ P + D+I+
Sbjct: 69 LAIAKP---QSHFILIEPRNKRSCFLQNIIIQLELNNVQVRPIRIQDVPIAEVNNLDLIT 125
Query: 147 ARALADLDTLLEYSFPWLYQK 167
+RAL D L+ S +L +
Sbjct: 126 SRALMDAKELISLSRKFLKSE 146
>gi|117927028|ref|YP_867645.1| methyltransferase GidB [Magnetococcus sp. MC-1]
gi|189045857|sp|A0LE46|RSMG_MAGSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117610784|gb|ABK46239.1| 16S rRNA m(7)G-527 methyltransferase [Magnetococcus sp. MC-1]
Length = 219
Score = 74.0 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
EKL F L W+KKINL+ ST + W RH+ +S + + S +D+G+G G PG
Sbjct: 30 EKLAEFVSELLLWNKKINLIGKSTEKSIWSRHIAES-LILLPYVQGSTVLDMGTGAGLPG 88
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT--CDV 144
+ I S ++L+E KK SFL++V + + +V
Sbjct: 89 LPLQIV--SGSNIEMHLVEKDQKKVSFLKHVSANLNLKNIRIYNKQFTEKGFDGAPLVNV 146
Query: 145 ISARALADLDTLLEYSFPWL 164
+++RALA+++ L+ ++ P L
Sbjct: 147 VTSRALAEINQLVAWADPCL 166
>gi|329118277|ref|ZP_08246987.1| glucose inhibited division protein B [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465698|gb|EGF11973.1| glucose inhibited division protein B [Neisseria bacilliformis ATCC
BAA-1200]
Length = 210
Score = 73.6 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+ NL + H+ DSL + + ID+GSGGG PGI ++ +
Sbjct: 35 KWNAAFNLTALRDRAKMVSHHLLDSLTLLPYLDGAATLIDVGSGGGMPGIPAAVCRPDL- 93
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
V L ++ KK +FL+ + A E D++S+RA A+L +
Sbjct: 94 --AVTLCDANTKKTAFLQQAAIELGLDNVSVAAGRVE-KLAGKQADIVSSRAFAELADFV 150
Query: 158 EYSFPW 163
+
Sbjct: 151 SITRSL 156
>gi|300742662|ref|ZP_07072683.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa M567]
gi|300381847|gb|EFJ78409.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa M567]
Length = 210
Score = 73.6 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ V W RHV + V + + D+GSG G PG+
Sbjct: 25 QRYVEHLATTGIERGLIGPREVPRLWARHVLNCAAVQEYIAEGASVADVGSGAGLPGLCL 84
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I + + LIE ++ +L VV+ E DV++ARA
Sbjct: 85 AIARPDL---SITLIEPLERRVIWLHEVVEDLGLENVKILRSRAEQAVGQVEADVVTARA 141
Query: 150 LADLDTLLEYSFPWLY 165
++ L L++ + P L
Sbjct: 142 VSALVGLVDITLPILR 157
>gi|319788431|ref|YP_004147906.1| methyltransferase GidB [Pseudoxanthomonas suwonensis 11-1]
gi|317466943|gb|ADV28675.1| methyltransferase GidB [Pseudoxanthomonas suwonensis 11-1]
Length = 212
Score = 73.6 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W++ NL + E+ RH+ DSL + P DLG+G G PGI +I ++
Sbjct: 39 RWNRTYNLTAIRDPEEMVTRHLLDSLA-MHPYVRPGALADLGTGPGLPGIPLAIARPDVQ 97
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
V L+ES KKA FLR V++ EA I+ARAL L +L
Sbjct: 98 ---VTLVESNGKKARFLREAVRQLKLGNARVLESRAEAVAEPGAYAQITARALDTLAGIL 154
Query: 158 EYSFPWLY 165
E L
Sbjct: 155 EVGGHLLA 162
>gi|116626940|ref|YP_829096.1| methyltransferase GidB [Candidatus Solibacter usitatus Ellin6076]
gi|122251262|sp|Q01NF9|RSMG_SOLUE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116230102|gb|ABJ88811.1| methyltransferase GidB [Candidatus Solibacter usitatus Ellin6076]
Length = 210
Score = 73.6 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 3/135 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
L ++ ++ NL + + I+H+ DS+ ++L +D GSG GFPGI +
Sbjct: 27 RHLDLIVETNQHFNLTRIVSPREAAIKHIADSVIPWRLFSGAPHVVDAGSGAGFPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ L L+ES KKA F+ E +++ARA+
Sbjct: 87 LVLPETR---FTLLESTQKKARFIESAAADLGLANVEVRPDRAEDWLKTHRASIVTARAV 143
Query: 151 ADLDTLLEYSFPWLY 165
A L + L
Sbjct: 144 APLTRAVGLFAHALR 158
>gi|288573694|ref|ZP_06392051.1| methyltransferase GidB [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569435|gb|EFC90992.1| methyltransferase GidB [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 238
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 23 RETLE-KLEYFYFLFLKWSK-KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
E +E KL + + +WS K+ L + W HV DSL +L P+ +D+G+
Sbjct: 19 DERIETKLRTYSEILARWSSDKVRLTGPKDEDTIWKDHVRDSLYALELLPHSGRLVDVGT 78
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP-QM 138
GGG PG+ +I +E + L++S++KK L +V + V R ++ +
Sbjct: 79 GGGLPGLAWAICRPDLE---ITLLDSQSKKTGALESIVSELEVENVSVIWGRSEQLALEE 135
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
D+ +AR +++ + EY P +
Sbjct: 136 REIYDLAAARGVSEAGIVAEYLSPLVK 162
>gi|157737479|ref|YP_001490162.1| 16S rRNA methyltransferase GidB [Arcobacter butzleri RM4018]
gi|189039380|sp|A8EU69|RSMG_ARCB4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157699333|gb|ABV67493.1| glucose inhibited division protein B [Arcobacter butzleri RM4018]
Length = 194
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L+ N + E E F L +W NL T +D + + DSL
Sbjct: 1 MLQKLLEANNLKFEDKFYEDCEVFVKLLQQWGTIHNLSGRLTRDDIYEN-ILDSLYPLTF 59
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ D+G+G G+PG+I +I L + L+ + +F++ ++ V
Sbjct: 60 IEKYESFADIGTGAGYPGLILAIALRDTKAYLIEPRIKRVSFLNFVKATLKLDNL--VVL 117
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++E + D+I++RA+ + LL+ +
Sbjct: 118 CNRVEEVKDL--QVDLITSRAVTNTSLLLDIT 147
>gi|284929108|ref|YP_003421630.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [cyanobacterium UCYN-A]
gi|284809567|gb|ADB95272.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [cyanobacterium UCYN-A]
Length = 243
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-----VFQLHPYPSIWI 76
+ + L++ E Y + + ++NL E+FW +H+ DS+ F + I
Sbjct: 21 TEKHLDQWEELYQEIILINNQVNLTRIVKPEEFWEKHLWDSIAGVVGLPFFQYSRKMKVI 80
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAARGKVFACRIQEA 135
D+G+GGGFPG+ +I + L++ K + +FL +++ + + A +I
Sbjct: 81 DIGTGGGFPGLPINIVFPIWDFTLLDSRRKKIEVVNFLLKILELENSWALTGRAEKIAHD 140
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+ RA+ + T EY P+L
Sbjct: 141 SRFRGKYDIALIRAVGESSTCSEYILPFL 169
>gi|212550953|ref|YP_002309270.1| glucose inhibited division protein B [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549191|dbj|BAG83859.1| glucose inhibited division protein B [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 209
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSG 81
E + L+ W++K NL+S + + + RHV + S +D+G+G
Sbjct: 17 EQKVQFFALRDLYTNWNRKANLISRKDIGNLYERHVLHSLGIAQIISFCDYSTILDVGTG 76
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GGFPG+ +I ++ L++S KK L ++ K R C+ A
Sbjct: 77 GGFPGVPLAILFPNVR---FLLLDSTAKKIKILENIISKLNLRN--VKCKCMRAEYERGQ 131
Query: 142 CDVISARALADLDTLLEYS 160
D I +RA L L+ +
Sbjct: 132 FDFIISRAAMPLLELVNIT 150
>gi|254458713|ref|ZP_05072137.1| methyltransferase GidB [Campylobacterales bacterium GD 1]
gi|207084479|gb|EDZ61767.1| methyltransferase GidB [Campylobacterales bacterium GD 1]
Length = 192
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+A + + + ++ + KW+K NL + + D++
Sbjct: 3 LKAILAQDNIILPDDFFYNIQKYKEHLFKWNKIHNLTGAKDSNSIDEF-IYDAVFPVSFL 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G+G GFPG+I ++ L + LV + + F++ ++ +V
Sbjct: 62 PKAKNLLDIGTGAGFPGMILALALPDTQVTLVEPLTKRASFLQFIKADLE--LDNVRVVK 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R+++ I D++++RA+ D LL S + +K
Sbjct: 120 KRVEDMEAEI--FDIVTSRAVTDTQMLLNLSKNFRDEK 155
>gi|261749369|ref|YP_003257054.1| glucose-inhibited division protein B [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
gi|261497461|gb|ACX83911.1| glucose-inhibited division protein B [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 203
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLH 69
+ + ++ + + KL L+ W+ +NL+S T +F+ +HV +
Sbjct: 2 ELIQKYFPDLLDQQIYKLSSLKKLYAYWNAYVNLISRKTFHNFYQQHVLFCLGIAKVFTF 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +DLG+GGGFPGI SI E I + K
Sbjct: 62 FPGSCVMDLGTGGGFPGIPLSIVFPHTE-----FILVDSISKKIKIVEKIIYNLNIKNAY 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
A ++ D + +RA+A + + +
Sbjct: 117 TICIRAEKLENKFDFVVSRAVAKISKIHNW 146
>gi|15603936|ref|NP_220451.1| 16S rRNA methyltransferase GidB [Rickettsia prowazekii str. Madrid
E]
gi|6225446|sp|Q9ZE89|RSMG_RICPR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|3860627|emb|CAA14528.1| GLUCOSE INHIBITED DIVISION PROTEIN B (gidB) [Rickettsia prowazekii]
gi|292571654|gb|ADE29569.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia prowazekii Rp22]
Length = 191
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDL 78
V E +EKLE F L KW+K INL+S +T+ +FW RH+ DSL++ Q I ID+
Sbjct: 2 KVQSEIIEKLEIFQNLIKKWNKSINLISDNTIPNFWQRHILDSLQLMQYISNKEIHLIDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFPGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 62 GSGAGFPGIVLSIA----GVTKVSLIEADLRKCIFLAKASKISNNSIQIINQRIEKIE-- 115
Query: 139 ITTCDVISARALADLDTLLEYS 160
C +++ RA ++L+T+ Y+
Sbjct: 116 -IDCSILTCRAFSNLNTIFNYT 136
>gi|154486338|ref|ZP_02027745.1| hypothetical protein BIFADO_00147 [Bifidobacterium adolescentis
L2-32]
gi|154084201|gb|EDN83246.1| hypothetical protein BIFADO_00147 [Bifidobacterium adolescentis
L2-32]
Length = 247
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 37/196 (18%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D N L + +L V + L KL+ F+ + L+ V W RH+ +S
Sbjct: 4 MSDVNDELDGSPILEE--VLGDALGKLKVFHVKLAAEGEPRGLIGPRDVGIIWERHILNS 61
Query: 63 LRVFQLHP------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ D+GSGGGFPGI+ + L + L+E ++ +L
Sbjct: 62 AAIVPFIREATAKRQFKTVADIGSGGGFPGIVAAACLPDHQ---FTLVEPMERRIEWLHE 118
Query: 117 VVQKTAARGKVF-----ACRIQEAP---------------------QMITTCDVISARAL 150
V + I+ + V++ RA+
Sbjct: 119 CVDEMGLDNVSIVRSRANAVIEAVRGSNGGRKGRGEDAVDLDGNPIPVRHPFAVVTCRAV 178
Query: 151 ADLDTLLEYSFPWLYQ 166
A + L ++ P L +
Sbjct: 179 APMTKLSGWTLPLLDK 194
>gi|119026644|ref|YP_910489.1| 16S rRNA methyltransferase GidB [Bifidobacterium adolescentis ATCC
15703]
gi|189039483|sp|A1A3X4|RSMG_BIFAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118766228|dbj|BAF40407.1| methyltransferase gidB [Bifidobacterium adolescentis ATCC 15703]
Length = 249
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 37/196 (18%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D N L + +L V + L KL+ F+ + L+ V W RH+ +S
Sbjct: 6 MSDVNDELDGSPILEE--VLGDALGKLKVFHVKLAAEGEPRGLIGPRDVGIIWERHILNS 63
Query: 63 LRVFQLHP------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ D+GSGGGFPGI+ + L + L+E ++ +L
Sbjct: 64 AAIVPFIREATAKRQFKTVADIGSGGGFPGIVAAACLPDHQ---FTLVEPMERRIEWLHE 120
Query: 117 VVQKTAARGKVF-----ACRIQEAP---------------------QMITTCDVISARAL 150
V + I+ + V++ RA+
Sbjct: 121 CVDEMGLDNVSIVRSRANAVIEAVRGSNGGRKGRGEDAVDLDGNPIPVRHPFAVVTCRAV 180
Query: 151 ADLDTLLEYSFPWLYQ 166
A + L ++ P L +
Sbjct: 181 APMTKLSGWTLPLLDK 196
>gi|258593685|emb|CBE70026.1| putative Methyltransferase gidB (Glucose-inhibited division protein
B) [NC10 bacterium 'Dutch sediment']
Length = 249
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 9/168 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D + +L ++ E + + +W+ +INL + E SL
Sbjct: 22 DRSELLTRGLDRIGLQLTPAQREAFDIYLSELRRWASQINLTGLRSEEAIIREGFLRSLA 81
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
ID+GSG GFPG++ + IE + L+E + K+A+FLR +++
Sbjct: 82 HRAAFEPAPSVKAIDVGSGAGFPGLVLKMGYPDIE---IVLLEPRRKRAAFLRSTIRRLE 138
Query: 123 AR-GKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + V ARA+ + + P L
Sbjct: 139 LTGVRCIQARVEALYGDAEHQGRYAVAFARAVGPVADVARMIKPLLTP 186
>gi|254424200|ref|ZP_05037918.1| methyltransferase GidB [Synechococcus sp. PCC 7335]
gi|196191689|gb|EDX86653.1| methyltransferase GidB [Synechococcus sp. PCC 7335]
Length = 270
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 34/177 (19%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-------- 73
+ + + + Y L+ ++++NL + + FW +H+ DSL
Sbjct: 21 TSKQQQLFQDLYIQILEGNRQLNLTRITEPQAFWEKHLWDSLSGLAPWLSDIAEASKADT 80
Query: 74 ----------------------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
ID+G+GGGFPGI +I L+S+ + L+++ KK
Sbjct: 81 EAKTEVGAETIPYFANDDSAPLRMIDIGTGGGFPGIPAAIALTSL-AIDLTLVDATRKKI 139
Query: 112 SFLRYVVQKTAARGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
FL+ + Q+ A R + P+ T D+ RA+ T EY P+L
Sbjct: 140 LFLQTLCQQLGLNTTCIADRAEALGRDPEHRETYDLALIRAVGSAATCAEYVMPFLK 196
>gi|154250443|ref|YP_001411268.1| methyltransferase GidB [Fervidobacterium nodosum Rt17-B1]
gi|189039388|sp|A7HNX8|RSMG_FERNB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154154379|gb|ABS61611.1| methyltransferase GidB [Fervidobacterium nodosum Rt17-B1]
Length = 213
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E E + + + + INL + ++ DS+ + ++D+G+GGG
Sbjct: 2 EKTEIVRKYVEKLI--NSPINLTAYKDFDEAMAFLYLDSVLPVKSEDLGEFFLDIGTGGG 59
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAP---QMI 139
PG+ S++ L++S KK F++ ++ + + R +E
Sbjct: 60 VPGVFLSVEFDKK----GLLVDSICKKVHFIQQTCKELGIKKVETLCARAEELKGKGDFF 115
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D +RA++ + T+LE + P++
Sbjct: 116 EKFDSAVSRAVSKIATVLELTAPYVK 141
>gi|51245135|ref|YP_065019.1| glucose inhibited division protein B [Desulfotalea psychrophila
LSv54]
gi|81642450|sp|Q6ANR2|RSMG_DESPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50876172|emb|CAG36012.1| related to glucose inhibited division protein B [Desulfotalea
psychrophila LSv54]
Length = 217
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSST-VEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ R E+L ++ KWS+K+NL++ T + H DSL + L P + +
Sbjct: 17 GIELDRPGQERLYTYFVELKKWSQKVNLIAKGTGEAEIVENHFLDSLALLPLLPEGAGLL 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA 135
D+G+G G PG+I + + L+E + K+ SFLR++V+ +++ RI++
Sbjct: 77 DIGTGAGLPGLICKAARPDLR---LFLVEPRAKRVSFLRHIVRTLQLEGVEIYCSRIEDE 133
Query: 136 PQMITTCDV--ISARALADLDTLLEYSFPW 163
P++ + D+ I++RA++D+ L + +
Sbjct: 134 PELFASEDISYITSRAVSDISGFLAMTEGF 163
>gi|260904987|ref|ZP_05913309.1| 16S rRNA methyltransferase GidB [Brevibacterium linens BL2]
Length = 217
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ ++ W RH+ + V + + D+GSG G PGI
Sbjct: 31 QRYAQHLATTGIEWGLIGPREIDRLWTRHILNCGVVAEFIDDSDVVGDVGSGAGLPGIPI 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISAR 148
++ + V LIE ++ +L+ VV A ++ R++E V+++R
Sbjct: 91 ALLRPEAQ---VVLIEPMERRVEWLKMVVDDLALDNVRIVRARVEELVD-EEMFTVVTSR 146
Query: 149 ALADLDTLLEYSF 161
A+ + TL+E++
Sbjct: 147 AVKAMTTLIEWTH 159
>gi|242281174|ref|YP_002993303.1| methyltransferase GidB [Desulfovibrio salexigens DSM 2638]
gi|242124068|gb|ACS81764.1| methyltransferase GidB [Desulfovibrio salexigens DSM 2638]
Length = 228
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 10 LRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
L+ N + + + + L Y+ L +KW+K +NLV E + + DSL +
Sbjct: 22 LKDNTAQDEGFKAATDQARVLAYYLTLLVKWNKSMNLVGPQGWEQVFHSLIIDSLHLADF 81
Query: 69 H-----PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P + +DLG+G G PGI + + G L+ES+ K+ F+R ++
Sbjct: 82 LDSLELPSNPVTLDLGAGAGLPGIPL---RALWQAGDYRLVESREKRCIFMRTALRMMKL 138
Query: 124 -RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R VF R ++ P D+I ++A LLE+ P L ++
Sbjct: 139 PRTDVFQGRAEKIPSETLPADLILSKAFMPWKELLEFVKPMLAEQ 183
>gi|159904136|ref|YP_001551480.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str. MIT
9211]
gi|159889312|gb|ABX09526.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9211]
Length = 236
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWIDLGSGGGFPGIITSIQ 92
++W++K+NL DFWI HV DSL + ID+G+G GFPG+ +I
Sbjct: 21 IEWNEKVNLTRLLKGSDFWISHVLDSLWPLRYELNHFESSRKIIDVGTGCGFPGLAIAIA 80
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-----FACRIQEAPQMITTCDVISA 147
L E + LI+S ++K + ++ + Q +V A I ++ D+ A
Sbjct: 81 LPRSE---ITLIDSISRKTTAVKAISQTLGLGERVSVRTERAEVIGQSISFRGNYDLAVA 137
Query: 148 RALADLDTLLEYSFPWL 164
RA+A + EY P L
Sbjct: 138 RAVATSPVVAEYLIPLL 154
>gi|294790218|ref|ZP_06755376.1| 16S rRNA methyltransferase GidB [Scardovia inopinata F0304]
gi|294458115|gb|EFG26468.1| 16S rRNA methyltransferase GidB [Scardovia inopinata F0304]
Length = 254
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 48/184 (26%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---------LRVFQLHPYPSIWIDL 78
K+E F+ L+ + W RH+ +S + D+
Sbjct: 21 KMELFHKKLEDEGLIRGLIGPRDGDIIWERHILNSAALVPFIKEMLPDPETDRQVTIGDV 80
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA-- 135
G+GGGFPGI+ + + +LIE ++ +L +V V R +E
Sbjct: 81 GTGGGFPGIVLAACFPA---VSFDLIEPMERRCEWLAEMVDMLQLTNATVVRARTEELIS 137
Query: 136 ---------------------------------PQMITTCDVISARALADLDTLLEYSFP 162
+ D+++ RA+A + L + P
Sbjct: 138 KKKEFSRTSGGHVDSSRANAGRRGRKPGSRQAQSEHFNGYDIVTCRAVAPMTKLAGMTLP 197
Query: 163 WLYQ 166
L +
Sbjct: 198 LLKK 201
>gi|197124872|ref|YP_002136823.1| methyltransferase GidB [Anaeromyxobacter sp. K]
gi|238689896|sp|B4UKF8|RSMG_ANASK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|196174721|gb|ACG75694.1| methyltransferase GidB [Anaeromyxobacter sp. K]
Length = 215
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 5/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V LE + L W++K+NL + + + +H+ DSL + + +D
Sbjct: 17 GLPVDEAARALLERYADRLLAWNRKVNLTAITAPAELAEKHLVDSLVLLPVLSGARTLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G PG+ + + V + KK +F++ V + + A R + P+
Sbjct: 77 VGSGAGLPGMPLACARRDL---SVTCCDGVAKKIAFVKAVSAELDLPVRGVAVRAEGDPE 133
Query: 138 MIT--TCDVISARALADLDTLLEYSFPWLYQ 166
D + +RALAD D + +L +
Sbjct: 134 REGLPRADAVVSRALADPDRWVPVGARYLAE 164
>gi|317401628|gb|EFV82254.1| ribosomal RNA small subunit methyltransferase G [Achromobacter
xylosoxidans C54]
Length = 229
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 13/138 (9%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-------YPSIWIDLGSGGGFPGIIT 89
+W++ NL + + ++H+ DSL P+ D+GSGGG PG++
Sbjct: 43 QRWNRTYNLTAIRDPQQMLVQHLFDSLAAVGPFSEALGAPGTPAKIYDVGSGGGLPGVVL 102
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISAR 148
++ V I++ KK +F+R + A + RI+ C+++++R
Sbjct: 103 AVMRPEW---SVTCIDAVEKKTAFVRQMSGALALPNLQARHARIETLEP--AGCNIVTSR 157
Query: 149 ALADLDTLLEYSFPWLYQ 166
A A L+ + +
Sbjct: 158 AFASLEDFAMLAGRHVDN 175
>gi|220919590|ref|YP_002494894.1| methyltransferase GidB [Anaeromyxobacter dehalogenans 2CP-1]
gi|254766874|sp|B8JDK2|RSMG_ANAD2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219957444|gb|ACL67828.1| methyltransferase GidB [Anaeromyxobacter dehalogenans 2CP-1]
Length = 215
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 1/149 (0%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V LE + L W++K+NL + + + +H+ DSL + +D
Sbjct: 17 GLPVDEAARALLERYADRLLAWNRKVNLTAITAPAELAEKHLVDSLVLLPFLTGAGTLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G PGI + + + + K + + RG + +
Sbjct: 77 VGSGAGLPGIPLACARRDLSVTCCDGVAKKIAFVKAVSAELD-LPVRGVAVRAEGEPERE 135
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +RALA+ D + +L +
Sbjct: 136 GLPRADAVVSRALAEPDRWVPVGARYLAE 164
>gi|237738382|ref|ZP_04568863.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
mortiferum ATCC 9817]
gi|229420262|gb|EEO35309.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
mortiferum ATCC 9817]
Length = 233
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + + ++ L + L L+++ NL + + +H DSL +
Sbjct: 1 MREFLISGLKEIGVEYTEKKVDNLLKYLSLLLEYNSHTNLTAMRDEKLIIEKHFLDSLLL 60
Query: 66 FQLHPYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
L + ID+G+G GFPG++ +I E L++S KK FL+ V +
Sbjct: 61 QNLIKWDMKSAIDVGTGAGFPGMVLAIFN---ENIRFTLMDSIGKKTKFLQMVKDELGLE 117
Query: 124 RGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R ++ + + D+ R ++ L T+LEY P+L ++
Sbjct: 118 NVEIVTSRAEDFISDEKRESYDLGLCRGVSKLSTILEYIIPFLKEE 163
>gi|238061907|ref|ZP_04606616.1| small subunit ribosomal RNA methyltransferase G [Micromonospora sp.
ATCC 39149]
gi|237883718|gb|EEP72546.1| small subunit ribosomal RNA methyltransferase G [Micromonospora sp.
ATCC 39149]
Length = 233
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ W RH+ + V + P + +D+GSG G PG++ +I + V L+
Sbjct: 32 LIGPREAPRIWDRHLLNCAAVAERIPPDASVLDVGSGAGLPGLVLAIARPDL---TVTLV 88
Query: 105 ESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT-----TCDVISARALADLDTLL 157
E ++ SFL VV+ +VF R +EA T + D+++ARA+A LD L
Sbjct: 89 EPLARRTSFLIEVVEDLGLAKSVRVFRGRAEEAATGSTGVGPFSADIVTARAVAPLDRLA 148
Query: 158 EYSFPW 163
+ P
Sbjct: 149 AWCLPL 154
>gi|78776584|ref|YP_392899.1| glucose-inhibited division protein B [Sulfurimonas denitrificans
DSM 1251]
gi|123550792|sp|Q30TL7|RSMG_SULDN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78497124|gb|ABB43664.1| Glucose inhibited division protein [Sulfurimonas denitrificans DSM
1251]
Length = 193
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 10/164 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N L+ L + ++ F KW+K NL + + D++
Sbjct: 1 MN--LKTALLELDTELPDTFFHHIQKFKEHLFKWNKIHNLTGAKDENTIDEF-IYDAIYP 57
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
P +D+G+G GFPG+I ++ L E V L+E K+ASFL+++
Sbjct: 58 ITFLPKCKNLLDIGTGAGFPGLILAMGLPETE---VTLVEPLAKRASFLQFIKADLGLSN 114
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
KV R+Q+ P I +++++RA+ D + LLE S + K
Sbjct: 115 VKVVQKRVQDMPSEI--FEIVTSRAVIDTNMLLELSKGF-RNKD 155
>gi|289642459|ref|ZP_06474604.1| methyltransferase GidB [Frankia symbiont of Datisca glomerata]
gi|289507718|gb|EFD28672.1| methyltransferase GidB [Frankia symbiont of Datisca glomerata]
Length = 245
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 7/139 (5%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + L+ + W RH+ +S V + + +D+GSG G PGI ++
Sbjct: 25 YADLLATAGVERGLIGPREADRLWERHLLNSAVVAEAIDQAAAVVDVGSGAGLPGIPLAL 84
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITT--CDVISA 147
+ V L+E ++ FL+ V + R V R +A + T DV A
Sbjct: 85 ARPDLR---VTLLEPMQRRCLFLQEAVGRLGLEGRVTVLRGRAPDAAATVETHAFDVCLA 141
Query: 148 RALADLDTLLEYSFPWLYQ 166
RALA L+ L P +
Sbjct: 142 RALAPLERLGAMLLPMVKP 160
>gi|239617843|ref|YP_002941165.1| methyltransferase GidB [Kosmotoga olearia TBF 19.5.1]
gi|239506674|gb|ACR80161.1| methyltransferase GidB [Kosmotoga olearia TBF 19.5.1]
Length = 224
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 7/148 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
+ + E L F + K NL + + +I+HVED L + +ID+
Sbjct: 2 IELDEKKEELLTRFLKEIIS--SKHNLTAIKDFKQAYIKHVEDVLLAVRKLNLCGRYIDI 59
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
G+GGG PGI+ ++ E L++S KK + + R +E +
Sbjct: 60 GTGGGVPGIVCAVLFPEAEWY---LLDSVGKKVQEIERISLLLGLSNVHFIVGRAEEVAK 116
Query: 138 -MITTCDVISARALADLDTLLEYSFPWL 164
D RA+ D LEY P++
Sbjct: 117 GYAEFFDGAFLRAVGRADISLEYGTPFV 144
>gi|302328144|gb|ADL27345.1| methyltransferase GidB [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 264
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 13 NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLH 69
+ LL+ Y V ++TL+++ F+ L + +L + E RH D + +
Sbjct: 59 DKLLHYYGVELQQDTLKQIWEFHQLLRANNDDQDLTRLNAFETMVERHYADCTLINAYVP 118
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+P+ ID+GSG GFPGI I SI + L E + + +FL V++K +G
Sbjct: 119 KWPARMIDVGSGAGFPGIPLKIVNPSIR---LTLCEPRPNRINFLNMVIEKMGLKGIDVF 175
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ M D + +RA L+E + P +
Sbjct: 176 GHKVTSRSMTIPVDGVISRAF----ELMEKTLPRIAN 208
>gi|295106386|emb|CBL03929.1| 16S rRNA m(7)G-527 methyltransferase [Gordonibacter pamelaeae
7-10-1-b]
Length = 217
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLGSGGGF 84
E ++ + L+ ++K NL S++++ H+EDSL ++ DLGSGGGF
Sbjct: 5 ELIDLYLEKILEANEKTNLTRISSLDEARKLHIEDSLAGLEELNKAPEGLYGDLGSGGGF 64
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT-T 141
PG+ +++ G L++S KK + + V+ + + + RI++
Sbjct: 65 PGVPLALE----SGRKTVLVDSVQKKMAIVGSVLSELGIAEQVSTYGGRIEDLAHERPCA 120
Query: 142 CDVISARALADLDTLLEYSFPWL 164
++ARAL+ L L+E + P L
Sbjct: 121 FTALTARALSKLSVLMELASPLL 143
>gi|307547044|ref|YP_003899523.1| glucose-inhibited division protein B [Halomonas elongata DSM 2581]
gi|307219068|emb|CBV44338.1| glucose-inhibited division protein B [Halomonas elongata DSM 2581]
Length = 220
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ NL + E+ RH+ DS V ++ +D+G+G G PG++ +I
Sbjct: 40 KWNRAYNLTAVRAPEEMVSRHLLDSAAVAPFVTGSTL-LDVGAGPGLPGLVLAILEPERR 98
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTL 156
V L++S KK F R V + R++ + +RA A L
Sbjct: 99 ---VTLLDSNGKKVRFQRQAVMELGLTNVTPVQARVEAFEGPKEGYCEVISRAFASLGDF 155
Query: 157 LEYSFPWLYQ 166
+ S +
Sbjct: 156 VSLSADLVAD 165
>gi|323357962|ref|YP_004224358.1| S-adenosylmethionine-dependent methyltransferase [Microbacterium
testaceum StLB037]
gi|323274333|dbj|BAJ74478.1| predicted S-adenosylmethionine-dependent methyltransferase
[Microbacterium testaceum StLB037]
Length = 209
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 5/141 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+ F ++ L+ V W RH+ + + D+GSG G P
Sbjct: 20 LDLARRFTQALADHGEERGLIGPLEVPRLWTRHILN--SAVAAPLFEGQAADIGSGAGLP 77
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
GI+ +I ++ LIE ++ +L + A E + DV+
Sbjct: 78 GIVLAIARPDVQW---TLIEPMERRTVWLTEQAESLGLTNVTVARMRGEEWTGGRSFDVV 134
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+ARA++ L TLL + P +
Sbjct: 135 TARAVSALRTLLPSTAPLVRP 155
>gi|297563778|ref|YP_003682752.1| methyltransferase GidB [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848226|gb|ADH70246.1| methyltransferase GidB [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 236
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + L+ V W RH+ + V +L P + +D+GSG G PG++
Sbjct: 32 RYAELLADDGVRRGLIGPREVPRLWERHLINCAVVEELLPEGAEVVDVGSGAGLPGLVLG 91
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ I L+E ++ FL V+ E D ++ARA+
Sbjct: 92 LLRPDIRM---VLLEPLLRRTVFLNEAVEILELPNVEVRRGRAEEAHGEVYTDFVTARAV 148
Query: 151 ADLDTLLEYSFPWLYQ 166
A L L +S P L +
Sbjct: 149 APLSRLAGWSLPLLRE 164
>gi|116750027|ref|YP_846714.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
gi|193806434|sp|A0LLH7|RSMG1_SYNFM RecName: Full=Ribosomal RNA small subunit methyltransferase G 1;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 1; Short=16S rRNA m7G
methyltransferase 1
gi|116699091|gb|ABK18279.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
Length = 220
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ VS + E L L L+W+ + NL + + H+ DSL + P +
Sbjct: 17 HGIAVSPQQAEMLFEHVRLMLEWNLRSNLTRITEFDRILTAHLLDSLLPARWLPLTGKTL 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPG+ I + L+ES KK SFL+ ++ + G V R +E
Sbjct: 77 DVGTGAGFPGVPLKILHPETQMY---LLESNRKKVSFLKVLLAGLSLPGIHVLHGRWEEP 133
Query: 136 P----QMITTCDVISARAL 150
+ + RA+
Sbjct: 134 EGWFTEEDERFTAVIMRAV 152
>gi|114568074|ref|YP_755228.1| methyltransferase GidB [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317085|sp|Q0ATU7|RSMG_SYNWW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114339009|gb|ABI69857.1| methyltransferase GidB [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 214
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGFPGII 88
+ F + ++ + + NLVS ++ +H+EDS + + S +D+GSG GFPG++
Sbjct: 6 KTFKEMLIEENSRHNLVSRKSLPVELEKHIEDSRSLLNFMDLKGSRVVDIGSGAGFPGLV 65
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA--PQMITTCDVI 145
+I G L+ES KK FL+ V+ + +V RI+E ++ + D
Sbjct: 66 LAIYCPE---GEFLLLESDLKKTEFLQAVINRCGLKNCQVLRKRIEEVGRSELRNSFDFC 122
Query: 146 SARALADLDTLLEY 159
S RALA ++ +LEY
Sbjct: 123 SCRALAMMNIVLEY 136
>gi|313144942|ref|ZP_07807135.1| methyltransferase gidB [Helicobacter cinaedi CCUG 18818]
gi|313129973|gb|EFR47590.1| methyltransferase gidB [Helicobacter cinaedi CCUG 18818]
Length = 185
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ E ++ + F L+W+K NL +S +E + DSL + +D+GS
Sbjct: 2 LGDECFKQFQTFGKELLEWNKIHNLTGASCMESVLEN-IFDSLYPLKFIDEFESCMDIGS 60
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP-QM 138
GGGFP + +I + LIE + K+ASFL+ + + KV + RI+E P
Sbjct: 61 GGGFPALPLAIAKPQSQFF---LIEPRAKRASFLQNISVQLGLKNVKVHSMRIEEVPISE 117
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ +I++RAL D L+ S +L
Sbjct: 118 VNNIALITSRALMDARNLIALSRKFL 143
>gi|240047159|ref|YP_002960547.1| 16S rRNA methyltransferase GidB [Mycoplasma conjunctivae HRC/581]
gi|239984731|emb|CAT04705.1| Ribosomal RNA small subunit methyltransferase [Mycoplasma
conjunctivae]
Length = 204
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----- 63
+L + V + +LE + L + +K +NL S E W + +S+
Sbjct: 1 MLNSIKQEIKLLVGETSFSQLERYVNLIEEKNKVMNLTGFS-GEKLWKEGILESILTLNF 59
Query: 64 -RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG GFP I I +I+ + ++ES K+ FL+ V +
Sbjct: 60 VQKWTKKKENFSLVDIGSGVGFPSIPYLIFNPNID---LTIVESLQKRCDFLKLVANELG 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + R++ Q D+++ARA++ LD L++ +
Sbjct: 117 LKFNLVCDRMENVDQ---KFDILTARAVSSLDKLIKLT 151
>gi|254526589|ref|ZP_05138641.1| methyltransferase GidB [Prochlorococcus marinus str. MIT 9202]
gi|221538013|gb|EEE40466.1| methyltransferase GidB [Prochlorococcus marinus str. MIT 9202]
Length = 237
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 9 ILRANYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF- 66
+ + N + + + E + + + + K NL +D+WI V DS+ F
Sbjct: 1 MKKQNIPEEIFALITEEEINIFQELQIKIQELNNKTNLTRLIDGDDYWISQVFDSIWPFK 60
Query: 67 ---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ ++D+GSG GFPG+ +I + E L++ + K L +
