HHsearch alignment for GI: 254780809 and conserved domain: KOG0088

>KOG0088 consensus.
Probab=97.92  E-value=8.1e-06  Score=60.16  Aligned_cols=132  Identities=22%  Similarity=0.272  Sum_probs=86.5

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCE--EECCCCCCCCCE--EEEEEECCHHCC--CCHHHHHHHHHHH
Q ss_conf             2302431146631888999985520002345468721--100012456835--899950810002--4103566667888
Q gi|254780809|r  219 GYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTR--DVLTIDLDLEGY--LVKISDTAGIRE--TDDIVEKEGIKRT  292 (440)
Q Consensus       219 g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTR--D~i~~~~~i~g~--~~~l~DTaGir~--t~d~IE~~GI~ra  292 (440)
T Consensus        13 ~FK~VLLGEGCVGKtSLVLRy~EnkF---n~kHlsTlQASF~~kk~n~ed~ra~L~IWDTAGQErfHALGPI--------   81 (218)
T KOG0088          13 KFKIVLLGEGCVGKTSLVLRYVENKF---NCKHLSTLQASFQNKKVNVEDCRADLHIWDTAGQERFHALGPI--------   81 (218)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHCCCCE--------
T ss_conf             26899974875560689999987232---3046789998876330462111311432124445765235753--------


Q ss_pred             HHHHHHHCCEEECCCCCCHHHHHHHC------------CCCCCCCCCCCCCCCCCCHH-------------HHHHHHHHH
Q ss_conf             99850301102013589856634312------------89853222233344654200-------------000133332
Q gi|254780809|r  293 FLEVENADLILLLKEINSKKEISFPK------------NIDFIFIGTKSDLYSTYTEE-------------YDHLISSFT  347 (440)
Q Consensus       293 ~~~i~~aDlil~v~D~~~~~~~~~~~------------~~~~i~V~NK~Dl~~~~~~~-------------~~~~ISakt  347 (440)
T Consensus        82 --YYRgSnGalLVyDITDrdSFqKVKnWV~Elr~mlGnei~l~IVGNKiDLEeeR~Vt~qeAe~YAesvGA~y~eTSAk~  159 (218)
T KOG0088          82 --YYRGSNGALLVYDITDRDSFQKVKNWVLELRTMLGNEIELLIVGNKIDLEEERQVTRQEAEAYAESVGALYMETSAKD  159 (218)
T ss_pred             --EEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHEECCCCC
T ss_conf             --770799628998644468899999999999987188359999537446788642029889999986333431111102


Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             3235899999999963
Q gi|254780809|r  348 GEGLEELINKIKSILS  363 (440)
Q Consensus       348 g~Gi~~L~~~I~~~l~  363 (440)
T Consensus       160 N~Gi~elFe~Lt~~Mi  175 (218)
T KOG0088         160 NVGISELFESLTAKMI  175 (218)
T ss_pred             CCCHHHHHHHHHHHHH
T ss_conf             4379999999999999