HHsearch alignment for GI: 254780809 and conserved domain: COG4108

Probab=97.65  E-value=0.00016  Score=51.07  Aligned_cols=105  Identities=23%  Similarity=0.327  Sum_probs=73.8

Q ss_pred             CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCE----------EECC----------C---CCCCCCEEEEEEECCH
Q ss_conf             302431146631888999985520002345468721----------1000----------1---2456835899950810
Q gi|254780809|r  220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTR----------DVLT----------I---DLDLEGYLVKISDTAG  276 (440)
Q Consensus       220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTR----------D~i~----------~---~~~i~g~~~~l~DTaG  276 (440)
T Consensus        13 RTFAIISHPDAGKTTlTEkLLlfGgaI--q~AGtVk~rk~~~~a~SDWM~iEkqRGISVtsSVMqF~Y~~~~iNLLDTPG   90 (528)
T COG4108          13 RTFAIISHPDAGKTTLTEKLLLFGGAI--QEAGTVKGRKSGKHAKSDWMEIEKQRGISVTSSVMQFDYADCLVNLLDTPG   90 (528)
T ss_pred             CCEEEEECCCCCCCCHHHHHHHHCCHH--HHCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEEEEEECCCEEEECCCCCC
T ss_conf             403688568888511889999723034--305501222577634227788887568558765787603884886147998


Q ss_pred             HCC-CCHHHHHHHHHHHHHHHHHHCCEEECCCCCC---HHHH-----HHHCCCCCCCCCCCCCCCCCC
Q ss_conf             002-4103566667888998503011020135898---5663-----431289853222233344654
Q gi|254780809|r  277 IRE-TDDIVEKEGIKRTFLEVENADLILLLKEINS---KKEI-----SFPKNIDFIFIGTKSDLYSTY  335 (440)
Q Consensus       277 ir~-t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~---~~~~-----~~~~~~~~i~V~NK~Dl~~~~  335 (440)
T Consensus        91 HeDFSED---------TYRtLtAvDsAvMVIDaAKGiE~qT~KLfeVcrlR~iPI~TFiNKlDR~~rd  149 (528)
T COG4108          91 HEDFSED---------TYRTLTAVDSAVMVIDAAKGIEPQTLKLFEVCRLRDIPIFTFINKLDREGRD  149 (528)
T ss_pred             CCCCCHH---------HHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf             6543236---------7899986410468986035866889999999850598469975023656688