RPSBLAST alignment for GI: 254780808 and conserved domain: TIGR00137
>gnl|CDD|129243 TIGR00137, gid_trmFO, tRNA:m(5)U-54 methyltransferase. This model represents an orthologous set of proteins present in relatively few bacteria but very tightly conserved where it occurs. It is closely related to gidA (glucose-inhibited division protein A), which appears to be present in all complete eubacterial genomes so far and in Saccharomyces cerevisiae. It was designated gid but is now recognized as a tRNA:m(5)U-54 methyltransferase and is now designated trmFO. Length = 433
Score = 46.4 bits (110), Expect = 2e-05
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 25/130 (19%)
Query: 8 VIVIGGGHAGCEAAAVAAKLGASTALI---------THKTSTIGSMSCNPAIGGL----G 54
V VIGGG AG EAA A+ G L H T + + C+ ++G
Sbjct: 3 VHVIGGGLAGSEAAWQLAQAGVPVILYEMRPEKLTPAHHTEDLAELVCSNSLGAKALDRA 62
Query: 55 KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQ 114
G L E+ L L+ AD + PA G DR ++ ++ ++ S
Sbjct: 63 AGLLKTEMRQLSSLIITAADRHAV----------PA--GGALAVDRGIFSRSLTEQVASH 110
Query: 115 ENLDVIQGEV 124
N+ +I+ EV
Sbjct: 111 PNVTLIREEV 120