HHsearch alignment for GI: 254780809 and conserved domain: cd01859

>cd01859 MJ1464 MJ1464. This family represents archaeal GTPase typified by the protein MJ1464 from Methanococcus jannaschii. The members of this family show a circular permutation of the GTPase signature motifs so that C-terminal strands 5, 6, and 7 (strands 6 contain the NKxD motif) are relocated to the N terminus.

Probab=99.64  E-value=1.1e-16  Score=135.54  Aligned_cols=57  Identities=30%  Similarity=0.434  Sum_probs=49.4

Q ss_pred             HCCCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHH
Q ss_conf             023024311466318889999855200023454687211000124568358999508100
Q gi|254780809|r  218 NGYKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGI  277 (440)
Q Consensus       218 ~g~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGi  277 (440)
T Consensus       100 ~~~~v~ivG~PNVGKSTLIN~L~~~~~~~v~~~pGtTr~~~~i--~~-~~~~~liDTpGi  156 (156)
T cd01859         100 KEGKVGVVGYPNVGKSSIINALKGRHSASTSPSPGYTKGEQLV--KI-TSKIYLLDTPGV  156 (156)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCEECCEEEE--EE-CCCEEEEECCCC
T ss_conf             6628999814784598999997488137775999807055999--97-998899989099