HHsearch alignment for GI: 254780809 and conserved domain: PRK00089
>PRK00089 era GTP-binding protein Era; Reviewed.
Probab=100.00 E-value=1.9e-33 Score=251.84 Aligned_cols=150 Identities=25% Similarity=0.374 Sum_probs=129.8
Q ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHH
Q ss_conf 43202302431146631888999985520002345468721100012456835899950810002410356666788899
Q gi|254780809|r 215 IIRNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFL 294 (440)
Q Consensus 215 ~l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~ 294 (440)
T Consensus 5 ~~ksG~-VaivG~PNvGKSTL~N~l~~~k~siVS~k~~TTR~~i~gi~~~~~~q~i~iDTpGi~~~~~~l~~~~~~~~~~ 83 (296)
T PRK00089 5 KFKSGF-VAIVGRPNVGKSTLLNALVGQKISIVSPKPQTTRHRIRGIVTEDDAQIIFVDTPGIHKPKRALNRAMNKAAWS 83 (296)
T ss_pred CCCEEE-EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 983799-9999899988899999996896176149599872838999997997999998998667467787899999999
Q ss_pred HHHHHCCEEECCCCCCH---HHHH-----HHCCCCCCCCCCCCCCCCCCCH-------------HHHHHHHHHHHHHHHH
Q ss_conf 85030110201358985---6634-----3128985322223334465420-------------0000133332323589
Q gi|254780809|r 295 EVENADLILLLKEINSK---KEIS-----FPKNIDFIFIGTKSDLYSTYTE-------------EYDHLISSFTGEGLEE 353 (440)
Q Consensus 295 ~i~~aDlil~v~D~~~~---~~~~-----~~~~~~~i~V~NK~Dl~~~~~~-------------~~~~~ISaktg~Gi~~ 353 (440)
T Consensus 84 ai~~aDlil~viD~~~~~~~~d~~i~~~l~~~~kp~ilviNKiDlv~k~~l~~~~~~l~~~~~f~~if~iSA~~~~gi~~ 163 (296)
T PRK00089 84 SLKDVDLVLFVVDADEKIGPGDEFILEKLKKVKTPVILVLNKIDLVDKEELLPLLEELSELMDFAEIVPISALKGDNVDE 163 (296)
T ss_pred HHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
T ss_conf 99759999999857889898899999988874998899954788428988999999998537976599996778889899
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999996322
Q gi|254780809|r 354 LINKIKSILSNK 365 (440)
Q Consensus 354 L~~~I~~~l~~~ 365 (440)
T Consensus 164 L~~~l~~~lp~~ 175 (296)
T PRK00089 164 LLDLIAKYLPEG 175 (296)
T ss_pred HHHHHHHHCCCC
T ss_conf 999999867988