HHsearch alignment for GI: 254780808 and conserved domain: TIGR03143
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=95.97 E-value=0.011 Score=38.72 Aligned_cols=42 Identities=24% Similarity=0.434 Sum_probs=32.2
Q ss_pred HHHHHHCCCEEEEEEEEECCC--HHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 776540334156621330433--4666666778999998742033
Q gi|254780808|r 353 PTLETKKISGLFLAGQINGTT--GYEEAAAQGLVAGINSARKSNK 395 (626)
Q Consensus 353 ~tLe~k~~~~LffAGQI~Gte--GYeEAAAqGl~AGiNa~~~~~~ 395 (626)
T Consensus 267 e~m~T-nVpGVyAAGDV~~k~lrQvvTA~~dGaiAA~~aerYi~~ 310 (555)
T TIGR03143 267 EDMET-NVPGVYAAGDLRPKELRQVVTAVADGAIAATSAERYVKE 310 (555)
T ss_pred CCCCC-CCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
T ss_conf 99705-999889883452898773547087579999999999999