BLAST/PSIBLAST alignment of GI: 254780808 and GI: 227823855 at iteration 1
>gi|227823855|ref|YP_002827828.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium fredii NGR234] Length = 627
>gi|227342857|gb|ACP27075.1| tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Sinorhizobium fredii NGR234] Length = 627
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/612 (62%), Positives = 473/612 (77%)
Query: 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDA 64
SYDVIVIGGGHAGCEAA+ AA+LGA TALITHK TIG MSCNPAIGGLGKGHLVREIDA
Sbjct: 3 SYDVIVIGGGHAGCEAASAAARLGARTALITHKKETIGVMSCNPAIGGLGKGHLVREIDA 62
Query: 65 LDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEV 124
LDGLMGRVADAAGIQFR+LN +KGPAVRGPRTQADR LYR AMQREI + ENL VI+G+
Sbjct: 63 LDGLMGRVADAAGIQFRLLNRRKGPAVRGPRTQADRRLYREAMQREIDAIENLLVIEGDA 122
Query: 125 AGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFN 184
TE ++ ++M++ + R + VVLTTGTFL+G+IHIG KIPAGR+G+ PS L
Sbjct: 123 FDLLTEGETVAGVIMKNGQVFRAAAVVLTTGTFLKGLIHIGDRKIPAGRVGEEPSVGLSE 182
Query: 185 SFMKFDFDTGRLKTGTPARLDGKTIIWDKTEKQFADERLIPFSFMTDKITNRQIECGITR 244
+ +F GRLKTGTPARLDG+TI WD+ +Q DE +PFSFMTD I NRQI+CG+TR
Sbjct: 183 TLARFGLKLGRLKTGTPARLDGRTIHWDRVGRQGPDEEPVPFSFMTDTIVNRQIDCGVTR 242
Query: 245 TNLETHRIIMENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNTDV 304
T TH++I +NI SA+YSG I+ GPRYCPSIEDKIVRFGER+GHQIFLEPEGL+ D
Sbjct: 243 TTDATHKLIADNIHRSAMYSGQIEGVGPRYCPSIEDKIVRFGERDGHQIFLEPEGLDDDT 302
Query: 305 VYPNGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLF 364
+YPNGIST+LPEE+Q FIRT+PGLE V+I++PGYAIEYD+++P+EL +L +K GL+
Sbjct: 303 IYPNGISTSLPEEVQEAFIRTVPGLESVSILQPGYAIEYDHVDPRELQLSLAVRKSPGLY 362
Query: 365 LAGQINGTTGYEEAAAQGLVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVLEPY 424
LAGQINGTTGYEEA AQGLVAG+N+A + + FSRTDSYIGVMIDDLTS+G+ EPY
Sbjct: 363 LAGQINGTTGYEEAGAQGLVAGLNAALAAMGREPFVFSRTDSYIGVMIDDLTSRGITEPY 422
Query: 425 RMFTSRAEYRISLRPDNADNRLTPIGMKLGCIGERRQKRFAKYIQEYNFLRSLLKSLVLT 484
RMFTSRAEYR+SLR DNAD RLTP G++LGC+GE R+ RF + + Y+ +LLKSL +T
Sbjct: 423 RMFTSRAEYRLSLRADNADMRLTPTGIELGCVGEARRTRFGSWKRAYDDGHTLLKSLSIT 482
Query: 485 SKNLSSTSISFKQDGKTRTAYEFLSYPDFSIQNLFSICPDARKFSSLVIERLQIESSYAA 544
+ + +DG+ RTA++ L+YPD +I+ L + P V E LQI+++YA
Sbjct: 483 PNEGARYGLKLNRDGQRRTAFDLLAYPDQTIEGLRPLWPQLDAIDPRVSEALQIDAAYAV 542
Query: 545 YTGRQMIEAKEIKFEEKRLIPKDFDYSSLPALSNELKEKLSILKPFNLLQASKIEGMTPA 604
Y RQ + I+ EE IP DFDYS LP LSNELK+KL+ +P NL QA K++GMTPA
Sbjct: 543 YMERQAADIAGIRREESAAIPDDFDYSVLPGLSNELKQKLAQQRPRNLAQAMKVDGMTPA 602
Query: 605 ALNLLLIYIKKN 616
A++LLL ++++
Sbjct: 603 AVSLLLSWLRRQ 614