HHsearch alignment for GI: 254780809 and conserved domain: TIGR03597
>TIGR03597 GTPase_YqeH ribosome biogenesis GTPase YqeH. This family describes YqeH, a member of a larger family of GTPases involved in ribosome biogenesis. Like YqlF, it shows a cyclical permutation relative to GTPases EngA (in which the GTPase domain is duplicated), Era, and others. Members of this protein family are found in a relatively small number of bacterial species, including Bacillus subtilis but not Escherichia coli.
Probab=99.25 E-value=6e-12 Score=102.70 Aligned_cols=61 Identities=43% Similarity=0.614 Sum_probs=48.5
Q ss_pred HHCCCEEEECCCCCCHHHHHHHHHCC-----HHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCCC
Q ss_conf 20230243114663188899998552-----00023454687211000124568358999508100024
Q gi|254780809|r 217 RNGYKIVILGHSNAGKSSLFNALAKK-----DVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRET 280 (440)
Q Consensus 217 ~~g~~v~i~G~pN~GKSSL~N~L~~~-----~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t 280 (440)
T Consensus 152 ~~~~dvyvvG~tNvGKSTliN~Ll~~~~~~~~~~T~S~~PGTTL~~i~i~l~--~-~~~i~DTPGi~~~ 217 (360)
T TIGR03597 152 RNKKDVYVVGVTNVGKSSLINKLLKQNNGDKDVITTSPFPGTTLDLIEIPLD--D-GHSLYDTPGIINS 217 (360)
T ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEECC--C-CCEEECCCCCCCH
T ss_conf 1699589991686658999999987616777723645899853330787538--9-9557457765574