HHsearch alignment for GI: 254780808 and conserved domain: TIGR02023
>TIGR02023 BchP-ChlP geranylgeranyl reductase; InterPro: IPR010253 This entry represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll . It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).; GO: 0045550 geranylgeranyl reductase activity, 0015979 photosynthesis, 0015995 chlorophyll biosynthetic process.
Probab=97.63 E-value=5.5e-05 Score=54.96 Aligned_cols=115 Identities=30% Similarity=0.486 Sum_probs=71.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHC
Q ss_conf 578898894268999999985899899998076260124667002211224899999863039999-9988631488730
Q gi|254780808|r 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGR-VADAAGIQFRVLN 84 (626)
Q Consensus 6 ~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~~ael~Cnps~gg~akg~L~~Ei~aLgg~m~~-~aD~~~i~~r~ln 84 (626)
T Consensus 1 ydV~viGGGPsGA~AAe~LA~~G~~tiLlER~l~~~--KPCGGAI----Pp~li~EFdiP~~li~~r~~~~-----~miS 69 (408)
T TIGR02023 1 YDVAVIGGGPSGAAAAETLARAGIETILLERALSRI--KPCGGAI----PPCLIEEFDIPDDLIDRRVRKA-----RMIS 69 (408)
T ss_pred CCEEEEECCCCHHHHHHHHHHCCCEEEEEEHHHCCC--CCCCCCC----CHHHCCCCCCCHHHHHHHHCEE-----EEEC
T ss_conf 967898168506899999986497488630243265--8888866----5110123578888997320064-----6777
Q ss_pred CC-----CC-----CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCC
Q ss_conf 78-----78-----55534678784999999999999708996898001011202588
Q gi|254780808|r 85 VK-----KG-----PAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKN 132 (626)
Q Consensus 85 ~s-----kG-----pAv~alraqvDR~~fs~~vt~~l~~~pni~i~~~eV~~l~~~~~ 132 (626)
T Consensus 70 P~Gq~~~v~~~~~~P~~~~yVGMVrREvFD~~LReRA~ka-GAe~~~g~f~~~~~d~~ 126 (408)
T TIGR02023 70 PSGQEIAVEIKVDIPVEDGYVGMVRREVFDEYLRERAQKA-GAELIEGLFKKLERDED 126 (408)
T ss_pred CCCCCEECCCEEECCCCCCEEEEEEHHHCCHHHHHHHHHH-HHHHHHHHHHHHCCCCC
T ss_conf 7886100242024365886677755144157899998762-14766567552015677