HHsearch alignment for GI: 254780808 and conserved domain: PRK06452
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.32 E-value=7.7e-12 Score=103.63 Aligned_cols=153 Identities=24% Similarity=0.290 Sum_probs=79.7
Q ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCH----------H--HHHH-HHHHHHH--
Q ss_conf 76357889889426899999998589989999807626012466700221122----------4--8999-9986303--
Q gi|254780808|r 3 NRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGK----------G--HLVR-EIDALDG-- 67 (626)
Q Consensus 3 ~~~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~~ael~Cnps~gg~ak----------g--~L~~-Ei~aLgg-- 67 (626)
T Consensus 3 ~~~~DVlVIG~G~AGl~AAi~a~~~G~~V~lv~K~~~~--~s~s~~a~ggi~a~~~~~~~~~Ds~~~~~~Dt~~~G~~l~ 80 (566)
T PRK06452 3 KLSYDAVIIGAGLAGLMAAHEIASAGYSVAVISKVFPT--RSHSAAAEGGIAAYIPGNSDPNDNPDYMTYDTIKGGDYLV 80 (566)
T ss_pred EEECCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC--CCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 68707899997499999999998779978999788999--9753686682068635799999899999999998546888
Q ss_pred ---HHHHHHHHHHHHHHHHCC-----CCCC----C-----CCC-HHH--HHHHHHH--HHHHHHHHHCCCCCEEEHH-HH
Q ss_conf ---999999886314887307-----8785----5-----534-678--7849999--9999999970899689800-10
Q gi|254780808|r 68 ---LMGRVADAAGIQFRVLNV-----KKGP----A-----VRG-PRT--QADRELY--RLAMQREILSQENLDVIQG-EV 124 (626)
Q Consensus 68 ---~m~~~aD~~~i~~r~ln~-----skGp----A-----v~a-lra--qvDR~~f--s~~vt~~l~~~pni~i~~~-eV 124 (626)
T Consensus 81 d~~~v~~l~~~~~~~i~~L~~~Gv~f~r~~dG~~~~~~~gghs~~R~~~~~d~tG~~i~~~l~~~~~-~~~i~~~~~~~~ 159 (566)
T PRK06452 81 DQDAAELLSYKSGEIVELLERWGALFNRQPDGRVALRYFGGQTYPRTRFVGDKTGMALLHTLYERTS-GLNVDFYNEWFA 159 (566)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHH-CCCCEEEEEEEE
T ss_conf 9999999999899999999983998652899988443347755133574288766899999999986-299789987899
Q ss_pred CCCCCCCCCEEEEEECC---CC--CCCCCCCCCCCCCCC
Q ss_conf 11202588113222035---86--334454333466431
Q gi|254780808|r 125 AGFNTEKNIISSIVMQD---NS--MIRCSTVVLTTGTFL 158 (626)
Q Consensus 125 ~~l~~~~~~~~~v~~~~---g~--~~~~~~viiatGtfl 158 (626)
T Consensus 160 ~~Ll~~~~~v~Gav~~d~~~~~~~~~~AkaVVLATGG~g 198 (566)
T PRK06452 160 WDLVRDEKRVAGVVAMDMRSMEPFFFKAKAVVIASGGMG 198 (566)
T ss_pred EEEEECCCEEEEEEEEECCCCEEEEEECCEEEEECCCCC
T ss_conf 998853986889999976899599998188999178513