HHsearch alignment for GI: 254780808 and conserved domain: PRK04965
>PRK04965 nitric oxide reductase; Provisional.
Probab=98.18 E-value=8.8e-06 Score=60.60 Aligned_cols=105 Identities=24% Similarity=0.375 Sum_probs=61.2
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8763578898894268999999985899--899998076260124667-0022112248999998630399999988631
Q gi|254780808|r 2 INRSYDVIVIGGGHAGCEAAAVAAKLGA--STALITHKTSTIGSMSCN-PAIGGLGKGHLVREIDALDGLMGRVADAAGI 78 (626)
Q Consensus 2 ~~~~~dViVIGaG~AG~EAA~~~Ar~G~--~v~L~~~~~~~~ael~Cn-ps~gg~akg~L~~Ei~aLgg~m~~~aD~~~i 78 (626)
T Consensus 1 M~~~--IVIIG~G~AG~~aa~~lR~~d~~~~Itvi~~e~~----~~Y~rp~Ls-----~~~~-----~~---~~~~~l-- 59 (378)
T PRK04965 1 MSNG--IVIIGSGFAARQLVKNIRKQDAHIPITLITADSG----DEYNKPDLS-----HVFS-----QG---QRADDL-- 59 (378)
T ss_pred CCCC--EEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCC----CCCCCCCCH-----HHHC-----CC---CCHHHH--
T ss_conf 9899--9999882999999999971194986999989999----887678166-----9882-----89---996895--
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHH-HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 48873078785553467878499999999999970899689800-1011202588113222035863344543334664
Q gi|254780808|r 79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG-EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT 156 (626)
Q Consensus 79 ~~r~ln~skGpAv~alraqvDR~~fs~~vt~~l~~~pni~i~~~-eV~~l~~~~~~~~~v~~~~g~~~~~~~viiatGt 156 (626)
T Consensus 60 -----------~~------~~~~--------~~~~~~~I~l~~~~~V~~ID~~~k~V----~~~g~~~~YDkLVLATGa 109 (378)
T PRK04965 60 -----------TR------QSAG--------EFAEQFNLRLFPHTWVTDIDAEAQVV----KSQGNQWQYDKLVLATGA 109 (378)
T ss_pred -----------HC------CCHH--------HHHHHCCEEEECCCEEEEECCCCCEE----EECCCEEECCEEEEECCC
T ss_conf -----------31------7989--------99874897998698999984646379----958919846879993588