HHsearch alignment for GI: 254780809 and conserved domain: PRK09563
>PRK09563 rbgA ribosomal biogenesis GTPase; Reviewed.
Probab=99.53 E-value=1.5e-14 Score=120.70 Aligned_cols=61 Identities=33% Similarity=0.419 Sum_probs=51.8
Q ss_pred HHHCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCC
Q ss_conf 3202302431146631888999985520002345468721100012456835899950810002
Q gi|254780809|r 216 IRNGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRE 279 (440)
Q Consensus 216 l~~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~ 279 (440)
T Consensus 118 ~~~~i~v~vvG~PNVGKSSlIN~L~~~k~~~v~~~PG~Tk~~q--~v~l~~-~i~L~DtPGvl~ 178 (282)
T PRK09563 118 RPRAIRAMIIGIPNVGKSTLINRLAGKKIAKTGNRPGVTKSQQ--WIKLGK-GLELLDTPGILW 178 (282)
T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCEEEEE--EEEECC-CEEEECCCCCCC
T ss_conf 6786389997069776799999874770587679654100258--999579-889966887457