Sbjct: 61 AFPNINFNNKKFLDIGSGCGFPGLAYAITHPNSEIYLIDSSKKKTDALKILIKEIN-FKN 119
Query: 124 RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++ M T ++ + RA+++ T+ EY P L ++
Sbjct: 120 NIHIINDRVENLAHRSSMRNTFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|114778890|ref|ZP_01453687.1| hypothetical protein SPV1_12110 [Mariprofundus ferrooxydans PV-1]
gi|114550859|gb|EAU53425.1| hypothetical protein SPV1_12110 [Mariprofundus ferrooxydans PV-1]
Length = 186
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++ + + +++ K +NL S ST ++F R + SL + P +D+GSG G P
Sbjct: 3 VDLCDAYVSEVMRFRKALNLTSISTHDEFVERFILPSLALLDWVPDSGRLLDIGSGMGVP 62
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
GI + S + L+E + K+A FLR++V+ +VF I P + + DV
Sbjct: 63 GIPLLLARSGL---HGLLVERRKKRAEFLRHIVRTLDLNAEVFDADINHLPSL--SADVC 117
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+ D LL +
Sbjct: 118 VARAVTDERELLTMCNQHV 136
>gi|261415517|ref|YP_003249200.1| methyltransferase GidB [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371973|gb|ACX74718.1| methyltransferase GidB [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 214
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 13 NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLH 69
+ LL+ Y V ++TL+++ F+ L + +L + E RH D + +
Sbjct: 9 DKLLHYYGVELQQDTLKQIWEFHQLLRANNDDQDLTRLNAFETMVERHYADCTLINAYVP 68
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+P+ ID+GSG GFPGI I SI + L E + + +FL V++K +G
Sbjct: 69 KWPARMIDVGSGAGFPGIPLKIVNPSIR---LTLCEPRPNRINFLNMVIEKMGLKGIDVF 125
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ M D + +RA L+E + P +
Sbjct: 126 GHKVTSRSMTIPVDGVISRAF----ELMEKTLPRIAN 158
>gi|160331514|ref|XP_001712464.1| hypothetical protein HAN_2g321 [Hemiselmis andersenii]
gi|159765912|gb|ABW98139.1| hypothetical protein HAN_2g321 [Hemiselmis andersenii]
Length = 247
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 21/184 (11%)
Query: 1 MKYCDSNSILRANYLLNTYNVS--------RETLEKLEYFYFLFLKWSKKINLVSSSTVE 52
M + N +YL N S +E +F + +K INL+S T
Sbjct: 11 MVFSKLNGKEAKSYLTKKKNFSNNLVEFFRKENTNDTFFFTEQLVLTNKYINLISKKTEF 70
Query: 53 DFWIRHVEDSLRV------FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+ + +H D+L + F+ + +D+G+G GFPG++ SI L L+ES
Sbjct: 71 NIYRKHFLDTLTIVIFFKCFEKKKKKNACVDIGTGSGFPGLLLSILLPE---SFFLLVES 127
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFP 162
KK+ F ++ + E + D ++ARA+++++ L+++S P
Sbjct: 128 IQKKSYFHGKIINFLFLNNSITLNSRIEGMGKLKEHRGNYDFLTARAVSEINPLIQFSCP 187
Query: 163 WLYQ 166
+ +
Sbjct: 188 LVKK 191
>gi|317123170|ref|YP_004103173.1| methyltransferase GidB [Thermaerobacter marianensis DSM 12885]
gi|315593150|gb|ADU52446.1| methyltransferase GidB [Thermaerobacter marianensis DSM 12885]
Length = 250
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + + NL ++ + H D +L V P + +DLGSG GFPGI
Sbjct: 34 EMVREAGARFNLTGIDRDDEALVLHYLDSLLALSVPGGWPAEGLLVDLGSGAGFPGIPLL 93
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEA---PQMITTCDVI 145
+ L G L+E++ KKA+FL VQ+ R V A R +E PQ D +
Sbjct: 94 VALG--RGWRGLLLEAQQKKAAFLADAVQRLGLAERVTVAARRAEEVGRDPQWRGQADAV 151
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+ARALA LD +LEY P L
Sbjct: 152 TARALAPLDVVLEYGLPLLRP 172
>gi|315637202|ref|ZP_07892423.1| methyltransferase GidB [Arcobacter butzleri JV22]
gi|315478508|gb|EFU69220.1| methyltransferase GidB [Arcobacter butzleri JV22]
Length = 194
Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L+ N + E E F L +W NL T +D + + DSL
Sbjct: 1 MLQKLLEANNLKFEDKFYEDCEVFVKLLQQWGTIHNLSGRLTRDDIYEN-ILDSLYPLTF 59
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ D+G+G G+PG+I +I L + L+ + +F++ ++ V
Sbjct: 60 IEKYESFADIGTGAGYPGLILAIALRDTKAYLIEPRIKRVSFLNFVKATLKLDNL--VVL 117
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++E + D+I++RA+ + LL+ +
Sbjct: 118 CNRVEEVKDL--HVDLITSRAVTNTSLLLDIT 147
>gi|240168403|ref|ZP_04747062.1| glucose-inhibited division protein B [Mycobacterium kansasii ATCC
12478]
Length = 217
Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + L+ E W RH+ + + +L +D+GSG G PG+ +
Sbjct: 13 RYADWLAGPGVERGLLGPREAERVWERHLLNCAVIGELVGAGERVVDIGSGAGLPGVPLA 72
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
+ + + L+E +++ FL VV V R ++ + + DV +R
Sbjct: 73 LARPDLR---IILLEPLLRRSEFLCAVVADLELAVDVVRGRAEDPAVRKRLGASDVAVSR 129
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S L +
Sbjct: 130 AVAPLDKLTKWSMALLKR 147
>gi|168063930|ref|XP_001783920.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664550|gb|EDQ51265.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 209
Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 19/139 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------------DLGSGGGFPGIITS 90
+NL + + RH+ DSL + + D+GSG G PGI+ +
Sbjct: 1 MNLTAVTERGAMMDRHIADSLSLLPIIEGAHAAYCKSSAGESIKVVDIGSGAGLPGIVLA 60
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MITTCDVIS 146
I + + + L+ES K+ FL + KV R ++A + D+
Sbjct: 61 IARPAWQ---LTLLESLQKRCDFLERAAEAAGLTNVKVLRSRAEDAGKDSTHREMYDIAV 117
Query: 147 ARALADLDTLLEYSFPWLY 165
ARA+A++ L E P +
Sbjct: 118 ARAVAEMRILAELCLPLVR 136
>gi|302336547|ref|YP_003801754.1| glucose inhibited division protein [Olsenella uli DSM 7084]
gi|301320387|gb|ADK68874.1| glucose inhibited division protein [Olsenella uli DSM 7084]
Length = 253
Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 6 SNSILRANY------LLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVED---- 53
N ++ ++Y L Y +S L L ++++NL T+E
Sbjct: 1 MNELMLSSYSAGLDSHLKGYGIFLSDAQRMTLLEHLMLVFDKNREMNLTRIDTMEHGLIL 60
Query: 54 -FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+ + + + ++DLG+G GFPGI +I G LI+S KKA
Sbjct: 61 HILDSLLLLPCLDHLGYKHENYFVDLGTGAGFPGIPLAIA----TGMSGLLIDSVGKKAH 116
Query: 113 FLRYVVQKTAARGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + + G++ A I+ A + D +SARA+A+L L+EY+ P L +
Sbjct: 117 AVEGFIHTLSLSGQLSAKGIRAEDLARRKAGAFDYVSARAVAELPVLVEYASPLLRK 173
>gi|300870717|ref|YP_003785588.1| methyltransferase GidB [Brachyspira pilosicoli 95/1000]
gi|300688416|gb|ADK31087.1| Methyltransferase, gidB (glucose- inhibited division protein B)
[Brachyspira pilosicoli 95/1000]
Length = 209
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y D L L + + K+ + L + ++K IN+ + ++ F H+
Sbjct: 1 MIYDDLCIELDKLSLFKD-DDNDLKKRKIIDYASLVMDYNKNINITGAKDIQTFLDEHIL 59
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + ID+GSG G P I +I + + L ESKNKK+ FL +K
Sbjct: 60 DSLLALDVFRDYDNIIDVGSGAGVPSIPLAIMYNDKK---FTLCESKNKKSDFLIIAKEK 116
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ ++ D I++RA +D+ TL+
Sbjct: 117 LHLTN--INVASKNVYELKEKYDTITSRAFSDIKTLIRI 153
>gi|310825566|ref|YP_003957924.1| ribosomal RNA small subunit methyltransferase g [Stigmatella
aurantiaca DW4/3-1]
gi|309398638|gb|ADO76097.1| Ribosomal RNA small subunit methyltransferase G [Stigmatella
aurantiaca DW4/3-1]
Length = 217
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ LKW+ K+NL + + E+ +H DSL V + +DLG+G GFPG+
Sbjct: 29 LQRLMAELLKWNAKVNLTAITAPEEVLEKHFLDSLAVLPEVEGAASLLDLGAGAGFPGLP 88
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA---RGKVFACRIQEAPQMITTCDVI 145
+ ++ V L+++ KK FL+ + RG + I +++
Sbjct: 89 LKLARPAL---AVTLVDAVGKKVGFLKAAIAALGLKEARGLHLRAEGDPEREGIPRAELL 145
Query: 146 SARALADLDTLLEYSFPWLYQ 166
ARA DL L + ++
Sbjct: 146 IARAFMDLPDWLALAPAYVRP 166
>gi|323700146|ref|ZP_08112058.1| glucose inhibited division protein [Desulfovibrio sp. ND132]
gi|323460078|gb|EGB15943.1| glucose inhibited division protein [Desulfovibrio desulfuricans
ND132]
Length = 225
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-----PYPSI 74
+++ + E L + +KW++K+NLV S + R V DSL + P +
Sbjct: 21 DLAPDRAELLAAYLDQLMKWNRKMNLVGPSDWRTVFDRLVVDSLFLADFVTGLRLPERPL 80
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
+D G+G G PGI + + G L+E + K+A+F++ V+ + VF R +
Sbjct: 81 CLDFGAGAGLPGIPLRV---LWQDGDYWLVEVREKRATFMKSVLGRLDLPATNVFLGRAE 137
Query: 134 EAPQ------MITTCDVISARALADLDTLLEYSFPWLYQ 166
+A T D+I +RA LL++ P L +
Sbjct: 138 DALDRLSRSGHQATADLILSRAFMPWQKLLDFIHPMLRR 176
>gi|330470827|ref|YP_004408570.1| 16S rRNA methyltransferase GidB [Verrucosispora maris AB-18-032]
gi|328813798|gb|AEB47970.1| 16S rRNA methyltransferase GidB [Verrucosispora maris AB-18-032]
Length = 236
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ W RH+ + V +L P + ID+GSG G PG++ +I ++ V L+
Sbjct: 39 LIGPREAPRIWDRHLLNCAVVGELIPTDATVIDVGSGAGLPGLVLAIARPDLQ---VTLL 95
Query: 105 ESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTC--DVISARALADLDTLLEYS 160
E ++ +FL V +V R +E DV++ARA+A LD L +
Sbjct: 96 EPLARRTTFLTEAVDALGLEDSVQVLRGRAEEVAAGPDPVRGDVVTARAVAPLDRLAAWC 155
Query: 161 FPW 163
P
Sbjct: 156 LPL 158
>gi|124268970|ref|YP_001022974.1| 16S rRNA methyltransferase GidB [Methylibium petroleiphilum PM1]
gi|166224598|sp|A2SMF0|RSMG_METPP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|124261745|gb|ABM96739.1| glucose inhibited division protein B [Methylibium petroleiphilum
PM1]
Length = 221
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLR-----VFQLHPYPSIWIDLGSGGGFPGIITS 90
+W++ NL + +H+ DSL Q +D+GSG G PG+ +
Sbjct: 41 IDRWNRVYNLTAVREPAQMLTQHLLDSLAVVAPLRRQTRATAIALLDVGSGAGLPGVAIA 100
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ I V+ +++ +KKASF+R V + + R++ + DVI++RA
Sbjct: 101 VACPEI---HVSCVDTVSKKASFIRQVGVELGLTHFQALHARVESLAS--SNFDVITSRA 155
Query: 150 LADLDTLLEYSF 161
A L + +
Sbjct: 156 FASLADFVTLTE 167
>gi|210634759|ref|ZP_03298287.1| hypothetical protein COLSTE_02214 [Collinsella stercoris DSM 13279]
gi|210158699|gb|EEA89670.1| hypothetical protein COLSTE_02214 [Collinsella stercoris DSM 13279]
Length = 256
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGGGFPGIITSIQL 93
L + ++ +NL + + + HV DSL + P D+G+G GFPGI ++
Sbjct: 53 LVNQVNQYMNLTRIKDIHEALVLHVVDSLALTCDLPIEPERFLDMGTGAGFPGIPFAVY- 111
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP-QMITTCDVISARALA 151
G L++S KK + + + + R + + DV+ ARA+
Sbjct: 112 ---TGCEGILLDSVRKKVNAVNAFIDELGISNAHSVHERCESYALNEAASFDVVFARAVG 168
Query: 152 DLDTLLEYSFPWLYQ 166
++ ++EY P+L
Sbjct: 169 QMNLIVEYGAPFLED 183
>gi|308179185|ref|YP_003918591.1| glucose-inhibited division protein B [Arthrobacter arilaitensis
Re117]
gi|307746648|emb|CBT77620.1| glucose-inhibited division protein B [Arthrobacter arilaitensis
Re117]
Length = 213
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 3/140 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+ + + + L+ V W RHV + + ++ + D+GSG G P
Sbjct: 23 LDLAKRYVEHLATSGIERGLLGPREVPRLWSRHVLNCAVIEEVMEKDAEVADVGSGAGLP 82
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G+ +I + ++ + LIE ++ +L V+ E + +
Sbjct: 83 GLCLAIARADLK---LTLIEPLERRCIWLSEVIDDLGLTNVTVMRGRAEQMVDVVNARYV 139
Query: 146 SARALADLDTLLEYSFPWLY 165
+ARA++ L L + P L+
Sbjct: 140 TARAVSALTNLAGLTIPLLH 159
>gi|16331741|ref|NP_442469.1| 16S rRNA methyltransferase GidB [Synechocystis sp. PCC 6803]
gi|3122154|sp|Q55787|RSMG_SYNY3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1001702|dbj|BAA10539.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803]
Length = 264
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-----FQLHPYPSIWIDL 78
E +E + Y L + ++NL + DF +H+ DSL + + ID+
Sbjct: 40 EQIEAMVKLYQGVLVGNARLNLTRITAPLDFLEKHLWDSLAGVLLSDHSRNCPQARVIDI 99
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+GGGFPG+ ++ V L++S +KK ++L + + + A +
Sbjct: 100 GTGGGFPGLPVALVWPQW---SVALLDSTHKKINYLEELGHRLGLANLAYLVARAEAVGN 156
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
PQ + D+ RA+ + EY+ P +
Sbjct: 157 QPQHRSQYDLALIRAVGEGVVCAEYALPLVK 187
>gi|153827711|ref|ZP_01980378.1| methyltransferase GidB [Vibrio cholerae MZO-2]
gi|149737814|gb|EDM52719.1| methyltransferase GidB [Vibrio cholerae MZO-2]
Length = 139
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DS V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDS-LVVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI +I E L++S K+ FL+ V+ + R++E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFD 131
Query: 137 QM 138
Sbjct: 132 PE 133
>gi|157827959|ref|YP_001494201.1| 16S rRNA methyltransferase GidB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|166224609|sp|A8GQL8|RSMG_RICRS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157800440|gb|ABV75693.1| glucose-inhibited division protein B [Rickettsia rickettsii str.
'Sheila Smith']
Length = 191
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 63 SGAGLPGIVLSIA----GVAQVSLIEADLRKCIFLEKASKISNNNVQIINQRIEKVE--- 115
Query: 140 TTCDVISARALADLDTLLE 158
C +++ RA ++L+T+
Sbjct: 116 IDCSILTCRAFSNLNTIFN 134
>gi|296141902|ref|YP_003649145.1| methyltransferase GidB [Tsukamurella paurometabola DSM 20162]
gi|296030036|gb|ADG80806.1| methyltransferase GidB [Tsukamurella paurometabola DSM 20162]
Length = 239
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + + L+ V W RHV + + +L +D+GSG G PGI
Sbjct: 39 EEYAHVLATDGVVRGLIGPREVPRLWERHVLNCAVLGELVEAGETLVDVGSGAGLPGIPV 98
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I +E V L+E ++A FL +V R +E Q D +++
Sbjct: 99 AIARPDVE---VILVEPLLRRAVFLEEFCGPRLPNVRVVRGRAEERSVVQAAGGADAVTS 155
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA++ L +S P L +
Sbjct: 156 RAVSGFPKLAPWSAPLLRE 174
>gi|224438515|ref|ZP_03659435.1| glucose-inhibited division protein B [Helicobacter cinaedi CCUG
18818]
Length = 198
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 6/157 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ + + E ++ + F L+W+K NL +S +E + DSL +
Sbjct: 4 LQDKLQQHRIMLGDECFKQFQTFGKELLEWNKIHNLTGASCMESVLEN-IFDSLYPLKFI 62
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGGFP + +I + LIE + K+ASFL+ + + KV
Sbjct: 63 DEFESCMDIGSGGGFPALPLAIAKPQSQFF---LIEPRAKRASFLQNISVQLGLKNVKVH 119
Query: 129 ACRIQEAP-QMITTCDVISARALADLDTLLEYSFPWL 164
+ RI+E P + +I++RAL D L+ S +L
Sbjct: 120 SMRIEEVPISEVNNIALITSRALMDARNLIALSRKFL 156
>gi|289209756|ref|YP_003461822.1| methyltransferase GidB [Thioalkalivibrio sp. K90mix]
gi|288945387|gb|ADC73086.1| methyltransferase GidB [Thioalkalivibrio sp. K90mix]
Length = 209
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+E L + +W++ NL + + + RH+ DSL + + + + +D+G+G G P
Sbjct: 24 IEALAIYLEQLGRWNRVHNLTAVRDPQQWIPRHILDSLTL-RPYLHGDRILDVGTGAGLP 82
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV 144
G + + + L++S K+ FLR V+ R + RI++
Sbjct: 83 GFVLAACERRRDFC---LLDSAAKRIRFLRNVIGLAGLSRVEAVHMRIEDFRP-AAPYTT 138
Query: 145 ISARALADLDTLLEYSFP 162
+ ARA ++ P
Sbjct: 139 VLARAFKAPADMVARVAP 156
>gi|315420679|gb|ADU15872.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E ++ FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L+++S P +
Sbjct: 138 AVAALDKLMKWSMPLIRP 155
>gi|165932647|ref|YP_001649436.1| 16S rRNA methyltransferase GidB [Rickettsia rickettsii str. Iowa]
gi|189040816|sp|B0BW04|RSMG_RICRO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|165907734|gb|ABY72030.1| methyltransferase [Rickettsia rickettsii str. Iowa]
Length = 192
Score = 71.3 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 4 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 63
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 64 SGAGLPGIVLSIA----GVAQVSLIEADLRKCIFLEKASKISNNNVQIINQRIEKVE--- 116
Query: 140 TTCDVISARALADLDTLLE 158
C +++ RA ++L+T+
Sbjct: 117 IDCSILTCRAFSNLNTIFN 135
>gi|47459402|ref|YP_016264.1| glucose-inhibited division protein B [Mycoplasma mobile 163K]
gi|55976418|sp|Q6KH77|RSMG_MYCMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|47458732|gb|AAT28053.1| glucose inhibited division protein b [Mycoplasma mobile 163K]
Length = 225
Score = 71.3 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+ + + + E KLE F L +W+KKINL E+ W + +S F+
Sbjct: 19 MKTNSEICKELVSNPEKFNKLEQFVSLVEEWNKKINLTGF-EGENLWKEGINESFFCFEK 77
Query: 68 -------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
W+D+GSG GFP I +I I +IES +K+ FL V +K
Sbjct: 78 ILETKNLNDFENKSWVDIGSGAGFPIIPFAIIYPKINFY---IIESNSKRVRFLELVNEK 134
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ K+F R + ++ D +SARA+A LD L++Y Q
Sbjct: 135 LNLKIKIFNTRAENFSEL--KFDFVSARAVAHLDLLIKYFMKITKQ 178
>gi|15639931|ref|NP_219382.1| glucose-inhibited division protein B (gidB) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189026169|ref|YP_001933941.1| glucose-inhibited division protein B [Treponema pallidum subsp.
pallidum SS14]
gi|4033391|sp|O66106|RSMG_TREPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|238689352|sp|B2S4I3|RSMG_TREPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|2988418|gb|AAC08056.1| gidB homolog [Treponema pallidum]
gi|3323268|gb|AAC65903.1| glucose-inhibited division protein B (gidB) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189018744|gb|ACD71362.1| glucose-inhibited division protein B [Treponema pallidum subsp.
pallidum SS14]
gi|291060301|gb|ADD73036.1| 16S rRNA methyltransferase GidB [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 222
Score = 71.3 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 4/128 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + ++ + +LV + E+ H+ DSL + D+GSG G PGI
Sbjct: 30 LKQYLEELILFNTRAHLVHVTHTEELITHHLLDSLSAWPHFTNARAIADIGSGAGLPGIP 89
Query: 89 TSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVIS 146
+ L+ + LIE + K+ +FL + A ++ + D I+
Sbjct: 90 LACALALYAPETELTLIERREKRIAFLENACARLALPHLRIVHADAHDLTPYT--YDAIT 147
Query: 147 ARALADLD 154
RAL L+
Sbjct: 148 FRALCPLN 155
>gi|284097363|ref|ZP_06385487.1| Glucose inhibited division protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283831128|gb|EFC35114.1| Glucose inhibited division protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 219
Score = 71.3 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLGSGG 82
T+EK ++ +KW++K NL E+ DSL + +D+GSG
Sbjct: 26 TVEKFVFYLQELMKWNEKTNLTGHKQEEEIIGNLFIDSLACTMVFSSDTACSILDIGSGA 85
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE---APQM 138
GFPGI ++ + V L+E KK +FL +V+ +V ACRI+E P+
Sbjct: 86 GFPGIPMALVSPQQD---VTLLEPNLKKVAFLHHVIGSLGLKNVRVEACRIEECSKKPEY 142
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
D + +AL D L Y P L +
Sbjct: 143 DKKFDWVFMKAL-RFDVGLAYVTPILSE 169
>gi|53802709|ref|YP_112543.1| glucose-inhibited division protein B [Methylococcus capsulatus str.
Bath]
gi|81823728|sp|Q60CS4|RSMG_METCA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53756470|gb|AAU90761.1| glucose-inhibited division protein B [Methylococcus capsulatus str.
Bath]
Length = 205
Score = 71.3 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ +L + + H+ DSL + + +D+G+G G PGI +I
Sbjct: 30 KWNRVYSLTAIEDPCEGVRLHLLDSLSIASF-LHGRRVLDVGTGPGLPGIPLAIVQPERR 88
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++ KK F+R V + V E+ D + ARA A L +
Sbjct: 89 ---FVLLDCNAKKIRFVRQAVIELGLANVVPVQARIESFTDAEGFDCVLARAYASLAEIW 145
Query: 158 EYSFPWLY 165
+ P L
Sbjct: 146 TDAAPLLR 153
>gi|315420687|gb|ADU15876.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 71.3 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G P + +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPCVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E ++ FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|313671979|ref|YP_004050090.1| methyltransferase gidb [Calditerrivibrio nitroreducens DSM 19672]
gi|312938735|gb|ADR17927.1| methyltransferase GidB [Calditerrivibrio nitroreducens DSM 19672]
Length = 198
Score = 71.3 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+ N +V+ EKL +FY +L + NL S E F+I+H DS+ F+ H
Sbjct: 2 IDNYISVTDLQAEKLAHFY--YLHLNATFNLTSIKDREQFYIKHFLDSIYFFKNHTPSFN 59
Query: 75 W-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D+GSGGGFPG++ +I E L I+ K + F + + + V RI+
Sbjct: 60 TLCDIGSGGGFPGVVIAIFYPDAEIFLCESIKKKAEFLKFAAH--ELSLKNIVVLNSRIE 117
Query: 134 EAPQMITTCDVISARALADLDTLLEYS 160
E D +AR +A + +L+ S
Sbjct: 118 ELKSYR--FDFFTARGVAKVLDILKKS 142
>gi|291278441|ref|YP_003495276.1| glucose inhibited division protein B [Deferribacter desulfuricans
SSM1]
gi|290753143|dbj|BAI79520.1| glucose inhibited division protein B [Deferribacter desulfuricans
SSM1]
Length = 204
Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
Query: 21 VSRET-LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDL 78
S ET +EKL+ FY L + KINL + ++F+I+H DSL +F+ + + +D+
Sbjct: 12 FSDETLIEKLDIFYDL--HKNAKINLTAIKYYDEFYIKHYLDSLYIFKTNKFSFDTLMDI 69
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
GSGGGFPGI ++ + V L+ES +KK +FL+ + ++ R +
Sbjct: 70 GSGGGFPGIPIALLYPEKK---VYLVESISKKINFLKEAIGVLKIKNVELINDRCENLKG 126
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ D+I+AR +A ++ +L+++
Sbjct: 127 INI--DMITARGVASVNKILKWT 147
>gi|309808177|ref|ZP_07702087.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
01V1-a]
gi|308168558|gb|EFO70666.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
01V1-a]
Length = 194
Score = 70.9 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
++ ++ D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 4 IIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQL 60
Query: 122 AA-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 61 GLDNITLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 108
>gi|291297417|ref|YP_003508815.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
gi|290472376|gb|ADD29795.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
Length = 242
Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGG 83
L + F+ L ++ +NL + E +H DSL + + S ID+G+G G
Sbjct: 26 LPQFALFFELLTTVNQNLNLTAIRDEEGIIYKHFADSLSCLRYAGFASGLSVIDVGTGAG 85
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MI 139
FPG+ +I S I+ +L+++ KK F+ V Q A + R +E +
Sbjct: 86 FPGLPLAIVRSDIQ---FDLLDATKKKIEFVAKVAQTLALVNTQALWGRSEELGRQVVKR 142
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
T RA+A L T E + P +
Sbjct: 143 ETYGAALTRAVASLATAAELTLPLV 167
>gi|148825127|ref|YP_001289881.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
F11]
gi|148723654|gb|ABR08279.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis F11]
Length = 224
Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E + FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLHRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|332186973|ref|ZP_08388714.1| 16S rRNA methyltransferase GidB [Sphingomonas sp. S17]
gi|332012983|gb|EGI55047.1| 16S rRNA methyltransferase GidB [Sphingomonas sp. S17]
Length = 204
Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLG 79
+ K+++F L + + + NL++ ST+ W RH DSL++ WID+G
Sbjct: 14 FGEDAAAKIDWFLNLVIVENDQQNLIAPSTIATIWARHALDSLQLIPLADRADGQWIDIG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQ 137
+GGGFPG++ ++ V L+E + ++A FLR + R V A +I+
Sbjct: 74 TGGGFPGMVVALAWPGQ----VALVEPRKRRAEFLRDCAETLGVADRVTVHASKIESVQ- 128
Query: 138 MITTCDVISARALADLDTLLEYSFP 162
D+ISARA+A ++ LL +
Sbjct: 129 --AKADIISARAVATVENLLRAAAH 151
>gi|256827811|ref|YP_003151770.1| glucose-inhibited division protein B [Cryptobacterium curtum DSM
15641]
gi|256583954|gb|ACU95088.1| glucose-inhibited division protein B [Cryptobacterium curtum DSM
15641]
Length = 225
Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIW 75
Y +S +E + L+ +KK+NL + + + H+ED +
Sbjct: 2 QYEISSHKQACMEQYLKAVLEVNKKVNLTRIDSFKQGLLLHIEDSLGGLPEFMDALLGPA 61
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV---FACRI 132
+DLGSGGGFPG+ S+ + L++S KK +R ++ +
Sbjct: 62 LDLGSGGGFPGVPLSLAA----ERPIVLLDSVEKKVKAVRTILSDLNLGSSISAQVGRAE 117
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ A + ++ V+ ARA++ L +L E + P L+
Sbjct: 118 ERALKSPSSFSVVVARAVSSLPSLCELASPLLHN 151
>gi|325295305|ref|YP_004281819.1| ribosomal RNA small subunit methyltransferase G [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065753|gb|ADY73760.1| Ribosomal RNA small subunit methyltransferase G [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 208
Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED------SLRVFQLH 69
LN ++ + +K E + L KW K+IN+ S + ++ +H D + +++
Sbjct: 12 LNEIDLFEKEYKKFERYRELLKKWGKRINITSILSDKEIEEKHFFDSLLGLKAFKLYGFD 71
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ + D+GSGGGFPG+ +I +I+ +LIES++K+ FL V ++ KV
Sbjct: 72 YHNKLLGDVGSGGGFPGVPLAI---TIQNSTFDLIESRHKRCVFLEQVKRELELPNVKVL 128
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++ + D++ RA+ D ++ + L +
Sbjct: 129 CTRVESIDR---NYDMLLMRAVEDPIEAIKITKHLLEK 163
>gi|145351446|ref|XP_001420088.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580321|gb|ABO98381.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 15/133 (11%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI--------DLGSGGGFPGIITSIQLSSI 96
L +++ E+ H D+L + ++ S I D+GSG G PGI +I
Sbjct: 2 LTGATSAEEVLESHASDALALLKVFDDASETIGSDATRVLDVGSGAGLPGIPLAIARPGW 61
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA---PQMITTCDVISARALAD 152
L+++ K+ +FL ++ V R ++ + + DV++ARA+A+
Sbjct: 62 R---FTLLDTLRKRTNFLEATTREIGLTNVDVVWGRAEDLGRDEKWRESFDVVTARAVAE 118
Query: 153 LDTLLEYSFPWLY 165
L L E+ P
Sbjct: 119 LRVLAEFCVPLAR 131
>gi|289810085|ref|ZP_06540714.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 123
Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V + +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+G+G G PGI +I L L++S K+ FLR V +
Sbjct: 74 VGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLEN 118
>gi|26554254|ref|NP_758188.1| glucose-inhibited division protein GidB [Mycoplasma penetrans HF-2]
gi|29336687|sp|Q8EUW9|RSMG_MYCPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|26454263|dbj|BAC44592.1| glucose-inhibited division protein GidB [Mycoplasma penetrans HF-2]
Length = 237
Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 14/167 (8%)
Query: 10 LRANYLLNTYNV------SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ L+ V S E K+ + + +K NL E+ + ++ +S+
Sbjct: 1 MNLKDLIKLLEVKFPQIDSNEVESKITIYKNYLQQENKIHNLTRLDKEEEIYQKYFYESI 60
Query: 64 RVFQLHPYPSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
F + + I D+GSG G PGI I I + ++ES KK +FL +V K
Sbjct: 61 LNFHNDLFDNKNINLLDIGSGSGVPGIFLKILFPHIN---LYIVESNTKKVNFLNNLVDK 117
Query: 121 TAARGKVF--ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
I D+I+ RA+A+L LLE SFP L
Sbjct: 118 LELENVFISNQRCEDYIKDKIEFFDLITCRAVAELRILLELSFPGLK 164
>gi|215405977|ref|ZP_03418158.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
02_1987]
gi|215448266|ref|ZP_03435018.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
T85]
gi|289747763|ref|ZP_06507141.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 02_1987]
gi|289760092|ref|ZP_06519470.1| ribosomal RNA small subunit methyltransferase G [Mycobacterium
tuberculosis T85]
gi|294995601|ref|ZP_06801292.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis 210]
gi|289688291|gb|EFD55779.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 02_1987]
gi|289715656|gb|EFD79668.1| ribosomal RNA small subunit methyltransferase G [Mycobacterium
tuberculosis T85]
gi|326905752|gb|EGE52685.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis W-148]
Length = 224
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L++ ++ FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLDPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|315420677|gb|ADU15871.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E ++ FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|218755711|ref|ZP_03534507.1| glucose-inhibited division protein B [Mycobacterium tuberculosis GM
1503]
gi|289764110|ref|ZP_06523488.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis GM 1503]
gi|297636606|ref|ZP_06954386.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis KZN
4207]
gi|289711616|gb|EFD75632.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis GM 1503]
gi|315420683|gb|ADU15874.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
gi|328460697|gb|AEB06120.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis KZN 4207]
Length = 224
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E ++ FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|15843553|ref|NP_338590.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis
CDC1551]
gi|31795092|ref|NP_857585.1| 16S rRNA methyltransferase GidB [Mycobacterium bovis AF2122/97]
gi|121635905|ref|YP_976128.1| 16S rRNA methyltransferase GidB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|121639830|ref|YP_980054.1| 16S rRNA methyltransferase GidB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148663786|ref|YP_001285309.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis H37Ra]
gi|167969457|ref|ZP_02551734.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
H37Ra]
gi|215413847|ref|ZP_03422512.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
94_M4241A]
gi|215425181|ref|ZP_03423100.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
T92]
gi|215432900|ref|ZP_03430819.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
EAS054]
gi|219555766|ref|ZP_03534842.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
T17]
gi|224992325|ref|YP_002647015.1| glucose-inhibited division protein B [Mycobacterium bovis BCG str.
