HHsearch alignment for GI: 254780809 and conserved domain: KOG0088
>KOG0088 consensus.
Probab=97.92 E-value=8.1e-06 Score=60.16 Aligned_cols=132 Identities=22% Similarity=0.272 Sum_probs=86.5
Q ss_pred CCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCE--EECCCCCCCCCE--EEEEEECCHHCC--CCHHHHHHHHHHH
Q ss_conf 2302431146631888999985520002345468721--100012456835--899950810002--4103566667888
Q gi|254780809|r 219 GYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTR--DVLTIDLDLEGY--LVKISDTAGIRE--TDDIVEKEGIKRT 292 (440)
Q Consensus 219 g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTR--D~i~~~~~i~g~--~~~l~DTaGir~--t~d~IE~~GI~ra 292 (440)
T Consensus 13 ~FK~VLLGEGCVGKtSLVLRy~EnkF---n~kHlsTlQASF~~kk~n~ed~ra~L~IWDTAGQErfHALGPI-------- 81 (218)
T KOG0088 13 KFKIVLLGEGCVGKTSLVLRYVENKF---NCKHLSTLQASFQNKKVNVEDCRADLHIWDTAGQERFHALGPI-------- 81 (218)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHCCCCE--------
T ss_conf 26899974875560689999987232---3046789998876330462111311432124445765235753--------
Q ss_pred HHHHHHHCCEEECCCCCCHHHHHHHC------------CCCCCCCCCCCCCCCCCCHH-------------HHHHHHHHH
Q ss_conf 99850301102013589856634312------------89853222233344654200-------------000133332
Q gi|254780809|r 293 FLEVENADLILLLKEINSKKEISFPK------------NIDFIFIGTKSDLYSTYTEE-------------YDHLISSFT 347 (440)
Q Consensus 293 ~~~i~~aDlil~v~D~~~~~~~~~~~------------~~~~i~V~NK~Dl~~~~~~~-------------~~~~ISakt 347 (440)
T Consensus 82 --YYRgSnGalLVyDITDrdSFqKVKnWV~Elr~mlGnei~l~IVGNKiDLEeeR~Vt~qeAe~YAesvGA~y~eTSAk~ 159 (218)
T KOG0088 82 --YYRGSNGALLVYDITDRDSFQKVKNWVLELRTMLGNEIELLIVGNKIDLEEERQVTRQEAEAYAESVGALYMETSAKD 159 (218)
T ss_pred --EEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHEECCCCC
T ss_conf --770799628998644468899999999999987188359999537446788642029889999986333431111102
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 3235899999999963
Q gi|254780809|r 348 GEGLEELINKIKSILS 363 (440)
Q Consensus 348 g~Gi~~L~~~I~~~l~ 363 (440)
T Consensus 160 N~Gi~elFe~Lt~~Mi 175 (218)
T KOG0088 160 NVGISELFESLTAKMI 175 (218)
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 4379999999999999