HHsearch alignment for GI: 254780809 and conserved domain: COG2262

Probab=99.91  E-value=3e-24  Score=188.04  Aligned_cols=186  Identities=31%  Similarity=0.392  Sum_probs=148.3

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--HC-CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCC
Q ss_conf             33258888640100011212333223455432--02-3024311466318889999855200023454687211000124
Q gi|254780809|r  186 NFSSKEVLNDILFLKNDISSHISQGKLGEIIR--NG-YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDL  262 (440)
Q Consensus       186 ~~~~~~~~~~i~~i~~~l~~ll~~~~~~~~l~--~g-~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~  262 (440)
T Consensus       156 E~drR~ir~rI~~i~~eLe~v~~~R~~~R~~R~~~~~p~vaLvGYTNAGKSTL~N~LT~~~~~-~~d~LFATLdpttR~~  234 (411)
T COG2262         156 ETDRRRIRRRIAKLKRELENVEKAREPRRKKRSRSGIPLVALVGYTNAGKSTLFNALTGADVY-VADQLFATLDPTTRRI  234 (411)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCEE-CCCCCCCCCCCCEEEE
T ss_conf             888999999999999999999987888765331169975898732344499999887245713-0466642105740489


Q ss_pred             CCC-CEEEEEEECCHH-CC-CCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHH------------HCCCCCCCCCC
Q ss_conf             568-358999508100-02-4103566667888998503011020135898566343------------12898532222
Q gi|254780809|r  263 DLE-GYLVKISDTAGI-RE-TDDIVEKEGIKRTFLEVENADLILLLKEINSKKEISF------------PKNIDFIFIGT  327 (440)
Q Consensus       263 ~i~-g~~~~l~DTaGi-r~-t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~~~~~------------~~~~~~i~V~N  327 (440)
T Consensus       235 ~l~~g~~vlLtDTVGFI~~LP~~LV~AF--ksTLEE~~~aDlllhVVDaSdp~~~~~~~~v~~vL~el~~~~~p~i~v~N  312 (411)
T COG2262         235 ELGDGRKVLLTDTVGFIRDLPHPLVEAF--KSTLEEVKEADLLLHVVDASDPEILEKLEAVEDVLAEIGADEIPIILVLN  312 (411)
T ss_pred             EECCCCEEEEECCCCCCCCCCHHHHHHH--HHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf             8079964998657567155986799999--99898762277799974068851899999999999974889997899976


Q ss_pred             CCCCCCCCC-------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf             333446542-------0-0000133332323589999999996322035886320
Q gi|254780809|r  328 KSDLYSTYT-------E-EYDHLISSFTGEGLEELINKIKSILSNKFKKLPFSIP  374 (440)
Q Consensus       328 K~Dl~~~~~-------~-~~~~~ISaktg~Gi~~L~~~I~~~l~~~~~~~~~~i~  374 (440)
T Consensus       313 KiD~~~~~~~~~~~~~~~~~~v~iSA~~~~gl~~L~~~i~~~l~~~~~~~~l~lp  367 (411)
T COG2262         313 KIDLLEDEEILAELERGSPNPVFISAKTGEGLDLLRERIIELLSGLRTEVTLELP  367 (411)
T ss_pred             CCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf             4101573222345663489748998066759899999999986312433489747