Tokyo 172]
gi|254233401|ref|ZP_04926727.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis C]
gi|254366455|ref|ZP_04982499.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis str. Haarlem]
gi|260184848|ref|ZP_05762322.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis CPHL_A]
gi|260198979|ref|ZP_05766470.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis T46]
gi|260203132|ref|ZP_05770623.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis K85]
gi|289441362|ref|ZP_06431106.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis T46]
gi|289445520|ref|ZP_06435264.1| chromosome partitioning protein parA [Mycobacterium tuberculosis
CPHL_A]
gi|289567876|ref|ZP_06448103.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T17]
gi|289572571|ref|ZP_06452798.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis K85]
gi|289748457|ref|ZP_06507835.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T92]
gi|289756054|ref|ZP_06515432.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis EAS054]
gi|298527391|ref|ZP_07014800.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 94_M4241A]
gi|306778283|ref|ZP_07416620.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu001]
gi|306778813|ref|ZP_07417150.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu002]
gi|306786840|ref|ZP_07425162.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu003]
gi|306786969|ref|ZP_07425291.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu004]
gi|306791524|ref|ZP_07429826.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu005]
gi|306795589|ref|ZP_07433891.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu006]
gi|306801564|ref|ZP_07438232.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu008]
gi|306805773|ref|ZP_07442441.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu007]
gi|306970170|ref|ZP_07482831.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu009]
gi|306974402|ref|ZP_07487063.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu010]
gi|307082110|ref|ZP_07491280.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu011]
gi|307086721|ref|ZP_07495834.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu012]
gi|38257378|sp|P59964|RSMG_MYCBO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189045861|sp|A1KEG3|RSMG_MYCBP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189045866|sp|A5U9P7|RSMG_MYCTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13883931|gb|AAK48404.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
CDC1551]
gi|31620690|emb|CAD96136.1| PROBABLE GLUCOSE-INHIBITED DIVISION PROTEIN B GID [Mycobacterium
bovis AF2122/97]
gi|121491552|emb|CAL70009.1| Probable glucose-inhibited division protein B GID [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|121495478|emb|CAL73967.1| Probable glucose-inhibited division protein B gid [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124603194|gb|EAY61469.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis C]
gi|134151967|gb|EBA44012.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis str. Haarlem]
gi|148507938|gb|ABQ75747.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
H37Ra]
gi|224775441|dbj|BAH28247.1| glucose-inhibited division protein B [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289414281|gb|EFD11521.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis T46]
gi|289418478|gb|EFD15679.1| chromosome partitioning protein parA [Mycobacterium tuberculosis
CPHL_A]
gi|289537002|gb|EFD41580.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis K85]
gi|289541629|gb|EFD45278.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T17]
gi|289689044|gb|EFD56473.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T92]
gi|289696641|gb|EFD64070.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis EAS054]
gi|298497185|gb|EFI32479.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 94_M4241A]
gi|308213433|gb|EFO72832.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu001]
gi|308328150|gb|EFP17001.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu002]
gi|308328612|gb|EFP17463.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu003]
gi|308336267|gb|EFP25118.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu004]
gi|308339873|gb|EFP28724.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu005]
gi|308343885|gb|EFP32736.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu006]
gi|308347669|gb|EFP36520.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu007]
gi|308351587|gb|EFP40438.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu008]
gi|308352294|gb|EFP41145.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu009]
gi|308356297|gb|EFP45148.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu010]
gi|308360184|gb|EFP49035.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu011]
gi|308363871|gb|EFP52722.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu012]
gi|315420675|gb|ADU15870.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
gi|323717335|gb|EGB26540.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis CDC1551A]
Length = 224
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E ++ FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|317126735|ref|YP_004100847.1| 16S rRNA m(7)G-527 methyltransferase [Intrasporangium calvum DSM
43043]
gi|315590823|gb|ADU50120.1| 16S rRNA m(7)G-527 methyltransferase [Intrasporangium calvum DSM
43043]
Length = 300
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 6/141 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---YPSIWIDLGSGGGFPG 86
E F + L+ W RHV + V + P ID+GSG G PG
Sbjct: 67 EEFVTILADTGISHGLIGPREAPRLWDRHVLNCGLVHHVIPVGTPGQRVIDIGSGAGLPG 126
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ +I +E V+L+E ++ +L V + V E+ + ++
Sbjct: 127 LVLAIARPDLE---VHLVEPLARRTGWLSGVTARLELENVVIHTARAESMWDRISAPWVT 183
Query: 147 ARALADLDTLLEYSFPWLYQK 167
ARA++ + L ++ P L +
Sbjct: 184 ARAVSGILQLAHWTLPLLEPR 204
>gi|306824001|ref|ZP_07457375.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium ATCC
27679]
gi|309801963|ref|ZP_07696077.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium
JCVIHMP022]
gi|304552999|gb|EFM40912.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium ATCC
27679]
gi|308221411|gb|EFO77709.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium
JCVIHMP022]
Length = 249
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 55/176 (31%), Gaps = 40/176 (22%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL------HPYPSIWIDLG 79
L KL F+ + + L+ V W RH+ +S + D+G
Sbjct: 22 LVKLRIFHDKLAQEGEPRGLIGPRDVSIIWERHILNSAAIVPFVREATVRRQFKTVADIG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
SGGGFPGI+ + L L+E ++ +L V V R
Sbjct: 82 SGGGFPGIVAAACLPD---HRFTLVEPMERRVEWLNECVNDMGLDNVTVVRSRANAMIDA 138
Query: 139 IT------------------------------TCDVISARALADLDTLLEYSFPWL 164
I V++ RA+A + L ++ P L
Sbjct: 139 IRGSKTSRKNRGAISHTTPVLDLDGNPIAISHPFAVVTCRAVAPMTKLSGWTLPLL 194
>gi|303233445|ref|ZP_07320113.1| putative 16S rRNA methyltransferase GidB [Atopobium vaginae
PB189-T1-4]
gi|302480453|gb|EFL43545.1| putative 16S rRNA methyltransferase GidB [Atopobium vaginae
PB189-T1-4]
Length = 324
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS------- 73
VS + L Y L ++ +K INL + I H DSL V H
Sbjct: 82 VSNAQITALYKHYSLLVETNKSINLTRITEPLAALILHYVDSLFVVHAHNTLCATGMIVR 141
Query: 74 --------------------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+IDLG+G GFPGI ++ + G L++S KK +
Sbjct: 142 GTAGSEASSALQQISHGSLVSFIDLGTGAGFPGIPFAL----LTGKSGLLVDSVKKKIAC 197
Query: 114 LRYVVQKTAARGKVFAC--RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + V R ++ P + +I ARA+A + TLLEY+ P L +
Sbjct: 198 VSSFIDALDLSSSVTTSSMRFEDLPSLGYKTPLIIARAVAPIRTLLEYAAPLLTR 252
>gi|218670489|ref|ZP_03520160.1| glucose-inhibited division protein B [Rhizobium etli GR56]
Length = 156
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 57/105 (54%), Positives = 80/105 (76%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++FQ++P P W+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T A
Sbjct: 2 QIFQIYPEPVRWVDLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNA 61
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
RG V A RI++A I CD ISARALADLD L+ Y+ PW+ K+
Sbjct: 62 RGSVHAIRIEDAHAEIGECDAISARALADLDGLIGYAAPWMLGKE 106
>gi|296395441|ref|YP_003660325.1| methyltransferase GidB [Segniliparus rotundus DSM 44985]
gi|296182588|gb|ADG99494.1| methyltransferase GidB [Segniliparus rotundus DSM 44985]
Length = 228
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L+ E W RH+ +S V +L P + DLGSG G PGI +
Sbjct: 23 AYAEWLADVGVAAGLIGPREAERLWERHILNSAAVAELIPAGAHAADLGSGAGLPGIPIA 82
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ--EAPQMITTCDVISAR 148
I S + + L+E ++ ++ ++ T+ V R + EA + + V+ +R
Sbjct: 83 IARSDVR---LTLVEPLARRVDPVQQFLRGTSLDVGVLRARAESAEAREHLAPIPVVLSR 139
Query: 149 ALADLDTLLEYSFPWL 164
A+A LDTL +S P L
Sbjct: 140 AVAALDTLARWSSPLL 155
>gi|169632024|ref|YP_001705673.1| methyltransferase GidB (glucose-inhibited division protein B)
[Mycobacterium abscessus ATCC 19977]
gi|169243991|emb|CAM65019.1| Methyltransferase GidB (glucose-inhibited division protein B)
[Mycobacterium abscessus]
Length = 234
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + + + L+ W RH+ +S + +L ID+GSG G
Sbjct: 19 ERLARAVEYVAALATIGVERGLIGPRETGRLWGRHILNSAVLGELLEAGERVIDVGSGAG 78
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMIT 140
PGI I + + L+E ++ FLR ++++ V R +E +
Sbjct: 79 LPGIPLGIARPDVG---IVLVEPMLRRTEFLREMIEQLGLTNVSVVRGRAEEPAVIAEVG 135
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D +++RA+A LD + +S P
Sbjct: 136 GADAVTSRAVAALDKIARWSLPLTR 160
>gi|15611055|ref|NP_218436.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis H37Rv]
gi|7387700|sp|O53597|RSMG_MYCTU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|2808704|emb|CAA16232.1| PROBABLE GLUCOSE-INHIBITED DIVISION PROTEIN B GID [Mycobacterium
tuberculosis H37Rv]
Length = 224
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E ++ LR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLRRTESLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|317509422|ref|ZP_07967040.1| glucose inhibited division protein [Segniliparus rugosus ATCC
BAA-974]
gi|316252251|gb|EFV11703.1| glucose inhibited division protein [Segniliparus rugosus ATCC
BAA-974]
Length = 225
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L+ E W RH+ +S V +L P + DLGSG G PGI +
Sbjct: 23 AYAEWLADVGVAAGLIGPREAERLWERHILNSAAVVELIPEGAQAADLGSGAGLPGIPIA 82
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ--EAPQMITTCDVISAR 148
I + L+E ++ ++ ++ V R + EA +++ V+ +R
Sbjct: 83 IARPDVRM---TLVEPLARRVDPVQKFLEDVGLDVGVLRARAESSEARELLAPVPVVVSR 139
Query: 149 ALADLDTLLEYS 160
A+A LDTL +S
Sbjct: 140 AVAALDTLARWS 151
>gi|160901811|ref|YP_001567392.1| methyltransferase GidB [Petrotoga mobilis SJ95]
gi|189040704|sp|A9BF05|RSMG_PETMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160359455|gb|ABX31069.1| methyltransferase GidB [Petrotoga mobilis SJ95]
Length = 225
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVFQLHPYPSIWIDL 78
S E EK+ + + + + +NL + +T +D + + D + +D+
Sbjct: 4 SDEKAEKINKYIEMLI--NYPVNLTAYTTKKDAYENLILDSLIPIEAEDTFLNSKNIVDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-AP 136
G+GGG PG++ +I E L++S +KK L+ +++ +F R ++ A
Sbjct: 62 GTGGGIPGLVWAIYFPEKEFY---LVDSVSKKIEALKIFIKELKITNVYLFCERAEDFAK 118
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLY 165
D + +ALA D LEY P +
Sbjct: 119 THRDYFDFATCKALARSDIALEYLSPLVK 147
>gi|262040355|ref|ZP_06013601.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330005172|ref|ZP_08305134.1| 16S rRNA methyltransferase GidB [Klebsiella sp. MS 92-3]
gi|259042296|gb|EEW43321.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536378|gb|EGF62737.1| 16S rRNA methyltransferase GidB [Klebsiella sp. MS 92-3]
Length = 159
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+RH+ DS+ + + S +ID+G+G G PGI +I L++S K+ F
Sbjct: 1 MLVRHILDSI-IVAPYLQGSRFIDVGTGPGLPGIPLAIVCPE---SHFTLLDSLGKRVRF 56
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
LR V + EA D + +RA A L+ ++ +
Sbjct: 57 LRQVQHELKLDNVTPVQSRVEAFPAEPPFDGVISRAFASLNDMVSWCHHL 106
>gi|159473280|ref|XP_001694767.1| methyltransferase [Chlamydomonas reinhardtii]
gi|158276579|gb|EDP02351.1| methyltransferase [Chlamydomonas reinhardtii]
Length = 258
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 55/186 (29%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI--------------- 76
+ L+ ++ +NL + D W RHV DSL + + + +
Sbjct: 4 YLDHMLEVNQTMNLTAVRDKGDAWQRHVVDSLALLPVIERHAAAMGLLRPAGPAVAGAEA 63
Query: 77 ---------------------------------DLGSGGGFPGIITSIQLSSIEGGLVNL 103
D+G+G G PG+I + + V L
Sbjct: 64 GAAEARGSSGRSAGSSSGSSSRSSGDGVELRLIDVGTGAGLPGMIIAAARPQWK---VTL 120
Query: 104 IESKNKKASFLRYVVQKTAA-RGKVFACRIQE---APQMITTCDVISARALADLDTLLEY 159
+++ K+ FL+ + V CR +E P++ DV ARA+A+ L E
Sbjct: 121 LDTLRKRCDFLKEAAARAGLRNVDVVWCRAEEGGRRPELRQAYDVAVARAVAETRVLAEL 180
Query: 160 SFPWLY 165
P++
Sbjct: 181 CMPFVR 186
>gi|163842271|ref|YP_001626676.1| 16S rRNA methyltransferase GidB [Renibacterium salmoninarum ATCC
33209]
gi|189040714|sp|A9WVP1|RSMG_RENSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|162955747|gb|ABY25262.1| methyltransferase [Renibacterium salmoninarum ATCC 33209]
Length = 215
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ V W RHV + V +L + D+GSG G PG+
Sbjct: 24 QRYVEHLATSGIERGLIGPREVPRLWDRHVLNCAVVVELIEIDATVADVGSGAGLPGLCL 83
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
++ + + LIE ++ ++L VV +V F R ++A + C V++A
Sbjct: 84 ALARPDL---SITLIEPLERRVTWLSEVVADLGLSDQVTLFRMRAEQAVDEV-NCSVVTA 139
Query: 148 RALADLDTLLEYSFPWLY 165
RA++ LD L + P L+
Sbjct: 140 RAVSALDKLAGLTIPLLH 157
>gi|108759077|ref|YP_635596.1| methyltransferase GidB [Myxococcus xanthus DK 1622]
gi|123073866|sp|Q1CVH7|RSMG_MYXXD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|108462957|gb|ABF88142.1| methyltransferase GidB [Myxococcus xanthus DK 1622]
Length = 217
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L+ LKW+ K+NL + + E+ +H DSL V + +DLG+G GFPG+
Sbjct: 28 RLQRLMSELLKWNAKVNLTAITAPEEVLEKHFLDSLAVLPEVTGAATLLDLGAGAGFPGL 87
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMIT--TCDV 144
+ L ++ V L+++ KK +F++ + + R + P+ +V
Sbjct: 88 PLKLALPALG---VTLVDTVGKKVAFIKAAAASLGLQGVRGLHARAEGQPETEGIPRAEV 144
Query: 145 ISARALADLDTLLEYS 160
+ ARA DL L +
Sbjct: 145 LIARAFMDLPDWLALA 160
>gi|309800606|ref|ZP_07694750.1| methyltransferase GidB [Streptococcus infantis SK1302]
gi|308115752|gb|EFO53284.1| methyltransferase GidB [Streptococcus infantis SK1302]
Length = 172
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ P +D+G+G GFP + I ++ V +I+S NK+ +FL + Q+
Sbjct: 1 MIENQPIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLNLLAQELGLENV 57
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+++ARA+A L L E + P+L
Sbjct: 58 HFYHGRAEDFGQDKNFRAQFDIVTARAVARLQVLSELTIPFLK 100
>gi|162454334|ref|YP_001616701.1| putative glucose-inhibited division protein [Sorangium cellulosum
'So ce 56']
gi|189040719|sp|A9GCQ1|RSMG_SORC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161164916|emb|CAN96221.1| putative glucose-inhibited division protein [Sorangium cellulosum
'So ce 56']
Length = 239
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 3/144 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+ KL + L ++ +NL S + + W +HV DSL + L S L G
Sbjct: 39 IAKLGDYLARLLAMNELMNLTSITDPVEVWEKHVLDSLTLLPLLEELSAGARLADIGSGG 98
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE---APQMITTC 142
G+ + V L+E+ KKASFL V E +
Sbjct: 99 GLPGLPLAIARPDLKVTLVEATQKKASFLVAVAAGLGLTNVSVRAERAEQLGKGDLCGAF 158
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D ++ARA+ L L+ + P++
Sbjct: 159 DAVTARAVGRLVMLIPLTVPFVRP 182
>gi|117929363|ref|YP_873914.1| methyltransferase GidB [Acidothermus cellulolyticus 11B]
gi|166224340|sp|A0LWW8|RSMG_ACIC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117649826|gb|ABK53928.1| 16S rRNA m(7)G-527 methyltransferase [Acidothermus cellulolyticus
11B]
Length = 222
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + L+ + V+ W RH+ + + L P ID+GSG G PGI+ +
Sbjct: 25 RYVEWLSTAGLERGLIGPAEVDRLWERHIANCAALAPLIPVDQRVIDVGSGAGLPGIVLA 84
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ +E V LIE+ +++ +FLR VV R E + T V++ARA+
Sbjct: 85 LARPDLE---VLLIEAMSRRTAFLREVVADLGLRDVTVENSRAE--NVACTAPVVTARAV 139
Query: 151 ADLDTLLEYSFPWL 164
A L L++ L
Sbjct: 140 APLPRLVKNVAHLL 153
>gi|320537497|ref|ZP_08037441.1| 16S rRNA methyltransferase GidB [Treponema phagedenis F0421]
gi|320145638|gb|EFW37310.1| 16S rRNA methyltransferase GidB [Treponema phagedenis F0421]
Length = 228
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 14/142 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP----------SIW 75
+E L + ++ NLV + ++ I H+ DSL +++ +
Sbjct: 27 VELLTKYIRELQLFNSAFNLVKVDSEKELVINHILDSLAPWKIFADRFDAAKNTDAVYRF 86
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D GSG GFPGI + S + LIE K+A+FL V V C I+
Sbjct: 87 ADAGSGSGFPGIPLACLFLSKNPAVQFTLIERMQKRAAFLENVCAVLNLTNVSVLQCPIE 146
Query: 134 EAPQMITTCDVISARALADLDT 155
++P+ D+++ RA LD
Sbjct: 147 QSPEHE--YDIVAFRAFRPLDK 166
>gi|254548923|ref|ZP_05139370.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 224
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLRNCAVIGELLERGDRVVDIGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E ++ FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|315420681|gb|ADU15873.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+GSG G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E ++ FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLRRTEFLREMVTDRGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|239906964|ref|YP_002953705.1| methyltransferase GidB [Desulfovibrio magneticus RS-1]
gi|239796830|dbj|BAH75819.1| methyltransferase GidB [Desulfovibrio magneticus RS-1]
Length = 219
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 54/158 (34%), Gaps = 20/158 (12%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------- 76
E EKL + L +W ++NLV S + + DS V P
Sbjct: 15 EQAEKLAGYLTLLTRWRGRVNLVGPSDWREILETLIADSWHVADFLSGPGAAFLPPAGES 74
Query: 77 ----DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGK 126
D G+G G PG+ + G +L+E++ K+A FL + A G+
Sbjct: 75 VVSLDFGAGAGLPGVPL---RAFWNRGDYHLLEARQKRAVFLGECAARLGFAGLFAAEGR 131
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V A + +RA A L +
Sbjct: 132 VEATVPPIVAAHPGAFILCLSRAFAPWPQFLAICRELV 169
>gi|315420685|gb|ADU15875.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + LV V W RH+ + + +L +D+G G G PG+ +
Sbjct: 21 RYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGRGAGLPGVPLA 80
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
I ++ V L+E ++ FLR +V ++ R +E + D +R
Sbjct: 81 IARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSR 137
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++S P +
Sbjct: 138 AVAALDKLTKWSMPLIRP 155
>gi|262341120|ref|YP_003283975.1| glucose-inhibited division protein B [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272457|gb|ACY40365.1| glucose-inhibited division protein B [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 206
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 10/152 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQ 67
L Y + N + L KL L+ W+ +NL+S T DF +H+ +
Sbjct: 3 LYKKYFPDLLN---QQLYKLSSLKNLYAYWNTHVNLISRKTFYDFDQQHILFCLGIAKVF 59
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
S +DLG+GGGFPGI SI E L++S KK + ++ +
Sbjct: 60 SFFPGSCVMDLGTGGGFPGIPLSIVFPHTE---FILVDSIRKKIKIIEKIIYDLHLKNA- 115
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEY 159
A ++ D + RA+ +D + +
Sbjct: 116 -HPICIRAEKLENKFDFVVTRAVTKIDIIQNW 146
>gi|328946990|ref|YP_004364327.1| ribosomal RNA small subunit methyltransferase G [Treponema
succinifaciens DSM 2489]
gi|328447314|gb|AEB13030.1| Ribosomal RNA small subunit methyltransferase G [Treponema
succinifaciens DSM 2489]
Length = 220
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 17/174 (9%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N L S+ + ++E + L+++K NL+ + + ++ + H+ DSL
Sbjct: 1 MNEKLNEGLKKLGLEFSQNQISRIETYISCVLEFNKTYNLMKADSTDELTVNHILDSLAA 60
Query: 66 FQLHPYPSIWI------------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
I D+GSGGG PGI ++ L+E K+ F
Sbjct: 61 APSIASFIQKIQEKKNIASLQIADIGSGGGCPGIPLAVAFPEQNFM---LVERMEKRCGF 117
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLD-TLLEYSFPWLYQ 166
L V K C + + + D+ RA D + L +
Sbjct: 118 LESAVCKMNLSNVKVNCIQADLIKP-ESFDIEVFRAFHPFDSKNTKLLLRMLKK 170
>gi|258512901|ref|YP_003186335.1| methyltransferase GidB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479627|gb|ACV59946.1| methyltransferase GidB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 239
Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS------I 74
V+ ET L + L +W++++NL + V + WI+H DS + Q+ +
Sbjct: 15 VTDETERHLRRYGELLGEWNERLNLTAIVEVREMWIKHFLDSAAIAQVPAWREIAERGGR 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
ID+GSG G PGI +I + L ++ K+ F+ +V+ R++
Sbjct: 75 VIDIGSGAGIPGIPLAI---AWRNVSFVLCDASRKRVQFVEHVIGDLGLTNVSAVHARME 131
Query: 134 EAPQM--ITTCD------VISARALADLDTLLEYSFPWLYQ 166
E + + D V + + LLEY+ P L
Sbjct: 132 ELGRTDARGSFDAAVARAVARS------NVLLEYAAPMLRP 166
>gi|85861012|ref|YP_463214.1| methyltransferase [Syntrophus aciditrophicus SB]
gi|123517892|sp|Q2LY85|RSMG_SYNAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85724103|gb|ABC79046.1| methyltransferase [Syntrophus aciditrophicus SB]
Length = 241
Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSST-VEDFWIRHVEDSLRVFQLHPYPSIW-IDL 78
+S L + +Y W+ +INL++S+ V D I+H DSL + P+P ID+
Sbjct: 36 LSDAQLNRFLMYYRELKFWNSRINLIASAESVTDIVIKHFLDSLTLIPCIPFPDGRLIDI 95
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--- 134
G+GGGFPGI I L+S++ V L+E+ KK SFL+ + + K+ R+++
Sbjct: 96 GTGGGFPGIPLKIALNSLK---VTLLEASRKKVSFLKSLRRVLNLQDMKILNERVEDLIT 152
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
D++ +RA L L + +
Sbjct: 153 QAPCPNRFDMVVSRAALKLPEYLRFGKELV 182
>gi|152993652|ref|YP_001359373.1| 16S rRNA methyltransferase GidB [Sulfurovum sp. NBC37-1]
gi|189040726|sp|A6QC07|RSMG_SULNB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151425513|dbj|BAF73016.1| glucose inhibited division protein B [Sulfurovum sp. NBC37-1]
Length = 193
Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ + KLE F L +W++ NL + +V + + DSL
Sbjct: 2 QYLNAEGIVLDDGIIGKLEGFAVLLHEWNQVHNLTGARSVVAIYDN-IVDSLYPLTFIRI 60
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G+G GFPG++ +I L E V L E K+ SFL+Y + +
Sbjct: 61 PKTLLDVGTGAGFPGLVLAIALPETE---VVLAEPLKKRVSFLKYAAIDLGLKNVTVEAK 117
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYS 160
E + D+IS+RA+ + LL+ +
Sbjct: 118 RVENV-VYEAFDMISSRAVTNTKLLLDLT 145
>gi|78779952|ref|YP_398064.1| methyltransferase GidB [Prochlorococcus marinus str. MIT 9312]
gi|123553754|sp|Q318R7|RSMG_PROM9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78713451|gb|ABB50628.1| 16S rRNA m(7)G-527 methyltransferase [Prochlorococcus marinus str.
MIT 9312]
Length = 237
Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 10 LRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++ + + +++E + + + + K NL +D+WI V DS+ F+
Sbjct: 1 MKKQNIPKEISEFITKEEIVMFQELQIKIAELNNKTNLTRLIKGDDYWISQVFDSIWPFK 60
Query: 68 LHPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P + ++D+GSG GFPG+ +I + E L++ + K L +
Sbjct: 61 TFPNINFDNKKFLDIGSGCGFPGLAYAITHPNSEIYLIDSSKKKTDALKLLIKEIN-FKN 119
Query: 124 RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ RI+ M + ++ + RA+++ T+ EY P L ++
Sbjct: 120 NIHIINDRIENLAHQSSMRNSFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|296273205|ref|YP_003655836.1| methyltransferase GidB [Arcobacter nitrofigilis DSM 7299]
gi|296097379|gb|ADG93329.1| methyltransferase GidB [Arcobacter nitrofigilis DSM 7299]
Length = 194
Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L N+ + L K E F W K NL + ++ +++ DS+ V +
Sbjct: 6 LEELNLGEDFLPKCEEFKKTLQHWGKVHNLSA-ELEDEKIEKNIYDSIYVLKFIKDYKTV 64
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+G+G G+PG+I ++ +I+ L+ + +F++ ++ ++ R++
Sbjct: 65 ADIGTGAGYPGLILAMARPNIKFYLIEPRAKRVAFLNFIKNSLK--LDNIEILCNRVEYV 122
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
+ D+I++RA+ + LL+ +
Sbjct: 123 KDI--KVDLITSRAVTNTSLLLDLT 145
>gi|51473286|ref|YP_067043.1| glucose-inhibited division protein B [Rickettsia typhi str.
Wilmington]
gi|81610838|sp|Q68XT1|RSMG_RICTY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51459598|gb|AAU03561.1| glucose inhibited division protein B [Rickettsia typhi str.
Wilmington]
Length = 191
Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
V E ++KL+ L KW+K INL+S +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VPSEIIQKLDILQNLIKKWNKSINLISDNTIPNFWQRHILDSLQLMQYISNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFPGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 63 SGAGFPGIVLSIA----GVAKVSLIEADLRKCIFLEKASKISNNSIQIINQRIEKIE--- 115
Query: 140 TTCDVISARALADLDTLLEYS 160
C++++ RA ++L+T+ +
Sbjct: 116 IDCNILTCRAFSNLNTIFNCT 136
>gi|327395841|dbj|BAK13263.1| methyltransferase GidB [Pantoea ananatis AJ13355]
Length = 160
Score = 67.4 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+RH+ DS+ V H S +ID+G+G G PGI +I + L++S K+ F
Sbjct: 1 MLVRHILDSI-VVAPHLQGSRFIDVGTGPGLPGIPLAIVMPE---AHFTLLDSLGKRVRF 56
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
LR V + EA D + +RA A L+ ++ +
Sbjct: 57 LRQVQHELGLTNIEPVQSRVEAFPSEPPFDGVISRAFASLEDMVSWCHHL 106
>gi|21618112|gb|AAM67162.1| glucose-inhibited division protein B-like protein [Arabidopsis
thaliana]
Length = 196
Score = 67.4 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 18/126 (14%)
Query: 55 WIRHVEDSLRVFQLHPYPSIW-----------IDLGSGGGFPGIITSIQLSSIEGGLVNL 103
RH+EDSL + ID+GSG G PG++ +I V L
Sbjct: 1 MERHIEDSLAILPPIKTCYNLHSSDLFDHINLIDVGSGAGLPGLVLAIACPDWR---VTL 57
Query: 104 IESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEY 159
+ES NK+ FL +VV T + R + DV ARA+A++ L EY
Sbjct: 58 LESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIARAVAEMRVLAEY 117
Query: 160 SFPWLY 165
P +
Sbjct: 118 CLPLVR 123
>gi|261415842|ref|YP_003249525.1| glucose inhibited division protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372298|gb|ACX75043.1| glucose inhibited division protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 217
Score = 67.4 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 13 NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-- 68
N L+ + V S ETL+KL F L + + NL+S+ E F RH+ DSL F
Sbjct: 14 NQFLSGHGVQLSEETLDKLYQFADLVVDTKEYGNLISAKDSEKFLSRHIADSLVPFVFLG 73
Query: 69 -----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
W D+G+G G P +I + +++ +E ++ + +F++ V +K
Sbjct: 74 KTLSTQDDTVRWADMGAGAGCPVFPLAIAMPNVQFY---AVEPRHMRVNFMQMVKEKLHL 130
Query: 124 RGKVFACRIQEAPQMITTCDVISARALA 151
+ E + T D IS RAL+
Sbjct: 131 DNLTVVGKRFETSGL-TDLDFISCRALS 157
>gi|305431986|ref|ZP_07401153.1| 16S rRNA methyltransferase GidB [Campylobacter coli JV20]
gi|304445070|gb|EFM37716.1| 16S rRNA methyltransferase GidB [Campylobacter coli JV20]
Length = 199
Score = 67.0 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
N +L+ +N + KL+ + + K+++ NL +++ + +E + +
Sbjct: 7 NLILSDFN-EEDFRAKLKIYKEILNKFNRIHNLTQLKNIDENILDSIE--ILKYFDFSKA 63
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+GSG GFP I + L S +L E KKA+FLR + +
Sbjct: 64 KNIVDIGSGAGFPAIFLAFILPSN----FHLFEPNPKKAAFLRSIKIECNLTNLTVYKEK 119
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + D+I++RAL D+ L++ QK
Sbjct: 120 VENYKSSFKADIITSRALMDVKPLIKLCLNISDQK 154
>gi|269216518|ref|ZP_06160372.1| 16S rRNA methyltransferase GidB [Slackia exigua ATCC 700122]
gi|269130047|gb|EEZ61129.1| 16S rRNA methyltransferase GidB [Slackia exigua ATCC 700122]
Length = 249
Score = 67.0 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSG 81
E + +E + +K ++K+NL ++ I H+ED + P + DLG+G
Sbjct: 34 EKEKMVEDYLASVIKMNEKLNLTRIVHEQEARILHLEDSLTALPLVEDALPGRYADLGTG 93
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQE-APQM 138
GGFPGI +I L++S +KK + ++ +V A + +A RI++ A +
Sbjct: 94 GGFPGIPLAIA----SERPTLLVDSVSKKIAAVKAMVSDLAWDSDIAYYAGRIEDLAREE 149
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
VI+ARA+ L +L+E + P L
Sbjct: 150 RNGFAVITARAVTKLVSLIELASPLL 175
>gi|262200037|ref|YP_003271246.1| methyltransferase GidB [Haliangium ochraceum DSM 14365]
gi|262083384|gb|ACY19353.1| methyltransferase GidB [Haliangium ochraceum DSM 14365]
Length = 211
Score = 67.0 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 54/147 (36%), Gaps = 2/147 (1%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWIDLG 79
+S L + L KW++KINL S + HV D L + + +D+G
Sbjct: 20 LSEPERGALCAYLELLAKWNRKINLTGSREP-EALAAHVVDCLALLRHIPADAVQAVDVG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PG + + + +E + I K+ S +R + R
Sbjct: 79 SGAGLPGAVVAALMPGLEVTALEPIHKKHAFLSAVRRELGLDNLRPLAQRAEEHRDRAGF 138
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
T D+ +RA L L+ +
Sbjct: 139 TAFDLAMSRATLALPAWLKLGQSMVRP 165
>gi|257455183|ref|ZP_05620418.1| 16S rRNA methyltransferase GidB [Enhydrobacter aerosaccus SK60]
gi|257447145|gb|EEV22153.1| 16S rRNA methyltransferase GidB [Enhydrobacter aerosaccus SK60]
Length = 215
Score = 66.6 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S E +L Y+ L W+K NL + + I+H+ DSL + +D
Sbjct: 27 KLPLSDEQQLQLLYYLQQLLFWNKAYNLTAIKDDQQALIKHIFDSLSI-VPFLPAGDLLD 85
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G P +I +I V ++S KK F++ V + + EA
Sbjct: 86 IGTGAGLPAVIVAICQP---QRAVTALDSNQKKIRFIKQVASELGLKNLTPVASRIEA-- 140
Query: 138 MITTCDVISARALADLDTLL 157
T VI++RA A L +
Sbjct: 141 HEGTYQVITSRAFASLVDFV 160
>gi|134103812|ref|YP_001109473.1| putative glucose inhibited division protein B [Saccharopolyspora
erythraea NRRL 2338]
gi|133916435|emb|CAM06548.1| putative glucose inhibited division protein B [Saccharopolyspora
erythraea NRRL 2338]
Length = 155
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITT 141
PGI SI +E + L+E ++ ++L+ V+ + +V R +E + +
Sbjct: 1 MPGIPLSIARPDLE---LTLLEPMARRVAWLQEVITELGLNAEVMRGRAEEGPVRERLAD 57
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV++ARA+A + L ++ P L +
Sbjct: 58 QDVVTARAVAPMARLAKWCLPLLRPE 83
>gi|307297770|ref|ZP_07577576.1| methyltransferase GidB [Thermotogales bacterium mesG1.Ag.4.2]
gi|306917030|gb|EFN47412.1| methyltransferase GidB [Thermotogales bacterium mesG1.Ag.4.2]
Length = 225
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 56/152 (36%), Gaps = 12/152 (7%)
Query: 21 VSRETLE-----KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
S E LE K E L L NL S E H+ED++ F+
Sbjct: 3 FSSEFLEPSFFAKYEKLIELMLS--SPHNLSSIKEFERAMTVHIEDTIIPFEGSSLSGRC 60
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
ID+GSGGG PG++ +I L+ES KK + + E
Sbjct: 61 IDIGSGGGIPGLVLAISFPKSNW---TLLESIAKKTREIERFARDLDLTNVAVKTARAEE 117
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLY 165
A + T D RA+ D LE + P +
Sbjct: 118 FAKEAGETFDSAFLRAVGRCDISLELAAPLVK 149
>gi|268679017|ref|YP_003303448.1| methyltransferase GidB [Sulfurospirillum deleyianum DSM 6946]
gi|268617048|gb|ACZ11413.1| methyltransferase GidB [Sulfurospirillum deleyianum DSM 6946]
Length = 189
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 7/151 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIW 75
+Y + + E F L L++++ N+ + T ++ ++++EDS+ F
Sbjct: 3 SYTLPAHFWDAAEQFATLLLQYNQTHNISGAKT-KEAVMKNIEDSIYPLQFLHVTTMKRG 61
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
ID+G+G GFPG++ ++ L L E KK++FL E
Sbjct: 62 IDVGTGAGFPGLLLALALP---HMHFTLFEPIAKKSAFLHLAKSALELYNVDVCTNRVEK 118
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D+IS+RA+ + L++ ++
Sbjct: 119 APSFE-ADLISSRAVTNTKVLIKLCHNFIAP 148
>gi|224012793|ref|XP_002295049.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969488|gb|EED87829.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 402
Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 63/161 (39%), Gaps = 24/161 (14%)
Query: 29 LEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDS-----------LRVFQLHPYPSIW 75
L L+W++++NLVS + RHV S + + +
Sbjct: 128 LLRLTEQVLQWNQRLNLVSRKDCTASVVYHRHVLPSVGLLPLIVPLLTQQQRDNAQQLKI 187
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+D+G+GGGFPG+ + L +++ L++S KK + + ++ R++E
Sbjct: 188 VDVGTGGGFPGLPLATLLPNVQ---FTLVDSIQKKLVAVSEMASDLDVNNVRIHHGRVEE 244
Query: 135 AP-------QMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ DV+ R++ L + L + K
Sbjct: 245 MYAGQEGKREHKGRYDVVLGRSVTALPRFCAWVADLLKKGK 285
>gi|284047379|ref|YP_003397719.1| methyltransferase GidB [Conexibacter woesei DSM 14684]
gi|283951600|gb|ADB54344.1| methyltransferase GidB [Conexibacter woesei DSM 14684]
Length = 245
Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 4/127 (3%)
Query: 42 KINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+ + D H+ D + DLG+G GFPG+ ++ L
Sbjct: 36 EHAPTTVRDPRDAVGVHLADSLVALALSDVSDARMIADLGAGAGFPGLPLAVALPEANIA 95
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
LV I K + T V A R + + DV++ARALA L + EY
Sbjct: 96 LVESIARKCGFIAAAAASAGLT--NVDVVAERAEAWADGMGRIDVVTARALAPLGVIAEY 153
Query: 160 SFPWLYQ 166
+ P L +
Sbjct: 154 AAPLLRE 160
>gi|86743217|ref|YP_483617.1| 16S rRNA methyltransferase GidB [Frankia sp. CcI3]
gi|123764289|sp|Q2J4A4|RSMG_FRASC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86570079|gb|ABD13888.1| 16S rRNA m(7)G-527 methyltransferase [Frankia sp. CcI3]
Length = 265
Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 3/138 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + L+ + W RHV + + + P + +D+GSG G PGI +
Sbjct: 27 RYVELLATDGVERGLIGPRETDRLWDRHVLNCAVLADVVPVQADVVDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISAR 148
+ + L+ +E + + + + + V R + + AR
Sbjct: 87 LARPDLRVVLLEPMERRCRFLHEVVATIG-LEDQISVVRGRAPDAGIGPDGRRFGIAVAR 145
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L+ L FP L
Sbjct: 146 AVAPLERLGAILFPMLRP 163
>gi|57168863|ref|ZP_00367993.1| methyltransferase GidB [Campylobacter coli RM2228]
gi|57019699|gb|EAL56385.1| methyltransferase GidB [Campylobacter coli RM2228]
Length = 194
Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
N +L+ +N + KL+ + + K+++ NL +++ + +E + +
Sbjct: 7 NLILSDFN-EEDFRAKLKIYKEILNKFNRIHNLTQLKNIDENILDSIE--ILKYFDFSKA 63
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+GSG GFP I + L S +L E KKA+FLR + +
Sbjct: 64 KNIVDIGSGAGFPAIFLAFILPSN----FHLFEPNPKKAAFLRSIKIECNLTNLTVYKEK 119
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + D+I++RAL D+ L++ QK
Sbjct: 120 VENYKSSFKADIITSRALMDVKPLIKLCLNISDQK 154
>gi|171741739|ref|ZP_02917546.1| hypothetical protein BIFDEN_00830 [Bifidobacterium dentium ATCC
27678]
gi|171277353|gb|EDT45014.1| hypothetical protein BIFDEN_00830 [Bifidobacterium dentium ATCC
27678]
Length = 249
Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 55/176 (31%), Gaps = 40/176 (22%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL------HPYPSIWIDLG 79
L KL F+ + + L+ V W RH+ +S + D+G
Sbjct: 22 LVKLRIFHDKLAQEGEPRGLIGPRDVGIIWERHILNSAAIVPFVREATVRRQFKTVADIG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
SGGGFPGI+ + L L+E ++ +L V V R
Sbjct: 82 SGGGFPGIVAAACL---SDHRFTLVEPMERRVEWLNECVNDMGLDNVTVVRSRANAMIDA 138
Query: 139 IT------------------------------TCDVISARALADLDTLLEYSFPWL 164
I V++ RA+A + L ++ P L
Sbjct: 139 IRGSKTSRKNRGAISHTTPVLDLDGNPIATSHPFAVVTCRAVAPMTKLSGWTLPLL 194
>gi|283457084|ref|YP_003361648.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Bifidobacterium dentium Bd1]
gi|283103718|gb|ADB10824.1| GidB Methyltransferase gidB (Glucose inhibited division protein B)
[Bifidobacterium dentium Bd1]
Length = 227
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 54/174 (31%), Gaps = 40/174 (22%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL------HPYPSIWIDLGSG 81
KL F+ + + L+ V W RH+ +S + D+GSG
Sbjct: 2 KLRIFHDKLAQEGEPRGLIGPRDVGIIWERHILNSAAIVPFVREATVRRQFKTVADIGSG 61
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMIT 140
GGFPGI+ + L L+E ++ +L V V R I
Sbjct: 62 GGFPGIVAAACL---SDHRFTLVEPMERRVEWLNECVNDMGLDNVTVVRSRANAMIDAIR 118
Query: 141 ------------------------------TCDVISARALADLDTLLEYSFPWL 164
V++ RA+A + L ++ P L
Sbjct: 119 GSKTSRKNRGAISHTTPVLDLDGNPIATSHPFAVVTCRAVAPMTKLSGWTLPLL 172
>gi|157825213|ref|YP_001492933.1| 16S rRNA methyltransferase GidB [Rickettsia akari str. Hartford]
gi|166224607|sp|A8GM00|RSMG_RICAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157799171|gb|ABV74425.1| glucose-inhibited division protein B [Rickettsia akari str.
