HHsearch alignment for GI: 254780809 and conserved domain: PRK01889

Probab=98.47  E-value=3.2e-07  Score=69.92  Aligned_cols=79  Identities=33%  Similarity=0.405  Sum_probs=49.4

Q ss_pred             HHHHCCCEEEECCCCCCHHHHHHHHHCCHHCC---CCCC----CCCCEEECCCCCCCCCEEEEEEECCHHCCCC-HHHHH
Q ss_conf             43202302431146631888999985520002---3454----6872110001245683589995081000241-03566
Q gi|254780809|r  215 IIRNGYKIVILGHSNAGKSSLFNALAKKDVAI---VTDI----PGTTRDVLTIDLDLEGYLVKISDTAGIRETD-DIVEK  286 (440)
Q Consensus       215 ~l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aI---Vs~~----~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~-d~IE~  286 (440)
T Consensus       190 ~l~~GkT~vl~G~SGVGKSTLiN~L~g~~~~~t~~is~~~~kGRHTTt--~reL~~lp~G-g~lIDTPG~Re~~l~~~~-  265 (353)
T PRK01889        190 WLKPGKTVALLGSSGVGKSTLVNALLGEEVQKTGAVREDDSKGRHTTT--HRELHPLPSG-GLLIDTPGMRELQLWDCE-  265 (353)
T ss_pred             HHHCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCEECCC--EEEEEECCCC-CEEEECCCCCCCCCCCCH-
T ss_conf             863497899977888669999987565345344150003699500124--0689994899-589737986546777848-


Q ss_pred             HHHHHHHHHHH
Q ss_conf             66788899850
Q gi|254780809|r  287 EGIKRTFLEVE  297 (440)
Q Consensus       287 ~GI~ra~~~i~  297 (440)
T Consensus       266 ~~l~~~F~di~  276 (353)
T PRK01889        266 DGVEETFSDIE  276 (353)
T ss_pred             HHHHHHHHHHH
T ss_conf             88999779899