HHsearch alignment for GI: 254780808 and conserved domain: PRK05945
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.16 E-value=2.2e-10 Score=93.31 Aligned_cols=154 Identities=21% Similarity=0.262 Sum_probs=77.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEECCH-HH----C---CCCCCCCCCC-CCCHHHHHHHH-HHHHH-----
Q ss_conf 357889889426899999998589--9899998076-26----0---1246670022-11224899999-86303-----
Q gi|254780808|r 5 SYDVIVIGGGHAGCEAAAVAAKLG--ASTALITHKT-ST----I---GSMSCNPAIG-GLGKGHLVREI-DALDG----- 67 (626)
Q Consensus 5 ~~dViVIGaG~AG~EAA~~~Ar~G--~~v~L~~~~~-~~----~---ael~Cnps~g-g~akg~L~~Ei-~aLgg----- 67 (626)
T Consensus 3 e~DVLVIGsG~AGl~AA~~a~~~~~~~~V~lv~K~~~~~~~s~~a~gGi~a~~~~~~~~Ds~e~~~~Dt~k~g~~l~d~~ 82 (575)
T PRK05945 3 EHDVVIVGGGLAGCRAALEIARLDPSLDVAVVAKTHPIRSHSVAAQGGIAASLKNVDPQDSWEAHAFDTVKGSDYLADQD 82 (575)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHH
T ss_conf 08989999659999999999987899829999788999972688878899884379999899999999998646888899
Q ss_pred HHHHHHHHHHHHHHHHCC-----CCCC---------CCCC-HHH--HHHHHH--HHHHHHHHHHCCCCCEEEH-HHHCCC
Q ss_conf 999999886314887307-----8785---------5534-678--784999--9999999997089968980-010112
Q gi|254780808|r 68 LMGRVADAAGIQFRVLNV-----KKGP---------AVRG-PRT--QADREL--YRLAMQREILSQENLDVIQ-GEVAGF 127 (626)
Q Consensus 68 ~m~~~aD~~~i~~r~ln~-----skGp---------Av~a-lra--qvDR~~--fs~~vt~~l~~~pni~i~~-~eV~~l 127 (626)
T Consensus 83 lv~~l~~~~~~~v~~Le~~Gv~f~r~~dG~~~~~~~gGhs~~R~~~~~~~tG~~i~~~L~~~~~~~-gv~i~~~~~v~~L 161 (575)
T PRK05945 83 AVAILTQEAPDVIIDLEHLGVLFSRLPDGRIAQRAFGGHSHNRTCYAADKTGHAILHELVNNLRRY-GVTIYDEWYVMRL 161 (575)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCEEEEEEEEEEE
T ss_conf 999999999999999998699776088988801103671025554568883999999999998546-9789941788889
Q ss_pred CCCCCCEEEEEE---CCC--CCCCCCCCCCCCCCCCH
Q ss_conf 025881132220---358--63344543334664310
Q gi|254780808|r 128 NTEKNIISSIVM---QDN--SMIRCSTVVLTTGTFLR 159 (626)
Q Consensus 128 ~~~~~~~~~v~~---~~g--~~~~~~~viiatGtfl~ 159 (626)
T Consensus 162 l~~dg~v~Ga~~~~~~~G~~~~i~AkaVVlATGG~~~ 198 (575)
T PRK05945 162 ILEENEAKGVVMYHIADGRLEVVRAKAVMFATGGYGR 198 (575)
T ss_pred EEECCEEEEEEEEECCCCCEEEEECCEEEECCCCCCC
T ss_conf 8709978999999716883899989989989999877