Hartford]
Length = 191
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 8/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
VSRE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VSREIIEKLEIFQKLVKKWNKSINLVSGNTIHNFWQRHILDSLQLMQYIDNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFPGI+ SI V+LIE+ +K FL + Q ++
Sbjct: 63 SGAGFPGIVLSIA----GVAKVSLIEADLRKCIFLEKASK---ISNNNIQIINQRIEKVA 115
Query: 140 TTCDVISARALADLDTLLE 158
C +++ RA + L+T+
Sbjct: 116 IDCSILTCRAFSKLNTIFN 134
>gi|223038816|ref|ZP_03609108.1| 16S rRNA methyltransferase GidB [Campylobacter rectus RM3267]
gi|222879789|gb|EEF14878.1| 16S rRNA methyltransferase GidB [Campylobacter rectus RM3267]
Length = 185
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 5/147 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ R+ + F + K+++ +L S + + + Q+ + ID
Sbjct: 2 KIDLPRDFDAQTAKFSEILAKFNRVHSLTSYKNLNEQIADSIAPLEIFPQIWGAKTA-ID 60
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG GFP I ++ L E L K+ S+++ + T V AC+I++
Sbjct: 61 VGSGAGFPAIFLAMILRECEWHLFEPSPKKSSFLSYVKAELNLT--NVCVKACKIEDGEP 118
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+I++RAL LL +L
Sbjct: 119 FTAQ--LITSRALMKTKDLLGICNGFL 143
>gi|218960615|ref|YP_001740390.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division (gidB-like) [Candidatus
Cloacamonas acidaminovorans]
gi|167729272|emb|CAO80183.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division (gidB-like) [Candidatus
Cloacamonas acidaminovorans]
Length = 219
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 15/145 (10%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTV-EDFWIRHVED-SLRVFQLHPYPSIWIDLGSGGG 83
+ + E++ L ++K+NLVS + E +W++H D + + L +D GSGGG
Sbjct: 30 MARFEHYLHLLYNANRKVNLVSRNIPLERYWVQHFLDSIVALECLDFTDKTVLDFGSGGG 89
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM---IT 140
PGI + + + L++S KKA LR V + E
Sbjct: 90 LPGIPLKLAVPD---FNLTLLDSVQKKARVLREFVDALSLSATNVEASRLEDYAYVAKRP 146
Query: 141 TCDVISARALA-------DLDTLLE 158
+ D I RA+A L LL+
Sbjct: 147 SYDFIVCRAVALEERYFSPLRRLLK 171
>gi|170783397|ref|YP_001711731.1| 16S rRNA methyltransferase GidB [Clavibacter michiganensis subsp.
sepedonicus]
gi|189039493|sp|B0RDP8|RSMG_CLAMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169157967|emb|CAQ03177.1| cell division methyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 211
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 4/135 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
F +++ L+ W RH+ +S+ V L P + D+G+G G PG++ +
Sbjct: 27 EFASQLGSRGEELGLIGPLEPPRLWSRHIINSVLVAPL-LNPGVVGDIGTGAGLPGLVLA 85
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
I ++ LIE ++ ++L V E + D ++ARA+
Sbjct: 86 IARPDVD---FVLIEPMERRVAWLEEQVAHLGLDNVQVRRARAEDVANEISLDQVTARAV 142
Query: 151 ADLDTLLEYSFPWLY 165
+ L+ + P +
Sbjct: 143 SAFSKLIPLTVPLVK 157
>gi|307297008|ref|ZP_07576824.1| methyltransferase GidB [Sphingobium chlorophenolicum L-1]
gi|306877534|gb|EFN08762.1| methyltransferase GidB [Sphingobium chlorophenolicum L-1]
Length = 211
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPY 71
+L ++V RET +LE + + L + NL++ ST W RH+ DS ++ +
Sbjct: 9 WLEQQFDVPRETWNRLERYVAILLAEMDRQNLIAESTRPHVWARHIVDSAQLIPLAANGG 68
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFAC 130
WIDLGSG G PGI+ +I + V ++ES+ K+ FL V+ + VF
Sbjct: 69 EGQWIDLGSGAGLPGIVVAI----LTDRPVQMVESRRKRIDFLNAVIAELHLSGASVFGG 124
Query: 131 RIQEAPQ------MITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ P A L LLE + +K
Sbjct: 125 RVEIVPPARAAIISARAY--------APLPKLLESAVHLSDEK 159
>gi|111226211|ref|YP_717005.1| 16S rRNA methyltransferase GidB [Frankia alni ACN14a]
gi|122953628|sp|Q0RAP0|RSMG_FRAAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|111153743|emb|CAJ65501.1| Methyltransferase gidB (Glucose inhibited division protein B)
(partial match) [Frankia alni ACN14a]
Length = 262
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 7/141 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E F L + L+ + W RHV + + ++ P + +D+GSG G PGI
Sbjct: 23 ERFTELLATAGVERGLIGPRETDRLWERHVINCGVLAEVVPEGADAVDVGSGAGLPGIPL 82
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQE--APQMITTCDVI 145
++ + V L+E ++ FL+ VV V R + V
Sbjct: 83 ALARPDVR---VVLLEPMERRCRFLQEVVAAVGLEEQVSVLRGRAPDAGIGPEGRRFGVA 139
Query: 146 SARALADLDTLLEYSFPWLYQ 166
ARA+A L+ L P L
Sbjct: 140 VARAVAPLERLGAILLPMLQP 160
>gi|302035746|ref|YP_003796068.1| methyltransferase GidB [Candidatus Nitrospira defluvii]
gi|300603810|emb|CBK40142.1| Methyltransferase GidB [Candidatus Nitrospira defluvii]
Length = 218
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 9/129 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
+ KW+K INL + + ++H DS+ + +D+G+G GFP
Sbjct: 31 FFRYLVELKKWNKAINLTAIDDDREVLVKHFIDSIAGLKVIDINDETELLDVGAGAGFPA 90
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT----TC 142
+ + V L++ KK +FLRYVV G A E
Sbjct: 91 LPLKFVRPEL---SVELLDPNEKKGAFLRYVVGTLGLVGATVATAKLEDYASRGNVQARF 147
Query: 143 DVISARALA 151
D I RA
Sbjct: 148 DYIVVRAFK 156
>gi|193806485|sp|A2BYK1|RSMG_PROM5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 239
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 10 LRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + ++ E + + + + K NL +D+WI V DSL F+
Sbjct: 1 MTKESIPKELLKLITGEEIMMFQELRIRIQELNYKTNLTRLIEGDDYWISQVYDSLWTFK 60
Query: 68 LH----PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +ID+GSG GFPG +I + E L++S KK L+ ++++
Sbjct: 61 ENSKKIFDNKKFIDIGSGCGFPGFAYAITHPNSEIY---LVDSSKKKTDSLKEIIKRMNF 117
Query: 124 RGK--VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V RI+ + + ++ +ARA+++ T+ EY P L Q
Sbjct: 118 KNNIFVINDRIENVGRQSSFKKSFNIATARAVSNPSTVAEYILPMLEQ 165
>gi|157415254|ref|YP_001482510.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81116]
gi|172047135|sp|A8FM46|RSMG_CAMJ8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157386218|gb|ABV52533.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81116]
gi|315932124|gb|EFV11067.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 327]
Length = 188
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I + L Y++ + EK++ + L K+++ NL +++ ++ + F
Sbjct: 2 IFKDYDFLQNYDL-KNFEEKIKIYKELLSKFNRIHNLTHLKNIDENIFDSIK--ILDFYD 58
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 59 FSKAKNIADIGSGAGFPAVFLAFLL----QNNFHLFEPNPKKAAFLRTLKIECELSNLHI 114
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ Q I D+I++RAL D+ LLE
Sbjct: 115 YKEKVQEYQNIFKADIITSRALMDVKPLLEICKNL 149
>gi|257460988|ref|ZP_05626088.1| 16S rRNA methyltransferase GidB [Campylobacter gracilis RM3268]
gi|257441651|gb|EEV16794.1| 16S rRNA methyltransferase GidB [Campylobacter gracilis RM3268]
Length = 192
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E++ F K+++ +L + ++ + V + YP I D+GSG GFPG
Sbjct: 11 EQVAKFKACLQKFNRVHSLTNYDDLDAVV---CDSLSGVNFIPRYPRIACDIGSGAGFPG 67
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I ++ + E L + K ++ + V K+ A R+Q+ ++ D+IS
Sbjct: 68 IFLALAMPLCEWHLFEPNQKKAAFLTYAK--VSLALTNVKIHAERVQDGAKLR--ADLIS 123
Query: 147 ARALADLDTLLEYSFPW 163
+RAL +L+E +
Sbjct: 124 SRALMSAQSLIEICRGF 140
>gi|154148362|ref|YP_001407212.1| methyltransferase GidB [Campylobacter hominis ATCC BAA-381]
gi|193806439|sp|A7I3X1|RSMG_CAMHC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|153804371|gb|ABS51378.1| methyltransferase GidB [Campylobacter hominis ATCC BAA-381]
Length = 183
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E++E F K++K ++ + + + +E + P + ID+GSG GFP
Sbjct: 11 EQIEQFGKCLEKFNKIHSITNYNDLSAVIEDSLEGLK---FITEMPKVAIDIGSGAGFPA 67
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I ++ L + L E KKA+FL Y + + E D+I+
Sbjct: 68 IFLAMVLPYTKWH---LFEPNTKKAAFLTYAKVNLKLKNIIIHNTKIENETPFI-ADLIT 123
Query: 147 ARALADLDTLLEYSFPW 163
+RA+ + L++ S +
Sbjct: 124 SRAVMKVPDLIKISHGF 140
>gi|308234066|ref|ZP_07664803.1| methyltransferase GidB [Atopobium vaginae DSM 15829]
Length = 281
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED------SLRVFQLHPYPSIWIDLGSGG 82
L + +++K NL + + H D ++ ++ +DLG+G
Sbjct: 67 LYKHFCSMREYNKITNLTRITDTWSALVLHYLDSLLNILVMQNLNINLQTQTILDLGTGA 126
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--ACRIQEA-PQMI 139
GFPGI SI+L + L +S KK FL + + + G ++ R++E PQ
Sbjct: 127 GFPGIPLSIKLPKK----LVLCDSVGKKTKFLSHYIAENRIDGPIYIENKRVEELSPQYD 182
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
+I RA+A L LLEY+ P L
Sbjct: 183 HQFTLIVTRAVAQLSILLEYASPLL 207
>gi|212715143|ref|ZP_03323271.1| hypothetical protein BIFCAT_00029 [Bifidobacterium catenulatum DSM
16992]
gi|212661824|gb|EEB22399.1| hypothetical protein BIFCAT_00029 [Bifidobacterium catenulatum DSM
16992]
Length = 267
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 67/217 (30%), Gaps = 59/217 (27%)
Query: 1 MKYCD-SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
+ D ++ + + L + L K+ F+ ++ + L+ V W RH+
Sbjct: 2 VPMSDVTDELDDSPILEEVLG---DALGKMRVFHAKLVEEGEPRGLIGPRDVAIIWERHI 58
Query: 60 EDSLRVFQL------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+S + D+GSGGGFPGI+ + L + L+E ++ +
Sbjct: 59 LNSAAIVPFVRESTAKKQFKTVADIGSGGGFPGIVAAACLPDHQ---FTLVEPMERRIEW 115
Query: 114 LRYVVQKTAA-RGKVFACRIQEA------------------------------------- 135
L V+ V R E
Sbjct: 116 LNECVEDMELENVTVVRARANEMIEAIAGASGVQGGNRGNGNARNGKGGRNGRGAVARGP 175
Query: 136 --------PQMITTCDVISARALADLDTLLEYSFPWL 164
Q V++ RA+A + L ++ P L
Sbjct: 176 VLDLDGKPIQARHPFAVVTCRAVAPMTKLSGWTLPLL 212
>gi|328943463|ref|ZP_08240928.1| glucose inhibited division protein B [Atopobium vaginae DSM 15829]
gi|327491432|gb|EGF23206.1| glucose inhibited division protein B [Atopobium vaginae DSM 15829]
Length = 284
Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED------SLRVFQLHPYPSIWIDLGSGG 82
L + +++K NL + + H D ++ ++ +DLG+G
Sbjct: 70 LYKHFCSMREYNKITNLTRITDTWSALVLHYLDSLLNILVMQNLNINLQTQTILDLGTGA 129
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--ACRIQEA-PQMI 139
GFPGI SI+L + L +S KK FL + + + G ++ R++E PQ
Sbjct: 130 GFPGIPLSIKLPKK----LVLCDSVGKKTKFLSHYIAENRIDGPIYIENKRVEELSPQYD 185
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
+I RA+A L LLEY+ P L
Sbjct: 186 HQFTLIVTRAVAQLSILLEYASPLL 210
>gi|304372919|ref|YP_003856128.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma
hyorhinis HUB-1]
gi|304309110|gb|ADM21590.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma
hyorhinis HUB-1]
Length = 204
Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 21 VSRETL-EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYPSIW 75
V+ E + +LE F L + +K +NL + + W + +S + L
Sbjct: 12 VNNEQIFSQLEKFVSLIEQKNKVMNLTGFTQ-DQLWKEGIYESIITLKQSIDLKNKKIAL 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G+G GFP I I S I+ + ++E K+ FL+ V Q+ ++ A
Sbjct: 71 LDVGAGAGFPSIPFFIINSDIK---LVIVEKLKKRCDFLQLVKQELNLDFEIINDL---A 124
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
+ D I+ARA+ +LD L + +
Sbjct: 125 SNLQAKFDYITARAVGNLDFLFKITKKL 152
>gi|312200973|ref|YP_004021034.1| methyltransferase GidB [Frankia sp. EuI1c]
gi|311232309|gb|ADP85164.1| methyltransferase GidB [Frankia sp. EuI1c]
Length = 251
Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 3/143 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+ + L + L+ E W RH+ + V + + +D+GSG G P
Sbjct: 19 LDDAIRYAELLATAGVERGLIGPRETERLWDRHLLNCAVVAEAVGPDATVVDVGSGAGLP 78
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT--TCD 143
G+ ++ + + +E + + + T+ R V R +A D
Sbjct: 79 GVPLALARPDLRVVFLEPMERRCVFLREVVEALGATS-RMSVLRGRAPDAGMGRDGLRWD 137
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
V ARA+A L+ L P +
Sbjct: 138 VAVARAVAPLERLGGMLLPVVQP 160
>gi|302840158|ref|XP_002951635.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
gi|300263244|gb|EFJ47446.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
Length = 168
Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+G+G G PG++ ++ + V L++S K+ FLR + +V CR ++
Sbjct: 4 LDVGTGAGLPGMVLAVARPQWK---VTLLDSLRKRCEFLREAAARAGLDNVEVVWCRAED 60
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
A P++ D+ ARA+A+ L E P++
Sbjct: 61 AGRRPELRQAYDIAIARAVAEARVLAELCLPFVR 94
>gi|218291086|ref|ZP_03495109.1| methyltransferase GidB [Alicyclobacillus acidocaldarius LAA1]
gi|218238971|gb|EED06178.1| methyltransferase GidB [Alicyclobacillus acidocaldarius LAA1]
Length = 240
Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS------I 74
V+ E +L + L +W++++NL + + WI+H DS + Q+ +
Sbjct: 15 VTGEAERELRRYGELLAEWNERLNLTAIVEAREMWIKHFLDSAAIAQVPAWREIAERGGR 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
ID+GSG G PGI +I L ++ K+ F+ +V+ + R++
Sbjct: 75 VIDIGSGAGIPGIPLAI---LWRNVSFVLCDASRKRVQFVEHVIGDLGLANVRAVHARME 131
Query: 134 EAPQM---ITTCDVISARALADLDTLLEYSFPWLYQ 166
E + + D ARA+A + LLEY+ P L
Sbjct: 132 EFGRQPGARGSFDAAVARAVARSNVLLEYAAPMLRP 167
>gi|317968952|ref|ZP_07970342.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CB0205]
Length = 242
Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-----WI 76
S + L++ +W+ ++NL +DFWI + DSL + I
Sbjct: 17 SDDQLQRFLQLQEELRQWNSRVNLTRLVEGDDFWIAQIFDSLWPLVPQLQANPEAALRCI 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQ- 133
D+G+GGGFPG+ +I + + L++S +K + + Q R ++ RI+
Sbjct: 77 DVGTGGGFPGLAVAIAFPQAQ---LTLVDSVGRKTQAVEAMAQSLGLGERVELRCERIEL 133
Query: 134 --EAPQMITTCDV 144
+ D+
Sbjct: 134 TGRQKRCRGQFDL 146
>gi|327334545|gb|EGE76256.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL097PA1]
Length = 211
Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 18 RDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E LIE ++++FL + + R V R ++ +
Sbjct: 78 GLPGIPLAILRPDLEM---TLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDVDLHVD 134
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
+RA+A L TL+ ++ +
Sbjct: 135 VVV---SRAVAKLATLINWTADLI 155
>gi|213615948|ref|ZP_03371774.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 144
Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L L++S K+ FLR V +
Sbjct: 1 MQGQRFIDVGTGPGLPGIPLAIVLPD---AHFTLLDSLGKRVRFLRQVQHELKLENITPV 57
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L+ ++ +
Sbjct: 58 QSRVEAYPSEPPFDGVISRAFASLNDMVSWCHHL 91
>gi|225352373|ref|ZP_03743396.1| hypothetical protein BIFPSEUDO_03990 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156880|gb|EEG70249.1| hypothetical protein BIFPSEUDO_03990 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 267
Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 57/191 (29%), Gaps = 55/191 (28%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL------HPYPSIWIDLG 79
L KL F+ + + L+ V W RH+ +S + D+G
Sbjct: 25 LGKLRVFHAKLAEEGEPRGLIGPRDVGIIWERHILNSAAIVPFVKEATAKKQFKTVADIG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGGFPGI+ + L L+E ++ +L V V R E +
Sbjct: 85 SGGGFPGIVAAACLPD---HRFTLVEPMERRVEWLNECVADMELNNVTVVRARANEMIEA 141
Query: 139 IT---------------------------------------------TCDVISARALADL 153
I V++ RA+A +
Sbjct: 142 IAGATGAQGGNRGNGSARNGKGGKNGRGVAVRGPVLDLDGKPIQAKHPFAVVTCRAVAPM 201
Query: 154 DTLLEYSFPWL 164
L ++ P L
Sbjct: 202 TKLSGWTLPLL 212
>gi|307104809|gb|EFN53061.1| hypothetical protein CHLNCDRAFT_58678 [Chlorella variabilis]
Length = 1697
Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+GSG G PGII +I E V L++S K+ F V+ +V R +E
Sbjct: 283 IDVGSGAGLPGIILAIARPDWE---VTLLDSLQKRCRFAEAAVEAAGLANVRVHWGRAEE 339
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
A Q + DV ARA+A+L L E P +
Sbjct: 340 AGQDPALRQQHDVAIARAVAELRVLAELCLPLVRP 374
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
L + E ++++ F + L W++++NL + + + RHV DSL
Sbjct: 153 FLKYAGLPPEQQQQVDAFVDILLDWNQRMNLTAIKDRGECYERHVNDSLA 202
>gi|57237822|ref|YP_179070.1| methyltransferase GidB [Campylobacter jejuni RM1221]
gi|73621005|sp|Q5HUG5|RSMG_CAMJR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|57166626|gb|AAW35405.1| methyltransferase GidB [Campylobacter jejuni RM1221]
Length = 188
Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 7/155 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I + L Y++ + EK++ + L K+++ NL +++ ++ + F
Sbjct: 2 IFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSIK--ILDFYD 58
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+GSG GFP + + L G +L E KKA+FLR + +
Sbjct: 59 FSKAKNIADIGSGAGFPAVFLAFLL----QGNFHLFEPNPKKAAFLRTLKIECELSNLHI 114
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ Q I D+I++RAL D+ LLE
Sbjct: 115 YKEKVQEYQNIFKADIITSRALMDVKPLLEICKNL 149
>gi|315453598|ref|YP_004073868.1| glucose-inhibited division protein B GidB [Helicobacter felis ATCC
49179]
gi|315132650|emb|CBY83278.1| glucose-inhibited division protein B; GidB [Helicobacter felis ATCC
49179]
Length = 180
Score = 63.9 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ F L L+W++ L + + + DS+RV +D+GSG GFP I
Sbjct: 6 LDRFSALLLEWNRTHALSGAKHLTQV-QAQITDSVRVLDFIQPFKTCLDIGSGAGFPAIP 64
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISA 147
+I L+E KK +FL +V A + R+Q+ P M + ++I++
Sbjct: 65 LAIHCPK---AHFTLLEPNAKKIAFLHHVKMTLALDNITLKRVRLQDLPPM--SVELITS 119
Query: 148 RALADLDTLLEYSFPWL 164
RAL L+ S P+L
Sbjct: 120 RALMGAQELITLSTPFL 136
>gi|294010014|ref|YP_003543474.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Sphingobium japonicum UT26S]
gi|292673344|dbj|BAI94862.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Sphingobium japonicum UT26S]
Length = 213
Score = 63.9 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPY 71
+L ++V R T ++LE + + L + NL++ ST W RH+ DS ++ +
Sbjct: 9 WLQTRFDVPRGTWDRLERYVAVILDEMGRQNLIAESTRPHIWARHIVDSAQLIPLADNAG 68
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
WIDLGSG G PGI+ +I + V ++ES+ K+ FL V+ + VF
Sbjct: 69 DGKWIDLGSGAGLPGIVVAI----LTRRPVEMVESRRKRIDFLNDVIAELGLPNAAVFGG 124
Query: 131 RIQEAP------QMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ P A L LLE + +K
Sbjct: 125 RVESVPTAAAAVISARAY--------APLPKLLESAEHLADEK 159
>gi|218660236|ref|ZP_03516166.1| glucose-inhibited division protein B [Rhizobium etli IE4771]
Length = 139
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 49/89 (55%), Positives = 67/89 (75%)
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V A RI++A I
Sbjct: 1 SGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNARGSVHAIRIEDAHAEI 60
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQKK 168
CD ISARALADLD L+ Y+ PW+ K+
Sbjct: 61 GECDAISARALADLDGLIGYAAPWMLGKE 89
>gi|307747896|gb|ADN91166.1| Ribosomal RNA small subunit methyltransferase G [Campylobacter
jejuni subsp. jejuni M1]
Length = 188
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I + L Y++ + EK++ + L K+++ NL +++ ++ + F
Sbjct: 2 IFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSIK--ILDFYD 58
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 59 FSKAKNIADIGSGAGFPAVFLAFLL----QNNFHLFEPNPKKAAFLRTLKIECELSNLHI 114
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ Q I D+I++RAL D+ LLE
Sbjct: 115 YKEKVQEYQNIFKADIITSRALMDVKPLLEICKNL 149
>gi|86152702|ref|ZP_01070907.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni HB93-13]
gi|121612782|ref|YP_001000676.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81-176]
gi|148926093|ref|ZP_01809779.1| gidB like protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|167005598|ref|ZP_02271356.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81-176]
gi|205356708|ref|ZP_03223469.1| gidB [Campylobacter jejuni subsp. jejuni CG8421]
gi|166224579|sp|A1VZY5|RSMG_CAMJJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85843587|gb|EAQ60797.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87249119|gb|EAQ72080.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81-176]
gi|145845572|gb|EDK22664.1| gidB like protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|205345446|gb|EDZ32088.1| gidB [Campylobacter jejuni subsp. jejuni CG8421]
Length = 188
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 7/155 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I + L Y++ + EK++ + L K+++ NL +++ ++ + F
Sbjct: 2 IFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSIK--ILDFYD 58
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 59 FSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELPNLHI 114
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + D+I++RAL D+ LLE
Sbjct: 115 YKEKVQEYKNTFKADIITSRALMDVKPLLEICKNL 149
>gi|78184194|ref|YP_376629.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CC9902]
gi|123581932|sp|Q3AZ92|RSMG_SYNS9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78168488|gb|ABB25585.1| Glucose inhibited division protein [Synechococcus sp. CC9902]
Length = 243
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIWID 77
S E +++L L +W++K+NL +D+WI V DSL P ID
Sbjct: 19 STEQVDQLATLQTLLREWNEKVNLTRLVEGDDYWINQVFDSLWPLAHELKTPHQPRTCID 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQ-- 133
+G+GGGFPG+ +I L + L++S +K + + + + R V RI+
Sbjct: 79 VGTGGGFPGLAIAIALPG---SHMTLLDSVGRKTAAVEAMASRLGLADRVAVRTERIETT 135
Query: 134 -EAPQMITTCDV 144
D+
Sbjct: 136 GHDRACRGQFDL 147
>gi|86150893|ref|ZP_01069109.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 260.94]
gi|315124485|ref|YP_004066489.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85842063|gb|EAQ59309.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 260.94]
gi|315018207|gb|ADT66300.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 188
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I + L Y++ + EK++ + L K+++ NL +++ ++ + F
Sbjct: 2 IFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSIK--ILDFYD 58
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 59 FSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELSNLHI 114
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ Q I D+I++RAL D+ LLE
Sbjct: 115 YKEKVQEYQNIFKADIITSRALMDVKPLLEICKNL 149
>gi|86150497|ref|ZP_01068722.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596347|ref|ZP_01099584.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 84-25]
gi|218562613|ref|YP_002344392.1| putative methyltransferase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|20177911|sp|Q9PNU3|RSMG_CAMJE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85839092|gb|EAQ56356.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88191188|gb|EAQ95160.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360319|emb|CAL35115.1| putative methyltransferase (GidB homolog) [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|284926227|gb|ADC28579.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni IA3902]
gi|315928356|gb|EFV07671.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930919|gb|EFV09900.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 305]
Length = 188
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 7/155 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I + L Y++ + EK++ + L K+++ NL +++ ++ + F
Sbjct: 2 IFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSIK--ILDFYD 58
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 59 FSKAKNIADIGSGAGFPVVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELPNLHI 114
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + D+I++RAL D+ LLE
Sbjct: 115 YKEKVQEYKNTFKADIITSRALMDVKPLLEICKNL 149
>gi|67458510|ref|YP_246134.1| glucose-inhibited division protein B [Rickettsia felis URRWXCal2]
gi|75537023|sp|Q4UN89|RSMG_RICFE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|67004043|gb|AAY60969.1| Predicted S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia felis URRWXCal2]
Length = 192
Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 4 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLMQYIDNKEIHLVDIG 63
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFPGI+ SI V+LIE+ +K FL + Q ++
Sbjct: 64 SGAGFPGIVLSIA----GVAKVSLIEADLRKCIFLEKASK---ISNNNIQIINQRIEKVE 116
Query: 140 TTCDVISARALADLDTLLE 158
C +++ RA + L+T+
Sbjct: 117 IDCSILTCRAFSKLNTIFN 135
>gi|91206166|ref|YP_538521.1| glucose-inhibited division protein B [Rickettsia bellii RML369-C]
gi|157826532|ref|YP_001495596.1| 16S rRNA methyltransferase GidB [Rickettsia bellii OSU 85-389]
gi|122425160|sp|Q1RGT2|RSMG_RICBR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224608|sp|A8GUR2|RSMG_RICB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91069710|gb|ABE05432.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia bellii RML369-C]
gi|157801836|gb|ABV78559.1| glucose-inhibited division protein B [Rickettsia bellii OSU 85-389]
Length = 192
Score = 63.6 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-ID 77
+V E +EKL+ F L KW+K INL+S ++ ++FW RH+ DSL++ Q I +D
Sbjct: 2 IDVPHEVIEKLQIFQDLVQKWNKAINLISENSTQNFWKRHILDSLQLIQYINDKEIHLVD 61
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG GFPGII SI +LIE+ +K FL + Q +
Sbjct: 62 IGSGAGFPGIILSIA----GVASTSLIEADLRKCIFLEKAAK---ISNNNIQIINQRIEK 114
Query: 138 MITTCDVISARALADLDTLLEYS 160
+C++++ RA ++L+T+ + +
Sbjct: 115 TEISCNILTCRAFSNLNTIFDCT 137
>gi|327398257|ref|YP_004339126.1| Ribosomal RNA small subunit methyltransferase G [Hippea maritima
DSM 10411]
gi|327180886|gb|AEA33067.1| Ribosomal RNA small subunit methyltransferase G [Hippea maritima
DSM 10411]
Length = 195
Score = 63.6 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
EKL + +W+K I L+S L +D+GSG GFP
Sbjct: 23 EKLITYIETLQEWNKNIALISKREENIVNHLVAPSLLFFKFFRDNNLSVVDIGSGAGFPA 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ I S++ V +IE NKKA+FL Y+ K + + RI++ I CDVI+
Sbjct: 83 VVIKIYKPSLD---VIMIEPNNKKAAFLNYICAKLKLKCNIINKRIEQINNPIE-CDVIT 138
Query: 147 ARAL 150
ARAL
Sbjct: 139 ARAL 142
>gi|50955951|ref|YP_063239.1| glucose-inhibited division protein B [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|55976375|sp|Q6ABV7|RSMG_LEIXX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50952433|gb|AAT90134.1| glucose-inhibited division protein B [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 209
Score = 63.6 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F ++ L+ + W RH+ +S + P + D+GSG G PG++ +I
Sbjct: 26 FTANLASQGEERGLIGPLELPRLWSRHILNS-AIVAPLLRPGVVGDVGSGAGLPGLVLAI 84
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
LIE +++ +L V + E ++ D ++ARA++
Sbjct: 85 ARPD---VSFVLIEPMDRRVIWLNEQVAELGLLNVDIVRARAEDAKLAKPLDQVTARAVS 141
Query: 152 DLDTLLEYSFPWLYQ 166
LL + P L
Sbjct: 142 AFRKLLPLTAPLLRD 156
>gi|315058440|gb|ADT72769.1| Ribosomal RNA small subunit methyltransferase G [Campylobacter
jejuni subsp. jejuni S3]
Length = 188
Score = 63.6 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I + L Y++ + EK++ + L K+++ NL +++ ++ + F
Sbjct: 2 IFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSIK--ILDFYD 58
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 59 FSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELPNLHI 114
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + + D+I++RAL D+ LLE
Sbjct: 115 YKKKVQEYKNTFKADIITSRALMDVKPLLEICKNL 149
>gi|157163908|ref|YP_001466523.1| methyltransferase GidB (glucose-inhibited divisionprotein B)
[Campylobacter concisus 13826]
gi|193806436|sp|A7ZCL5|RSMG_CAMC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|112800649|gb|EAT97993.1| methyltransferase GidB [Campylobacter concisus 13826]
Length = 188
Score = 63.6 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
EK++ + +F K++K +L + + + ++ + ID+GSG GFP
Sbjct: 13 EKVKAYAQIFTKFNKVHSLSNYKDISEQV---LDSIKPLEIFDLSAKTAIDVGSGAGFPA 69
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I ++ + + L I K+ S+ + + + + E T D+I+
Sbjct: 70 IFLALAMPQTKWHLFEPIAKKSSFLSYAK---IELGLQNLEVHSQKIELADKFT-ADLIT 125
Query: 147 ARALADLDTLLEYSFPW 163
+RAL+ L++ +
Sbjct: 126 SRALSKTKELIKICEGF 142
>gi|303248043|ref|ZP_07334309.1| glucose inhibited division protein [Desulfovibrio fructosovorans
JJ]
gi|302490600|gb|EFL50505.1| glucose inhibited division protein [Desulfovibrio fructosovorans
JJ]
Length = 232
Score = 63.6 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 50/164 (30%), Gaps = 21/164 (12%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
++ + L + L ++ +KINLV V DS + P
Sbjct: 24 LAPDQAALLAGYLQLLTRFRRKINLVGPQDWPTMLETLVADSWHLADFLAGPEAKRVLPP 83
Query: 76 -------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D G+G G PGI G L+ES+ K+ FL + G
Sbjct: 84 GDALVLGLDFGAGAGLPGIGLRAFF---NRGPYYLLESRQKRCVFLAEATARLHLSGVHV 140
Query: 129 ACRIQE------APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A E + +RA A L + +
Sbjct: 141 AEGRVERTVPDILAGHPGAFVLCLSRAFAPWPRFLTLCRELVRE 184
>gi|42528013|ref|NP_973111.1| glucose-inhibited division protein B [Treponema denticola ATCC
35405]
gi|55976458|sp|Q73JU8|RSMG_TREDE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|41819058|gb|AAS13030.1| glucose-inhibited division protein B [Treponema denticola ATCC
35405]
Length = 254
Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 64/199 (32%), Gaps = 41/199 (20%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEY----FYFLFLKWSKKINLVSSSTVEDFWIR 57
K SN IL L ++ + KL + ++ NLV E+ +
Sbjct: 9 KDLLSNGILLKG--LKELGINEKAHNKLSKLLNIYMRELKMFNASFNLVKVKDDEELIVA 66
Query: 58 HVEDSLRVFQLHPY---------------------------PSIWIDLGSGGGFPGIITS 90
H+ DSL ++ P D G+G GFPG+ +
Sbjct: 67 HILDSLSAWRFFYNETKNTESKTSLNNAETKNTNEALLTSEPFYIADAGTGAGFPGVPLA 126
Query: 91 IQLSSIEG--GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
S+ ++LIE K+ +FL + E D+++ R
Sbjct: 127 ALFISLGNLDVKLSLIERMQKRCTFLENIKAVLQLNNTEIIESEAEKAPQN-KFDIVTCR 185
Query: 149 ALADLDT-----LLEYSFP 162
A LD LL + P
Sbjct: 186 AFHTLDKHILQTLLNLAKP 204
>gi|157964123|ref|YP_001498947.1| 16S rRNA methyltransferase GidB [Rickettsia massiliae MTU5]
gi|189040815|sp|A8F0G4|RSMG_RICM5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157843899|gb|ABV84400.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia massiliae MTU5]
Length = 193
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 5 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 64
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PGI+ SI V+LIE+ +K FL + Q ++
Sbjct: 65 SGSGLPGIVLSIA----GVAQVSLIEADLRKCIFLEKASK---ISNNNIQIINQRIEKIE 117
Query: 140 TTCDVISARALADLDTLLE 158
C +++ RA ++L+T+
Sbjct: 118 IDCSILTCRAFSNLNTIFN 136
>gi|283850758|ref|ZP_06368045.1| glucose inhibited division protein [Desulfovibrio sp. FW1012B]
gi|283574001|gb|EFC21974.1| glucose inhibited division protein [Desulfovibrio sp. FW1012B]
Length = 232
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 21/165 (12%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--------- 70
+++ E + + L ++ K+NLV + E V DS V
Sbjct: 23 HLTPEQAGTISGYLGLLARFRSKVNLVGPADWETVLATLVADSWHVADFLSGPAGAAVLP 82
Query: 71 ---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P + +D G+G G PGI + G L+E++ K+A FL V + G
Sbjct: 83 PAGRPVLGLDFGAGAGLPGIPLRAFF---DRGEYVLLEAREKRAFFLAEAVARLGLSGLS 139
Query: 128 FACRIQE------APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A E + + +RA A L +
Sbjct: 140 VAEGRVEDTVPGIVARHPDAFVLCVSRAFAPWPQFLALCRRIVRP 184
>gi|34580956|ref|ZP_00142436.1| glucose inhibited division protein B [Rickettsia sibirica 246]
gi|28262341|gb|EAA25845.1| glucose inhibited division protein B [Rickettsia sibirica 246]
Length = 191
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PGI+ SI V+LIE+ +K FL + Q ++
Sbjct: 63 SGSGLPGIVLSIA----GVAQVSLIEADLRKCIFLEKASK---ISNNNIQIINQRIEKVE 115
Query: 140 TTCDVISARALADLDTLLE 158
C +++ RA ++L+T+
Sbjct: 116 IDCSILTCRAFSNLNTIFN 134
>gi|153952100|ref|YP_001397922.1| methyltransferase GidB [Campylobacter jejuni subsp. doylei 269.97]
gi|166224578|sp|A7H342|RSMG_CAMJD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152939546|gb|ABS44287.1| methyltransferase GidB [Campylobacter jejuni subsp. doylei 269.97]
Length = 188
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 7/155 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I + L Y++ + EK++ + L K+++ NL +++ ++ + F
Sbjct: 2 IFKDYDFLQNYDL-KNFGEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSIK--ILDFYD 58
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+GSG GFP + + L +L E KK +FLR + +
Sbjct: 59 FSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKTAFLRTLKIECELSNLHI 114
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + D+I++RAL D+ LLE
Sbjct: 115 YKEKVQEYKNTFKADIITSRALMDIKPLLEICTNL 149
>gi|255322058|ref|ZP_05363206.1| 16S rRNA methyltransferase GidB [Campylobacter showae RM3277]
gi|255300871|gb|EET80140.1| 16S rRNA methyltransferase GidB [Campylobacter showae RM3277]
Length = 185
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ R+ + F + K+++ +L S + + + L +F ID
Sbjct: 2 KIDLPRDFDAQTAKFSEILAKFNRVHSLTSYKNLNEQIADSIA-PLEIFPQILDAKTAID 60
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+GSG GFP I ++ L E L E KK++FL YV + +V +C+I++
Sbjct: 61 VGSGAGFPAIFLAMILRECEWH---LFEPSPKKSAFLSYVKAELNLTNVRVKSCKIEDGE 117
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
+I++RAL LL +
Sbjct: 118 PFAAQ--LITSRALMKTKDLLGICNGF 142
>gi|126641595|ref|YP_001084579.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ATCC
17978]
Length = 159
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
++H+ DSL + + P + +D+G+GGG PG+I ++ L++S KK F
Sbjct: 1 MLVKHLLDSLSILKDLPAGRL-LDVGTGGGMPGMIIALCQPE---RSCVLLDSNGKKIRF 56
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMI---TTCDVISARALADLDTLLEYSFPWLYQK 167
L+ + + + E I DVI++RA A L +E + P+L+++
Sbjct: 57 LKQFIADLKLKNVIAVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPYLHEQ 113
>gi|15892008|ref|NP_359722.1| glucose-inhibited division protein B [Rickettsia conorii str.
Malish 7]
gi|229586297|ref|YP_002844798.1| 16S rRNA methyltransferase GidB [Rickettsia africae ESF-5]
gi|20138266|sp|Q92JI2|RSMG_RICCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|259495619|sp|C3PM95|RSMG_RICAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15619123|gb|AAL02623.1| glucose inhibited division protein B [Rickettsia conorii str.
