HHsearch alignment for GI: 254780809 and conserved domain: COG5256

>COG5256 TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis].
Probab=98.47  E-value=1.6e-07  Score=71.99  Aligned_cols=108  Identities=28%  Similarity=0.326  Sum_probs=76.9

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCCH------------------------HCCCCC------CCCCCEEECCCCCCCCCEE
Q ss_conf             2302431146631888999985520------------------------002345------4687211000124568358
Q gi|254780809|r  219 GYKIVILGHSNAGKSSLFNALAKKD------------------------VAIVTD------IPGTTRDVLTIDLDLEGYL  268 (440)
Q Consensus       219 g~~v~i~G~pN~GKSSL~N~L~~~~------------------------~aIVs~------~~GTTRD~i~~~~~i~g~~  268 (440)
T Consensus         7 h~nl~~iGHVD~GKSTl~GrLly~~G~id~~tmeK~~~ea~~~gK~sf~fawvlD~tkeERerGvTi~~~~~~fet~k~~   86 (428)
T COG5256           7 HLNLVFIGHVDAGKSTLVGRLLYDLGEIDKRTMEKLEKEAKELGKESFKFAWVLDKTKEERERGVTIDVAHSKFETDKYN   86 (428)
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCEEEEEEEEEEECCCCE
T ss_conf             12899983787870344556577737979899999999998619771689998538866786666899777886437705


Q ss_pred             EEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHH---------------HHHCC-CCCCCCCCCCCCC
Q ss_conf             9995081000241035666678889985030110201358985663---------------43128-9853222233344
Q gi|254780809|r  269 VKISDTAGIRETDDIVEKEGIKRTFLEVENADLILLLKEINSKKEI---------------SFPKN-IDFIFIGTKSDLY  332 (440)
Q Consensus       269 ~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~~~---------------~~~~~-~~~i~V~NK~Dl~  332 (440)
T Consensus        87 ~tIiDaPGHrdF--------vknmItGasqAD~aVLVV~a~~~efE~g~~~~gQtrEH~~La~tlGi~~lIVavNKMD~v  158 (428)
T COG5256          87 FTIIDAPGHRDF--------VKNMITGASQADVAVLVVDARDGEFEAGFGVGGQTREHAFLARTLGIKQLIVAVNKMDLV  158 (428)
T ss_pred             EEEEECCCHHHH--------HHHHHCCHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf             899607846778--------987631331336799999888983101436587516789999856975699999715666


Q ss_pred             CC
Q ss_conf             65
Q gi|254780809|r  333 ST  334 (440)
Q Consensus       333 ~~  334 (440)
T Consensus       159 ~w  160 (428)
T COG5256         159 SW  160 (428)
T ss_pred             CC
T ss_conf             62