HHsearch alignment for GI: 254780808 and conserved domain: PRK05714
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional.
Probab=98.23 E-value=6.5e-06 Score=61.54 Aligned_cols=147 Identities=14% Similarity=0.257 Sum_probs=81.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHCCC----CCCCCCCCCCCHHHHHHHHHHHHH---HHHH-HHHHH
Q ss_conf 357889889426899999998589989999807626012----466700221122489999986303---9999-99886
Q gi|254780808|r 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGS----MSCNPAIGGLGKGHLVREIDALDG---LMGR-VADAA 76 (626)
Q Consensus 5 ~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~~ae----l~Cnps~gg~akg~L~~Ei~aLgg---~m~~-~aD~~ 76 (626)
T Consensus 2 ~~DV~IvGaGpvGl~lAl~L~~~G~~v~lie~~~~~~~~~~~~~~~~~R~~al~~~-s~~~L~~lG~~~~l~~~~~~p~~ 80 (405)
T PRK05714 2 RADLLIVGAGMVGSALALALEGSGLEVLLVDGGPLSVKPFDPQAPFEPRVSALSAA-SQRILERLGAWDGIAARRASPYS 80 (405)
T ss_pred CCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECHH-HHHHHHHCCCHHHHHHHCCCCEE
T ss_conf 98899999059999999999618997899958997778776677898425567799-89999987981656873577612
Q ss_pred HHHHHHHCC-CCC--------CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEE-HHHHCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 314887307-878--------55534678784999999999999708996898-00101120258811322203586334
Q gi|254780808|r 77 GIQFRVLNV-KKG--------PAVRGPRTQADRELYRLAMQREILSQENLDVI-QGEVAGFNTEKNIISSIVMQDNSMIR 146 (626)
Q Consensus 77 ~i~~r~ln~-skG--------pAv~alraqvDR~~fs~~vt~~l~~~pni~i~-~~eV~~l~~~~~~~~~v~~~~g~~~~ 146 (626)
T Consensus 81 ~~--~v~d~~~~~~~~f~~~~~~~~~lg~vv~~~~l~~~L~~~l~~-~~v~~~~~~~v~~~~~~~~~-~~v~l~~g~~i~ 156 (405)
T PRK05714 81 DM--QVWDGSGTGQIHFSAASVHAEVLGHIVENRVVQDALLERLHD-SDIGLLANARLEQMRRSGDD-WLLTLADGRQLR 156 (405)
T ss_pred EE--EEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCEEECCCEEEEEEECCCE-EEEEECCCCEEE
T ss_conf 45--520589862276441014764441123269999999999972-79889848789999983880-799967997986
Q ss_pred CCCCCCCCCC
Q ss_conf 4543334664
Q gi|254780808|r 147 CSTVVLTTGT 156 (626)
Q Consensus 147 ~~~viiatGt 156 (626)
T Consensus 157 a~llVgADG~ 166 (405)
T PRK05714 157 APLVVAADGA 166 (405)
T ss_pred CCEEEECCCC
T ss_conf 3889995899