HHsearch alignment for GI: 254780809 and conserved domain: PRK09435
>PRK09435 arginine/ornithine transport system ATPase; Provisional.
Probab=99.13 E-value=2.6e-10 Score=91.37 Aligned_cols=159 Identities=21% Similarity=0.249 Sum_probs=98.3
Q ss_pred CCCEEEECCCCCCHHHHHHHHHCC------HHCCC-----CCCCC-----------------------------------
Q ss_conf 230243114663188899998552------00023-----45468-----------------------------------
Q gi|254780809|r 219 GYKIVILGHSNAGKSSLFNALAKK------DVAIV-----TDIPG----------------------------------- 252 (440)
Q Consensus 219 g~~v~i~G~pN~GKSSL~N~L~~~------~~aIV-----s~~~G----------------------------------- 252 (440)
T Consensus 49 a~~iGiTG~pG~GKStli~~l~~~~~~~g~~v~vlavDPsS~~sgGaiLGDr~Rm~~~~~~~~~fiRs~~srg~lgg~~~ 128 (325)
T PRK09435 49 ALRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAVDPSSTRTGGSILGDKTRMERLSRHPNAFIRPSPSSGTLGGVAR 128 (325)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCH
T ss_conf 25997427999868899999999999679858999978999988861010388887614799848840677888677335
Q ss_pred CCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHC----CCCCCCCCCC
Q ss_conf 721100012456835899950810002410356666788899850301102013589856634312----8985322223
Q gi|254780809|r 253 TTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENADLILLLKEINSKKEISFPK----NIDFIFIGTK 328 (440)
Q Consensus 253 TTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~~~~~~~----~~~~i~V~NK 328 (440)
T Consensus 129 ~~~~~~~-~~~a~g~d~i~iETvGvGQ~e~-----------~v~~~~d~~~~~~~p~~GD~~Q~~K~GImEiaDi~vVNK 196 (325)
T PRK09435 129 KTRETML-LCEAAGFDVILVETVGVGQSET-----------AVAGMVDFFLLLQLPGAGDELQGIKKGIMELADLIVINK 196 (325)
T ss_pred HHHHHHH-HHHHCCCCEEEEEECCCCHHHH-----------HHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEC
T ss_conf 4999999-9997799989997067771488-----------998742668888358876088998865775042689977
Q ss_pred CCCCCC----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
Q ss_conf 334465----------------------4200000133332323589999999996322035886320148999999999
Q gi|254780809|r 329 SDLYST----------------------YTEEYDHLISSFTGEGLEELINKIKSILSNKFKKLPFSIPSHKRHLYHLSQT 386 (440)
Q Consensus 329 ~Dl~~~----------------------~~~~~~~~ISaktg~Gi~~L~~~I~~~l~~~~~~~~~~i~~~~Rq~~~L~~a 386 (440)
T Consensus 197 aDgd~~~~A~~t~~e~~~aL~l~~~~~~~W~ppVl~~SA~~g~GI~eL~~~I~~h~~~l~~---sG~l~~rR~~Q~~~wm 273 (325)
T PRK09435 197 ADGDNHTAARRAAAEYRSALRLLRPKDPGWQPPVLTCSALEGEGIDELWQAIEDHRAALTA---SGEFAARRREQQVEWM 273 (325)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHH
T ss_conf 6755658999999999999860788789999998999815899879999999999999997---8869999999999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780809|r 387 VRYLEM 392 (440)
Q Consensus 387 ~~~L~~ 392 (440)
T Consensus 274 ~~~I~e 279 (325)
T PRK09435 274 WEMVEE 279 (325)
T ss_pred HHHHHH
T ss_conf 999999