HHsearch alignment for GI: 254780809 and conserved domain: PRK12486
>PRK12486 dmdA putative dimethyl sulfoniopropionate demethylase; Reviewed.
Probab=95.09 E-value=0.079 Score=32.47 Aligned_cols=78 Identities=15% Similarity=0.220 Sum_probs=46.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 61699972738899999987166888875389988754898672069999956779988775399980898788999999
Q gi|254780809|r 18 SAISIIRLSGPSCFQVCEFICKKKKPFPRKASLRYFFGLDGRILDKGLLIVFPSPESFTGEDSAEFHVHGGIAVVNGILE 97 (440)
Q Consensus 18 ~aiaviRiSG~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~~l~~~f~~P~SyTGEDvvEi~~HG~~~i~~~il~ 97 (440)
T Consensus 146 ~~~~~lalqGP~a~~vl~~~~~~~~~~l~~~~~~~~-~~~g~---~~~--i--~RtgyTGE~G~EI~v~~~~-~a~~lw~ 216 (367)
T PRK12486 146 PDVSPLAVQGPKADDLMARVFGESIRDIRFFRFGYF-DFEGH---DLV--V--ARSGYSKQGGFEIYVEGSD-LGMPLWN 216 (367)
T ss_pred CCEEEEEEECCCHHHHHHHHCCCCHHHCCCCCCCEE-EECCE---EEE--E--EEECCCCCCEEEEEECCHH-HHHHHHH
T ss_conf 887889855708499997634787455644546579-99991---799--9--9522367887999953589-9999999
Q ss_pred HHHHHHHH
Q ss_conf 87544320
Q gi|254780809|r 98 ELAKMPNL 105 (440)
Q Consensus 98 ~l~~~~g~ 105 (440)
T Consensus 217 ~L~~a-G~ 223 (367)
T PRK12486 217 ALFEA-GA 223 (367)
T ss_pred HHHHH-CC
T ss_conf 99985-88