HHsearch alignment for GI: 254780808 and conserved domain: PTZ00139

>PTZ00139 succinate dehydrogenase (flavoprotein) subunit; Provisional.
Probab=99.26  E-value=1.6e-10  Score=94.22  Aligned_cols=153  Identities=24%  Similarity=0.281  Sum_probs=78.4

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCC---CCCCH--H---------HHHHHHHHHHH
Q ss_conf             8763578898894268999999985899899998076260124667002---21122--4---------89999986303
Q gi|254780808|r    2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAI---GGLGK--G---------HLVREIDALDG   67 (626)
Q Consensus         2 ~~~~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~~ael~Cnps~---gg~ak--g---------~L~~Ei~aLgg   67 (626)
T Consensus        31 ~~~~yDVlVIGsG~AGL~AAi~a~~~G~~V~lleK~~-----~~~snS~~AqGGInaa~~~~~eDs~e~h~~DTlkaG~~  105 (622)
T PTZ00139         31 IDHTYDAVVVGAGGAGLRAALGLSESGYKTACISKLF-----PTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDW  105 (622)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-----CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             5776587999966999999999997699089997889-----99974899987787406789999989999999986268


Q ss_pred             -----HHHHHHHHHHHHHHHHCC--------CC---------------CCCCCCHHH--HHHHHHH--HHHHHHHHHCCC
Q ss_conf             -----999999886314887307--------87---------------855534678--7849999--999999997089
Q gi|254780808|r   68 -----LMGRVADAAGIQFRVLNV--------KK---------------GPAVRGPRT--QADRELY--RLAMQREILSQE  115 (626)
Q Consensus        68 -----~m~~~aD~~~i~~r~ln~--------sk---------------GpAv~alra--qvDR~~f--s~~vt~~l~~~p  115 (626)
T Consensus       106 l~d~~lv~~l~~~a~~~V~~Le~~Gv~f~r~~~G~~~~r~~Gg~s~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~~  185 (622)
T PTZ00139        106 LGDQDAIHYMCKEAPCAVSELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCCAAADRTGHAMLHTLYGQSLQYN  185 (622)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEECCCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf             77999999999989999999997799722579987812156772034667874157887578619999999999998659


Q ss_pred             CCEEEHHHHCCCCC-CCCCEEEEEEC---CCC--CCCCCCCCCCCCCCCH
Q ss_conf             96898001011202-58811322203---586--3344543334664310
Q gi|254780808|r  116 NLDVIQGEVAGFNT-EKNIISSIVMQ---DNS--MIRCSTVVLTTGTFLR  159 (626)
Q Consensus       116 ni~i~~~eV~~l~~-~~~~~~~v~~~---~g~--~~~~~~viiatGtfl~  159 (626)
T Consensus       186 i~~~~~~~~~~ll~~~~g~v~Gv~~~~~~~g~~~~i~AkaVVLATGG~g~  235 (622)
T PTZ00139        186 CNFFIEYFCLDLIMDEDGCCRGVVAMSIADGTIHRFRSKYTVIATGGYGR  235 (622)
T ss_pred             CEEEEEEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCCCC
T ss_conf             97999889999997589959999999778990999971369987787543