HHsearch alignment for GI: 254780809 and conserved domain: PRK13768

Probab=98.43  E-value=4.4e-07  Score=68.95  Aligned_cols=112  Identities=23%  Similarity=0.275  Sum_probs=63.8

Q ss_pred             CCEEEECCCCCCHHHHHHHHH------CCHHCCCCCCCCCC----------EEECC------------------------
Q ss_conf             302431146631888999985------52000234546872----------11000------------------------
Q gi|254780809|r  220 YKIVILGHSNAGKSSLFNALA------KKDVAIVTDIPGTT----------RDVLT------------------------  259 (440)
Q Consensus       220 ~~v~i~G~pN~GKSSL~N~L~------~~~~aIVs~~~GTT----------RD~i~------------------------  259 (440)
T Consensus         3 ~~~~ViGpaGSGKsT~~~~l~~~l~~~~r~~~vvNLDPA~e~~pY~~~iDIRd~i~~~dVM~~~~LGPNGali~~~e~l~   82 (253)
T PRK13768          3 YIVFFLGTAGSGKTTLVGALSDWLEEQGYDVAIVNLDPAVEYLPYKPDIDVREYVSAREIMRKYGLGPNGALIASVDLLL   82 (253)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             18999899999889999999999997699759997898665899998863786178999998819896468999999999


Q ss_pred             -------CCCCCCCEEEEEEECCHHCC--CCHHHHHHHHHHHHHHHHH--HCCEEECCCCC---CHHH----------HH
Q ss_conf             -------12456835899950810002--4103566667888998503--01102013589---8566----------34
Q gi|254780809|r  260 -------IDLDLEGYLVKISDTAGIRE--TDDIVEKEGIKRTFLEVEN--ADLILLLKEIN---SKKE----------IS  315 (440)
Q Consensus       260 -------~~~~i~g~~~~l~DTaGir~--t~d~IE~~GI~ra~~~i~~--aDlil~v~D~~---~~~~----------~~  315 (440)
T Consensus        83 ~~~d~l~~~i~~~~~dY~i~D~PGQiElft~~~~~----~~i~~~L~~~~~~~~v~l~D~~~~~~~~~fiS~~L~a~s~m  158 (253)
T PRK13768         83 TKAEEIKEEIERLDADYVLVDTPGQMELFAFRESG----RYLVEKLSSGSKSLSVYLIDAVLAKDPSDFVSLLLLALSVQ  158 (253)
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCEEEEECCHHH----HHHHHHHHCCCCEEEEEEECHHHHCCHHHHHHHHHHHHHHH
T ss_conf             98999999985158875998268744322234079----99999986368628999845056378879999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCC
Q ss_conf             31289853222233344654
Q gi|254780809|r  316 FPKNIDFIFIGTKSDLYSTY  335 (440)
Q Consensus       316 ~~~~~~~i~V~NK~Dl~~~~  335 (440)
T Consensus       159 ~~l~lP~inVlsK~Dll~~~  178 (253)
T PRK13768        159 LRLGLPQIPVLNKIDLLSEE  178 (253)
T ss_pred             HHCCCCEEEEEEHHHCCCHH
T ss_conf             97399979986768627837