>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans. NOG1 is functionally linked to ribosome biogenesis and found in association with the nuclear pore complexes and identified in many preribosomal complexes. Thus, defects in NOG1 can lead to defects in 60S biogenesis. The S. cerevisiae NOG1 gene is essential for cell viability, and mutations in the predicted G motifs abrogate function. It is a member of the ODN family of GTP-binding proteins that also includes the bacterial Obg and DRG proteins.

Probab=99.96 E-value=1.2e-29 Score=225.44 Aligned_cols=138 Identities=29% Similarity=0.352 Sum_probs=109.4 Q ss_pred CCEEEECCCCCCHHHHHHHHHCCHHCCCCCCCCCCEEECCCCCCCCCEEEEEEECCHHCC-C---CHHHHHHHHHHHHHH Q ss_conf 302431146631888999985520002345468721100012456835899950810002-4---103566667888998 Q gi|254780809|r 220 YKIVILGHSNAGKSSLFNALAKKDVAIVTDIPGTTRDVLTIDLDLEGYLVKISDTAGIRE-T---DDIVEKEGIKRTFLE 295 (440) Q Consensus 220 ~~v~i~G~pN~GKSSL~N~L~~~~~aIVs~~~GTTRD~i~~~~~i~g~~~~l~DTaGir~-t---~d~IE~~GI~ra~~~ 295 (440) T Consensus 1 P~VaivG~pNvGKStL~N~L~g~~~~-v~~~p~TTr~~~~~~~~~~~~~~~liDTpGi~~~~~~~~~~ie~~~~----~~ 75 (168) T cd01897 1 PTLVIAGYPNVGKSSLVNKLTRAKPE-VAPYPFTTKSLFVGHFDYKYLRWQVIDTPGLLDRPLEERNTIEMQAI----TA 75 (168) T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCE-ECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHH----HH T ss_conf 97999889998899999999589860-23758723574368999837276872488655674788889999999----99 Q ss_pred HHH-HCCEEECCCCCCHH------HHH-------HHCCCCCCCCCCCCCCCCCCCH-----------HHHHHHHHHHHHH Q ss_conf 503-01102013589856------634-------3128985322223334465420-----------0000133332323 Q gi|254780809|r 296 VEN-ADLILLLKEINSKK------EIS-------FPKNIDFIFIGTKSDLYSTYTE-----------EYDHLISSFTGEG 350 (440) Q Consensus 296 i~~-aDlil~v~D~~~~~------~~~-------~~~~~~~i~V~NK~Dl~~~~~~-----------~~~~~ISaktg~G 350 (440) T Consensus 76 l~~~~d~il~viD~~~~~~~~~~~~~~l~~~i~~~~~~~p~i~v~NK~Dl~~~~~~~~~~~~~~~~~~~vi~ISA~~g~G 155 (168) T cd01897 76 LAHLRAAVLFLFDPSETCGYSLEEQLSLFEEIKPLFKNKPVIVVLNKIDLLTFEDLSEIEEEEELEGEEVLKISTLTEEG 155 (168) T ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCC T ss_conf 98357768999968876784899999999987765258887999947534581007999999970899889998158969 Q ss_pred HHHHHHHHHHHH Q ss_conf 589999999996 Q gi|254780809|r 351 LEELINKIKSIL 362 (440) Q Consensus 351 i~~L~~~I~~~l 362 (440) T Consensus 156 i~~L~~~i~ell 167 (168) T cd01897 156 VDEVKNKACELL 167 (168) T ss_pred HHHHHHHHHHHC T ss_conf 999999999963

HHsearch alignment for GI: 254780809 and conserved domain: cd01897