HHsearch alignment for GI: 254780809 and conserved domain: PRK12288

>PRK12288 ribosome-associated GTPase; Reviewed.
Probab=95.16  E-value=0.0075  Score=39.58  Aligned_cols=68  Identities=24%  Similarity=0.291  Sum_probs=44.5

Q ss_pred             HHHHHCCEEECCCCCCHHHH---------HHHCCCCCCCCCCCCCCCCCCCHH--------------HHHHHHHHHHHHH
Q ss_conf             85030110201358985663---------431289853222233344654200--------------0001333323235
Q gi|254780809|r  295 EVENADLILLLKEINSKKEI---------SFPKNIDFIFIGTKSDLYSTYTEE--------------YDHLISSFTGEGL  351 (440)
Q Consensus       295 ~i~~aDlil~v~D~~~~~~~---------~~~~~~~~i~V~NK~Dl~~~~~~~--------------~~~~ISaktg~Gi  351 (440)
T Consensus       119 iAANIDqvlIV~A~~P~~~~~liDRyLv~ae~~~I~pvIvlNK~DL~~~~~~~~~~~~l~~Y~~lGY~v~~~Sa~~~~gl  198 (344)
T PRK12288        119 IAANIDQIVIVSAVLPELSLNIIDRYLVACETLGIEPLIVLNKIDLLDDEERPFVNEQLDIYRNIGYRVLMVSSHTGEGL  198 (344)
T ss_pred             EEEECCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH
T ss_conf             79716889999968999897899999999998699779997314408977899999999999867973999736886289


Q ss_pred             HHHHHHHHHHH
Q ss_conf             89999999996
Q gi|254780809|r  352 EELINKIKSIL  362 (440)
Q Consensus       352 ~~L~~~I~~~l  362 (440)
T Consensus       199 ~~L~~~L~~kt  209 (344)
T PRK12288        199 EPLEAALTGRI  209 (344)
T ss_pred             HHHHHHHCCCE
T ss_conf             99999876785