HHsearch alignment for GI: 254780809 and conserved domain: COG3640

Probab=94.40  E-value=0.03  Score=35.43  Aligned_cols=88  Identities=27%  Similarity=0.365  Sum_probs=59.0

Q ss_pred             CCCEEEECCCC---CCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEEC-CHHCCCCHHHHHHHHHHHHH
Q ss_conf             23024311466---318889999855200023454687211000124568358999508-10002410356666788899
Q gi|254780809|r  219 GYKIVILGHSN---AGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDT-AGIRETDDIVEKEGIKRTFL  294 (440)
Q Consensus       219 g~~v~i~G~pN---~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DT-aGir~t~d~IE~~GI~ra~~  294 (440)
T Consensus        98 ~~~LLvmGkie~~GeGC~Cp~~allR~--------------~l~-~l~~~~~e~VivDtEAGi-------EHfg----Rg  151 (255)
T COG3640          98 DIDLLVMGKIEEGGEGCACPMNALLRR--------------LLR-HLILNRYEVVIVDTEAGI-------EHFG----RG  151 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCHHHHHHHH--------------HHH-HHHCCCCCEEEEECCCCH-------HHHC----CC
T ss_conf             800799525567997431627899999--------------999-975166748999633456-------6656----56


Q ss_pred             HHHHHCCEEECCCCCCHHH--------HHHHCC-CCCCCCCCCCCCC
Q ss_conf             8503011020135898566--------343128-9853222233344
Q gi|254780809|r  295 EVENADLILLLKEINSKKE--------ISFPKN-IDFIFIGTKSDLY  332 (440)
Q Consensus       295 ~i~~aDlil~v~D~~~~~~--------~~~~~~-~~~i~V~NK~Dl~  332 (440)
T Consensus       152 ~~~~vD~vivVvDpS~~sl~taeri~~L~~elg~k~i~~V~NKv~e~  198 (255)
T COG3640         152 TIEGVDLVIVVVDPSYKSLRTAERIKELAEELGIKRIFVVLNKVDEE  198 (255)
T ss_pred             CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCH
T ss_conf             32578779999578778888899999999871875499999503411