Malish 7]
gi|228021347|gb|ACP53055.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia africae ESF-5]
Length = 192
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 4 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 63
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PGI+ SI V+LIE+ +K FL + Q ++
Sbjct: 64 SGSGLPGIVLSIA----GVAQVSLIEADLRKCIFLEKASK---ISNNNIQIINQRIEKVE 116
Query: 140 TTCDVISARALADLDTLLE 158
C +++ RA ++L+T+
Sbjct: 117 IDCSILTCRAFSNLNTIFN 135
>gi|123966888|ref|YP_001011969.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9515]
gi|123201254|gb|ABM72862.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9515]
Length = 220
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSIWIDLGSGGGF 84
+ + + K NL +D+WI V DSL F+ + +ID+GSG GF
Sbjct: 3 FQELRIRIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFIDIGSGCGF 62
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACRIQEAPQ---MI 139
PG +I + E L++S KK L+ ++++ + V RI+ +
Sbjct: 63 PGFAYAITHPNSEIY---LVDSSKKKTDSLKEIIKRMNFKNNIFVINDRIENVGRQSSFK 119
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ +ARA+++ T+ EY P L Q
Sbjct: 120 KSFNIATARAVSNPSTVAEYILPMLEQ 146
>gi|325474767|gb|EGC77953.1| ribosomal RNA small subunit methyltransferase G [Treponema
denticola F0402]
Length = 249
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 62/194 (31%), Gaps = 36/194 (18%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEY----FYFLFLKWSKKINLVSSSTVEDFWIR 57
K S+ IL L ++ + KL + ++ NLV E+ +
Sbjct: 9 KDLLSDGILLKG--LKELGINEKAHNKLSKLLNIYMRELKMFNASFNLVKVKDDEELIVS 66
Query: 58 HVEDSLRVFQLHPY----------------------PSIWIDLGSGGGFPGIITSIQLSS 95
HV DSL + P D G+G G PGI + S
Sbjct: 67 HVLDSLSAWHFFYNETKNTESNTTSKNDNDDLLRKEPFYIADAGTGAGLPGIPLAALFIS 126
Query: 96 IEG--GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADL 153
+ ++LIE K+ +FL + E D+++ RA L
Sbjct: 127 LGNLDVKLSLIERMQKRCTFLENIKAVLQLNNTEIIESEAEKAPQN-KFDIVTCRAFRTL 185
Query: 154 DT-----LLEYSFP 162
D LL + P
Sbjct: 186 DKHILNTLLNLAKP 199
>gi|167951229|ref|ZP_02538303.1| hypothetical protein Epers_34650 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 120
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L +++ L KW++ NL + + RH+ DSL + +D+G+G G PG
Sbjct: 9 DQLLHYHALLHKWNQAFNLTAVRDPLEMIDRHLLDSLSLLPYVE-GKRVLDMGTGAGLPG 67
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
I +I L + L++S KK F+R + + + R++
Sbjct: 68 IPLAICLPQTQ---FVLLDSNGKKIRFVRQAMMELGLQNVEPVQARLEAYQP 116
>gi|13508297|ref|NP_110247.1| methyltransferase GidB [Mycoplasma pneumoniae M129]
gi|2498409|sp|P75220|RSMG_MYCPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1673955|gb|AAB95932.1| methyltransferase GidB [Mycoplasma pneumoniae M129]
gi|301633434|gb|ADK86988.1| 16S rRNA methyltransferase GidB [Mycoplasma pneumoniae FH]
Length = 191
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 7/142 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRH---VEDSLRVFQLHPYPSIWIDLGSGGGF 84
KL+ + L ++ NL T + + + + + + DLGSG G
Sbjct: 5 KLKQYVQLVQTANQNFNLTGLKTEGEIYEHLVQEIIELFNEYDSYFDHKKVADLGSGNGC 64
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG+I + I+ ++LI+SK+KK +FL+ V+Q D
Sbjct: 65 PGVILKLLFPQIK--TLDLIDSKHKKVNFLKEVIQTLELNNT--QALCARIENHTEQYDT 120
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
+ +R L + + ++ L
Sbjct: 121 LCSRGLGSIIEVNAFALKLLKP 142
>gi|255521620|ref|ZP_05388857.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL
J1-175]
Length = 82
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 31/67 (46%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDT 72
Query: 77 DLGSGGG 83
G G
Sbjct: 73 ICDVGAG 79
>gi|116071160|ref|ZP_01468429.1| Glucose inhibited division protein [Synechococcus sp. BL107]
gi|116066565|gb|EAU72322.1| Glucose inhibited division protein [Synechococcus sp. BL107]
Length = 243
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPSIWID 77
S E +++L L +W+ K+NL +D+WI V DSL P +D
Sbjct: 19 STEQVDQLAMLQVLLREWNAKVNLTRLVEGDDYWINQVFDSLWPLAAELNKPHQPRTCMD 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQ-- 133
+G+GGGFPG+ +I L + L++S +K + + + K R V RI+
Sbjct: 79 VGTGGGFPGLAIAIALPG---AHMTLLDSVGRKTAAVEAMASKLGLADRVAVRTERIETT 135
Query: 134 -EAPQMITTCDV 144
D+
Sbjct: 136 GHDRACRGQFDL 147
>gi|206603438|gb|EDZ39918.1| Putative glucose-inhibited division protein B [Leptospirillum sp.
Group II '5-way CG']
Length = 210
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 8/153 (5%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PY 71
+ N ++ ET+ +L F + W++ I L D V + L
Sbjct: 10 VFNQFHFDSETINRLSEFVEVLASWNQHIRLSGYREKADIRQHLVTEPLLAAHYFGLASS 69
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D GSG G PGII SI + ++L+E K KK SFL YV+ + + F
Sbjct: 70 LCSIVDFGSGNGSPGIIFSILYPHLR---ISLVERKQKKLSFLSYVISRLNLQNTTFYDN 126
Query: 132 IQEA--PQMITTCDVISARALADLDTLLEYSFP 162
I+ A Q + I +A++ E S P
Sbjct: 127 IRSALTAQQAPSSTEIWMKAVSMQSLFSELSRP 159
>gi|148243045|ref|YP_001228202.1| 16S rRNA methyltransferase GidB [Synechococcus sp. RCC307]
gi|166989556|sp|A5GVE0|RSMG_SYNR3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147851355|emb|CAK28849.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Synechococcus sp. RCC307]
Length = 237
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRVFQLHPYPSIWIDL 78
S + L++ L +W+ K+NL ED+WI + D L+ + P ID+
Sbjct: 15 SSDQLQQFNRLQELLREWNGKVNLTRLVEGEDYWISQIFDSLWPLQPWLSKGEPLKVIDV 74
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
G+GGGFPG+ +I L + + L++S +K ++ + +V
Sbjct: 75 GTGGGFPGLAIAIALPQAQ---LTLVDSVGRKVQAVQAMADALGLTERV 120
>gi|124516566|gb|EAY58074.1| putative glucose-inhibited division protein B [Leptospirillum
rubarum]
Length = 210
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVFQLHPY 71
+ N ++ ET+ +L + + W++ I L D V + + F L
Sbjct: 10 VFNRLHLGSETINRLSEYVEILASWNQHIRLSGYREKTDIRQHLVWEPLLAAQYFGLASS 69
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D GSG G PGII SI + V+L+E K KK SFL YV+ + F
Sbjct: 70 LCSIVDFGSGNGSPGIIFSILYPHL---HVSLVERKQKKLSFLSYVISRLKLENATFYDN 126
Query: 132 IQE--APQMITTCDVISARALADLDTLLEYSFP 162
I+ A Q ++C I +A++ LE S P
Sbjct: 127 IRTALAAQKTSSCTEIWMKAISMQSLFLELSRP 159
>gi|260436464|ref|ZP_05790434.1| 16S rRNA methyltransferase GidB [Synechococcus sp. WH 8109]
gi|260414338|gb|EEX07634.1| 16S rRNA methyltransferase GidB [Synechococcus sp. WH 8109]
Length = 243
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPSIWID 77
SR ++L L W++++NL +DFWI V DSL Q P WID
Sbjct: 19 SRAQRDQLVELQGLLHSWNERVNLTRLVNGDDFWIGQVFDSLWPLAGELQSADEPQNWID 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQ-- 133
+G+GGGFPG+ +I L + V L++S +K + + + R +V RI+
Sbjct: 79 VGTGGGFPGLAIAIALPQAQ---VTLLDSVGRKTAAVEAMASSLGLADRVRVRTERIETT 135
Query: 134 -EAPQMITTCD 143
+ D
Sbjct: 136 GRDRHFRGSFD 146
>gi|33862031|ref|NP_893592.1| putative glucose inhibited division protein B [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|55976486|sp|Q7V016|RSMG_PROMP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33634249|emb|CAE19934.1| putative glucose inhibited division protein B [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 239
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPSIWIDLGSG 81
+ + + K NL +D+WI V DSL F + +ID+GSG
Sbjct: 19 IIMFRELQIKIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENTNKNFDNKKFIDIGSG 78
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ---M 138
GFPG +I + E LV+ + K + + K V RI+ +
Sbjct: 79 CGFPGFAYAITHPNSEIYLVDSSKKKTDSLKEIIKSI-KFKNDIFVINDRIENIGRQSSF 137
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
++ +ARA+++ T+ EY P L
Sbjct: 138 KNGFNIATARAVSNPSTVSEYILPMLK 164
>gi|57505846|ref|ZP_00371771.1| methyltransferase GidB [Campylobacter upsaliensis RM3195]
gi|57015876|gb|EAL52665.1| methyltransferase GidB [Campylobacter upsaliensis RM3195]
Length = 191
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+++E + L K+++ NL +++ +E + F D+GSG GFP
Sbjct: 13 LQRVEIYKNLLKKFNQIHNLTQLKNIDENIQDSIE--ILNFIDLTKAQNIADIGSGAGFP 70
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
I S L L E KKA+FLR V + + + + D I
Sbjct: 71 AIFLSFLL----DSRFYLFEPNAKKAAFLRSVKIECELKNLTIFKEKVQNHKTEFKADFI 126
Query: 146 SARALADLDTLLEYSFPWLYQK 167
++RAL L++ +L +
Sbjct: 127 TSRALMRAKDLIQICR-FLSDE 147
>gi|148274157|ref|YP_001223718.1| 16S rRNA methyltransferase GidB [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166224582|sp|A5CVC1|RSMG_CLAM3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147832087|emb|CAN03060.1| putative methyltransferase, cell division protein [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 211
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +V+RE F + +++ L+ W RHV +S+ V L P +
Sbjct: 20 DRIDVARE-------FTAQLGQRGEELGLIGPLEPPRLWSRHVINSVLVAPL-LRPGLVG 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+G+G G PG++ +I ++ LIE ++ ++L V A V R +E
Sbjct: 72 DIGTGAGLPGLVLAIARPDVD---FVLIEPMERRVAWLEEQVAHLALGNVSVRRARAEEV 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
Q D ++ARA++ L+ + P +
Sbjct: 129 AQEFNL-DQVTARAVSAFAKLIPLTVPLVK 157
>gi|257458048|ref|ZP_05623207.1| 16S rRNA methyltransferase GidB [Treponema vincentii ATCC 35580]
gi|257444761|gb|EEV19845.1| 16S rRNA methyltransferase GidB [Treponema vincentii ATCC 35580]
Length = 231
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 11/139 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---------QLHPYPSIWID 77
+ L + ++ NL+ ++ I+H+ DSL + D
Sbjct: 27 DMLSRYIRELETFNAVFNLIKVQNTQELIIKHILDSLAPWEFLAEWIDTHQAEGRCTIAD 86
Query: 78 LGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
+GSG G PGI + + LIE +K+ + L + +
Sbjct: 87 IGSGAGLPGIPLACLFLLKDPSIEFTLIERMHKRCAVLENIQAMLELTNTAILES-EVEK 145
Query: 137 QMITTCDVISARALADLDT 155
D+ RA LD
Sbjct: 146 ASADYFDIAVFRAFRPLDR 164
>gi|78213571|ref|YP_382350.1| methyltransferase GidB [Synechococcus sp. CC9605]
gi|123577673|sp|Q3AHY7|RSMG_SYNSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78198030|gb|ABB35795.1| methyltransferase GidB [Synechococcus sp. CC9605]
Length = 243
Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPSIWID 77
S+ ++LE L W++++NL +DFWI V DSL Q P WID
Sbjct: 19 SQAQRDQLEELQGLLQSWNERVNLTRLVNGDDFWIGQVFDSLWPLAGELQSANEPQHWID 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQ-- 133
+G+GGGFPG+ +I L + V L++S +K + + + R V RI+
Sbjct: 79 VGTGGGFPGLAIAIALPQAQ---VTLLDSVGRKTAAVEAMASSLGLADRVGVRTERIETT 135
Query: 134 -EAPQMITTCD 143
+ D
Sbjct: 136 GRDRHFRGSFD 146
>gi|209526668|ref|ZP_03275192.1| methyltransferase GidB [Arthrospira maxima CS-328]
gi|209492904|gb|EDZ93235.1| methyltransferase GidB [Arthrospira maxima CS-328]
Length = 251
Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 11/131 (8%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWID 77
S LE Y L ++++NL + FW +H+ DSLR ID
Sbjct: 23 SDRQLEMFNVLYEQILAGNQRLNLTRITDPVGFWEKHLWDSLRGVVPWLSGDKLPLRVID 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACRIQ 133
+G+G GFPG+ +I + + E V L++S KK +FL+ ++ + + I
Sbjct: 83 IGTGAGFPGVPIAIAIPTAE---VTLLDSTGKKIAFLQTLIPRLGLENAIPYLGRVEAIA 139
Query: 134 EAPQMITTCDV 144
+ + D+
Sbjct: 140 QQSDHRQSYDL 150
>gi|116073720|ref|ZP_01470982.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9916]
gi|116069025|gb|EAU74777.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9916]
Length = 250
Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIWID 77
S E + E L+W+ ++NL EDFWI + DSL Q P ID
Sbjct: 23 SAEQRHQFEALQQELLRWNARVNLTRLLEREDFWIAQILDSLWPLQDELRTPNAPRRCID 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQ-- 133
+G+GGGFPG+ +I L + + L++S +K + + + + R ++ R++
Sbjct: 83 VGTGGGFPGLAVAIALPGAQ---LTLVDSVGRKTAAVLAMAEAIGLKERVRIRTERVELT 139
Query: 134 -EAPQMITTCDV 144
D+
Sbjct: 140 GRDRGCRGQFDL 151
>gi|71894174|ref|YP_278282.1| glucose-inhibited division protein B [Mycoplasma synoviae 53]
Length = 207
Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGGGF 84
E + L + +K INL S E W + +SL +D+GSG GF
Sbjct: 2 DFEKYVSLIEEHNKNINLTGFS-GESLWEEGILNSLLYMNSSTKDKSEIKILDIGSGVGF 60
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
P I ++ + + I+ + + ++ + T + ++ R +E Q DV
Sbjct: 61 PAIPYALLRENNSIDIFEPIQKRVDFLNLVKQ--KLTLDKVNIYKQRAEEFSQKNI-YDV 117
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
+ ARA+ + T+L +F + K
Sbjct: 118 VVARAVGSVKTMLMAAFHLVALK 140
>gi|332298997|ref|YP_004440919.1| Ribosomal RNA small subunit methyltransferase G [Treponema
brennaborense DSM 12168]
gi|332182100|gb|AEE17788.1| Ribosomal RNA small subunit methyltransferase G [Treponema
brennaborense DSM 12168]
Length = 224
Score = 60.9 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 22/152 (14%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-----------WI 76
KL+ + ++ +L + T +D ++HV DSL +
Sbjct: 26 KLDAYVRELEMFNAAYDLCGADTRDDIVVKHVLDSLSAANRVKKFADAVQAEAGRSALIA 85
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+GSGGG PGI + ++ G LIE +K+ +FL + V +
Sbjct: 86 DVGSGGGLPGIPLAA---ALSGHRFVLIERMSKRCAFLENCIAILGLTNVSVENTEAERV 142
Query: 136 PQMITTCDVISARALADLDT-----LLEYSFP 162
T D+ RA LD LL P
Sbjct: 143 --FPETADIAVFRAFRPLDKKMIRTLLRIVKP 172
>gi|42561430|ref|NP_975881.1| glucose-inhibited division protein B [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|81618795|sp|Q6MS67|RSMG_MYCMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|42492928|emb|CAE77523.1| glucose-inhibited division protein B [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|301320699|gb|ADK69342.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 137
Score = 60.9 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIW 75
+ +++E KL+ +Y + ++ ++K NL + + + + +H DSL Q
Sbjct: 12 KNFTINQEIKNKLDLYYQILIQENQKYNLTRITELNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
D+G+G GFPGI+ I +I+ + LIES NKKA+FL+Y+VQK ++ R +E
Sbjct: 72 ADIGTGAGFPGIVLKIFFPNIK---LTLIESNNKKANFLKYLVQKLELNNVEILNKRAEE 128
Query: 135 APQMIT 140
+
Sbjct: 129 LNEYKE 134
>gi|294155312|ref|YP_003559696.1| S-adenosyl-L-methionine dependent methyltransferase [Mycoplasma
crocodyli MP145]
gi|291600437|gb|ADE19933.1| S-adenosyl-L-methionine dependent methyltransferase [Mycoplasma
crocodyli MP145]
Length = 232
Score = 60.9 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 10/147 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGG 82
+ + ++ + + +K +NL + W + +SL P+ +D+G+G
Sbjct: 18 FQNFDTYFQMIEETNKVLNLTGF-EGDKLWQEGIYESLVFMLEVTETIKPNNILDIGAGA 76
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMIT 140
GFP I ++ + + + E K+ FL V+ K +VF R ++ +
Sbjct: 77 GFPSIPYALTNPKQK---ITIYEPLKKRVDFLNQVITKLNLNNSVEVFPFRSEDIKKKNI 133
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
D+++ARA+ D+ T+L SF + K
Sbjct: 134 -FDLVTARAVGDVATMLMSSFHLVSLK 159
>gi|88854494|ref|ZP_01129161.1| glucose-inhibited division protein B [marine actinobacterium
PHSC20C1]
gi|88816302|gb|EAR26157.1| glucose-inhibited division protein B [marine actinobacterium
PHSC20C1]
Length = 211
Score = 60.9 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 4/141 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++ + + +++ L+ V W RH+ + + V L P + D+GSG G P
Sbjct: 22 IDLARQYTESLARRGEELGLIGPLEVSRLWTRHIVNCVLVAPL-LKPGLVGDIGSGAGLP 80
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G++ +I +E LIE ++ +L + + I
Sbjct: 81 GLVLAIARPDVE---FVLIEPMERRVDWLTSESARLGLENVTIDRSRSQDAPYSEALSQI 137
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+ARA+ L L+ + L
Sbjct: 138 TARAVTALSKLIPATEHLLSP 158
>gi|158520421|ref|YP_001528291.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
gi|158509247|gb|ABW66214.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
Length = 490
Score = 60.9 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +S L++L ++ L K + ++NL E+ ++ DS+ L PS +
Sbjct: 28 SGIVLSDAGLKQLWSYHCLLRKHNPELNLTRIHNFENMVLKLYVDSILPGTLVDLPSPLL 87
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+G G PGI I + V L E + K+ +FL VQ+ G R AP
Sbjct: 88 DLGTGPGMPGIPLKIAFPEL---TVLLAEGRGKRVAFLNTAVQELGLYGVSVIGRAI-AP 143
Query: 137 QMITTCDVISARALADLDTLLE 158
+ RA+ + LE
Sbjct: 144 DFQEPVAGVITRAVEAMAATLE 165
>gi|237752962|ref|ZP_04583442.1| methyltransferase GidB [Helicobacter winghamensis ATCC BAA-430]
gi|229375229|gb|EEO25320.1| methyltransferase GidB [Helicobacter winghamensis ATCC BAA-430]
Length = 187
Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
+S E LE + + L W+ +L + +D +++E+SL +D+
Sbjct: 3 LSTAQQELLENYTQMLLSWNAIHSLSGAKDTKDI-QKNIENSLYPLSKIDLGHKHLLLDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFP I I L L E KKA+FL+ + + + E+ ++
Sbjct: 62 GSGNGFPAIPLHIAL----RIPTILCEPNAKKAAFLQNIKATLKLQNLSIQRKKIESLEL 117
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
D+I++RA LLE +
Sbjct: 118 KNLPDLITSRATFATKVLLEKCKHCIKD 145
>gi|206896370|ref|YP_002247455.1| 16S rRNA methyltransferase GidB [Coprothermobacter proteolyticus
DSM 5265]
gi|206738987|gb|ACI18065.1| 16S rRNA methyltransferase GidB [Coprothermobacter proteolyticus
DSM 5265]
Length = 210
Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 9/142 (6%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
E L+ F T ED W +EDSL V +D+G GGG
Sbjct: 3 QEEHLKQFASKLWLTDYLH---GYRTPEDLWTFGIEDSLAVLNHVELRGRVLDIGPGGGL 59
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ-MITTC 142
PGI+ +I L ++ L++S K FL + +V RI++ +
Sbjct: 60 PGIVLAIVLRDVQ---FTLVDSSQKSCKFLTEITSALGLTNVQVLHERIEDFGKVHREEY 116
Query: 143 DVISARALADLDTLLEY-SFPW 163
D +RA+A++ L EY + P
Sbjct: 117 DFAISRAVAEIRILAEYVAAPL 138
>gi|166989747|sp|Q4A6Q0|RSMG_MYCS5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|144574982|gb|AAZ43571.2| glucose inhibited division protein B [Mycoplasma synoviae 53]
Length = 225
Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGGGF 84
E + L + +K INL S E W + +SL +D+GSG GF
Sbjct: 20 DFEKYVSLIEEHNKNINLTGFS-GESLWEEGILNSLLYMNSSTKDKSEIKILDIGSGVGF 78
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
P I ++ + + I+ + + ++ + T + ++ R +E Q DV
Sbjct: 79 PAIPYALLRENNSIDIFEPIQKRVDFLNLVKQ--KLTLDKVNIYKQRAEEFSQKNI-YDV 135
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
+ ARA+ + T+L +F + K
Sbjct: 136 VVARAVGSVKTMLMAAFHLVALK 158
>gi|315638028|ref|ZP_07893213.1| glucose inhibited division protein B [Campylobacter upsaliensis
JV21]
gi|315481876|gb|EFU72495.1| glucose inhibited division protein B [Campylobacter upsaliensis
JV21]
Length = 186
Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+++E + L K+++ NL +++ +E + F D+GSG GFP
Sbjct: 13 LQRVEIYKNLLKKFNQIHNLTQLKNIDENIQDSIE--ILNFIDLTKAQNIADIGSGAGFP 70
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
I S L L E KK++FLR V + + + + D I
Sbjct: 71 AIFLSFLL----DSRFYLFEPNAKKSAFLRSVKIECELKNLHIIKEKVQNHKAEFKADFI 126
Query: 146 SARALADLDTLLEYSFPWLYQK 167
++RAL L++ +L +
Sbjct: 127 TSRALMKAKDLIQICR-FLSDE 147
>gi|330723493|gb|AEC45863.1| 16S rRNA methyltransferase GidB [Mycoplasma hyorhinis MCLD]
Length = 204
Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 21 VSRETL-EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYPSIW 75
V+ E + +LE F L + +K +NL + + W + +S + L
Sbjct: 12 VNNEQIFSQLEKFVSLIEQKNKVMNLTGFTQ-DQLWKEGIYESIITLKQSIYLKNKKIAL 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G+G GFP I I S I+ + ++E K+ FL+ V Q+ ++ A
Sbjct: 71 LDVGAGAGFPSIPFFIINSDIK---LVIVEKLKKRCDFLQLVKQELNLDFEIINDL---A 124
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
+ D I+AR + +LD L + +
Sbjct: 125 SNLQAKFDYITARVVGNLDFLFKITKKL 152
>gi|328951744|ref|YP_004369079.1| Ribosomal RNA small subunit methyltransferase G [Marinithermus
hydrothermalis DSM 14884]
gi|328452068|gb|AEB12969.1| Ribosomal RNA small subunit methyltransferase G [Marinithermus
hydrothermalis DSM 14884]
Length = 182
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+LE + L ++ + ++L S +E+ W H+E +L + P+ +D+GSGGG PGI
Sbjct: 5 RLEAYVELLRRYGQTLDLASPRVLENPW-PHLEAALAYAEPIPHGEAVLDVGSGGGLPGI 63
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVIS 146
+I +E + L E + ++A+FL V +V+ + + ++
Sbjct: 64 PLAIARPDLE---ITLAEVRKRRAAFLELAVHHLGLTNVRVYNG---DVRKWSGRVAYVT 117
Query: 147 ARALADLDTLLEYSFP 162
A+A+A +
Sbjct: 118 AQAVASFADVYRIVRH 133
>gi|154174377|ref|YP_001408663.1| methyltransferase GidB [Campylobacter curvus 525.92]
gi|193806437|sp|A7GZM1|RSMG_CAMC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|112802117|gb|EAT99461.1| methyltransferase GidB [Campylobacter curvus 525.92]
Length = 186
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 11/144 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+ S +T F + K+++ +L + ++ + + L YP ID+G
Sbjct: 7 DFSEQT----AKFTQILAKFNRVHSLTNYKNFDEQISDSI---SPLKWLKFYPETAIDVG 59
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFP I ++ L L K+ S+++ + V +C+I+ +
Sbjct: 60 SGAGFPAIFLAMILKDCRWWLFEPNAKKSSFLSYVK--AELNLKNVSVKSCKIEACEPFV 117
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+I++RAL LL+ +
Sbjct: 118 AQ--LITSRALMKTKELLKICRGF 139
>gi|183222814|ref|YP_001840810.1| glucose-inhibited division protein B [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912846|ref|YP_001964401.1| glucose inhibited division protein B [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|193806445|sp|B0S902|RSMG_LEPBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238687847|sp|B0SRZ9|RSMG_LEPBP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167777522|gb|ABZ95823.1| Glucose inhibited division protein B [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167781236|gb|ABZ99534.1| Glucose-inhibited division protein B [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 247
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 17/153 (11%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------LHPYPSIWIDLG 79
E ++ FY + ++K S + E RH+ +SL + D+G
Sbjct: 27 WELVKNFYDFLKRDNEKGGFFSKNDSEKILERHILESLIFVWKLKTTGYVSRETNVADVG 86
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV-----QKTAARGKVFACRIQE 134
+G G PG + ++ + V L++S+ +K + L + K R + R +E
Sbjct: 87 TGPGLPGFLFAV---LKKAPQVFLVDSQKRKLALLEAEITTGSLSKVKKRVEFIYARTEE 143
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV+++RA+ L E + + QK
Sbjct: 144 IS---SNFDVVTSRAMVPYPYLAEVTTRMVKQK 173
>gi|42525228|ref|NP_970608.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
gi|81829095|sp|Q6MGL7|RSMG3_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase G 3;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 3; Short=16S rRNA m7G
methyltransferase 3
gi|39577439|emb|CAE81262.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
Length = 221
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED----SLRVFQLHPYPSIW 75
++S + +L+ ++ LK+++ +NL+S+ TV H D S + + +P
Sbjct: 22 DLSPDLRTRLKTYHEELLKFNRTLNLISAKTVFVADALHFADSIMASQAIMKSNPSLDKI 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
DLGSG GFPG+I ++ ++ V L+E KK FL +V V I+
Sbjct: 82 YDLGSGNGFPGMIFALLYPKVQ---VVLVEFDQKKCEFLNHVAGVLKLSNVTVENRTIES 138
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + AR LA++ + + + +
Sbjct: 139 FPDGSMKY--VMARGLANISKSIMMTRKVVPK 168
>gi|283954548|ref|ZP_06372067.1| hypothetical protein C414_000230048 [Campylobacter jejuni subsp.
jejuni 414]
gi|283793952|gb|EFC32702.1| hypothetical protein C414_000230048 [Campylobacter jejuni subsp.
jejuni 414]
Length = 188
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVF 66
I + L Y++ ++ +K++ + L K+++ NL +++ ++ DS + F
Sbjct: 2 IFQTYDFLQNYDL-KDFEKKVKIYKELLQKFNRIHNLTHLKNIDE----NILDSVKILNF 56
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT-AARG 125
D+GSG GFP I + L +L E KKA+FLR + +
Sbjct: 57 YDFSKAKNIADIGSGAGFPAIFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELLNL 112
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
++ ++QE D+I++RAL D+ LLE
Sbjct: 113 HIYKEKVQECKNTF-KADIITSRALMDIKPLLEICKNL 149
>gi|284052796|ref|ZP_06383006.1| 16S rRNA methyltransferase GidB [Arthrospira platensis str. Paraca]
Length = 192
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWID 77
S L+ Y L ++++NL + FW +H+ DSLR ID
Sbjct: 26 SDRQLQIFNVLYEQILAGNQRLNLTRITDPVGFWEKHLWDSLRGVAPWLSGDKLPLRVID 85
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACRIQ 133
+G+G GFPGI +I + E V L++S KK +FL+ +V + + I
Sbjct: 86 IGTGAGFPGIPIAIAIPQAE---VTLLDSTGKKIAFLQALVPRLGLENAIPYLGRVEAIA 142
Query: 134 EAPQMITTCDV 144
+ T D+
Sbjct: 143 QQSDHRQTYDL 153
>gi|238650524|ref|YP_002916376.1| glucose-inhibited division protein B [Rickettsia peacockii str.
Rustic]
gi|238624622|gb|ACR47328.1| glucose-inhibited division protein B [Rickettsia peacockii str.
