HHsearch alignment for GI: 254780809 and conserved domain: PRK13900
>PRK13900 type IV secretion system ATPase VirB11; Provisional.
Probab=94.86 E-value=0.037 Score=34.76 Aligned_cols=29 Identities=24% Similarity=0.418 Sum_probs=24.5
Q ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHCC
Q ss_conf 54320230243114663188899998552
Q gi|254780809|r 214 EIIRNGYKIVILGHSNAGKSSLFNALAKK 242 (440)
Q Consensus 214 ~~l~~g~~v~i~G~pN~GKSSL~N~L~~~ 242 (440)
T Consensus 155 ~aV~~r~NilI~G~TgSGKTTll~aL~~~ 183 (332)
T PRK13900 155 HAVISKKNIIISGGTSTGKTTFTNAALRE 183 (332)
T ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHC
T ss_conf 99864871999888898899999999835