HHsearch alignment for GI: 254780809 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=99.48 E-value=9.2e-14 Score=115.30 Aligned_cols=135 Identities=24% Similarity=0.329 Sum_probs=89.7
Q ss_pred CEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCC--CEEECCC-------------CCCCC-----CEEEEEEECCHHCCC
Q ss_conf 024311466318889999855200023454687--2110001-------------24568-----358999508100024
Q gi|254780809|r 221 KIVILGHSNAGKSSLFNALAKKDVAIVTDIPGT--TRDVLTI-------------DLDLE-----GYLVKISDTAGIRET 280 (440)
Q Consensus 221 ~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GT--TRD~i~~-------------~~~i~-----g~~~~l~DTaGir~t 280 (440)
T Consensus 2 NiaiiGHvd~GKTTL~~~ll~~tg~i~~~-~~~~~~~D~~~~E~eRgiTi~~~~~~~~~~~~~~~~~~in~iDtPGh~dF 80 (179)
T cd01890 2 NFSIIAHIDHGKSTLADRLLELTGTVSKR-EMKEQVLDSMDLERERGITIKAQTVRLNYKAKDGQEYLLNLIDTPGHVDF 80 (179)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCC-CCCCEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEECCCCCCC
T ss_conf 59999489989899999999985995414-57324416517678638668743368884136787148999989986451
Q ss_pred CHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHH--------HHHHCCCCCCCCCCCCCCCCCCCH--------------H
Q ss_conf 103566667888998503011020135898566--------343128985322223334465420--------------0
Q gi|254780809|r 281 DDIVEKEGIKRTFLEVENADLILLLKEINSKKE--------ISFPKNIDFIFIGTKSDLYSTYTE--------------E 338 (440)
Q Consensus 281 ~d~IE~~GI~ra~~~i~~aDlil~v~D~~~~~~--------~~~~~~~~~i~V~NK~Dl~~~~~~--------------~ 338 (440)
T Consensus 81 ~~--------~~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~p~ivviNKiD~~~ad~~~v~~~i~~~~g~~~~ 152 (179)
T cd01890 81 SY--------EVSRSLAACEGALLLVDATQGVEAQTLANFYLALENNLEIIPVINKIDLPSADPERVKQQIEDVLGLDPS 152 (179)
T ss_pred HH--------HHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 77--------8988997544278998647787374899999998769988999865556778999999999998688976
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00013333232358999999999632
Q gi|254780809|r 339 YDHLISSFTGEGLEELINKIKSILSN 364 (440)
Q Consensus 339 ~~~~ISaktg~Gi~~L~~~I~~~l~~ 364 (440)
T Consensus 153 ~~v~vSA~~g~gv~~Ll~~i~~~ip~ 178 (179)
T cd01890 153 EAILVSAKTGLGVEDLLEAIVERIPP 178 (179)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 74884378897989999999964889