Rustic]
Length = 191
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
V RE ++KLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VPREIIKKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PGI+ SI V+LIE+ +K FL + Q ++
Sbjct: 63 SGSGLPGIVLSIA----GVAQVSLIEADLRKCIFLEKASK---ISNNNIQIINQRIEKVE 115
Query: 140 TTCDVISARALADLDTLLE 158
C +++ RA ++L+T+
Sbjct: 116 IDCSILTFRAFSNLNTIFN 134
>gi|158319051|ref|YP_001511559.1| 16S rRNA methyltransferase GidB [Frankia sp. EAN1pec]
gi|158114456|gb|ABW16653.1| methyltransferase GidB [Frankia sp. EAN1pec]
Length = 306
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 54/150 (36%), Gaps = 21/150 (14%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----------LRVFQLHPYPSIWIDLGS 80
+ + + L+ W RH+ +S +D+GS
Sbjct: 62 RYVEMLSTAGVERGLIGPRETGRLWERHLLNSAVLAEAVPTRSASPGSDEAALEVVDVGS 121
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQM 138
G G PGI ++ + V L+E ++ FL V + + +V R + ++
Sbjct: 122 GAGLPGIPLALARPDLR---VTLLEPMERRCRFLAEAVAELGLAGQVEVVRGRAPDVAEL 178
Query: 139 IT--TCDVISARALADL----DTLLEYSFP 162
T DV ARA+A L LL + P
Sbjct: 179 PPHRTFDVTVARAVAPLGRLGAVLLPMTRP 208
>gi|313681128|ref|YP_004058867.1| methyltransferase gidb [Oceanithermus profundus DSM 14977]
gi|313153843|gb|ADR37694.1| methyltransferase GidB [Oceanithermus profundus DSM 14977]
Length = 180
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++LE + L +++ NLVS + + H + ++ P +D+GSG G P
Sbjct: 2 KDRLEAYAELLERYAASANLVSPKVLAEL-PVHFAAARAYGEVLPEGVHVLDVGSGAGLP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV 144
I +I + + L E + K+A+FL + +V+ + Q
Sbjct: 61 AIPLAIARPDL---TLTLAERRAKRAAFLDLAAARLGLENVRVYNG---DVQQWSGRTAY 114
Query: 145 ISARALADLDTLLEYSFP 162
++A+A+A D +
Sbjct: 115 VTAQAVAPFDVVYRLVAH 132
>gi|291565702|dbj|BAI87974.1| putative glucose inhibited division protein B [Arthrospira
platensis NIES-39]
Length = 254
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWID 77
S L+ Y L ++++NL + FW +H+ DSLR ID
Sbjct: 26 SDRQLQIFNVLYEQILAGNQRLNLTRITDPVGFWEKHLWDSLRGVAPWLSGDKLPLRVID 85
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FACRIQ 133
+G+G GFPGI +I + E V L++S KK +FL+ +V + + I
Sbjct: 86 IGTGAGFPGIPIAIAIPQAE---VTLLDSTGKKIAFLQTLVPRLGLENAIPYLGRVEAIA 142
Query: 134 EAPQMITTCDV 144
+ T D+
Sbjct: 143 QQSDHRQTYDL 153
>gi|71894003|ref|YP_279449.1| 16S rRNA methyltransferase GidB [Mycoplasma hyopneumoniae J]
gi|123645392|sp|Q4A933|RSMG_MYCHJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71852130|gb|AAZ44738.1| glucose inhibited division protein B [Mycoplasma hyopneumoniae J]
Length = 202
Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--------PYPSIWID 77
E LE + L +K NL + S + W + +S+ +D
Sbjct: 15 FENLEKYVNLIEFSNKNFNLTAFS-GDILWKEGIFESIFTMNFIVGLVNNKENKKLKILD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFP I I IE + + ES K+ FL+ V +K + + +QE
Sbjct: 74 IGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDVSEKLDLKFNLICKPVQEINP 130
Query: 138 MITTCDVISARALADLDTLLEYS 160
D+I+ARA+A+L+ L + +
Sbjct: 131 Q--KFDIITARAVANLEKLEKIT 151
>gi|302340302|ref|YP_003805508.1| methyltransferase GidB [Spirochaeta smaragdinae DSM 11293]
gi|301637487|gb|ADK82914.1| methyltransferase GidB [Spirochaeta smaragdinae DSM 11293]
Length = 223
Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 19/169 (11%)
Query: 6 SNSILRA--NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+++ + + +++ S K E + L W++K+ LV +V++ RH+ DSL
Sbjct: 1 MRELIKQALDAVAWSFDASMAQ--KCEVYLKELLFWNRKVGLVKMESVDELVFRHLYDSL 58
Query: 64 RVFQ-------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
L S +D+GSGGGFP I ++ L L+E +KA FL+
Sbjct: 59 APLPLLEASGLLPGPGSGVVDIGSGGGFPAIPLALALPR---YEYTLVERSGRKAGFLQN 115
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
V +V +A + + + RA ++ + P L
Sbjct: 116 AVALLGVADRV-HILQVDAETLGARWQLATCRAFRPVNE----ALPILA 159
>gi|72080982|ref|YP_288040.1| 16S rRNA methyltransferase GidB [Mycoplasma hyopneumoniae 7448]
gi|123644618|sp|Q4A772|RSMG_MYCH7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71914106|gb|AAZ54017.1| glucose inhibited division protein B [Mycoplasma hyopneumoniae
7448]
Length = 202
Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--------PYPSIWID 77
E LE + L +K NL + S + W + +S+ +D
Sbjct: 15 FENLEKYVNLIEFSNKNFNLTAFS-GDILWKEGIFESIFTMNFIVGLVNNKENKKLKILD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFP I I IE + + ES K+ FL+ + +K + + +QE
Sbjct: 74 IGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDISEKLDLKFNLICKPVQEIDP 130
Query: 138 MITTCDVISARALADLDTLLEYS 160
D+I+ARA+A+L+ L + +
Sbjct: 131 Q--KFDIITARAVANLEKLEKIT 151
>gi|42523138|ref|NP_968518.1| methyltransferase gidB [Bdellovibrio bacteriovorus HD100]
gi|39575343|emb|CAE79511.1| Methyltransferase gidB [Bdellovibrio bacteriovorus HD100]
Length = 288
Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS ++L +FY L + +K N + D I+H DS+ + + +D+G+
Sbjct: 65 VSHSQRQQLAHFYRLLMLNQEKENFTRLLKLRDVAIKHFIDSIIIMKYTDLQFPLLDVGT 124
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G GFPGI I + L ++ + + +R + +
Sbjct: 125 GPGFPGIPLKIMYPDQQILLGEGVQRRVEFLKHVRSEMNLKNLDILGRNINKHCVYPVRG 184
Query: 141 TCDVISARAL 150
RA+
Sbjct: 185 ----AITRAV 190
>gi|54020291|ref|YP_116184.1| 16S rRNA methyltransferase GidB [Mycoplasma hyopneumoniae 232]
gi|81603603|sp|Q5ZZN1|RSMG_MYCH2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53987464|gb|AAV27665.1| glucose inhibited division protein B [Mycoplasma hyopneumoniae 232]
Length = 202
Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--------PYPSIWID 77
E LE + L +K NL + S + W + +S+ +D
Sbjct: 15 FENLEKYVNLIEFSNKNFNLTAFS-GDILWKEGIFESIFTMNFIVGLVNNKENKKLKILD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFP I I IE + + ES K+ FL+ + +K + + +QE
Sbjct: 74 IGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDISEKLDLKFNLICKPVQEINP 130
Query: 138 MITTCDVISARALADLDTLLEYS 160
D+I+ARA+A+L+ L + +
Sbjct: 131 Q--KFDIITARAVANLEKLEKIT 151
>gi|222824126|ref|YP_002575700.1| glucose inhibited division protein B [Campylobacter lari RM2100]
gi|222539348|gb|ACM64449.1| glucose inhibited division protein B [Campylobacter lari RM2100]
Length = 197
Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + +++ + L K++ NL ++ I ++ +
Sbjct: 1 MKIYEEQLNFLKDFANKDDFYQRIILYKELLKKFNAVHNLTHLEDIDGNIIDSIK--ILD 58
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSG GFP I + L + L K ++ +
Sbjct: 59 YCDLTDKKKIVDIGSGAGFPAIFLACILENSSFFLFEPSVKKASFLRVIK--TELNLINI 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ ++Q P D+I++RAL D+ L+E S + +K
Sbjct: 117 NIIKEKLQNHPSF--KVDLITSRALMDIKPLIEISNGFYDEK 156
>gi|195953331|ref|YP_002121621.1| glucose inhibited division protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932943|gb|ACG57643.1| glucose inhibited division protein [Hydrogenobaculum sp. Y04AAS1]
Length = 176
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLGSGGGFPGI 87
E + LKW+K L+S + + RH++D+ +F D+G+G GF G+
Sbjct: 8 EIYINEILKWNKVHKLISKADESKIFERHIKDAEEIFYKLKDFDIKEIADVGAGAGFLGV 67
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ SI ++ V+LIE KK +FL ++ K +V +
Sbjct: 68 VFSILDKDLK---VSLIEVVAKKCAFLEHIKVKLGLNYEVLCKDATRLEKTFEAT---IE 121
Query: 148 RALADLDTLL 157
RA ++
Sbjct: 122 RAFGKPLDIV 131
>gi|242092572|ref|XP_002436776.1| hypothetical protein SORBIDRAFT_10g008640 [Sorghum bicolor]
gi|241914999|gb|EER88143.1| hypothetical protein SORBIDRAFT_10g008640 [Sorghum bicolor]
Length = 190
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--------- 75
++ + L+W++++NL + + + RHV DSL +
Sbjct: 57 QQRQVTIYVDTLLEWNQRMNLTAVTDEAEVMTRHVADSLAMLPPLERAYRGRSTSAGGSI 116
Query: 76 -----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
ID+GSG G PG+I ++ S + L+ES K+ +FL + V+ V
Sbjct: 117 DGVSLIDVGSGAGLPGLILAVARPSWK---FTLLESMRKRCTFLEHAVEAMELSNVNVVC 173
Query: 130 CRIQEAPQMITT 141
R ++ +++ +
Sbjct: 174 DRDRKLAKVLIS 185
>gi|118474743|ref|YP_892709.1| methyltransferase GidB [Campylobacter fetus subsp. fetus 82-40]
gi|193806438|sp|A0RR76|RSMG_CAMFF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118413969|gb|ABK82389.1| methyltransferase GidB [Campylobacter fetus subsp. fetus 82-40]
Length = 182
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N+ K+ F + +++K +L + ++ + + L P I ID+G
Sbjct: 2 NLPDNFWNKVSEFEIILKQFNKIHSLTNYRDIKPVVE---DSMKPLEFLDFNPKIVIDVG 58
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFP I S+ L+S E L I K+ S++ V +I+ ++
Sbjct: 59 SGAGFPAIFLSLILNSSEFHLYEPIAKKSSFLSYVG--AALNLKNITVHPSKIESCQKI- 115
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
D+I++RAL+ L+E +
Sbjct: 116 -KADLITSRALSKTLFLIEICRGF 138
>gi|297570163|ref|YP_003691507.1| methyltransferase GidB [Desulfurivibrio alkaliphilus AHT2]
gi|296926078|gb|ADH86888.1| methyltransferase GidB [Desulfurivibrio alkaliphilus AHT2]
Length = 269
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 71/201 (35%), Gaps = 55/201 (27%)
Query: 16 LNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------ 67
L + E + +L ++ LKWS++INLV+++ + H DSL ++
Sbjct: 13 LQQLGLPPEPAAIARLCRYHEELLKWSRRINLVAAAPPRELLATHFLDSLTLWPLLADLP 72
Query: 68 ---------------------------------------LHPYPSIWIDLGSGGGFPGII 88
+D+G+G GFPG+
Sbjct: 73 VNDHRAPPLAAIKPAHKGTDLISVPDHPSPSRLQQPALAGDCSRLSLLDVGTGAGFPGLA 132
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMIT----TC 142
E V L+E + K+ SFLR+V++ + +V A R++
Sbjct: 133 LKCWRP--EALAVTLMEPRAKRVSFLRHVIRTLKLQEGTQVLAQRLEPVTDSQEAPADRF 190
Query: 143 DVISARALADLDTLLEYSFPW 163
+I++RA + L P
Sbjct: 191 ALITSRAFTAIAPFLALCAPL 211
>gi|261885825|ref|ZP_06009864.1| methyltransferase GidB [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 182
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N+ K+ F + +++K +L + ++ + + L P I ID+G
Sbjct: 2 NLPDNFWNKVREFEIILKQFNKIHSLTNYRDIKPVVE---DSMKPLEFLDFNPKIVIDVG 58
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFP I S+ L+S E L I K+ S++ V +I+ ++
Sbjct: 59 SGAGFPAIFLSLILNSSEFHLYEPIAKKSSFLSYVG--AALNLKNITVHPSKIESCQKI- 115
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
D+I++RAL+ L+E +
Sbjct: 116 -KADLITSRALSKTLFLIEICRGF 138
>gi|193806325|sp|Q6MMJ3|RSMG2_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase G 2;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 2; Short=16S rRNA m7G
methyltransferase 2
Length = 255
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS ++L +FY L + +K N + D I+H DS+ + + +D+G+
Sbjct: 32 VSHSQRQQLAHFYRLLMLNQEKENFTRLLKLRDVAIKHFIDSIIIMKYTDLQFPLLDVGT 91
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G GFPGI I + L ++ + + +R + +
Sbjct: 92 GPGFPGIPLKIMYPDQQILLGEGVQRRVEFLKHVRSEMNLKNLDILGRNINKHCVYPVRG 151
Query: 141 TCDVISARAL 150
RA+
Sbjct: 152 ----AITRAV 157
>gi|293363890|ref|ZP_06610626.1| 16S rRNA methyltransferase GidB [Mycoplasma alligatoris A21JP2]
gi|292552380|gb|EFF41154.1| 16S rRNA methyltransferase GidB [Mycoplasma alligatoris A21JP2]
Length = 230
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---IDLGSGG 82
E LE ++ L + +K +NL + W + +SL + +D+G+G
Sbjct: 18 FEDLEKYFSLVTETNKVLNLTGF-EGDKLWEEGIYESLLFIDKIVTKTDSKTLLDIGAGA 76
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
GFP I +I +++ + I+ + + + + ++FA R ++
Sbjct: 77 GFPSIPYAIVNKNLKITIYEPIKKRVDFLNTVVDTLS-LEKNVQIFALRAEDVKDKN-CF 134
Query: 143 DVISARALADLDTLLEYSFPWL 164
D+++ARA+ D+ T+L SF +
Sbjct: 135 DLVTARAVGDVSTMLMSSFHLI 156
>gi|33865160|ref|NP_896719.1| 16S rRNA methyltransferase GidB [Synechococcus sp. WH 8102]
gi|55976484|sp|Q7U8J1|RSMG_SYNPX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33638844|emb|CAE07141.1| putative glucose inhibited division protein B [Synechococcus sp. WH
8102]
Length = 248
Score = 57.8 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 12/129 (9%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----IDLGS 80
L +L+ L W+ ++NL +D+WI V DSL Q ID+G+
Sbjct: 27 QLGQLKALQDLLRSWNSRVNLTRLVEGDDYWINQVFDSLWPLQTELRSPHQSRLAIDVGT 86
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-----FACRIQEA 135
GGGFPG+ +I + L++S +K + ++ +V +V
Sbjct: 87 GGGFPGLAVAIAMPGARM---TLLDSVGRKTAAVQAMVNDLGLSDRVSVRTDRIESAGHD 143
Query: 136 PQMITTCDV 144
+ D+
Sbjct: 144 RTLRGGFDL 152
>gi|284931679|gb|ADC31617.1| ribosomal RNA small subunit methyltransferase G (glucose-inhibited
division protein B) [Mycoplasma gallisepticum str. F]
Length = 242
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 13/166 (7%)
Query: 10 LRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH-----VEDSL 63
L + L ++ + +E + +F ++ NL T E +
Sbjct: 4 LIKDSLGKFNLTLTDKQIEDIAFFLEEIYHSNQLFNLTGYKTKELIAEMLGVKTILLAQS 63
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G G PG+I I + V L++S KK +F+ V++K
Sbjct: 64 LSYIFSNQSLNVIDIGTGAGIPGLIIKIIYPQLN---VYLVDSNAKKITFINEVIKKLNF 120
Query: 124 RGK-VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
G R+++ + D + ++A++ + L E L
Sbjct: 121 TGVFAILSRVEDNFFLKKYHGCFDYVFSQAVSKIAVLNELGTQLLK 166
>gi|116748593|ref|YP_845280.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
gi|193806435|sp|A0LHE3|RSMG2_SYNFM RecName: Full=Ribosomal RNA small subunit methyltransferase G 2;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 2; Short=16S rRNA m7G
methyltransferase 2
gi|116697657|gb|ABK16845.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
Length = 498
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+ +L ++ L +++ ++NL + ++ DSL L PS +DLG+G G P
Sbjct: 36 IGQLWTYHQLLREFNPELNLTRIHNFANMVLKLYVDSLLPMNLVELPSPLMDLGTGPGMP 95
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV 144
GI I + +E + L ES+ K+A+FL+ V++ + +V + + ++
Sbjct: 96 GIPIKIAMPELE---IVLAESRQKRAAFLKMAVERLKLEKVEVVGKSVGSSFEVPVK--G 150
Query: 145 ISARALADLDTLLE 158
+ RA+ + LE
Sbjct: 151 VITRAVESVGATLE 164
>gi|239946970|ref|ZP_04698723.1| 16S rRNA methyltransferase GidB [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921246|gb|EER21270.1| 16S rRNA methyltransferase GidB [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 190
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLG 79
+ RE +EKLE F L KW+K INLVS +++ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 IPREIIEKLEIFQKLVKKWNKSINLVS-NSIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 61
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFPGI+ SI V+LIE+ +K FL + Q ++
Sbjct: 62 SGSGFPGIVLSIA----GVAKVSLIEADLRKCIFLEKASK---ISNNNIQIINQRIEKVE 114
Query: 140 TTCDVISARALADLDTLLE 158
C +++ RA ++L+T+
Sbjct: 115 IDCSILTCRAFSNLNTIFN 133
>gi|31544848|ref|NP_853426.1| ribosomal RNA small subunit methyltransferase G [Mycoplasma
gallisepticum str. R(low)]
gi|20177907|sp|Q9KX67|RSMG_MYCGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|7109685|gb|AAF36756.1| glucose inhibited division protein B [Mycoplasma gallisepticum]
gi|31541694|gb|AAP56994.1| ribosomal RNA small subunit methyltransferase G (glucose-inhibited
division protein B) [Mycoplasma gallisepticum str.
R(low)]
gi|284930923|gb|ADC30862.1| ribosomal RNA small subunit methyltransferase G (glucose-inhibited
division protein B) [Mycoplasma gallisepticum str.
R(high)]
Length = 242
Score = 57.0 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 13/166 (7%)
Query: 10 LRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH-----VEDSL 63
L + L ++ + +E + +F ++ NL T E +
Sbjct: 4 LIKDSLGKFNLTLTDKQIEDIAFFLEEIYHSNQLFNLTGYKTKELIAEMLGVKTILLAQS 63
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G G PG+I I + V L++S KK +F+ V++K
Sbjct: 64 LSYIFSNQSLNVIDIGTGAGIPGLIIKIIYPQLN---VYLVDSNAKKITFINEVIKKLNF 120
Query: 124 RGK-VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
G R+++ + D + ++A++ + L E L
Sbjct: 121 TGVFAILSRVEDNFFLKKYHGYFDYVFSQAVSKIAVLNELGTQLLK 166
>gi|28212474|gb|AAO37613.1| glucose inhibited division protein B [Mycoplasma gallisepticum]
Length = 242
Score = 57.0 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 13/166 (7%)
Query: 10 LRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH-----VEDSL 63
L + L ++ + +E + +F ++ NL T E +
Sbjct: 4 LIKDSLGKFNLTLTDKQIEDIAFFLEEIYHSNQLFNLTGYKTKELIAEMLGVKTILLAQS 63
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G G PG+I I + V L++S KK +F+ V++K
Sbjct: 64 LSYIFSNQSLNVIDIGTGAGIPGLIIKIIYPQLN---VYLVDSNAKKITFINEVIKKLNF 120
Query: 124 RGK-VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
G R+++ + D + ++A++ + L E L
Sbjct: 121 TGVFAILSRVEDNFFLKKYHGYFDYVFSQAVSKIAVLNELGTQLLK 166
>gi|283956395|ref|ZP_06373875.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 1336]
gi|283792115|gb|EFC30904.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 1336]
Length = 188
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 7/155 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I + L Y++ + EK++ + L K+++ NL +++ ++ + F
Sbjct: 2 IFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDENIFDSIK--ILDFYD 58
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 59 FSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELSNLHI 114
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + D+I++R+L D+ LLE
Sbjct: 115 YKEKVQECKNTFKADIITSRSLMDVKPLLEICKNL 149
>gi|224417923|ref|ZP_03655929.1| glucose-inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|253827262|ref|ZP_04870147.1| glucose-inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|313141464|ref|ZP_07803657.1| glucose inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|253510668|gb|EES89327.1| glucose-inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|313130495|gb|EFR48112.1| glucose inhibited division protein B [Helicobacter canadensis MIT
98-5491]
Length = 190
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPS 73
++ ++ + + LE + L L+W+ +L + ++ + ++DSL + +
Sbjct: 2 SFILTTQANQALETYAKLLLEWNGIHSLSGARDLQSVYKN-IQDSLYPLEFLGEVLRNKT 60
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D+GSG GFP + I L G V L E KKA+FL+ + + + + +
Sbjct: 61 KLFDVGSGNGFPAVALGIAL----GIEVVLCEPNAKKAAFLQNLKSQLGLKNFMILRQRV 116
Query: 134 EAPQMITTCDVISARALADLDTLLEYS 160
E ++ D+I++RA ++ L+ +
Sbjct: 117 EEVKLDKKPDLITSRATFSVEDFLKKT 143
>gi|288921190|ref|ZP_06415476.1| methyltransferase GidB [Frankia sp. EUN1f]
gi|288347397|gb|EFC81688.1| methyltransferase GidB [Frankia sp. EUN1f]
Length = 302
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 17/154 (11%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----------YPSIW 75
LE + L + L+ W RH+ +S + + P
Sbjct: 53 LELAVQYAELLATAGVERGLIGPRETGRLWSRHLLNSAVLAEAVPTAADLPGASGRVPEV 112
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQ 133
+D+GSG G PG+ ++ + V L+E ++ FL VV + +V R
Sbjct: 113 VDVGSGAGLPGVPLALARPDLR---VTLLEPMERRCRFLSEVVAQLGLEEQIEVVRGRAP 169
Query: 134 EAPQMIT--TCDVISARALADLDTLLEYSFPWLY 165
+ Q DV ARA+A L L P
Sbjct: 170 DLAQRPPHRDFDVSVARAVAPLGRLGAVLLPMTR 203
>gi|242309357|ref|ZP_04808512.1| glucose inhibited division protein [Helicobacter pullorum MIT
98-5489]
gi|239523928|gb|EEQ63794.1| glucose inhibited division protein [Helicobacter pullorum MIT
98-5489]
Length = 161
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSIW 75
N+ E +KLE + + L+W+K +L + ++ + +++EDSL ++
Sbjct: 2 NLGVEISKKLEDYAIMLLEWNKIHSLSGAKSL-EMIQKNIEDSLYPLEIESLKLRDKKFL 60
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+GSG GFP I I L S V L E KKA+FL+ V + + E
Sbjct: 61 FDVGSGNGFPAIPLGIVLGSK----VILCEPNAKKAAFLQNVKVELGLENFCVMRQKVEQ 116
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
M D+I++RA + L + ++
Sbjct: 117 ITMEDKPDIITSRATFGVSEFLVKCQKIISKE 148
>gi|330890257|gb|EGH22918.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. mori
str. 301020]
Length = 77
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++S E+L + L +KW+K NL + ++ RH+ DSL
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLS 64
>gi|330898615|gb|EGH30034.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 75
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++S E+L + L +KW+K NL + ++ RH+ DSL
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLS 64
>gi|228988710|ref|ZP_04148795.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771022|gb|EEM19503.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 144
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQE----APQMITTCDVISARALADLDTL 156
+ +++S K+ +FL ++ QK F E + D++ ARA+A L L
Sbjct: 1 MTIVDSLQKRINFLNHLAQKLELSEVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVL 60
Query: 157 LEYSFPWLY 165
E P +
Sbjct: 61 SELCLPLVK 69
>gi|313616476|gb|EFR89370.1| ribosomal RNA small subunit methyltransferase G [Listeria innocua
FSL S4-378]
Length = 131
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 113 FLRYVVQKTAA-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
FL + +K + R + + D+++ARA+A + L E P + +
Sbjct: 1 FLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 58
>gi|86606331|ref|YP_475094.1| 16S rRNA methyltransferase GidB [Synechococcus sp. JA-3-3Ab]
gi|123506189|sp|Q2JTZ8|RSMG_SYNJA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86554873|gb|ABC99831.1| methyltransferase GidB [Synechococcus sp. JA-3-3Ab]
Length = 260
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 34/154 (22%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-------FQLHPYPSIWIDLGSGGGFP 85
Y L + ++ NL + DFW +H+ DSLR ++ P ID+G+G GFP
Sbjct: 41 YSLVMAGNRTQNLTRITDPIDFWEKHLWDSLRGLRLLGSWDEIQAQPWRGIDIGTGAGFP 100
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITT 141
GI I L L++S +K +F++ V+Q+ + + E PQ +
Sbjct: 101 GIPAQIALP---QAHFTLLDSSQRKIAFVQEVLQQLSLAQARAVAQRAEIWGQDPQERGS 157
Query: 142 CDV----------ISARALADLDTLLEYSFPWLY 165
D+ I A EY P L
Sbjct: 158 YDLALARAVAAAEICA----------EYCLPLLK 181
>gi|315185861|gb|EFU19626.1| methyltransferase GidB [Spirochaeta thermophila DSM 6578]
Length = 214
Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 8/149 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S+L L + + L + L +W +I+LV+ + E + H+ DSL
Sbjct: 6 SLLDRGLALLGLSPTPSQRAALLSYLHLLAEWGSRIDLVADPSPEALVV-HLLDSLAPLP 64
Query: 68 LHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
S DLGSG G PGI +I +E LV E + + V AR
Sbjct: 65 HLRAFLSSPLADLGSGAGLPGIPLAIMNPHLEVLLVEAREKRAVFLEHVLLSVD--LARC 122
Query: 126 KVFACRIQEAPQMITTCDVISARALADLD 154
V R+++ P + ARA L
Sbjct: 123 TVLHARLEDLPLHVP---CAVARAFLPLS 148
>gi|330898616|gb|EGH30035.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 135
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGG PGI +I + V L++S KK F V + E+ Q
Sbjct: 1 AGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAESYQ 57
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 58 PEVPFDGIISRAFSSLEDFTGWTRHM 83
>gi|330890258|gb|EGH22919.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. mori str.
301020]
Length = 134
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGG PGI +I + V L++S KK F V + E+ Q
Sbjct: 1 GSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAESYQP 57
Query: 139 ITTCDVISARALADLDTLLEYSFPW 163
D I +RA + L+ ++
Sbjct: 58 EVPFDGIISRAFSSLEDFTGWTRHM 82
>gi|150021215|ref|YP_001306569.1| methyltransferase GidB [Thermosipho melanesiensis BI429]
gi|189040728|sp|A6LMN3|RSMG_THEM4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149793736|gb|ABR31184.1| methyltransferase GidB [Thermosipho melanesiensis BI429]
Length = 209
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
++ + + + NL + E+ + DSL + ++D+G+GGG PG+
Sbjct: 7 IKNYIKEIV--NAPFNLTAIKNEEEAFHLLALDSLLPLEKMNLIGNFLDVGTGGGVPGVF 64
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISA 147
I ++ LI++ KK ++++ V K + RI+E I D + +
Sbjct: 65 IGIMFKKLK---GTLIDASRKKINYVKNVCIKLGIDNLEFVHGRIEEQIDFIEKFDNVFS 121
Query: 148 RALADLDTLLEYSFPWLY 165
+A+A+L +LE + P+
Sbjct: 122 KAVAELRIILELTVPYAK 139
>gi|153806708|ref|ZP_01959376.1| hypothetical protein BACCAC_00979 [Bacteroides caccae ATCC 43185]
gi|149131385|gb|EDM22591.1| hypothetical protein BACCAC_00979 [Bacteroides caccae ATCC 43185]
Length = 139
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLG+GGGFPGI +I + LV+ I K + A+ + + R +E
Sbjct: 1 MDLGTGGGFPGIPLAILFPETKFHLVDSIGKKVRVATEVANAIG--LKNVTFRHARAEEE 58
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
Q+ D + +RA+ L L++ + K+
Sbjct: 59 KQL---FDFVVSRAVMPLADLIKIIKKNISPKQ 88
>gi|255520542|ref|ZP_05387779.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J1-175]
Length = 129
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 116 YVVQKTAA-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +K + R + + D+++ARA+A + L E P + +
Sbjct: 2 ALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 56
>gi|307718007|ref|YP_003873539.1| methyltransferase [Spirochaeta thermophila DSM 6192]
gi|306531732|gb|ADN01266.1| putative methyltransferase [Spirochaeta thermophila DSM 6192]
Length = 214
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 61/160 (38%), Gaps = 10/160 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S+L L + + L + L +W +I+LV+ + + H+ DSL
Sbjct: 6 SLLDRGLALLGLSPTPSQRAALLSYLHLLAEWGARIDLVADPSP-EALAVHLLDSLAPLP 64
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
S DLGSG G PGI +I +E LV + + V AR
Sbjct: 65 HLRALLSSPLADLGSGAGLPGIPLAIMNPHLEVLLVEARGKRAVFLEHVLLSVD--LARC 122
Query: 126 KVFACRIQEAPQMITTCDVISARALADL--DTLLEYSFPW 163
V R+++ P + ARA L DTL Y P
Sbjct: 123 TVLHARLEDLPLHVP---CAVARAFLPLSPDTLPLYLHPL 159
>gi|225571870|ref|ZP_03780740.1| hypothetical protein CLOHYLEM_07844 [Clostridium hylemonae DSM
15053]
gi|225159475|gb|EEG72094.1| hypothetical protein CLOHYLEM_07844 [Clostridium hylemonae DSM
15053]
Length = 66
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ IL+ +++ E+ E FY L ++W+K +NL + E+ +H DSL
Sbjct: 1 MSKILKTKLQELNISINDRQEEQFEQFYDLLIEWNKVMNLTGITEYEEVVEKHFVDSLS 59
>gi|229082695|ref|ZP_04215143.1| Ribosomal RNA small subunit methyltransferase G [Bacillus cereus
Rock4-2]
gi|228700614|gb|EEL53152.1| Ribosomal RNA small subunit methyltransferase G [Bacillus cereus
Rock4-2]
Length = 138
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQE----APQMITTCDVISARALADLDTLLEYSFP 162
K+ +FL ++ QK F E + + D++ ARA+A L L E P
Sbjct: 1 MQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMARAVARLSVLSELCLP 60
Query: 163 WLY 165
+
Sbjct: 61 LVK 63
>gi|77410352|ref|ZP_00786760.1| Unknown [Streptococcus agalactiae COH1]
gi|77171039|gb|EAO74500.1| Unknown [Streptococcus agalactiae COH1]
Length = 130
Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 101 VNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTL 156
+ +I+S NK+ +FL + + F R ++ Q D+++ARA+A + L
Sbjct: 6 ITIIDSLNKRINFLNILANELELSGVHFFHGRAEDFGQDKVFRAKFDIVTARAVARMQVL 65
Query: 157 LEYSFPWLY 165
E + P+L
Sbjct: 66 AELTIPFLK 74
>gi|187918051|ref|YP_001883614.1| methyltransferase GidB [Borrelia hermsii DAH]
gi|238689280|sp|B2RZN8|RSMG_BORHD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119860899|gb|AAX16694.1| methyltransferase GidB [Borrelia hermsii DAH]
Length = 207
Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQL--HP 70
L VS E+++KL+++ L + + NLVS + + D + H DS+ F +
Sbjct: 9 LKNLGVSFTSESIDKLKFYIKRVLLFGSRFNLVSKNDLRFDAVLLHALDSVVGFPIIKDN 68
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P +D+GSG GFPGII +I +S + L+E NKK +FLR + +
Sbjct: 69 NPHQVLDVGSGAGFPGIILAIFDNSRK---YVLLERSNKKVTFLRMMSLELGLDNVKVLE 125
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + I+ RA D+ L
Sbjct: 126 R--DVADEKDKYEFITIRAFRDIREYASILRLILKN 159
>gi|94265413|ref|ZP_01289165.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
[delta proteobacterium MLMS-1]
gi|93454070|gb|EAT04405.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
[delta proteobacterium MLMS-1]
Length = 463
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 67/180 (37%), Gaps = 51/180 (28%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------------- 76
E ++ LKW +++NLV+ + + H DSL + L +
Sbjct: 229 ELYFRELLKWHRRVNLVARAPEPELLELHFLDSLTILPLCRFEPPPTGSPVVTDHEVRLP 288
Query: 77 ---------------------------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
D+GSG GFPG++ + + L+E + K
Sbjct: 289 PVAPSPARTAAGLPGTADSAKDAGSLLDIGSGAGFPGLVLKCCRPEL---ALTLLEPRQK 345
Query: 110 KASFLRYVVQKTAARG--KVFACRIQ----EAPQMITTCDVISARALADLDTLLEYSFPW 163
+ +FLR V++ T + +V A R+ Q +I+ RA+A + L+ P
Sbjct: 346 RVAFLRQVLRVTGLKAGCEVLAQRLVPGGGALAQRRWP--LITGRAVASVADFLDLCAPL 403
>gi|157273313|gb|ABV27212.1| methyltransferase GidB [Candidatus Chloracidobacterium
thermophilum]
Length = 247
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--------- 68
+S + L Y L + + + NL + H D L
Sbjct: 36 GLPLSTSQVAALASHYCLLGEANNQFNLTRLIAPAEAVRWHYLDILAALPYLTALAVEGT 95
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGK 126
+ W+D+GSGGGFPG++ ++ + L E + KKA+FL++ V++ A R +
Sbjct: 96 NGKLVRWVDVGSGGGFPGLVLAVACPNW---HFILAERRAKKAAFLQHCVEELALGGRVQ 152
Query: 127 VFACRIQ 133
VFA +
Sbjct: 153 VFAGDFE 159
>gi|161833806|ref|YP_001598002.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
GWSS]
gi|189040725|sp|A8Z655|RSMG_SULMW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152206296|gb|ABS30606.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
GWSS]
Length = 212
Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
++ + ++ + ++K Y + ++KKIN++S++++ F+ RH+ +
Sbjct: 1 MKERIFNKYFPDLDKSIIKKFIKLYKIHKFFNKKINIISNNSLNFFYERHILHSLCVYKI 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
SI ID+G+GGGFPGI ++ + + LI+S KK + ++++ +
Sbjct: 61 CYFLNKSIIIDVGTGGGFPGIPLALLFNKTK---FILIDSIEKKIKIINLIIKELHLKNV 117
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEY 159
C C+ I RA+ L +
Sbjct: 118 YVKCT--RIENFHNKCNFIIGRAVTKLPNFIRL 148
>gi|293977917|ref|YP_003543347.1| putative S-adenosylmethionine-dependent methyltransferase
[Candidatus Sulcia muelleri DMIN]
gi|292667848|gb|ADE35483.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Candidatus Sulcia muelleri
DMIN]
Length = 208
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVF 66
++ + ++ + ++K Y + ++KKIN++S++++ F+ RH+ +
Sbjct: 1 MKERIFNKYFPDLDKSIIKKFMKLYKIHKFFNKKINIISNNSLNFFYERHILHSLCVYKI 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
SI ID+G+GGGFPGI ++ + + LI+S KK + ++++ +
Sbjct: 61 CYFLNKSIIIDVGTGGGFPGIPLALLFNKTK---FILIDSIEKKIKIINLIIKELHLKNV 117
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFP-WLYQKK 168
C C+ I RA+ L + +L+QKK
Sbjct: 118 YVKCT--RIENFHNKCNFIIGRAVTKLPNFIRLVKKNFLFQKK 158
>gi|332296663|ref|YP_004438586.1| Ribosomal RNA small subunit methyltransferase G [Thermodesulfobium
narugense DSM 14796]
gi|332179766|gb|AEE15455.1| Ribosomal RNA small subunit methyltransferase G [Thermodesulfobium
narugense DSM 14796]
Length = 207
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 11 RANYLLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED---SLRV 65
+ N L Y N ++ L+++ + ++K+ +LVS ++VE+F+ +HV D +
Sbjct: 12 KFNLLFKKYLSNFTKY-LDEISLYSEKLFLYNKRHSLVSFNSVEEFFFKHVYDSLFPTVL 70
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
++D+G+G G PG+I SI L+E K K+ FL V+ +
Sbjct: 71 CPDFFSTKEFLDIGTGAGIPGLILSICFPESLW---ILLEPKYKRVIFLEGVILELDIKN 127
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLL 157
VF R++ ++ + +RA L +
Sbjct: 128 AIVFQERLENLKEIPER---VISRATFPLKKMF 157
>gi|302341711|ref|YP_003806240.1| glucose inhibited division protein [Desulfarculus baarsii DSM 2075]
gi|301638324|gb|ADK83646.1| glucose inhibited division protein [Desulfarculus baarsii DSM 2075]
Length = 210
Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + + + L+W++ I LV + + W+ D L P +D+G+
Sbjct: 24 LPADFWPQCQTLLEELLRWNQSIRLVGHRAMGEAWLNLALDGLA-MVPLLGPGRLLDIGA 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQM 138
G GFPG++ ++ ++ V +I+ + KK SF ++ + +V R E
Sbjct: 83 GAGFPGLVLAL---ALPALTVTMIDGRAKKVSFQKHAARLLGLGSRVAPVVGRAGEGALA 139
Query: 139 ITTCDVISARALADLDTLLEYSFPW 163
+ D +S RA+ D+ L + P+
Sbjct: 140 GQSFDFVSLRAVTDVAGSLALARPF 164
>gi|217077737|ref|YP_002335455.1| methyltransferase GidB [Thermosipho africanus TCF52B]
gi|217037592|gb|ACJ76114.1| methyltransferase GidB [Thermosipho africanus TCF52B]
Length = 212
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + + + + +NL + +E + DSL + + + ++D+G+GGG
Sbjct: 4 EKKQVILKYLKEII--NAPLNLTAIKELELAYQLLAMDSLIPLRENDVGNNFLDVGTGGG 61
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ I + G LV+ K + + + RI+E +I D
Sbjct: 62 VPGVFIGIMFENSRGLLVDSSRKKIDFVREV--CNKLNLNNLEFLNARIEEKKDLIEKFD 119
Query: 144 VISARALADLDTLLEYSFPWLY 165
+ +RA+A+L +LE + P+
Sbjct: 120 SVFSRAVAELRVILELTVPFSK 141
>gi|319944932|ref|ZP_08019194.1| glucose inhibited division protein B [Lautropia mirabilis ATCC
51599]
gi|319741502|gb|EFV93927.1| glucose inhibited division protein B [Lautropia mirabilis ATCC
51599]
Length = 341
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Query: 16 LNTYNVS-RET-LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED-----SLRVFQL 68
L +V+ ET K+ + L +W++ NL+ +S H+ D + L
Sbjct: 26 LQRLSVTLDETAFAKVVQWARLLKQWNRTFNLLGNSDSAHLIDEHLLDSLAIVPVLERYL 85
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
+D+G+G GFPGI+ +I L+E KK +FLR V V
Sbjct: 86 PRPEEALVDVGTGAGFPGILLAIVQPQRPIY---LVEPVGKKVAFLRQSVLTLGLKNATV 142
Query: 128 FACRIQEAPQM 138
A +I++ +
Sbjct: 143 LAGKIEDLESL 153
>gi|297724643|ref|NP_001174685.1| Os06g0239000 [Oryza sativa Japonica Group]
gi|255676877|dbj|BAH93413.1| Os06g0239000 [Oryza sativa Japonica Group]
Length = 110
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++P DV ARA+A+L L EY P +
Sbjct: 3 NVGQSPDFREAFDVAVARAVAELKVLAEYCLPLVR 37
>gi|326392913|ref|ZP_08214119.1| glucose inhibited division protein [Thermoanaerobacter ethanolicus
JW 200]
gi|325991046|gb|EGD49832.1| glucose inhibited division protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 77
Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 124 RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 5 EIELIHGRAEDIGKDIKYREQFDLSVARAVAPLNVLLEYTLPFV 48
>gi|254460472|ref|ZP_05073888.1| methyltransferase GidB [Rhodobacterales bacterium HTCC2083]
gi|206677061|gb|EDZ41548.1| methyltransferase GidB [Rhodobacteraceae bacterium HTCC2083]
Length = 151
Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 75 WIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+DLGSGGGFPG++ +I + L+ES +K +FLR V ++T A+ V A RI+
Sbjct: 12 WVDLGSGGGFPGLVLAIISKELAPQTQFTLVESDQRKCAFLRTVARETGAKITVIAQRIE 71
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D++SARAL+DL LL+Y+ L +
Sbjct: 72 GVDPQ--NADILSARALSDLPMLLQYAKLHLAK 102
>gi|313895121|ref|ZP_07828678.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312976016|gb|EFR41474.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 120
Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ LE+ + L L W++++NL + + ED ++H+ DSL + + +
Sbjct: 20 LTNAQLEQCVRYNELLLTWNERMNLTALTAPEDVAVKHIVDSLSAYDAPLFARAKSLIDV 79
Query: 81 GGG 83
G G
Sbjct: 80 GTG 82
>gi|119952975|ref|YP_945184.1| methyltransferase GidB [Borrelia turicatae 91E135]
gi|254766882|sp|A1QYX2|RSMG_BORT9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119861746|gb|AAX17514.1| methyltransferase GidB [Borrelia turicatae 91E135]
Length = 207
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLR--VFQLHP 70
L + VS ++++KL ++ L + + NLVS++ D + HV DS+
Sbjct: 9 LKSLGVSFTSKSIDKLRFYIEKVLLFGTRFNLVSNNDRNFDAVLLHVLDSVAGLPIIKDK 68
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P +D+GSG GFPGI+ ++ + + L+E NKKA+FLR + +
Sbjct: 69 NPRQVLDVGSGAGFPGIVLALFDNFRK---YILLERSNKKATFLRMISLELGLDNIEVLE 125
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + Q + I+ RA D+ L
Sbjct: 126 RDVDKEQN--KYEFITIRAFRDIREYARILKLILKD 159
>gi|228988711|ref|ZP_04148796.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771023|gb|EEM19504.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 65
Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 28/48 (58%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+
Sbjct: 13 KGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSIT 60
>gi|163785694|ref|ZP_02180220.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
gi|159879038|gb|EDP73016.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
Length = 123
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--- 65
IL+ N +S + LE + + +LKW+ NL S E+ +H DSL +
Sbjct: 8 ILKRLCQENYIKISDKQLELFDKYLSFYLKWNNVYNLSSIRKKEEIVKKHFFDSLTLVKL 67
Query: 66 ---FQLHPYPSIWIDLGSGGGFPGIITSIQL 93
+ D GSG GFPG+ I
Sbjct: 68 FEKTNIELRNKEVADFGSGAGFPGVPLKIYY 98
>gi|313678715|ref|YP_004056455.1| methyltransferase GidB [Mycoplasma bovis PG45]
gi|312950099|gb|ADR24694.1| methyltransferase GidB [Mycoplasma bovis PG45]
Length = 195
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
E+++ + L +D+G+G GFP + I L + + ++ES K+ +FL V
Sbjct: 21 FENAMNEYGLDFVNKKILDIGAGAGFPSVPLLIALDNK--FELVIMESITKRCTFLESVK 78
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + R +E + D I ARA+ + + + L Q
Sbjct: 79 NEFNLNLTIINARAEEINDYNSYFDYICARAVGSVIKIYLMANHHLAQ 126
>gi|23004582|ref|ZP_00047839.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Magnetospirillum
magnetotacticum MS-1]
Length = 143
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E F + L+ V W RH+ +S V P + D+GSG G PG++
Sbjct: 30 EKFAERLRNEGELRGLIGPREVPRIWDRHILNSAAVVPFLPRTGLIADVGSGAGLPGVVI 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+ V LIE ++ ++L + + + +V R +E
Sbjct: 90 AAMRPE---ATVYLIEPMERRCAWLTEIAEDLSLPNIEVKRGRAEEYH 134
>gi|119486502|ref|ZP_01620560.1| Glucose inhibited division protein [Lyngbya sp. PCC 8106]
gi|119456404|gb|EAW37535.1| Glucose inhibited division protein [Lyngbya sp. PCC 8106]
Length = 230
Score = 50.5 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 10/125 (8%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-------QLHPYPSIWID 77
++ + Y L ++ +NL + E FW +H+ DSL ID
Sbjct: 28 QNQQFQCLYEEILTGNQSLNLTRITQPEAFWEKHLWDSLAGIAPLLRGEWDFASTVEVID 87
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFPG+ +I V L++S KK +FL ++ + E
Sbjct: 88 IGTGAGFPGLPVAIAFPK---SSVMLLDSVRKKITFLESLIADLEIKNSSLFVGRAEQVN 144
Query: 138 MITTC 142
Sbjct: 145 QQLKF 149
>gi|203284098|ref|YP_002221838.1| glucose inhibited division protein B [Borrelia duttonii Ly]
gi|226795818|sp|B5RL03|RSMG_BORDL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|201083541|gb|ACH93132.1| glucose inhibited division protein B [Borrelia duttonii Ly]
Length = 210
Score = 50.5 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 9 ILRANYLLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLR- 64
