HHsearch alignment for GI: 254780809 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=100.00 E-value=1.5e-33 Score=252.69 Aligned_cols=144 Identities=31% Similarity=0.408 Sum_probs=126.0
Q ss_pred CEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 02431146631888999985520002345468721100012456835899950810002410356666788899850301
Q gi|254780809|r 221 KIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVEKEGIKRTFLEVENAD 300 (440)
Q Consensus 221 ~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE~~GI~ra~~~i~~aD 300 (440)
T Consensus 1 ~VaIvGrpNVGKStLfN~L~~~~~aIv~~~~G~TRD~~~~~~~~~~~~~~liDT~G~~~~~~~~~~~~~~q~~~ai~~aD 80 (429)
T TIGR03594 1 VVAIVGRPNVGKSTLFNRLTGKRDAIVADTPGVTRDRKYGDAEWGGREFILIDTGGIEEDDDGLDKQIREQAEIAIEEAD 80 (429)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 98999999987899999987886176159899887733799999990799998989898743789999999999998679
Q ss_pred CEEECCCCCC---HHHHH-----HHCCCCCCCCCCCCCCCCCCCHH---------HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1020135898---56634-----31289853222233344654200---------0001333323235899999999963
Q gi|254780809|r 301 LILLLKEINS---KKEIS-----FPKNIDFIFIGTKSDLYSTYTEE---------YDHLISSFTGEGLEELINKIKSILS 363 (440)
Q Consensus 301 lil~v~D~~~---~~~~~-----~~~~~~~i~V~NK~Dl~~~~~~~---------~~~~ISaktg~Gi~~L~~~I~~~l~ 363 (440)
T Consensus 81 lIlfVvD~~~git~~D~~i~~~Lrk~~k~vilviNK~D~~~~~~~~~ef~~LG~~~~i~iSA~h~~Gi~~L~~~i~~~l~ 160 (429)
T TIGR03594 81 VILFVVDGREGLTPEDEEIAKWLRKSGKPVILVANKIDGKKEDAVAAEFYSLGFGEPIPISAEHGRGIGDLLDAILELLP 160 (429)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 99999857768986799999999871997899998346753145699999836898688742046799999999996588
Q ss_pred H
Q ss_conf 2
Q gi|254780809|r 364 N 364 (440)
Q Consensus 364 ~ 364 (440)
T Consensus 161 ~ 161 (429)
T TIGR03594 161 E 161 (429)
T ss_pred C
T ss_conf 6