HHsearch alignment for GI: 254780809 and conserved domain: KOG0461
>KOG0461 consensus.
Probab=97.76 E-value=9.7e-05 Score=52.67 Aligned_cols=144 Identities=21% Similarity=0.244 Sum_probs=88.2
Q ss_pred CCEEEECCCCCCHHHHHHHHHC--CHHC----CCCCCCCCCEEECCCCCCC---------CCEEEEEEECCHHCCCCHHH
Q ss_conf 3024311466318889999855--2000----2345468721100012456---------83589995081000241035
Q gi|254780809|r 220 YKIVILGHSNAGKSSLFNALAK--KDVA----IVTDIPGTTRDVLTIDLDL---------EGYLVKISDTAGIRETDDIV 284 (440)
Q Consensus 220 ~~v~i~G~pN~GKSSL~N~L~~--~~~a----IVs~~~GTTRD~i~~~~~i---------~g~~~~l~DTaGir~t~d~I 284 (440)
T Consensus 8 ~N~GiLGHvDSGKTtLarals~~~STaAFDk~pqS~eRgiTLDLGFS~~~v~~parLpq~e~lq~tlvDCPGH---asL- 83 (522)
T KOG0461 8 LNLGILGHVDSGKTTLARALSELGSTAAFDKHPQSTERGITLDLGFSTMTVLSPARLPQGEQLQFTLVDCPGH---ASL- 83 (522)
T ss_pred EEEEEEEECCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCEEEEEECCCH---HHH-
T ss_conf 2443574025764899999986314033224875310462674122044135723378766412699717970---889-
Q ss_pred HHHHHHHHHHHHHHHCCEEECCCCCCHHH--------HHHHCCCCCCCCCCCCCCCCCCCH-------------------
Q ss_conf 66667888998503011020135898566--------343128985322223334465420-------------------
Q gi|254780809|r 285 EKEGIKRTFLEVENADLILLLKEINSKKE--------ISFPKNIDFIFIGTKSDLYSTYTE------------------- 337 (440)
Q Consensus 285 E~~GI~ra~~~i~~aDlil~v~D~~~~~~--------~~~~~~~~~i~V~NK~Dl~~~~~~------------------- 337 (440)
T Consensus 84 ----IRtiiggaqiiDlm~lviDv~kG~QtQtAEcLiig~~~c~klvvvinkid~lpE~qr~ski~k~~kk~~KtLe~t~ 159 (522)
T KOG0461 84 ----IRTIIGGAQIIDLMILVIDVQKGKQTQTAECLIIGELLCKKLVVVINKIDVLPENQRASKIEKSAKKVRKTLESTG 159 (522)
T ss_pred ----HHHHHCCHHHHEEEEEEEEHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf ----9999710120013467886101766652145443766446269999501226530245678999999997787457
Q ss_pred ----HHHHHHHHHHH----HHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf ----00001333323----23589999999996322035886
Q gi|254780809|r 338 ----EYDHLISSFTG----EGLEELINKIKSILSNKFKKLPF 371 (440)
Q Consensus 338 ----~~~~~ISaktg----~Gi~~L~~~I~~~l~~~~~~~~~ 371 (440)
T Consensus 160 f~g~~PI~~vsa~~G~~~~~~i~eL~e~l~s~if~P~Rd~~g 201 (522)
T KOG0461 160 FDGNSPIVEVSAADGYFKEEMIQELKEALESRIFEPKRDEEG 201 (522)
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 688885267643787540667899999999762477768888