+ + L N + E ++KL ++ L +S + NLVS++ D + H DS+
Sbjct: 2 MTNFKFALKNLKVNFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVSG 61
Query: 65 -VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P +D+GSG GFPGI+ ++ + L+E NKKA FL+ + +
Sbjct: 62 LPIVKDKNPRQVLDVGSGAGFPGIVLALFDRCRK---YVLLERSNKKAIFLKMISLELGL 118
Query: 124 -RGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+V ++E + I+ RA D+
Sbjct: 119 ENVEVLEHNVEEEQN---KYEFITIRAFGDIRKYANI 152
>gi|12045241|ref|NP_073052.1| methyltransferase GidB [Mycoplasma genitalium G37]
gi|255660406|ref|ZP_05405815.1| methyltransferase GidB [Mycoplasma genitalium G37]
gi|1346132|sp|P47620|RSMG_MYCGE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|3844968|gb|AAC71607.1| methyltransferase GidB [Mycoplasma genitalium G37]
gi|166078794|gb|ABY79412.1| methyltransferase GidB [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 192
Score = 50.5 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVFQLHPYPSIWIDLGSGGGFP 85
E + L + +K NL T E + V + + ++ DLGSG G P
Sbjct: 6 FEKYVDLVFEANKNFNLTGFKTKEAIYQNLVIEILTLFKGYEKFFIDKTVADLGSGNGSP 65
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDV 144
GII + + + LI+SK+KK SFL + ++ V RI+ DV
Sbjct: 66 GIILKLLF--QKIKKLVLIDSKHKKISFLNKLTKQLNLEKTVAICERIEVHKNH---YDV 120
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
I +R L+ + + + +F L K
Sbjct: 121 ICSRGLSTIIKVNDLAFSLLNSK 143
>gi|203287636|ref|YP_002222651.1| glucose inhibited division protein B [Borrelia recurrentis A1]
gi|226795819|sp|B5RQZ6|RSMG_BORRA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|201084856|gb|ACH94430.1| glucose inhibited division protein B [Borrelia recurrentis A1]
Length = 210
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Query: 9 ILRANYLLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLR- 64
+ + L N + E ++KL ++ L +S + NLVS++ D + H DS+
Sbjct: 2 MTNFKFALKNLKVNFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVSG 61
Query: 65 -VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+D+GSG GFPGI+ ++ + L+E NKKA FL+ + +
Sbjct: 62 LPIVKDKNLRQVLDVGSGAGFPGIVLALFDRCRK---YVLLERSNKKAIFLKMISLELGL 118
Query: 124 -RGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+V ++E + I+ RA D+
Sbjct: 119 ENVEVLEHNVEEEQN---KYEFITIRAFGDIRKYANI 152
>gi|313895196|ref|ZP_07828753.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312976091|gb|EFR41549.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 38
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
D+ +RA+A L L EY+ P++
Sbjct: 2 HTYRAQYDIAVSRAVARLPVLAEYALPFVR 31
>gi|260576111|ref|ZP_05844104.1| glucose inhibited division protein [Rhodobacter sp. SW2]
gi|259021591|gb|EEW24894.1| glucose inhibited division protein [Rhodobacter sp. SW2]
Length = 128
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
LIE+ +KA+FLR Q+ + +V A RI+ P DV+SARALA LD LL Y
Sbjct: 15 RFTLIEADQRKATFLRQAAQELNLKVQVLAQRIESTPPQ--AADVVSARALAPLDQLLSY 72
Query: 160 SF 161
+
Sbjct: 73 AA 74
>gi|312601598|gb|ADQ90853.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma
hyopneumoniae 168]
Length = 149
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G+G GFP I I IE + + ES K+ FL+ V +K + + +QE
Sbjct: 19 LDIGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDVSEKLDLKFNLICKPVQEI 75
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
D+I+ARA+A+L+ L + +
Sbjct: 76 NPQ--KFDIITARAVANLEKLEKIT 98
>gi|251772737|gb|EES53299.1| glucose inhibited division protein [Leptospirillum
ferrodiazotrophum]
Length = 200
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIWI 76
++ + + L+ + L L+W+ I L + E + + + F P I
Sbjct: 12 LTPKQMSALDRYTSLLLEWNTHIRLTGYHSQEQVREHLLLEPILAFHYLQGRLPNSLPRI 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D GSG G PG++ ++ L+E KK FL V + +
Sbjct: 72 DFGSGNGSPGLVMALLDPD---HSYLLVERVQKKRIFLENVSRHLSLSNVTV 120
>gi|213621534|ref|ZP_03374317.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 56
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
++ L + + KW+K NL S + +RH+ DS
Sbjct: 2 LTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDS 43
>gi|294786225|ref|ZP_06751479.1| 16S rRNA methyltransferase GidB [Parascardovia denticolens F0305]
gi|315225758|ref|ZP_07867546.1| glucose inhibited division protein B [Parascardovia denticolens DSM
10105]
gi|294485058|gb|EFG32692.1| 16S rRNA methyltransferase GidB [Parascardovia denticolens F0305]
gi|315119890|gb|EFT83022.1| glucose inhibited division protein B [Parascardovia denticolens DSM
10105]
Length = 327
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 22/133 (16%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----------------- 70
KL F+ K + L+ V+ W RH+ +S +
Sbjct: 21 KLTRFHAKLEKEGEPRGLIGPRDVDIIWERHILNSAALLPFVRTALDAIPSRLYLGEVDG 80
Query: 71 -YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
I D+GSGGGFPGI+ + L + LIE ++ +L+ VV++ +
Sbjct: 81 ENAPIVGDIGSGGGFPGIVLAALLPHVRFF---LIEPMERRCEWLQEVVEELDLNNATIV 137
Query: 129 ACRIQEAPQMITT 141
R +E ++
Sbjct: 138 RARTEELEAILKR 150
Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
QE + ++++ RA+A + L + P L
Sbjct: 238 ELFQEENPYFSGFNIVTCRAVAPMTKLARMTLPLL 272
>gi|242556525|pdb|3G88|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group P61
gi|242556526|pdb|3G88|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group P61
gi|242556528|pdb|3G89|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet And Amp In Space Group P61
gi|242556529|pdb|3G89|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet And Amp In Space Group P61
gi|242556532|pdb|3G8A|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556533|pdb|3G8A|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556534|pdb|3G8A|C Chain C, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556535|pdb|3G8A|D Chain D, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556536|pdb|3G8A|E Chain E, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556537|pdb|3G8A|F Chain F, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556539|pdb|3G8B|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group I222
gi|242556540|pdb|3G8B|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group I222
Length = 249
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLGSGGG 83
LE Y L + S K+NL + E+ ++H DSL L P +DLG+G G
Sbjct: 33 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAG 92
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
FPG+ I +E + L+++ KK +F+ ++ +G
Sbjct: 93 FPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKG 131
>gi|7657948|emb|CAB89206.1| putative glucose inhibited division protein B [Thermus
thermophilus]
Length = 225
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLGSGGG 83
LE Y L + S K+NL + E+ ++H DSL L P +DLG+G G
Sbjct: 9 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAG 68
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
FPG+ I +E + L+++ KK +F+ ++ +G
Sbjct: 69 FPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKG 107
>gi|55981940|ref|YP_145237.1| 16S rRNA methyltransferase GidB [Thermus thermophilus HB8]
gi|62298017|sp|Q9LCY2|RSMG_THET8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|55773353|dbj|BAD71794.1| glucose inhibited division protein B [Thermus thermophilus HB8]
Length = 249
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLGSGGG 83
LE Y L + S K+NL + E+ ++H DSL L P +DLG+G G
Sbjct: 33 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAG 92
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
FPG+ I +E + L+++ KK +F+ ++ +G
Sbjct: 93 FPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKG 131
>gi|253800969|ref|YP_003033971.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
KZN 1435]
gi|289556187|ref|ZP_06445397.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis KZN 605]
gi|297733601|ref|ZP_06962719.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
KZN R506]
gi|313660932|ref|ZP_07817812.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
KZN V2475]
gi|253322473|gb|ACT27076.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
KZN 1435]
gi|289440819|gb|EFD23312.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis KZN 605]
Length = 137
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 109 KKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ FLR +V ++ R +E + D +RA+A LD L ++S P +
Sbjct: 9 RRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSMPLIRP 68
>gi|323167067|gb|EFZ52797.1| methyltransferase gidB domain protein [Shigella sonnei 53G]
Length = 89
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+K NL S + +RH+ DS+ V + +ID+G+G G PGI SI
Sbjct: 1 NKAYNLTSVRDPNEMLVRHILDSI-VVAPYLQGERFIDVGTGPGLPGIPLSIVRPE---A 56
Query: 100 LVNLIESKNKKASFLRYVVQKTAARG 125
L++S K+ FLR V R
Sbjct: 57 HFTLLDSLGKRVRFLRQVHMSLNWRI 82
>gi|207110004|ref|ZP_03244166.1| glucose-inhibited division protein B [Helicobacter pylori
HPKX_438_CA4C1]
Length = 137
Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+E + K+A+FL Y+ + E Q + D+I++RA+A L+E S +
Sbjct: 66 LEPRIKRAAFLNYLKSVLPLNNIEIVKKRLEDYQNLLQVDLITSRAVASSSFLIERSQRF 125
Query: 164 LYQK 167
L K
Sbjct: 126 LKDK 129
>gi|309808194|ref|ZP_07702104.1| ribosomal RNA small subunit methyltransferase G domain protein
[Lactobacillus iners LactinV 01V1-a]
gi|308168575|gb|EFO70683.1| ribosomal RNA small subunit methyltransferase G domain protein
[Lactobacillus iners LactinV 01V1-a]
Length = 56
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
NS + LL +S E+ +Y + ++K NL + ++ +++H
Sbjct: 1 MNSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFL 56
>gi|307128691|ref|YP_003880721.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
CARI]
gi|306483153|gb|ADM90023.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
CARI]
Length = 208
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPG 86
Y L ++ KIN++S ++++ F+ H SL ++++ + + +D+G+GGGFPG
Sbjct: 23 FFKLYKLHKFFNLKINIISKNSLKLFYESHFLHSLSIYKIFYFFNKSIILDVGTGGGFPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I +I + + LI+S KK + +++ K + C C+ +
Sbjct: 83 IPLAIMFNKTK---FILIDSIKKKIKLINFIINKLHLKNVYIQCT--RIENFNKKCNFLL 137
Query: 147 ARALADLDTLLEY 159
RA+ L+
Sbjct: 138 GRAVTKFTNFLKL 150
>gi|224531849|ref|ZP_03672481.1| methyltransferase GidB [Borrelia valaisiana VS116]
gi|224511314|gb|EEF81720.1| methyltransferase GidB [Borrelia valaisiana VS116]
Length = 208
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 11/165 (6%)
Query: 9 ILRANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDSLR 64
I + L+ YN + L+K+ + L + + NL+S+S HV DSL
Sbjct: 2 ISDIEFALSEYNFQFVYKDLQKINLYIKRILLLNTRFNLISNSNSNFNAILNLHVIDSLL 61
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
PS +D+GSG GFPGI+ +I +S + L+E KK++FL+ + +
Sbjct: 62 GLSTIKEINPSEVLDVGSGAGFPGIVLAIFDTSRKYY---LLERSKKKSTFLKMIKLELD 118
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + I+ RA ++ L K
Sbjct: 119 LENVKILEYEIEREKKKHEF--ITIRAFRSMNEYALILKNLLKDK 161
>gi|20807574|ref|NP_622745.1| glucose-inhibited division protein [Thermoanaerobacter
tengcongensis MB4]
gi|20516111|gb|AAM24349.1| glucose-inhibited division protein [Thermoanaerobacter
tengcongensis MB4]
Length = 86
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLGSGGGFPGIITS 90
+ LKW++K+NL +S+ E I+H DSL + ID G+G GFPGI
Sbjct: 6 VEMLLKWNQKMNLAASTEEEKVVIKHFLDSLSLVRYNKIKRQEKVIDTGTGAGFPGIPLK 65
Query: 91 IQLSSIE 97
I I
Sbjct: 66 IVFPEIR 72
>gi|24217047|ref|NP_714528.1| glucose-inhibited division protein B [Leptospira interrogans
serovar Lai str. 56601]
gi|45659303|ref|YP_003389.1| glucose inhibited division protein B [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|81567802|sp|Q72LR3|RSMG_LEPIC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81589507|sp|Q8EY69|RSMG_LEPIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24198458|gb|AAN51546.1| glucose-inhibited division protein B [Leptospira interrogans
serovar Lai str. 56601]
gi|45602549|gb|AAS72026.1| glucose inhibited division protein B [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 254
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------DLG 79
+ + F + ++ S E+ RHV +S+ D G
Sbjct: 33 WDLVHKFTVFLKEKNEAGGFFSKRDSEEILDRHVLESIYHVYRITKKIGSWKGTQLGDAG 92
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G G PG E +V LI+S+ +K S V+ G F E ++
Sbjct: 93 TGPGIPGFFFRC---LKEHPIVVLIDSQKRKLSHTENFVRSNQIDGVKFQFIRAEESKLS 149
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
+++R +E L
Sbjct: 150 LNY--VTSRGFIPYPYSIEAICNLLK 173
>gi|318042306|ref|ZP_07974262.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CB0101]
Length = 249
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 13/116 (11%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSGGGFPGIITSIQL 93
W+ ++NL +DFWI V DSL Q ID+G+GGGFPG+ ++
Sbjct: 36 WNGRVNLTRLVEGDDFWIAQVFDSLWPLQQRLQEQAEAPLRCIDVGTGGGFPGLAIAVAF 95
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQ---EAPQMITTCDV 144
+ + L++S +K + + +V R++ Q D+
Sbjct: 96 PQAQ---LTLVDSVGRKTQAVEAMAAALGLSDRVQLRCERVELTGRHGQCRGQFDL 148
>gi|330813394|ref|YP_004357633.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486489|gb|AEA80894.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Candidatus Pelagibacter sp. IMCC9063]
Length = 161
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 55 WIRHVEDSLRV-FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE-GGLVNLIESKNKKAS 112
RH+EDS ++ ++ + +D+GSG GFPGI+ I + + ++++E +KK +
Sbjct: 1 MSRHIEDSAQLLKYINIEDNNILDIGSGAGFPGIVMYIIKNDLNINFKLDIVEKSSKKCT 60
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+L+ + + + + + + +RA LD+ L
Sbjct: 61 YLQELCKFLEIDVAIHNHDVNNLKKK--DYTTLVSRAFKPLDSFLNI 105
>gi|323447141|gb|EGB03087.1| hypothetical protein AURANDRAFT_15293 [Aureococcus anophagefferens]
Length = 159
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 11/136 (8%)
Query: 38 KWSKKINLVSSSTVE--DFWIRHVEDSLRVFQLHPY-----PSIWIDLGSGGGFPGIITS 90
W+ K+N+VS ++ H SL + + + S +D+G+GGGFPG+ +
Sbjct: 1 DWNAKVNVVSRKDLDRRKLVELHYLPSLALLNVPGFAGLAPASRVVDVGTGGGFPGLPLA 60
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
I ++ L + K V A R + + D++ R++
Sbjct: 61 ICRPELDFTLCDSRRKKVDVVKSCADVAN--CDNVAPVAGRAPQ--DIAGDHDLVLGRSV 116
Query: 151 ADLDTLLEYSFPWLYQ 166
+L P L
Sbjct: 117 KNLPDFFRTVAPALSP 132
>gi|256372783|ref|YP_003110607.1| glucose inhibited division protein [Acidimicrobium ferrooxidans DSM
10331]
gi|256009367|gb|ACU54934.1| glucose inhibited division protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 218
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
W+DLGSGGG PG+I +++L + E L++++ ++A+FL V+ +V A
Sbjct: 42 RWVDLGSGGGIPGLIVALELPASE---GLLVDARQRRAAFLTEAVRALNWSARVRIAAER 98
Query: 133 QEA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
E ++ D + AR E ++
Sbjct: 99 GEVLARSKEIRERADAVVARGFGAPPVTAEIGSGFVR 135
>gi|256370766|ref|YP_003108591.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
SMDSEM]
gi|256009558|gb|ACU52918.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
SMDSEM]
Length = 232
Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 62/156 (39%), Gaps = 7/156 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + N + + K+ Y ++ + K IN+ S + F+ +H +L +
Sbjct: 1 MKFNKKIKLINNYFPEIDKLKLKIYILYKIYNFYYKNINIFSKKSFNGFFEKHCIHTLSI 60
Query: 66 FQLHPYPSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ + I D+G+GGGFPGI +I + + L++ I+ K K ++ +
Sbjct: 61 SKIMKFLKKSIVLDVGTGGGFPGIPLAIMFNETKFILIDSIKKKIKIIQI---IIDELHL 117
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
C+ I RA+ L ++
Sbjct: 118 NN--VQIVCTRIENFEKKCNFILGRAVTQLSNFIKL 151
>gi|51535158|dbj|BAD37870.1| methyltransferase-related-like [Oryza sativa Japonica Group]
gi|51535822|dbj|BAD37907.1| methyltransferase-related-like [Oryza sativa Japonica Group]
Length = 111
Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Query: 43 INLVSSSTVEDFWIRHVEDS-------LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
+NL + + + RHV DS R ++ +D+GSG G PG+I ++ S
Sbjct: 1 MNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDLGGMRLVDVGSGAGLPGLILAVARPS 60
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+ L+ES K+ FL + V+ V R ++
Sbjct: 61 WK---FTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRAED 97
>gi|289810299|ref|ZP_06540928.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 82
Score = 42.4 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 135 APQMITTCDVISARALADLDTLLEYSFPW 163
A D + +RA A L+ ++ +
Sbjct: 1 AYPSEPPFDGVISRAFASLNDMVSWCHHL 29
>gi|116329511|ref|YP_799231.1| glucose-inhibited division protein B [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116329826|ref|YP_799544.1| glucose inhibited division protein B [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|122282399|sp|Q04WD4|RSMG_LEPBJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122282710|sp|Q04X97|RSMG_LEPBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116122255|gb|ABJ80298.1| Glucose-inhibited division protein B [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116123515|gb|ABJ74786.1| Glucose inhibited division protein B [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 254
Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------DLG 79
LE + F + ++ S + RHV +S+ D G
Sbjct: 33 LELICKFTLFLKEKNEVGGFFSKRDSMEILDRHVLESIYHVYRITKKIGSWKGIQLGDAG 92
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G G PG +V LI+S+ +K S V+ F E ++
Sbjct: 93 TGPGIPGFFFRC---LKAYPVVVLIDSQKRKLSHTESFVRSNRITDLKFQFIRTEESKLS 149
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
+ +R +E +
Sbjct: 150 LNY--VVSRGFIPYPYSVEAVSNLIK 173
>gi|207093508|ref|ZP_03241295.1| glucose-inhibited division protein B [Helicobacter pylori
HPKX_438_AG0C1]
Length = 77
Score = 40.8 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
+ L+W++ NL + + + + D+L+ + +D+GSG G P I +++
Sbjct: 2 ILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIPLALEKP 60
Query: 95 SIEG 98
++
Sbjct: 61 EVKF 64
>gi|149174307|ref|ZP_01852934.1| UbiE/COQ5 methyltransferase [Planctomyces maris DSM 8797]
gi|148846852|gb|EDL61188.1| UbiE/COQ5 methyltransferase [Planctomyces maris DSM 8797]
Length = 256
Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 5/91 (5%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D LR P +D+G+G G ++ + G + ++ S R +
Sbjct: 43 LDVLRKTVPGEIPCKILDMGTGPGTIALLWAEL-----GHAITGVDFSATMISAGREAAK 97
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ ++ P T D+IS+RA+
Sbjct: 98 ERGLTVDFVEADVEAPPFPENTFDIISSRAV 128
>gi|255527470|ref|ZP_05394341.1| molybdate metabolism regulator [Clostridium carboxidivorans P7]
gi|255508850|gb|EET85219.1| molybdate metabolism regulator [Clostridium carboxidivorans P7]
Length = 1186
Score = 40.8 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 11/152 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINL------VSSSTVEDF 54
MK N I+ L NVS ++KLE + + ++ +N+ S S
Sbjct: 3 MKEHLLNRIMD---ALEELNVSENVIDKLEDYLEDAVDENEFLNILPDIKFYSISDDNIK 59
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
H S++ ++ + Y +I++ G P + + + A
Sbjct: 60 KTVHALSSIKKYKNNDYMRKYINMLFKMGGPSASLIVNRAY--YWFSEYNAKEFIAAGIE 117
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+Y+V + E+ D+ S
Sbjct: 118 KYIVLVLYIEPLTYNFNKLESKYFKIIYDICS 149
>gi|302337888|ref|YP_003803094.1| methyltransferase type 11 [Spirochaeta smaragdinae DSM 11293]
gi|301635073|gb|ADK80500.1| Methyltransferase type 11 [Spirochaeta smaragdinae DSM 11293]
Length = 249
Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 37/117 (31%), Gaps = 15/117 (12%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
S E+ +++ + P + +D+G+G GF ++ + +G + ++
Sbjct: 25 SRKEEEEI---QAYEAVLGRYIPPDRAEILDVGAGTGFLSLLLA-----QKGHSITALDL 76
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + P + D + +R L ++ P
Sbjct: 77 TREMLDKAWEKAASLNLNLNFVIGDAENLPFESESFDFVVSR-------WLLWTLPH 126
>gi|297625196|ref|YP_003706630.1| glucose inhibited division protein [Truepera radiovictrix DSM
17093]
gi|297166376|gb|ADI16087.1| glucose inhibited division protein [Truepera radiovictrix DSM
17093]
Length = 212
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 8/150 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDF---WIRHVEDSLRVFQLHPYPSIW 75
++V + +L + L ++S ++L+S +E+F + + +
Sbjct: 2 FHVKHDLAAQLAGYAALVRRYSGALDLMSPRAIENFEDKVAESLVYADLIEPHLSPAERL 61
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+DLGSG G PGI +++ + L+E + K+A FL VV +V A +
Sbjct: 62 LDLGSGVGLPGIPLALRFPDAP---LILVERRRKRARFLELVVAHLQLANVRVMATDARA 118
Query: 135 A-PQMITTCDVISARALADLDTLLEYSFPW 163
P + ++A+A+ L +
Sbjct: 119 LSPDDVGRVAWVTAQAVGSFPLLYTTTAHL 148
>gi|134293400|ref|YP_001117136.1| methyltransferase type 11 [Burkholderia vietnamiensis G4]
gi|134136557|gb|ABO57671.1| Methyltransferase type 11 [Burkholderia vietnamiensis G4]
Length = 283
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 22/74 (29%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
L G G + +I + ++ + + R ++ + Q
Sbjct: 51 HGVLDVGCGTGAVTLAIARRLAKDAQCTGVDISARMIAAARERAERDGVAAEFVHADAQT 110
Query: 135 APQMITTCDVISAR 148
P D+I +R
Sbjct: 111 HPFARERFDLIVSR 124
>gi|188590813|ref|YP_001795413.1| hypothetical protein RALTA_A0018 [Cupriavidus taiwanensis LMG
19424]
gi|170937707|emb|CAP62691.1| conserved hypothetical protein; putative methyltransferase
[Cupriavidus taiwanensis LMG 19424]
Length = 297
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 11/101 (10%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ Q + L G G ++ G ++ + R Q+
Sbjct: 43 QLVQAARNAAAQRILDVGCGTGSTTLALARHIGAQGHCTGVDISGPMLAVARTRAQREGI 102
Query: 124 RGKVFACRIQEAPQMITTCDVISA-----------RALADL 153
QE + D+I + RA A+L
Sbjct: 103 NASFIHADAQEHAFAAASFDMIVSRLGVMFFSDPVRAFANL 143
>gi|87301282|ref|ZP_01084123.1| putative glucose inhibited division protein B [Synechococcus sp. WH
5701]
gi|87284250|gb|EAQ76203.1| putative glucose inhibited division protein B [Synechococcus sp. WH
5701]
Length = 244
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWIDLGSGGGFPGIITSIQ 92
W+ ++NL +D+WI V DSL ++ +D+G+GGGFPG+ +I
Sbjct: 36 RHWNARLNLTRLVDGDDYWIAQVYDSLWPWRDQLNTPSQPLRCLDVGTGGGFPGLALAI- 94
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMI 139
++ + L++S +KA ++ + R +V R + Q
Sbjct: 95 --ALPAARLTLVDSVGRKAEAVKAMAASLGLGERVQVRWERAEATGQAR 141
>gi|108805990|ref|YP_645927.1| methyltransferase GidB [Rubrobacter xylanophilus DSM 9941]
gi|123365716|sp|Q1AR63|RSMG_RUBXD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|108767233|gb|ABG06115.1| methyltransferase GidB [Rubrobacter xylanophilus DSM 9941]
Length = 261
Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLG 79
SRE L LE + L + ++ N++ + E + HV DS F+ D+G
Sbjct: 36 SREQLSLLEEYALLLAGY-RRANVIGTREPETVLLEHVLDSASCLLFEPLRAAGRVADVG 94
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EA 135
SGGG PGI I L V LIES KKA FLRY ++ G V R++
Sbjct: 95 SGGGLPGIPLKILLPEAR---VVLIESTGKKADFLRYAIESLGLSGVDVVNARVEAVARE 151
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ARA+A L L EY P L
Sbjct: 152 AAHRSRYDAALARAVAALPVLAEYCVPLLR 181
>gi|296186061|ref|ZP_06854466.1| hypothetical protein CLCAR_1503 [Clostridium carboxidivorans P7]
gi|296049329|gb|EFG88758.1| hypothetical protein CLCAR_1503 [Clostridium carboxidivorans P7]
Length = 359
Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 11/152 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINL------VSSSTVEDF 54
MK N I+ L NVS ++KLE + + ++ +N+ S S
Sbjct: 3 MKEHLLNRIMD---ALEELNVSENVIDKLEDYLEDAVDENEFLNILPDIKFYSISDDNIK 59
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
H S++ ++ + Y +I++ G P + + + A
Sbjct: 60 KTVHALSSIKKYKNNDYMRKYINMLFKMGGPSASLIVNRAY--YWFSEYNAKEFIAAGIE 117
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+Y+V + E+ D+ S
Sbjct: 118 KYIVLVLYIEPLTYNFNKLESKYFKIIYDICS 149
>gi|224534193|ref|ZP_03674771.1| methyltransferase GidB [Borrelia spielmanii A14S]
gi|224514295|gb|EEF84611.1| methyltransferase GidB [Borrelia spielmanii A14S]
Length = 208
Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR--HVEDSLR--VFQLHPYPS 73
+ + + L+K+ + L + + NL+S++ I HV DSL PS
Sbjct: 13 NFQFTYKDLQKINLYIKRILLLNTRFNLISNNNSNFNSILNLHVIDSLLGLPTIKEINPS 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+GSG GFPGII +I +S + L+E KK++FL+ + +
Sbjct: 73 EILDVGSGAGFPGIILAIFDTSRKYY---LLERSKKKSTFLKMIKLELDLENVKILEY-- 127
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + + I+ RA ++ L +
Sbjct: 128 EIERERKAYEFITIRAFRSMNEYAIVLRNLLKNR 161
>gi|56460032|ref|YP_155313.1| hypothetical protein IL0924 [Idiomarina loihiensis L2TR]
gi|56179042|gb|AAV81764.1| Protoporphyrinogen oxidase [Idiomarina loihiensis L2TR]
Length = 281
Score = 37.7 bits (86), Expect = 0.49, Method: Composition-based stats.
Identities = 15/139 (10%), Positives = 37/139 (26%), Gaps = 20/139 (14%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-------- 76
T E+ ++ L K + + +FW + + + + +
Sbjct: 48 TQEQQRHYEECILARQKGKPVAHITGRREFWS-LMLEVNASTLIPRPDTETLVEAALSLE 106
Query: 77 --------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
DLG+G G + + + + R Q ++
Sbjct: 107 LPENARVLDLGTGTGAVALALKSERPGWQVWAC---DKSGDAVELARRNSQALGLNVEIL 163
Query: 129 ACRIQEAPQMITTCDVISA 147
++ D+I +
Sbjct: 164 CSNWFQSVPKSLKFDLILS 182
>gi|20092700|ref|NP_618775.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
gi|19917988|gb|AAM07255.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
Length = 251
Score = 37.7 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 12/128 (9%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
+E + + S +S E+ W + +D+GSG
Sbjct: 5 KEIIRDFWNYRSQTFDKSPGH-YTASKEEEEAWKGLL------RSKLDDAEKILDIGSGT 57
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
GF ++ + G V I+ + + ++ ++ +
Sbjct: 58 GFLSLMLADM-----GYEVVGIDLSEEMIARASAKAKERGLSIDFHQDDAEQLGFENNSF 112
Query: 143 DVISARAL 150
D I RA+
Sbjct: 113 DAIVNRAV 120
>gi|157412525|ref|YP_001483391.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. MIT 9215]
gi|254526041|ref|ZP_05138093.1| magnesium protoporphyrin O-methyltransferase [Prochlorococcus
marinus str. MIT 9202]
gi|157387100|gb|ABV49805.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. MIT 9215]
gi|221537465|gb|EEE39918.1| magnesium protoporphyrin O-methyltransferase [Prochlorococcus
marinus str. MIT 9202]
Length = 233
Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 18/135 (13%)
Query: 36 FLKWSKKINLVSSSTV-----EDFWIRH---VEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
F +W+K + S S ++ H V+D + + +P + +G G +
Sbjct: 21 FERWNK---IYSKSDEINTVQKNIRKGHQKTVDDVVSYIKNYPELTKKSYCDAGCGVGSL 77
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ I+ V+ I S+ + + + + + + ++ DV+
Sbjct: 78 SIPLLRLGIKKLQVSDISSE--MIKETKKRINELGLNQGIIKYEVCDLEKLKGLFDVVVC 135
Query: 148 RALADLDTLLEYSFP 162
LD + Y P
Sbjct: 136 -----LDVFIHYPQP 145
>gi|149924590|ref|ZP_01912946.1| methyltransferase GidB [Plesiocystis pacifica SIR-1]
gi|149814556|gb|EDM74140.1| methyltransferase GidB [Plesiocystis pacifica SIR-1]
Length = 237
Score = 37.4 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Query: 17 NTYNVSRET--LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPY 71
+ E L+K+ + + NL S D HV + L++ +
Sbjct: 38 EDLGLPEEAVDLDKVLILKDFLKFYGRAANLTGSLADADL-DAHVIEGLQLVALARQLGV 96
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFAC 130
W+D+GSGGGFPG++ +I L + L+E + K+A L ++K A +V
Sbjct: 97 QGRWLDIGSGGGFPGLVLAIGL----DLQLTLVEPREKRADLLTLGLRKLGRADCEVLRG 152
Query: 131 RIQ-------EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI E + D SARA+ + + + PWL
Sbjct: 153 RIDGGQWRGIEGGPLEPGFDACSARAVFEPERWVREGGPWLRP 195
>gi|298372803|ref|ZP_06982793.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroidetes oral taxon 274 str. F0058]
gi|298275707|gb|EFI17258.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroidetes oral taxon 274 str. F0058]
Length = 283
Score = 37.4 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 45/155 (29%), Gaps = 12/155 (7%)
Query: 2 KYCDSNSILRANYLLNTYNVSRET-------LEKLEYF--YFLFLKWSKKINLVSSSTVE 52
K C N+ + + +S E LE+L+ + + ++ L +
Sbjct: 33 KICGLNT--TKRLISDKIYLSDEQNGRIDDALERLKRYEPIQYIIGYTDFYGLTLRTDRR 90
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
R + L + L + + G I ++ V+ ++ ++
Sbjct: 91 ALIPRPETEELVDWILQECSTAKNVIDICTGSGCIAV-CLAKYLKEAKVSALDISSEAIG 149
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
R + I + D+I A
Sbjct: 150 LARENALNQRLDIVFYQKDIMATDSLWQKFDLIVA 184
>gi|294101476|ref|YP_003553334.1| Methyltransferase type 11 [Aminobacterium colombiense DSM 12261]
gi|293616456|gb|ADE56610.1| Methyltransferase type 11 [Aminobacterium colombiense DSM 12261]
Length = 232
Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 12/103 (11%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D +D+G+G GF + + +G V I+ + +F R + +
Sbjct: 36 HDIFLAPFKDKKSLRLLDMGAGTGFLSLGFA-----KKGHRVTGIDLSPEMVNFARKMAR 90
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + F QE P + D I+ R LL ++ P
Sbjct: 91 EKNISIEFFLGDAQEPPLFSSPFDGITCR------NLL-WTLP 126
>gi|123965432|ref|YP_001010513.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. MIT 9515]
gi|123199798|gb|ABM71406.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. MIT 9515]
Length = 232
Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 54/157 (34%), Gaps = 14/157 (8%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
SN L N + +N + + + ++ K S++IN + + V+D +
Sbjct: 3 SNKNLEKNEVKEYFNGT-----GFDRWRKIYSK-SEEIN-TVQKNIRKGHQKTVDDVISY 55
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +P +G G + + I+ V+ I S+ + + +
Sbjct: 56 VKNYPDLKSKTFCDAGCGVGSLAIPLLRLGIKDLQVSDISSE--MIKETKSRINELGLSQ 113
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + ++ DV+ LD + Y P
Sbjct: 114 RKIKFLTSDLEKLKGLFDVVIC-----LDVFIHYPQP 145
>gi|171058326|ref|YP_001790675.1| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/
5,10-methylene-tetrahydrofolate cyclohydrolase
[Leptothrix cholodnii SP-6]
gi|170775771|gb|ACB33910.1| Methenyltetrahydrofolate cyclohydrolase [Leptothrix cholodnii SP-6]
Length = 287
Score = 37.4 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 6/119 (5%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ + S ++D HV + + G ++ SI + + G +I
Sbjct: 110 IEAISPLKDVDGFHVASAGALMVGETGFKACTPY----GCMKMLESIGMKDLRGKHAVVI 165
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL-LEYSFP 162
N + ++ A V + DV+ A A+ + L E P
Sbjct: 166 GRSNIVGKPMAMMLLAANATVTVCHSGTADLGHHTRQADVVVA-AVGKRNVLTAEMVKP 223
>gi|126695526|ref|YP_001090412.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. MIT 9301]
gi|126542569|gb|ABO16811.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. MIT 9301]
Length = 232
Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 30/165 (18%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTV-----EDFWIRH-- 58
SN I+ + + +N F +W+K + S S ++ H
Sbjct: 3 SNKIIEKSEVREYFN------------GTGFERWNK---IYSKSDEINTVQKNIRKGHQK 47
Query: 59 -VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
V+D + + +P + +G G + + I+ V+ I S+ +
Sbjct: 48 TVDDVVSYIKNYPELTKKSYCDAGCGVGSLSIPLLRLGIKELQVSDISSE--MIKETKKR 105
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + + + ++ DV+ LD + Y P
Sbjct: 106 INELGLNQGKIKYEVCDLEKLKGLFDVVVC-----LDVFIHYPQP 145
>gi|149907579|ref|ZP_01896326.1| peptide release factor-glutamine N5-methyltransferase [Moritella
sp. PE36]
gi|149809249|gb|EDM69178.1| peptide release factor-glutamine N5-methyltransferase [Moritella
sp. PE36]
Length = 279
Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +DLG+G G + + + V IE + A+ R V++
Sbjct: 106 CMPTHACQVLDLGTGTGAIALALASESPQ---ATVTAIEYQQGAAALARRNVKRCGFDVT 162
Query: 127 VFACRIQEAPQMITTCDVISA 147
V E + DVI +
Sbjct: 163 VLQGSWFEPLKASQRFDVIVS 183
>gi|111114999|ref|YP_709617.1| glucose inhibited division protein B [Borrelia afzelii PKo]
gi|123047052|sp|Q0SNY7|RSMG_BORAP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110890273|gb|ABH01441.1| glucose inhibited division protein B [Borrelia afzelii PKo]
Length = 208
Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR--HVEDSLR--VFQLHPYPS 73
+ + + L+K+ + L + + NL+S+S I HV DSL PS
Sbjct: 13 NFQFAYKDLQKINLYIKRILLLNTRFNLISNSNSNFNSILNLHVIDSLLGLPTIKEANPS 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+GSG GFPGII +I SS + L+E KK++FL+ + +
Sbjct: 73 EILDVGSGAGFPGIILAIFDSSRKYY---LLERSKKKSTFLKMIKLELDLENVKILEY-- 127
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + + I+ RA ++ L +
Sbjct: 128 EIEREKKKYEFITIRAFRSMNEYALVLKNLLKNE 161
>gi|85711947|ref|ZP_01043001.1| HemK [Idiomarina baltica OS145]
gi|85694133|gb|EAQ32077.1| HemK [Idiomarina baltica OS145]
Length = 282
Score = 37.0 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLG+G G + + + V ++ S + ++ +V ++
Sbjct: 119 LDLGTGTGAIALALKSERPDWQ---VTAVDWSASAVSLAQRNARRLGLAVEVLHSHWFDS 175
Query: 136 PQMITTCDVISA 147
+ D+I +
Sbjct: 176 LADRSVYDLIVS 187
>gi|291522780|emb|CBK81073.1| Methylase involved in ubiquinone/menaquinone biosynthesis
[Coprococcus catus GD/7]
Length = 247
Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 16/130 (12%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-----VFQLHPYPSIWIDL 78
E LE + + W+ + + S S +E+ E + + +DL
Sbjct: 2 EQLETIRSY------WNTRADGYSKSVMEEMEDAQKEGTYWKILLDTYLPKGDNPKVLDL 55
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G G GF ++ +G + + +K + + V + Q P
Sbjct: 56 GCGPGFFTMLLG-----QKGCQMTAFDYSDKMLAQAKQNVASVGVTAEFVQGDAQNLPFE 110
Query: 139 ITTCDVISAR 148
T D+I R
Sbjct: 111 DETFDMIVTR 120
>gi|115374110|ref|ZP_01461398.1| methyltransferase GidB [Stigmatella aurantiaca DW4/3-1]
gi|115368886|gb|EAU67833.1| methyltransferase GidB [Stigmatella aurantiaca DW4/3-1]
Length = 149
Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA---RGKVFACRI 132
+DLG+G GFPG+ + ++ V L+++ KK FL+ + RG
Sbjct: 8 LDLGAGAGFPGLPLKLARPAL---AVTLVDAVGKKVGFLKAAIAALGLKEARGLHLRAEG 64
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ I +++ ARA DL L + ++
Sbjct: 65 DPEREGIPRAELLIARAFMDLPDWLALAPAYVRP 98
>gi|216263790|ref|ZP_03435784.1| 16S rRNA methyltransferase GidB [Borrelia afzelii ACA-1]
gi|215979834|gb|EEC20656.1| 16S rRNA methyltransferase GidB [Borrelia afzelii ACA-1]
Length = 208
Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR--HVEDSLR--VFQLHPYPS 73
+ + + L+K+ + L + + NL+S+S I HV DSL PS
Sbjct: 13 NFQFAYKDLQKINLYIKRILLLNTRFNLISNSNSNFNSILNLHVIDSLLGLPTIKEANPS 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+GSG GFPGII +I SS + L+E KK++FL+ + +
Sbjct: 73 EILDVGSGAGFPGIILAIFDSSRKYY---LLERSKKKSTFLKMIKLELDLENVKILEY-- 127
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + + I+ RA ++ L +
Sbjct: 128 EIEREKKKYEFITIRAFRSMNEYALVLKNLLKNE 161
>gi|78778556|ref|YP_396668.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. MIT 9312]
gi|78712055|gb|ABB49232.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. MIT 9312]
Length = 233
Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 30/165 (18%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTV-----EDFWIRH-- 58
SN I+ + + +N F +W+K + S S ++ H
Sbjct: 3 SNKIIEKSEVREYFN------------GTGFERWNK---IYSKSDEINTVQKNIRKGHQK 47
Query: 59 -VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
V+D + + +P + +G G + + I+ V+ I + +
Sbjct: 48 TVDDVVSYIKNYPELTKKSFCDAGCGVGSLSIPLLRLGIKDLQVSDISCE--MIKETKKR 105
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+++ A + + Q+ DV+ LD + Y P
Sbjct: 106 IKELALNKAKIKYEVCDLEQLKGLFDVVVC-----LDVFIHYPQP 145
>gi|264678379|ref|YP_003278286.1| tetrahydrofolate dehydrogenase/cyclohydrolase [Comamonas
testosteroni CNB-2]
gi|262208892|gb|ACY32990.1| tetrahydrofolate dehydrogenase/cyclohydrolase [Comamonas
testosteroni CNB-2]
Length = 300
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ + S +D HV + + G ++ SI + + G +I
Sbjct: 126 IETISPAKDVDGFHVASAGALMVGEVGFKACTPY----GCMKMLESIGMKDLRGRHAVVI 181
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
N + ++ A V + M D+I A A+ +D L
Sbjct: 182 GRSNIVGKPMAMMLLAANATVTVTHSGTADLAAMTRQADIIVA-AVGKVDVL 232
>gi|160899417|ref|YP_001564999.1| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/
5,10-methylene-tetrahydrofolate cyclohydrolase [Delftia
acidovorans SPH-1]
gi|226704343|sp|A9BWT7|FOLD_DELAS RecName: Full=Bifunctional protein FolD; Includes: RecName:
Full=Methylenetetrahydrofolate dehydrogenase; Includes:
RecName: Full=Methenyltetrahydrofolate cyclohydrolase
gi|160365001|gb|ABX36614.1| Methenyltetrahydrofolate cyclohydrolase [Delftia acidovorans SPH-1]
Length = 284
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 6/119 (5%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ + S ++D HV + + G ++ SI + + G +I
Sbjct: 110 IETISPLKDVDGFHVASAGALMVGEVGFKACTPY----GCMKMLESIGMKDLRGKHAVVI 165
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL-LEYSFP 162
N + ++ A + + M D++ A A+ + L + P
Sbjct: 166 GRSNIVGKPMAMMLLAANATVTICHSGTADLAAMTRQADIVVA-AVGKRNVLTADMCKP 223
>gi|87307525|ref|ZP_01089669.1| phosphatidylethanolamine N-methyltransferase [Blastopirellula
marina DSM 3645]
gi|87289695|gb|EAQ81585.1| phosphatidylethanolamine N-methyltransferase [Blastopirellula
marina DSM 3645]
Length = 250
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
++L +D+G+G G I + G ++ + S +
Sbjct: 43 LEALSQATHKCDIRRALDMGTGPGTIAQIWAEL-----GYETTGVDFSSTMLSAAQQAAT 97
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ ++ + P + D++S+RAL
Sbjct: 98 RRGLSIELIEADAEYPPFEPESFDLVSSRAL 128
>gi|229133024|ref|ZP_04261865.1| Methyltransferase type 12 [Bacillus cereus BDRD-ST196]
gi|228650442|gb|EEL06436.1| Methyltransferase type 12 [Bacillus cereus BDRD-ST196]
Length = 295
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 38/133 (28%), Gaps = 7/133 (5%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
W+ K L D + S V + + G G+ + + +
Sbjct: 8 DWNSK--LTYLKNTRDLYYNDDYLSFLVNTVWKISEPVHIVDYGCGYGYLGLVLLPLLPK 65
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL----ADL 153
G I+S + R + + + E + D+ +A +
Sbjct: 66 GSKYTGIDSGEALIAEARELFRSLPYESEFIEGDATEIE-LENKYDIAICQAFLLHMSSP 124
Query: 154 DTLLEYSFPWLYQ 166
T+LE + Q
Sbjct: 125 KTMLEKMIHSIKQ 137
>gi|118475601|ref|YP_891617.1| fumarate reductase flavoprotein subunit [Campylobacter fetus subsp.
