HHsearch alignment for GI: 254780808 and conserved domain: PTZ00318
>PTZ00318 NADH dehydrogenase; Provisional.
Probab=96.54 E-value=0.0087 Score=39.32 Aligned_cols=115 Identities=16% Similarity=0.244 Sum_probs=67.8
Q ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98763578898894268999999985899899998076260124667002211224899999863039999998863148
Q gi|254780808|r 1 MINRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQF 80 (626)
Q Consensus 1 m~~~~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~~ael~Cnps~gg~akg~L~~Ei~aLgg~m~~~aD~~~i~~ 80 (626)
T Consensus 8 ~~Kpr--VVIlGgGfaGl~~ak~L~~~~~~VtLVdp~ny~l----F~PL---------L~qv-AtGtLe~r~-------- 63 (514)
T PTZ00318 8 LLKPN--VVVVGTGWAGCYFARHLNPKLANLHVLSTRNHMV----FTPL---------LPQT-TTGTLEFRS-------- 63 (514)
T ss_pred CCCCE--EEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCC----CCHH---------HHHH-HHCCCCHHH--------
T ss_conf 78885--8999976999999997386898289999999850----1021---------6766-205777577--------
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCEEEEEE----------CCCCCCCCCCC
Q ss_conf 87307878555346787849999999999997089968980010112025881132220----------35863344543
Q gi|254780808|r 81 RVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVM----------QDNSMIRCSTV 150 (626)
Q Consensus 81 r~ln~skGpAv~alraqvDR~~fs~~vt~~l~~~pni~i~~~eV~~l~~~~~~~~~v~~----------~~g~~~~~~~v 150 (626)
T Consensus 64 ---------I~~Pi----------r~i~~~~~~~~~-~f~~~~v~~ID~~~k~V~~~~~~~~~~~~~~~~~~~~l~YD~L 123 (514)
T PTZ00318 64 ---------VCEPI----------TRIQPALAKLPN-RFLRCVVYDVNFDEKQVKCVGVGVVGGSFNAPVNTFSVKYDKL 123 (514)
T ss_pred ---------EECCH----------HHHHHHHCCCCC-EEEEEEEEEEEHHHCEEEEEEECCCCCCCCCCCCCCEECCCEE
T ss_conf ---------22217----------887676513674-5999999887121078999740124665444456636428878
Q ss_pred CCCCCCCCH
Q ss_conf 334664310
Q gi|254780808|r 151 VLTTGTFLR 159 (626)
Q Consensus 151 iiatGtfl~ 159 (626)
T Consensus 124 VlA~Gs~tn 132 (514)
T PTZ00318 124 ILAHGARPN 132 (514)
T ss_pred EECCCCCCC
T ss_conf 986786556