HHsearch alignment for GI: 254780809 and conserved domain: cd03221
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=93.94 E-value=0.04 Score=34.53 Aligned_cols=29 Identities=34% Similarity=0.513 Sum_probs=25.2
Q ss_pred HHHCCCEEEECCCCCCHHHHHHHHHCCHH
Q ss_conf 32023024311466318889999855200
Q gi|254780809|r 216 IRNGYKIVILGHSNAGKSSLFNALAKKDV 244 (440)
Q Consensus 216 l~~g~~v~i~G~pN~GKSSL~N~L~~~~~ 244 (440)
T Consensus 23 i~~ge~~~l~G~NGsGKTTl~~~l~G~~~ 51 (144)
T cd03221 23 INPGDRIGLVGRNGAGKSTLLKLIAGELE 51 (144)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 87999999998999849999999848988