HHsearch alignment for GI: 254780808 and conserved domain: TIGR02730
>TIGR02730 carot_isom carotene isomerase; InterPro: IPR014101 Members of this family, including sll0033 (crtH) of Synechocystis sp. (strain PCC 6803), catalyse a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization..
Probab=97.26 E-value=0.00031 Score=49.62 Aligned_cols=33 Identities=36% Similarity=0.501 Sum_probs=30.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Q ss_conf 578898894268999999985899899998076
Q gi|254780808|r 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKT 38 (626)
Q Consensus 6 ~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~ 38 (626)
T Consensus 1 yDaiVIGSGIGGLVtAtQLa~KGakvLVLE~Y~ 33 (506)
T TIGR02730 1 YDAIVIGSGIGGLVTATQLAAKGAKVLVLERYL 33 (506)
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 947898168317899999985462255322011