HHsearch alignment for GI: 254780808 and conserved domain: PRK12770

>PRK12770 putative glutamate synthase subunit beta; Provisional.
Probab=97.87  E-value=3.7e-05  Score=56.14  Aligned_cols=73  Identities=21%  Similarity=0.173  Sum_probs=48.3

Q ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHHHHHH--CCEEEECCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECC-CHHHHH
Q ss_conf             764543477666898899999987543400--10011000121102354565677654033415662133043-346666
Q gi|254780808|r  302 TDVVYPNGISTALPEEIQHQFIRTIPGLEK--VNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGT-TGYEEA  378 (626)
Q Consensus       302 ~~~~n~vGFqTsL~~~~Q~rv~r~IPGLEn--Aef~R~Gy~ieyd~~~P~~L~~tLe~k~~~~LffAGQI~Gt-eGYeEA  378 (626)
T Consensus       275 D~vlvavG~~P~~~~------------~~~~gv~ld~~G~-I--------~vd~~~~T-svpgIyAaGDv~~g~~~a~~A  332 (350)
T PRK12770        275 DTVITAIGEIPTPPF------------KKELGIELNRDGE-I--------KVDEKHMT-SREGVFAAGDVVTGPSKIGKA  332 (350)
T ss_pred             CEEEEEECCCCCCCH------------HHHCCEEECCCCE-E--------EECCCCEE-CCCCEEEEECCCCCHHHHHHH
T ss_conf             789999777788413------------5415912889981-9--------86989744-899999801687888899999


Q ss_pred             HHHHHHHHHHHHHHCCCC
Q ss_conf             667789999987420334
Q gi|254780808|r  379 AAQGLVAGINSARKSNKL  396 (626)
Q Consensus       379 AAqGl~AGiNa~~~~~~~  396 (626)
T Consensus       333 ~~eG~~AA~~i~~yL~g~  350 (350)
T PRK12770        333 LKSGLRAAQSIHEWLLGK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHCCC
T ss_conf             999999999999987769