fetus 82-40]
gi|118414827|gb|ABK83247.1| fumarate reductase flavoprotein subunit [Campylobacter fetus subsp.
fetus 82-40]
Length = 662
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSST-VEDFWIRHV 59
+YCD N I L + + K E + L K N+ ++D HV
Sbjct: 431 QYCDENEIDIQTQTLEKF------VNKTESYLKELLNKDGKYNVFEIKNKMKDIMWEHV 483
>gi|114561907|ref|YP_749420.1| modification methylase, HemK family protein [Shewanella
frigidimarina NCIMB 400]
gi|114333200|gb|ABI70582.1| modification methylase, HemK family protein [Shewanella
frigidimarina NCIMB 400]
Length = 284
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/139 (10%), Positives = 38/139 (27%), Gaps = 20/139 (14%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFW---------------IRHVEDSLRVFQLH 69
T E+ + + + K + +FW + +
Sbjct: 55 TSEQFKAYSQMIAKRQSGTPVAHIIGEREFWSLPFIVNESTLIPRPDTEILVETALNLSV 114
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+ + +DLG+G G + + + + I+ + + ++
Sbjct: 115 RHNAKVLDLGTGTGAIALALASERPKWR---ITAIDKVPEAVELAKANRGNLNLTEVEII 171
Query: 129 ACRIQEAPQMITTCDVISA 147
A + D+I +
Sbjct: 172 QSDWFSAVEQR-DFDLIVS 189
>gi|299532224|ref|ZP_07045618.1| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/
5,10-methylene-tetrahydrofolate cyclohydrolase
[Comamonas testosteroni S44]
gi|298719886|gb|EFI60849.1| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/
5,10-methylene-tetrahydrofolate cyclohydrolase
[Comamonas testosteroni S44]
Length = 284
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ + S +D HV + + G ++ SI + + G +I
Sbjct: 110 IETISPAKDVDGFHVASAGALMVGEVGFKACTPY----GCMKMLESIGMKDLRGKHAVVI 165
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
N + ++ A V + M D+I A A+ +D L
Sbjct: 166 GRSNIVGKPMAMMLLAANATVTVAHSGTADLAAMTRQADIIVA-AVGKVDVL 216
>gi|260588999|ref|ZP_05854912.1| SmtA protein [Blautia hansenii DSM 20583]
gi|260540778|gb|EEX21347.1| SmtA protein [Blautia hansenii DSM 20583]
Length = 260
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 6/98 (6%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
ED W + S +D+G+G GF II S G + ++S
Sbjct: 38 WEDIWANELI-SYFPKGEVCSKMKILDIGTGPGFYSIILS-----KRGYQMTAVDSSEGM 91
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
++ + A + Q+ T DVI R
Sbjct: 92 LEEAKHNAGELADNIEFLCMDAQKLDFEDNTFDVIVTR 129
>gi|207092963|ref|ZP_03240750.1| glucose-inhibited division protein B [Helicobacter pylori
HPKX_438_AG0C1]
Length = 78
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ E Q + D+I++RA+A L+E S +L K
Sbjct: 2 KKRLEDYQNLLQVDLITSRAVASSSFLIERSQRFLKDK 39
>gi|221067197|ref|ZP_03543302.1| Methylenetetrahydrofolate dehydrogenase (NADP(+)) [Comamonas
testosteroni KF-1]
gi|220712220|gb|EED67588.1| Methylenetetrahydrofolate dehydrogenase (NADP(+)) [Comamonas
testosteroni KF-1]
Length = 284
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ + S +D HV + + G ++ SI + + G +I
Sbjct: 110 IETISPAKDVDGFHVASAGALMVGEVGFKACTPY----GCMKMLESIGMKDLRGKHAVVI 165
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
N + ++ A V + M D+I A A+ +D L
Sbjct: 166 GRSNIVGKPMAMMLLAANATVTVTHSGTADLGAMTRQADIIVA-AVGKVDVL 216
>gi|300769799|ref|ZP_07079679.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300763250|gb|EFK60066.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 285
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 47/143 (32%), Gaps = 19/143 (13%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSST-------VEDFW-------IRHVEDSLRVF 66
V+ E +L+ L+ +++ + V +F V +
Sbjct: 51 VTEEQKIQLDRILQELLRRKPIQHILKKADFYGEIFEVNEFVLIPRPETEELVHLIIGHH 110
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ P ID+G+G G +I + S V+ ++ + + + +K
Sbjct: 111 RSSAVPLKIIDIGTGSGCIPVILKKHMPS---AHVSALDISKEAIAVAKRNAKKLGTDIH 167
Query: 127 VFACRIQEAPQMITT--CDVISA 147
I E + T D+I +
Sbjct: 168 FVNADILEWEYLFTEQLYDIIVS 190
>gi|331001218|ref|ZP_08324844.1| protein-(glutamine-N5) methyltransferase [Parasutterella
excrementihominis YIT 11859]
gi|329568945|gb|EGG50741.1| protein-(glutamine-N5) methyltransferase [Parasutterella
excrementihominis YIT 11859]
Length = 247
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 32/103 (31%), Gaps = 10/103 (9%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ S E +E P ++ DLG+G G +++ + V
Sbjct: 63 LIPRSDTECLVEWLIEHL-------PKNALVCDLGTGSGCIAATVALERPDL---TVWAS 112
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + A K+ + + D + +
Sbjct: 113 DLSESALAVAQANCKALGADVKLVQGSWLDPYPAELSFDAVIS 155
>gi|303256164|ref|ZP_07342180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Burkholderiales bacterium 1_1_47]
gi|302860893|gb|EFL83968.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Burkholderiales bacterium 1_1_47]
Length = 267
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 32/103 (31%), Gaps = 10/103 (9%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ S E +E P ++ DLG+G G +++ + V
Sbjct: 83 LIPRSDTECLVEWLIEHL-------PKNALVCDLGTGSGCIAATVALERPDL---TVWAS 132
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + A K+ + + D + +
Sbjct: 133 DLSESALAVAQANCKALGADVKLVQGSWLDPYPAELSFDAVIS 175
>gi|51598438|ref|YP_072626.1| glucose inhibited division protein B [Borrelia garinii PBi]
gi|81610175|sp|Q662I7|RSMG_BORGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51573009|gb|AAU07034.1| glucose inhibited division protein B [Borrelia garinii PBi]
Length = 208
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR--HVEDSLR--VFQLHPYPS 73
+ + + L+K+ + L + + NL+S+S I HV DSL PS
Sbjct: 13 NFQFAYKDLQKINLYIKRILLLNTRFNLISNSNSNFNSILNLHVIDSLLGLPTIKEINPS 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+GSG GFPGI+ +I +S + L+E KK++FL+ + +
Sbjct: 73 EILDVGSGSGFPGIVLAIFDTSRKYY---LLERSKKKSTFLKMIKLELDLENVKILEY-- 127
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + + I+ RA ++ L
Sbjct: 128 EIEREKKKYEFITIRAFRSMNEYALVLKNLLKN 160
>gi|196228092|ref|ZP_03126959.1| Methyltransferase type 11 [Chthoniobacter flavus Ellin428]
gi|196227495|gb|EDY21998.1| Methyltransferase type 11 [Chthoniobacter flavus Ellin428]
Length = 259
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
V + +R Q+ + +E P + D++++R +A
Sbjct: 67 HQVTCTDLAAPMLDRVREAAQERGLSVETRQHPAEEFPYAEASFDLVTSR-VAP 119
>gi|237750886|ref|ZP_04581366.1| LOW QUALITY PROTEIN: ribosomal RNA small subunit methyltransferase
G [Helicobacter bilis ATCC 43879]
gi|229373331|gb|EEO23722.1| LOW QUALITY PROTEIN: ribosomal RNA small subunit methyltransferase
G [Helicobacter bilis ATCC 43879]
Length = 122
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVI 145
I I L+E + K+ SFL + KV A + D+I
Sbjct: 4 IPALILACYYTDSKFYLLEPRKKRVSFLENAIISMGLSHVKVIADYSYNIKDIKG--DLI 61
Query: 146 SARALADLDTLLEYSFPWL 164
++RA+ D L+ S L
Sbjct: 62 TSRAVCRSDILVRDSRHLL 80
>gi|295443078|ref|NP_594825.2| type I protein arginine N-methyltransferase Rmt1
[Schizosaccharomyces pombe 972h-]
gi|259016193|sp|Q9URX7|ANM1_SCHPO RecName: Full=Probable protein arginine N-methyltransferase
gi|254745569|emb|CAB63498.2| type I protein arginine N-methyltransferase Rmt1
[Schizosaccharomyces pombe]
Length = 340
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 7/118 (5%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+Y++ + W ++ +D D++ I +D+G G G +
Sbjct: 17 DYYFDSYSHWGIHEEMLK----DDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFC 72
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + KA + V K + R + +++E + D+I +
Sbjct: 73 A--RAGAKHVYGVDMSEIIHKAVQIVE-VNKLSDRITLIQGKMEEIQLPVEKVDIIVS 127
>gi|255581738|ref|XP_002531671.1| conserved hypothetical protein [Ricinus communis]
gi|223528702|gb|EEF30715.1| conserved hypothetical protein [Ricinus communis]
Length = 843
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 6/81 (7%)
Query: 13 NYLLNTYNVSRETLEK---LEYFYFLFLKWSKKINLVS---SSTVEDFWIRHVEDSLRVF 66
+ L N SR L K LE F+ ++ N+ S + I HV
Sbjct: 130 DNLAWHSNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMIISILIFHVLFIYLTS 189
Query: 67 QLHPYPSIWIDLGSGGGFPGI 87
+ +D+ + G
Sbjct: 190 YILXPDHFILDMCAAPGSKTF 210
>gi|219685817|ref|ZP_03540626.1| methyltransferase GidB [Borrelia garinii Far04]
gi|219672650|gb|EED29680.1| methyltransferase GidB [Borrelia garinii Far04]
Length = 208
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR--HVEDSLR--VFQLHPYPS 73
+ + + L+K+ + L + + NL+S+S I HV DSL PS
Sbjct: 13 NFQFAYKDLQKINLYIKRILLLNTRFNLISNSNSNFNSILNLHVIDSLLGLSTIKEINPS 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+GSG GFPGI+ +I +S + L+E KK++FL+ + +
Sbjct: 73 EILDVGSGAGFPGIVLAIFDTSRKYY---LLERSKKKSTFLKMIKLELDLENVKILEY-- 127
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + + I+ RA ++ L
Sbjct: 128 EIEREKKKYEFITIRAFRSMNEYALVLKNLLKN 160
>gi|219684672|ref|ZP_03539615.1| methyltransferase GidB [Borrelia garinii PBr]
gi|219672034|gb|EED29088.1| methyltransferase GidB [Borrelia garinii PBr]
Length = 208
Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR--HVEDSLR--VFQLHPYPS 73
+ + + L+K+ + L + + NL+S+S I HV DSL PS
Sbjct: 13 NFQFAYKDLQKINLYIKRILLLNTRFNLISNSNSNFNSILNLHVIDSLLGLSTIKEINPS 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+GSG GFPGI+ +I +S + L+E KK++FL+ + +
Sbjct: 73 EILDVGSGAGFPGIVLAIFDTSRKYY---LLERSKKKSTFLKMIKLELDLENVKILEY-- 127
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + + I+ RA ++ L
Sbjct: 128 EIEREKKKYEFITIRAFRSMNEYALVLKNLLKN 160
>gi|123967723|ref|YP_001008581.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. AS9601]
gi|123197833|gb|ABM69474.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. AS9601]
Length = 233
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 53/165 (32%), Gaps = 30/165 (18%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTV-----EDFWIRH-- 58
SN I+ + + +N F +W+K + S S ++ H
Sbjct: 3 SNKIIEKSEVREYFN------------GTGFERWNK---IYSKSDEINTVQKNIRKGHQK 47
Query: 59 -VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
V+D + + +P + +G G + + I+ ++ I + +
Sbjct: 48 TVDDVVSYIKNYPELTKKSYCDAGCGVGSLSIPLLRLGIKELQLSDIS--YEMIEETKKR 105
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + + + ++ DV+ LD + Y P
Sbjct: 106 IHELGLSQGKIKYEVCDLEKLKGLFDVVVC-----LDVFIHYPQP 145
>gi|222110848|ref|YP_002553112.1| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/
5,10-methylene-tetrahydrofolate cyclohydrolase
[Acidovorax ebreus TPSY]
gi|254789402|sp|B9MIU6|FOLD_ACIET RecName: Full=Bifunctional protein FolD; Includes: RecName:
Full=Methylenetetrahydrofolate dehydrogenase; Includes:
RecName: Full=Methenyltetrahydrofolate cyclohydrolase
gi|221730292|gb|ACM33112.1| Methenyltetrahydrofolate cyclohydrolase [Acidovorax ebreus TPSY]
Length = 282
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ + S ++D HV + + G ++ SI + + G +I
Sbjct: 110 IEAISPLKDVDGFHVASAGALMVGQVGFKACTPY----GCMKMLESIGMKDLRGKHAVVI 165
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
N + ++ A V + M DV+ A A+ + L
Sbjct: 166 GRSNIVGKPMAMMLLAANATVTVCHSGTADLAAMTRQADVVVA-AVGKRNVL 216
>gi|121594477|ref|YP_986373.1| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/
5,10-methylene-tetrahydrofolate cyclohydrolase
[Acidovorax sp. JS42]
gi|158705706|sp|A1W7S2|FOLD_ACISJ RecName: Full=Bifunctional protein FolD; Includes: RecName:
Full=Methylenetetrahydrofolate dehydrogenase; Includes:
RecName: Full=Methenyltetrahydrofolate cyclohydrolase
gi|120606557|gb|ABM42297.1| 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) /
methenyltetrahydrofolate cyclohydrolase [Acidovorax sp.
JS42]
Length = 282
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ + S ++D HV + + G ++ SI + + G +I
Sbjct: 110 IEAISPLKDVDGFHVASAGALMVGQVGFKACTPY----GCMKMLESIGMKDLRGKHAVVI 165
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
N + ++ A V + M DV+ A A+ + L
Sbjct: 166 GRSNIVGKPMAMMLLAANATVTVCHSGTADLAAMTRQADVVVA-AVGKRNVL 216
>gi|170698892|ref|ZP_02889953.1| Methyltransferase type 11 [Burkholderia ambifaria IOP40-10]
gi|170136215|gb|EDT04482.1| Methyltransferase type 11 [Burkholderia ambifaria IOP40-10]
Length = 282
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 23/87 (26%), Gaps = 11/87 (12%)
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
L G G + +I ++ + + + ++ Q
Sbjct: 53 LDVGCGTGAVTLAIARRLGTHAHCTGVDISARMIAAAQARAERDGLGASFVDADAQTHAF 112
Query: 138 MITTCDVISA-----------RALADL 153
D+I + RA A+L
Sbjct: 113 APDQFDLIVSRFGVMFFDDPVRAFANL 139
>gi|330040660|ref|XP_003239986.1| glucose-inhibited division protein B [Cryptomonas paramecium]
gi|327206912|gb|AEA39088.1| glucose-inhibited division protein B [Cryptomonas paramecium]
Length = 251
Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVED------SLRVFQLHPYPSIWIDLGSGGGFP 85
F L + NL+S+ ++E F+ H+ D +L + +ID+G+G GFP
Sbjct: 63 FIEHVLIRNIYTNLISTRSLEIFYKTHLVDSLTLTSTLSALWIIRKKRFYIDIGTGNGFP 122
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFL-----RYVVQKTAARGKVFACRIQEAPQMIT 140
GII SI L L++ + K + +
Sbjct: 123 GIILSIILPKCFFFLIDPTKKKVNFHYLTLLFLGLKNSKILLLKTNQLCK----IKIFYN 178
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
C +I RA+ + L + F + ++
Sbjct: 179 PCSIILTRAICKIVLLFDICFFLIQKE 205
>gi|289606891|emb|CBI60961.1| unnamed protein product [Sordaria macrospora]
Length = 275
Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 14/47 (29%)
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ Q V E +ISARA+A L L
Sbjct: 1 MAQALGLTNVVVHQAKIEKLAADRPAAIISARAVAKLSALFAIGHRH 47
>gi|229017500|ref|ZP_04174401.1| Methyltransferase type 12 [Bacillus cereus AH1273]
gi|229023713|ref|ZP_04180205.1| Methyltransferase type 12 [Bacillus cereus AH1272]
gi|228737638|gb|EEL88142.1| Methyltransferase type 12 [Bacillus cereus AH1272]
gi|228743824|gb|EEL93925.1| Methyltransferase type 12 [Bacillus cereus AH1273]
Length = 292
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 38/133 (28%), Gaps = 7/133 (5%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
W+ K LV D + S V + + G G+ + +
Sbjct: 5 DWNSK--LVYLRNTRDLYYNDDYLSFLVNTVWKITEPVHIVDYGCGYGYLGLVLLPLLPN 62
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL----ADL 153
G I+S + R + + + E + D+ +A +
Sbjct: 63 GSKYTGIDSGEALIAEARELFRSLPYESEFIKGDAIEIE-LKNKYDIAICQAFLLHMSSP 121
Query: 154 DTLLEYSFPWLYQ 166
T+LE + Q
Sbjct: 122 RTMLEKMIHSIKQ 134
>gi|89097498|ref|ZP_01170387.1| Ubiquinone/menaquinone biosynthesis methyltransferase UBIE
[Bacillus sp. NRRL B-14911]
gi|89087794|gb|EAR66906.1| Ubiquinone/menaquinone biosynthesis methyltransferase UBIE
[Bacillus sp. NRRL B-14911]
Length = 245
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
IE A + + + G V RI++ D++ +R
Sbjct: 69 CASYTGIEGSQNMARLAQK--RMGNSNGTVIHSRIEDYEWEQEKYDLVLSR 117
>gi|270006518|gb|EFA02966.1| hypothetical protein TcasGA2_TC030615 [Tribolium castaneum]
Length = 264
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 10/117 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F L LK S + + T + + D + +++L G G +
Sbjct: 75 FRQLVLKMSPPVFIPRPETEQ------LVDIVLGEIDRKNCRHFLELCCGSGAIALSLLQ 128
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI-TTCDVISA 147
+ I+ ++ + QK ++ + Q A D+I +
Sbjct: 129 ERPQIK---GTALDQSKAACHLTKENAQKAGLNKRIRIIQSQLAQWHRCEKFDIIVS 182
>gi|150389783|ref|YP_001319832.1| methyltransferase type 11 [Alkaliphilus metalliredigens QYMF]
gi|149949645|gb|ABR48173.1| Methyltransferase type 11 [Alkaliphilus metalliredigens QYMF]
Length = 251
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 44/128 (34%), Gaps = 14/128 (10%)
Query: 24 ETLEKLEYFYFLFLKWSKK---INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ L ++E + W+++ +L +ED + + + +D+G+
Sbjct: 2 KKLREIEDY------WNQRARGFSLSVVEELEDDKKDQWLQLFKKYGMTERKLKVLDVGT 55
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G GF ++ + EG V I+ +K + + Q
Sbjct: 56 GSGFFAVLLA-----QEGHDVTGIDYTPNMLKHAEETARKFNVKLDLRQMDAQNLEFEDE 110
Query: 141 TCDVISAR 148
+ D+I R
Sbjct: 111 SFDLIVTR 118
>gi|229011484|ref|ZP_04168672.1| Methyltransferase type 12 [Bacillus mycoides DSM 2048]
gi|228749775|gb|EEL99612.1| Methyltransferase type 12 [Bacillus mycoides DSM 2048]
Length = 295
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 39/143 (27%), Gaps = 12/143 (8%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
LE + W+ K L D + S V + + G G+ +
Sbjct: 3 DLEEY-----DWNSK--LAYLRNTRDLYYNDDYLSFLVNSVWKITDPIHIVDYGCGYGYL 55
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ G I+ + R + + + E + D+ +
Sbjct: 56 GLILLPLLPIGSKYTGIDRGETLIAEARELFRALPYETEFIEGDATEIE-LKNKYDIAVS 114
Query: 148 RAL----ADLDTLLEYSFPWLYQ 166
A + T+LE + Q
Sbjct: 115 HAFLLHMSSPKTMLEKMIHSIKQ 137
>gi|33860728|ref|NP_892289.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633670|emb|CAE18627.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 233
Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 55/156 (35%), Gaps = 14/156 (8%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N L + + +N + + + ++ K S++IN + + V+D +
Sbjct: 4 NKNLEKSEVREYFNGT-----GFDRWRKIYSK-SEEIN-TVQKNIRKGHQKTVDDVVSYV 56
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +P + +G G + + I+ V+ I S+ + + + + +
Sbjct: 57 KNYPELTTKTFCDAGCGVGSLAIPLLRLGIKDLQVSDISSE--MINETKKRINELGLSQR 114
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ Q+ DV+ LD + Y P
Sbjct: 115 KIKFLTSDLEQLKGLFDVVIC-----LDVFIHYPQP 145
>gi|307110906|gb|EFN59141.1| hypothetical protein CHLNCDRAFT_137966 [Chlorella variabilis]
Length = 821
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+IN + + H +L V P +D G+ GF + + + +
Sbjct: 567 RINSTDILVFQQIYRHHYLRALYVLLRDYQPRYILDAGANAGFSTSLFKLLFPN---ATI 623
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
+E + L ++ + +V A + + D
Sbjct: 624 VSLEPDAHNHAALMRNTEEFSDVHRVRAGLWSRQANITQSFD 665
>gi|206563136|ref|YP_002233899.1| putative methyltransferase [Burkholderia cenocepacia J2315]
gi|198039176|emb|CAR55140.1| putative methyltransferase [Burkholderia cenocepacia J2315]
Length = 282
Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 11/87 (12%)
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
L G G + +I I+ + R ++ + +Q
Sbjct: 53 LDVGCGTGAVTLAIARRLGASTQCTGIDISARMIDAARARADRSGLPARFVCADVQTHAF 112
Query: 138 MITTCDVISA-----------RALADL 153
+ D+I + RA A+L
Sbjct: 113 EPASVDLIVSRLGVMFFDDPVRAFANL 139
>gi|332291079|ref|YP_004429688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Krokinobacter diaphorus 4H-3-7-5]
gi|332169165|gb|AEE18420.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Krokinobacter diaphorus 4H-3-7-5]
Length = 288
Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 28/103 (27%), Gaps = 1/103 (0%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ + D F L G G I S+ + V I
Sbjct: 92 LIPRPETEELVDWIITDKAESFVKSETQEKLKILDIGTGSGCIAISL-AKYMSKAHVEAI 150
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + ++ + + ++ D+I +
Sbjct: 151 DISQDALATAYQNAKRNEVDVTFYNQDVLAVEELEHKYDIIVS 193
>gi|89891629|ref|ZP_01203133.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7]
gi|89516176|gb|EAS18839.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7]
Length = 281
Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 8/106 (7%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+ L+ E+ ++D ID+G+G G G+ +V
Sbjct: 89 EHTLIPRQETEELVDMIIKD-----HKTESYLNIIDIGTGTGCIGLSLKAAKPD---CIV 140
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
L++ + + + K + ++ D+I +
Sbjct: 141 TLMDVSEEALATAQSNANHLKTPVKTILQDVLALDELPEKYDIIVS 186
>gi|298387424|ref|ZP_06996976.1| methyl transferase [Bacteroides sp. 1_1_14]
gi|298259631|gb|EFI02503.1| methyl transferase [Bacteroides sp. 1_1_14]
Length = 209
Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 29/97 (29%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ + RH S + W L G G +T + +G + S
Sbjct: 26 LREMNKRHTLLSEWGMSHIVWNKEWNVLDIGCGGGANLTQLMRRCPQGKAYGIDISPESV 85
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + R + + P DV++A
Sbjct: 86 LFAQKKNKKYLSTRCFIEQGTVDTLPYTDEMFDVVTA 122
>gi|29347265|ref|NP_810768.1| putative methyl transferase [Bacteroides thetaiotaomicron VPI-5482]
gi|253572001|ref|ZP_04849406.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|29339164|gb|AAO76962.1| putative methyl transferase [Bacteroides thetaiotaomicron VPI-5482]
gi|251838598|gb|EES66684.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 209
Score = 33.9 bits (76), Expect = 6.7, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 29/97 (29%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ + RH S + W L G G +T + +G + S
Sbjct: 26 LREMNKRHTLLSEWGMSHIVWNKEWNVLDIGCGGGANLTQLMHRCPQGKAYGIDISPESV 85
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + R + + P DV++A
Sbjct: 86 LFAQKKNKKYLSTRCFIEQGTVDTLPYTDEMFDVVTA 122
>gi|71083225|ref|YP_265944.1| hypothetical protein SAR11_0519 [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062338|gb|AAZ21341.1| HemK [Candidatus Pelagibacter ubique HTCC1062]
Length = 280
Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 57/180 (31%), Gaps = 27/180 (15%)
Query: 5 DSNSIL--RANYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSST--VEDFW---- 55
SNSI + +LN V + E L K + K L++ ++F+
Sbjct: 30 LSNSIKRDKKYIILNPKEVLNSEQLRKFKSLIERRKKGEPIAYLINKKEFWKDEFFVNKD 89
Query: 56 -------IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+ + + +D+G+G G + L I+
Sbjct: 90 VLIPRPDSELIIEQVLKIYSKDDHLQLLDIGTGSGCILLSI---LKERSNFYGTGIDISK 146
Query: 109 KKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
K + ++ ++ +V F + D++ + + + + S +L +
Sbjct: 147 KSINVSKFNAKQLNLTNRVKFFHSSVDNFNN--GKYDIVVS----NPPYIEQLSLKYLEK 200
>gi|307176346|gb|EFN65957.1| N(6)-adenine-specific DNA methyltransferase 1 [Camponotus
floridanus]
Length = 233
Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 35/101 (34%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ + S I +E+ L+ P+I +++GSG G ++ L I
Sbjct: 16 VYNPSEDSYLLIDALEEDLQNILYATKPAICLEIGSGSGIVITALAMALKPFHNAHFIAI 75
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
+ + + V + + Q+ T DVI
Sbjct: 76 DINPDACRATKRTSLINSVDVDVLHMNLLDCIQVKNTYDVI 116
>gi|229016798|ref|ZP_04173728.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH1273]
gi|229023003|ref|ZP_04179520.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH1272]
gi|228738309|gb|EEL88788.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH1272]
gi|228744534|gb|EEL94606.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH1273]
Length = 258
Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
G G I + +L+ + V ++ + + + P T
Sbjct: 42 GCGGGIYTKELALMGAKSVVGLDFSKEILQAAKENCKGFP-NISFIHGDAHNIPYPNETF 100
Query: 143 DVISARAL----ADLDTLLEYSFPWLYQ 166
D+I +RA+ D+ + + L +
Sbjct: 101 DLIISRAVIHHLQDIPIFIREASRILKK 128
>gi|148807463|gb|ABR13534.1| phage-related DNA-binding protein [Pseudomonas aeruginosa]
Length = 400
Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSS 49
+K N IL N L V E LE+L + + + + ++
Sbjct: 328 VKMIIENDILTKNQLKEILGVPSEKLEELCALEKGYFQSNDEQKIIDIR 376
>gi|20089875|ref|NP_615950.1| hypothetical protein MA0999 [Methanosarcina acetivorans C2A]
gi|19914826|gb|AAM04430.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
C2A]
Length = 295
Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
W K++ + +S F ++E + P ID G G G+ G+ L +G
Sbjct: 6 WDTKLDYLKTSRYLYFNDDYLEFLIYKVWGFTNPIKIIDFGCGSGYLGLKFLPLLP--KG 63
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
I+ K + + K + +++ DV +AL
Sbjct: 64 STYIGIDKGEKLIEEAKKIFSKLPYDTEFIVSDVEQVQLWEMKYDVAICQAL 115
>gi|91081733|ref|XP_972117.1| PREDICTED: similar to HemK methyltransferase family member 1
[Tribolium castaneum]
Length = 328
Score = 33.9 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 36/117 (30%), Gaps = 10/117 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F L LK S + + T + + D + +++L G G +
Sbjct: 122 FRQLVLKMSPPVFIPRPETEQ------LVDIVLGEIDRKNCRHFLELCCGSGAIALSLLQ 175
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI-TTCDVISA 147
+ I+ ++ + QK ++ + Q A D+I +
Sbjct: 176 ERPQIK---GTALDQSKAACHLTKENAQKAGLNKRIRIIQSQLAQWHRCEKFDIIVS 229
>gi|73667975|ref|YP_303990.1| hypothetical protein Mbar_A0427 [Methanosarcina barkeri str.
Fusaro]
gi|72395137|gb|AAZ69410.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 2/97 (2%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
F ++E + P ID G G G+ G+ L +G I+ K
Sbjct: 21 FNDDYLEFLIYKVWGFTNPIKIIDFGCGLGYLGLKFLPLLP--KGSTYIGIDKGEKLIEE 78
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ + K + +++ DV +AL
Sbjct: 79 AKEIFSKLPYDTEFIVSDVEQVQLWEMKYDVAICQAL 115
>gi|227537350|ref|ZP_03967399.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
methyltransferase [Sphingobacterium spiritivorum ATCC
33300]
gi|227242853|gb|EEI92868.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
methyltransferase [Sphingobacterium spiritivorum ATCC
33300]
Length = 267
Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 50/152 (32%), Gaps = 19/152 (12%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSST-------VEDFW-------IR 57
+ N + V+ E +L+ L+ +++ + V +F
Sbjct: 24 QYTVQNDHVVTEEQKVQLDRILQELLRRKPIQHILKKADFYGEIFEVNEFVLIPRPETEE 83
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
V + + P ID+G+G G +I + + V+ ++ + + +
Sbjct: 84 LVHLIIGHHRSSAVPLKIIDIGTGSGCIPVILKKHVPA---AHVSALDISKEAIAVAKRN 140
Query: 118 VQKTAARGKVFACRIQEAPQMITT--CDVISA 147
+K I E + T D+I +
Sbjct: 141 TKKMETDIHFVNADILEWEYLFTEQLYDIIVS 172
>gi|257438851|ref|ZP_05614606.1| magnesium transporter [Faecalibacterium prausnitzii A2-165]
gi|257198666|gb|EEU96950.1| magnesium transporter [Faecalibacterium prausnitzii A2-165]
Length = 470
Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC----DVISARALADLDTL 156
I + +V++ + + + + D+I ARA L+ L
Sbjct: 150 YICIRRDMTIRQAMSELVKQAGENDNISTLYVVDENEHFYGAIDLKDLIVARAEERLEKL 209
Query: 157 LEYSFPWLYQ 166
+ S+P++
Sbjct: 210 IARSYPYVTD 219
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.315 0.133 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,363,844,307
Number of Sequences: 14124377
Number of extensions: 50363956
Number of successful extensions: 249989
Number of sequences better than 10.0: 2471
Number of HSP's better than 10.0 without gapping: 2171
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 245659
Number of HSP's gapped (non-prelim): 2530
length of query: 168
length of database: 4,842,793,630
effective HSP length: 128
effective length of query: 40
effective length of database: 3,034,873,374
effective search space: 121394934960
effective search space used: 121394934960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 75 (33.5 bits)