HHsearch alignment for GI: 254780809 and conserved domain: PRK05306

>PRK05306 infB translation initiation factor IF-2; Validated.
Probab=99.21  E-value=5.9e-11  Score=95.83  Aligned_cols=138  Identities=24%  Similarity=0.341  Sum_probs=93.6

Q ss_pred             HHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCC-CCEEECCCCCCC-CCEEEEEEECCHHCCCCHHHHHHHHH
Q ss_conf             5543202302431146631888999985520002345468-721100012456-83589995081000241035666678
Q gi|254780809|r  213 GEIIRNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPG-TTRDVLTIDLDL-EGYLVKISDTAGIRETDDIVEKEGIK  290 (440)
Q Consensus       213 ~~~l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~G-TTRD~i~~~~~i-~g~~~~l~DTaGir~t~d~IE~~GI~  290 (440)
T Consensus       335 ~~~~~r~pvvt~mghvdhgkt~lld~~r~~~v~--~~e~ggitq~iga~~v~~~~~~~itf~dtpgh-------~af~~m  405 (839)
T PRK05306        335 EDLVPRPPVVTIMGHVDHGKTSLLDAIRKTKVA--AGEAGGITQHIGAYQVETENGKKITFLDTPGH-------EAFTAM  405 (839)
T ss_pred             HHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCCCCCCCCEEEEEEEEECCCCEEEEECCCCH-------HHHHHH
T ss_conf             105668988988577467731489998628753--55678755222349999569987998558855-------889999


Q ss_pred             HHHHHHHHHCCEEECCCCCC---HHHHHHH-----CCCCCCCCCCCCCCCCCCCHH-------------------HHHHH
Q ss_conf             88998503011020135898---5663431-----289853222233344654200-------------------00013
Q gi|254780809|r  291 RTFLEVENADLILLLKEINS---KKEISFP-----KNIDFIFIGTKSDLYSTYTEE-------------------YDHLI  343 (440)
Q Consensus       291 ra~~~i~~aDlil~v~D~~~---~~~~~~~-----~~~~~i~V~NK~Dl~~~~~~~-------------------~~~~I  343 (440)
T Consensus       406 r~-rga~~tdi~ilvvaaddgv~pqt~eai~~~~~a~vp~ivaink~d~~~a~~~~v~~~l~~~~~~~e~~gg~~~~v~~  484 (839)
T PRK05306        406 RA-RGAQVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPIIVAINKIDKPGANPDRVKQELTEYGLVPEEWGGDTIFVPV  484 (839)
T ss_pred             HH-CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHCCCCEEEEEE
T ss_conf             86-35765436999997777756778999999997499889997404678898899999999849864542894489981


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             33323235899999999
Q gi|254780809|r  344 SSFTGEGLEELINKIKS  360 (440)
Q Consensus       344 Saktg~Gi~~L~~~I~~  360 (440)
T Consensus       485 sa~~~~~~~~l~e~i~l  501 (839)
T PRK05306        485 SAKTGEGIDELLEAILL  501 (839)
T ss_pred             EECCCCCHHHHHHHHHH
T ss_conf             51578878999999998