HHsearch alignment for GI: 254780808 and conserved domain: TIGR03143

>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=95.97  E-value=0.011  Score=38.72  Aligned_cols=42  Identities=24%  Similarity=0.434  Sum_probs=32.2

Q ss_pred             HHHHHHCCCEEEEEEEEECCC--HHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             776540334156621330433--4666666778999998742033
Q gi|254780808|r  353 PTLETKKISGLFLAGQINGTT--GYEEAAAQGLVAGINSARKSNK  395 (626)
Q Consensus       353 ~tLe~k~~~~LffAGQI~Gte--GYeEAAAqGl~AGiNa~~~~~~  395 (626)
T Consensus       267 e~m~T-nVpGVyAAGDV~~k~lrQvvTA~~dGaiAA~~aerYi~~  310 (555)
T TIGR03143       267 EDMET-NVPGVYAAGDLRPKELRQVVTAVADGAIAATSAERYVKE  310 (555)
T ss_pred             CCCCC-CCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
T ss_conf             99705-999889883452898773547087579999999999999