>cd01891 TypA_BipA TypA (tyrosine phosphorylated protein A)/BipA subfamily. BipA is a protein belonging to the ribosome-binding family of GTPases and is widely distributed in bacteria and plants. BipA was originally described as a protein that is induced in Salmonella typhimurium after exposure to bactericidal/permeability-inducing protein (a cationic antimicrobial protein produced by neutrophils), and has since been identified in E. coli as well. The properties thus far described for BipA are related to its role in the process of pathogenesis by enteropathogenic E. coli. It appears to be involved in the regulation of several processes important for infection, including rearrangements of the cytoskeleton of the host, bacterial resistance to host defense peptides, flagellum-mediated cell motility, and expression of K5 capsular genes. It has been proposed that BipA may utilize a novel mechanism to regulate the expression of target genes. In addition, BipA from enteropathogenic E. co

Probab=99.28 E-value=1.4e-11 Score=100.10 Aligned_cols=135 Identities=23% Similarity=0.211 Sum_probs=90.4 Q ss_pred CEEEECCCCCCHHHHHHHHHCCHHCCC---------CC------CCCCCEEECCCCCCCCCEEEEEEECCHHCCCCHHHH Q ss_conf 024311466318889999855200023---------45------468721100012456835899950810002410356 Q gi|254780809|r 221 KIVILGHSNAGKSSLFNALAKKDVAIV---------TD------IPGTTRDVLTIDLDLEGYLVKISDTAGIRETDDIVE 285 (440) Q Consensus 221 ~v~i~G~pN~GKSSL~N~L~~~~~aIV---------s~------~~GTTRD~i~~~~~i~g~~~~l~DTaGir~t~d~IE 285 (440) T Consensus 4 Nv~iiGHvd~GKTTL~~~Ll~~tg~~~~~~~~~~~~~D~~~~E~ergiTI~~~~~~~~~~~~~~n~IDtPGH~dF~~~-- 81 (194) T cd01891 4 NIAIIAHVDHGKTTLVDALLKQSGTFRENEEVEERVMDSNDLERERGITILAKNTAVTYKDTKINIVDTPGHADFGGE-- 81 (194) T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCEEEEEEEEEECCEEEEEEECCCCHHHHHH-- T ss_conf 899990689879999999999748763046521686147588887287633458999989988999989984777778-- Q ss_pred HHHHHHHHHHHHHHCCEEECCCCCCHHH--------HHHHCCCCCCCCCCCCCCCCCCCH-------------------- Q ss_conf 6667888998503011020135898566--------343128985322223334465420-------------------- Q gi|254780809|r 286 KEGIKRTFLEVENADLILLLKEINSKKE--------ISFPKNIDFIFIGTKSDLYSTYTE-------------------- 337 (440) Q Consensus 286 ~~GI~ra~~~i~~aDlil~v~D~~~~~~--------~~~~~~~~~i~V~NK~Dl~~~~~~-------------------- 337 (440) T Consensus 82 ------~~~~~~~~D~ailVVdA~~Gv~~QT~~~l~~a~~~~~~~iv~iNK~D~~~a~~~~v~~ei~~~~~~~~~~~~~~ 155 (194) T cd01891 82 ------VERVLSMVDGVLLLVDASEGPMPQTRFVLKKALELGLKPIVVINKIDRPDARPEEVVDEVFDLFIELGATEEQL 155 (194) T ss_pred ------HHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCC T ss_conf ------98776434467898653789758999999999872997499885645898889999999999998639993335 Q ss_pred -HHHHHHHHHHH----------HHHHHHHHHHHHHHH Q ss_conf -00001333323----------235899999999963 Q gi|254780809|r 338 -EYDHLISSFTG----------EGLEELINKIKSILS 363 (440) Q Consensus 338 -~~~~~ISaktg----------~Gi~~L~~~I~~~l~ 363 (440) T Consensus 156 ~~pii~~SA~~G~~~d~~~~~~~~~~~ll~ai~~~iP 192 (194) T cd01891 156 DFPVLYASAKNGWASLNLEDPSEDLEPLFDTIIEHVP 192 (194) T ss_pred CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCC T ss_conf 8857872565533577886564659999999996588

HHsearch alignment for GI: 254780809 and conserved domain: cd01891